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Domain assignment for gi|217956938|ref|YP_002336034.1|NC_011655 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|217956938|ref|YP_002336034.1|NC_011655
Domain Number 1 Region: 1796-2340
Classification Level Classification E-value
Superfamily Acetyl-CoA synthetase-like 3.14e-139
Family Acetyl-CoA synthetase-like 0.000000022
Further Details:      
 
Domain Number 2 Region: 175-520,547-733
Classification Level Classification E-value
Superfamily Acetyl-CoA synthetase-like 4.06e-89
Family Acetyl-CoA synthetase-like 0.00015
Further Details:      
 
Domain Number 3 Region: 1562-1804
Classification Level Classification E-value
Superfamily CoA-dependent acyltransferases 4.67e-61
Family NRPS condensation domain (amide synthase) 0.0098
Further Details:      
 
Domain Number 4 Region: 1379-1556
Classification Level Classification E-value
Superfamily CoA-dependent acyltransferases 2e-42
Family NRPS condensation domain (amide synthase) 0.0084
Further Details:      
 
Domain Number 5 Region: 2404-2681
Classification Level Classification E-value
Superfamily alpha/beta-Hydrolases 5.75e-39
Family Thioesterase domain of polypeptide, polyketide and fatty acid synthases 0.017
Further Details:      
 
Domain Number 6 Region: 964-1177
Classification Level Classification E-value
Superfamily NAD(P)-binding Rossmann-fold domains 2.69e-28
Family Tyrosine-dependent oxidoreductases 0.0047
Further Details:      
 
Domain Number 7 Region: 1278-1351
Classification Level Classification E-value
Superfamily ACP-like 3.53e-17
Family Peptidyl carrier domain 0.004
Further Details:      
 
Domain Number 8 Region: 2328-2396
Classification Level Classification E-value
Superfamily ACP-like 0.00000000000055
Family Peptidyl carrier domain 0.0092
Further Details:      
 
Domain Number 9 Region: 11-101
Classification Level Classification E-value
Superfamily Acetyl-CoA synthetase-like 0.00000000353
Family Acetyl-CoA synthetase-like 0.0012
Further Details:      
 
