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Domain assignment for gi|300697636|ref|YP_003748297.1|NC_014309 from NCBI plasmid sequences

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|300697636|ref|YP_003748297.1|NC_014309
Domain Number 1 Region: 47-167,196-418,452-471
Classification Level Classification E-value
Superfamily Thiolase-like 1.5e-77
Family Thiolase-related 0.00028
Further Details:      
 
Domain Number 2 Region: 575-702,763-857
Classification Level Classification E-value
Superfamily FabD/lysophospholipase-like 2.54e-60
Family FabD-like 0.001
Further Details:      
 
Domain Number 3 Region: 2163-2412
Classification Level Classification E-value
Superfamily CoA-dependent acyltransferases 1.56e-42
Family NRPS condensation domain (amide synthase) 0.039
Further Details:      
 
Domain Number 4 Region: 2999-3242
Classification Level Classification E-value
Superfamily alpha/beta-Hydrolases 2.99e-36
Family Thioesterase domain of polypeptide, polyketide and fatty acid synthases 0.005
Further Details:      
 
Domain Number 5 Region: 1604-1812
Classification Level Classification E-value
Superfamily NAD(P)-binding Rossmann-fold domains 2.11e-27
Family Tyrosine-dependent oxidoreductases 0.00038
Further Details:      
 
Domain Number 6 Region: 1091-1287
Classification Level Classification E-value
Superfamily S-adenosyl-L-methionine-dependent methyltransferases 2.48e-27
Family Spermidine synthase 0.073
Further Details:      
 
Domain Number 7 Region: 1980-2175
Classification Level Classification E-value
Superfamily CoA-dependent acyltransferases 1.22e-23
Family NRPS condensation domain (amide synthase) 0.043
Further Details:      
 
Domain Number 8 Region: 2642-2831
Classification Level Classification E-value
Superfamily S-adenosyl-L-methionine-dependent methyltransferases 3.61e-22
Family tRNA(1-methyladenosine) methyltransferase-like 0.049
Further Details:      
 
Domain Number 9 Region: 1882-1994
Classification Level Classification E-value
Superfamily ACP-like 8.51e-16
Family Acyl-carrier protein (ACP) 0.03
Further Details:      
 
Domain Number 10 Region: 1429-1588
Classification Level Classification E-value
Superfamily NAD(P)-binding Rossmann-fold domains 0.0000000000000165
Family Tyrosine-dependent oxidoreductases 0.017
Further Details:      
 
Domain Number 11 Region: 2916-2985
Classification Level Classification E-value
Superfamily ACP-like 0.00000000366
Family Peptidyl carrier domain 0.0066
Further Details:      
 
Domain Number 12 Region: 700-761
Classification Level Classification E-value
Superfamily Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.00000000863
Family Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.011
Further Details:      
 