Domain Number 10 Region: 774-953
Classification Level Classification E-value
Superfamily NAD(P)-binding Rossmann-fold domains 0.000000669
Family Tyrosine-dependent oxidoreductases 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|217956938|ref|YP_002336034.1|NC_011655
Sequence length 2681
Comment linear gramicidin synthetase subunit B [Bacillus cereus AH187 plasmid pAH187_270]
Sequence
MLSTRKNLHANLVRIQGKRVDLKKIERQVAKVSFIEQCAVIARKQDDGEYLLTAFVVSEK
AAAKEELQLLEVLPPKSQIISMSSLPLTKEGTIDRQQLMSLLCITADEEMRLQQSYGKEK
MAITYEEVFRLPNVNHVYDVMKVKETSQKVVSREKQAKEHFAQHIPAYMVGEDLTQFDMS
QEPKTLVEVIHNAAKNYGNHGITFIDEHGKTEFLTYKMILMEAERMLKGLRAFQLQPQDK
IIFQMNNDKVFVITFWACVLGGFIPVPITVPKMFTQRTNEADTLYNIWRALEKPYIVTNE
TLQDSMTQLLDCYDLDAAKYLAFEKIQQEEPDQNWHVAQSEDDAILLFTSGSTGNPKGVV
QKHRSILTREISTSKYNHFSAHDIALNWMPLEHVGGIVMFHIKDTYLGRNQVQVRTQYVL
SEPTRWLDLITTYKATITWAPNFAFALINKEIENGVKGNWDLSSMEFIVNAGEAINGYTA
KKFLQVLSPYGLPEDAMIPVWGMSETCSGVVYNKAFRSDGTKGLFIVDKQSLEGIIQEGN
NVEDTITFVNLGKPIYGVSIRIANQDNETVAEGVIGRLQIKGKNVLEGYYQNEEANKECF
TEDGWYDTGDLAFIKDGCMAITGRGKDIIIINGVNFNGTEIEYVVEQVAGVKTSFVAACA
VRDDQLDTDELAIFYSTMCANDEEIREQIQEIDQTIIEKFGVKASYIIPVEEEEIPKTNI
GKIQRTKLSNQFRLGYYEKLSKEIDILLQNDRTIPAWFYEQGFVRKETEITFNPKETRKI
VIVGESTAFVTTIKRKLEEVGHHCYLVGNREAYLSILKQEEIDDVINLLNYEKQDADGNE
IEKIRNANENGIFFISETIKACGKEKNLRIFTVTNNCEYSNIMKNKYHFGTLDGFSRSVN
LELPNLMCIRIDLDVSENDVNSIIKEIAAIHRDDKVVYREGKRYVDSLQPIDMPLSLQNE
IALIKDGIYVVTGGLGGIGKEVCKLLLQQFSAKLFIVGRTALSTSPTHLASLEELQGFSK
DVHYIDGDLSDAAFVASISAKVEEIWGTELDGILHLAGAGNLEEHWSEIDSHWCTTESKA
YYEEMFAAKVFGTVNLFQLIEGKKDALFLHFSSVNSYFGGASFTAYAAANNFQDTFCQYV
SNQGYKNAICINWSMWYDIGMSRNNTNNELMAEKGFLLLPMKQAVYSLLAVLRTGVNNIF
VGLDASKSNIRKSMKQKKELGLKAIVYHTDEVSDLSIEAKKHVSFLKVDEIPIDEKGCVQ
IGKLQDLHKNVGKTEMFQEPQSEAEKTLAKIWRDVLKANKIGRDSNFFELGGHSINATQL
VSKIYSVCRVRMPLKNVFQYTTLATMARVLEELLVSAVDEVAVTTERIPKILPRTYYDLS
YSQQRIYFLSTMEKETNYYNILGAWDIYGKLDVTLFEKAIQLLMKKHHSLRATFEIVDGK
PVQIIHDDMEIPVQFIDLTVMPEGLRIEEVDELMLKESKRVYNLANGPLMHCTIVKIKEG
EHVLLIGQHHIISDGWSLGIFVKELNEMYDAFVQHKPVAETPSTISIMDFTAWHNSKVDE
DQDDRQYWLQRFEGELPTLELPTDRQRPLLKTYHGDTLSYKVNSQLHQKLKDFSHANGVT
MFMTLLTAYNIMLNKLTNETDIVVGSPVAGRNEPESKDLIGMFVNTLALRSHLGDNPTVD
VLLKQIKQNTLEAYNHQDYPFDKLVDDLDPHRDLSRTPIFQVMMGYMNMPLMVAFREAEV
RERFVRHKVARFDLTLHVFEDEDQMKIFFEYNTDLFDESTIMRWQNHFETLLQEIVSNPT
KRISELNILTNEEKYEILEMNNNSTEYPQHESVAEIFRETKIKHQAKLAITYKDRKLTYA
ELSEKANALAHTLKRRGVAQHDVVGIVAERSPETIIGILAILKVGAIYLPIDPKLPQLTL
QHIWRDSGAKVLLGKNETTVEVGKEVPFVDIEGDKGKQEELVCPISPEDTAYIMYTSGST
GKPKGVMVTHRNIVRLVKNTNFVSLQEQDVLLQTGSLTFDAATFEIWGALLNGLTLHLVE
DYVILDGEALQEEIQQNKATIMWVSAPLFNQLADQNPAMFTGIKQLLIGGDVLSPKHINK
VMDHCAPINIINGYGPTENTTFSTSFVIDQMYQDSIPIGTPIANSSAYILDVHQNIQPIG
VVGELCVGGDGVAKGYVNLEQLTEERFIADPFLKGSTMYRTGDYVKLLPNGNIQYIGRVD
NQVKIRGFRIELEAIMNTLKQCESIKDVIVVVQEQNGYKTLVAYVVGEESLSIETVRAYA
KKHLAEYMVPSQFIFIEEIPLSINGKVQYSKLPKVQEVLHKKVETLLPENRLEEIILRVY
RDVLEKEDFGVTDSFFAYGGDSLLSIQVVSMLKKEEIAVDPKMIFMHTTVRELAKACENR
PVMEETKRTEKDYLIQMREGSEEDSCIIFAPPAGGTVLGYIELARYFEGIGNVYGLQAPG
LYDDEEPTFLDYDELVQVFLRSIEGTYRPGQDYLGGHSLGGHIAFGMCCELIKQGKAPKG
LLILDTTPSLQVVKGAKDEKIAEEDFKMMVLAAGIGNMMGVDPEELKQLSYEEAKTRVVA
VAQKDEKLKTFINETYLDKYLKLQIHSLLMSRTLELEKTQLDIPIKVFKTQFHTEELVER
FDAWHNYTNQACTFIDIPGTHTTMMRLPHVKEVAKKIEEQL
Download sequence
Identical sequences B7I0Z5 Q20CI8
405534.BCAH187_C0023 gi|376258314|ref|YP_005150036.1| WP_000953496.1.18840 WP_000953496.1.24377 WP_000953496.1.27334 WP_000953496.1.32522 WP_000953496.1.33061 WP_000953496.1.43762 WP_000953496.1.47097 WP_000953496.1.48599 WP_000953496.1.51087 WP_000953496.1.52756 WP_000953496.1.55057 WP_000953496.1.79658 WP_000953496.1.82986 WP_000953496.1.8923 gi|217956938|ref|YP_002336034.1| gi|190015609|ref|YP_001967169.1|NC_010924 gi|217956938|ref|YP_002336034.1|NC_011655 gi|376258314|ref|YP_005150036.1|NC_016792

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