Weak hits

Sequence:  gi|300697636|ref|YP_003748297.1|NC_014309
Domain Number - Region: 2409-2474
Classification Level Classification E-value
Superfamily Acetyl-CoA synthetase-like 0.00406
Family Acetyl-CoA synthetase-like 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|300697636|ref|YP_003748297.1|NC_014309
Sequence length 3266
Comment Beta-ketoacyl synthase (PKS) [Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp]
Sequence
MPGPRPRPRRMRLRPPPTNPLSKPSMDKTTPSAPPAADLDALLAAHYPDCEPIAVIGHAC
RFPEADDSDAFWHNLLAGKAGSRRFTRQELLDAGLDAATIDAPNFVNVGTVVRDADAFDA
TLFGYSRQEAESIDPQQRLFLQIVWHALEHAGHAPRSVPHRTGVFGSARVSTYPGKAPLR
IAEVAQVKGLQSLMGNDKDYIATRVAYKLNLRGPALSVQTACSSSLVAVHLACESLRAGE
CDMAVAGGAAVSFPQQAGYLHQPGMIFSPDGCCRPFDTDAQGTFAGNGVGAVVLRRLGDA
LRDGDPVVAVLLGSAVNNDGDRKVGYTAPSAAGQRDAIRDALMLAGIDSTQVGLIEAHGT
GTPLGDPIELEALRGVFHPADAGPRCALGSVKSNLGHLDTAAGIASLLKAVLAVERRAIP
PSLHFARPNPALGLDDSPFYVPTEAQPWNDASRVAGVSSFGIGGTNCHVVVASLPDALRA
AVDAGNPTPPDTGAALLLSAASPAALQRLTLAYADALRQGPARDLLHTALHGRQLDLPYR
LAVPFNAETTAALDAFAAGEDDALVHRGEGEPGQLVWLFTGQGSHWPGMGQALYRQSPAF
AACLDRCFAACDAELEVPLREAMFGERADLLERMEYAQPAIVAFELAMAAHWRALGLEPH
LVIGHSVGEYAAAVVAGHYEIEQVMPLVRLRGALMQRCAGGAMLAAFAGADELVPLAERF
GVDVAAYNGERHLVLSGRNDAIDTLATELAARNVRHARLTVAGAAHSALLDPVLDAFGEA
AARLHAAPGKLPLISTLLGGTLDAERLNAGDYWRRHMREPVRYADALREALARGADVFVE
LGPDAQLTGIGLREAPERARWIASARRQQPALAQTQQALLELYAAGIALRWERVLPSSGR
KVHAPRYPFDTERYWREAEPTLPAPSTVHHDADAALAEGRRVAASAAASLDLPRLTRLYD
CVTQLHAIYVDALVRRCIGARFEQGATALDILRAGRLLPRHRQLLVRLLNACAEDGYYRR
EGDLYAPAPALAVPHAQRDALLRILRDCCEGFDAIADTVARAGDSLYAMMRGDIEPVAVI
FPDSTSSGVEVLYQDFSFGRYFNQIAAGVVTGLVRERRAGPRRHRPFRILEVGGGTGGTT
AWLLPELDGEPNVRYDFTDISPIFTRRAEQKFAGRDYLGYRAFDLQKDARAQGFEAGGYD
LIVAANVIHATQHVGRTLANLAPLLKPGGRLLMREITRPMRLFDFVFGPLVLPLHDEAAR
DGELFLSTARWKAHCIAAGFERVDWLPDDGAPTSGISEHIVLATAPGGAATLAPWLAEDA
DPLLGQPLTDDGVYLADWSDCAGRHAAWQQRLAQSCAELARRHGNGRAVPPIQALETAPA
WLSVVRLRWCGTPLGAARIALDARDEAGAWQPLAVAPAGDGLPAPVPAHGTHYRWRWQAV
SGATPNADGIALHAASASLAGVLRDAGLPIAPHAARRLLVLDTGIRSPHAVGATLLASLS
DADRAPLVVVTRGAWRIDADDCVDPAHRAAWGLLRVAAVEQPERKLAAIDLPPSADWPEL
LPALAALRNDARWLAVRGGHALAQTLTAEPYAAPALPPGSFADARWHIVTGAFGGLGRLS
VRWLARQGARRIALVAPRTPADWPTFQRDVEAQSTCELRWVNCDAADPTQVNTALQALHA
DGGVAGAVHAAGRLDDAPLAALDAGRIAPVLALKADAAQHLRDWLHAHGGRYLLLYSSAA
AALGAPGQGAHALASAYLDGLAEAQASAEAPTVLSVAWGAWGEAGRAADAALQDKLAATG
MGTLSSAEGLWHLEQAVMRGAPYRLAMRVLPERLDAQRRALFDDGATSPRIAGPSEPAAL
AAPVSTQAAAQSADRIDPRDPDAVGRWLAARIAAQLKLDDPARLTPQQDLLRLGLDSLLF
LELRSAIESQLGVKLDAERAYRDMTLTGIARLIAESAPADTDASGPGSAVLVHDAAARFE
PFPLTPIQHAYWIGRTDLIDYGGVACHVLFEWDLRHDTFDLAHLEAAWNALIARHDMLRM
VVDADGRQRILRDVPAYRPQRHDLKHLGADEQARALEHTREALSYRVLPADRWPLFELVV
SELDDTRYRLHMNLDLLLFDVQSFKVMMDDLAGAYRGDTLAPLQITFRDYVLAEQARRDE
AGWQASWRYWQRTLPHLPPAPALPLEPARASHARPRFTTYQARLARADWDTLKRTWQRWG
ATPSAALLALFAQTLERWSRHPDFTLNLTFFNRRPDHPQVAQLIGDFTSVLLIDFALGRA
PTLRQTIETTQERLWQRLAHSQVNGVELMRELSRGREHDPGRPLMPVVFTSMLGMSLDGL
GIDQAMTSLFGDPVHVFTQTPQVWLDHQVMEVDGDLVFSWYCMDDVLAPGAAQAMFDDYR
CLLRGVAAQPERMAQPGLATLRDDGTWRDFGRHRWPLRAEGPEIDLREIEAVLRAHDGVG
DASALPSESGRSLDIAIAAADVRAVPSPAEAPLSLASPLPMPDAAQLAEIDATWRWLEAR
ALHGIARTLHRHDLFAQAGQRHDLDEAQTRLAALPQYRRLVRQWLLALTGRGWLRRDGEA
FVAVRALDAVPEPAEALPPADWSRALGTYLDTCIARHDALFDGTQAPLALLFDDEAVTRA
LYSDNPAIDCLNRSATQIARALGEHAGGLQVLEVGAGTAATTRHLVPALDGRLQAYRFTD
VSTLFLDEARAHFAGQAAFDYALFDINAPVDFDAHPEAGYDLVVAVNVLHDARDVVRSLR
RLGQLLKPCGRLMMIEATERDSALQMASIGFIEGLNGYDDFRTADDQPMLDLPTWRDALE
QAGFSVERAWPEAESSPLRQHLVLARATRTGRLDLRALERDLRARCGDALPPVRLRQCER
IDRYANHDGGPRIEEDAITPSIATVASIAPSRSPEEQAAIEKAVGAVWQALLKCPVDRDS
DFFQCGGDSLIATRMIAQLNRDGLRGASLQALFAQPRLGAFCATLHAPPAPDASADVDVD
AGDCIVPLAHGRDPAHVFVFHASDGELAAYLPLARHLDCRVHGLRAAGTPLPSSLDALAA
RYVQAVRATQAHGPYTLIGWSYGTFVAAEAARVLHADGETVELVLLDPVCRADFDVDPAD
RASLLRLLARGRVAVPLPDRLETLSADEQTACFVRAAQTAGLLPAGASLDEAQRWLQRIG
DLLGLLAQHHAAAPLPIRCLWVSAARRPDRWRPAELDWQGWEAHAERHTLDTDHWALVLD
DARAQRIAGLFRQWRDHHHRPQEKVA
Download sequence
Identical sequences D8P4S2
gi|300697636|ref|YP_003748297.1|NC_014309 gi|300697636|ref|YP_003748297.1|

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