SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for A5GZE4 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  A5GZE4
Domain Number 1 Region: 1713-2158
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 6.67e-141
Family RNA-dependent RNA-polymerase 0.000000000000346
Further Details:      
 
Domain Number 2 Region: 2-330
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 2.74e-139
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.000000000347
Further Details:      
 
Domain Number 3 Region: 364-563,612-828
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 4.66e-130
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.00000000344
Further Details:      
 
Domain Number 4 Region: 860-997
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 7.33e-61
Family Viral cysteine protease of trypsin fold 0.000000189
Further Details:      
 
Domain Number 5 Region: 1511-1700
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 1.53e-51
Family Viral cysteine protease of trypsin fold 0.0000000913
Further Details:      
 
Domain Number 6 Region: 1418-1467
Classification Level Classification E-value
Superfamily Soluble domain of poliovirus core protein 3a 0.0000000000000301
Family Soluble domain of poliovirus core protein 3a 0.0014
Further Details:      
 
Domain Number 7 Region: 1086-1133,1167-1323
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000000101
Family Extended AAA-ATPase domain 0.058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) A5GZE4
Sequence length 2159
Comment (tr|A5GZE4|A5GZE4_9ENTO) Protein 3D {ECO:0000256|RuleBase:RU364118} KW=Complete proteome OX=185906 OS=Human rhinovirus A38. GN= OC=Picornavirales; Picornaviridae; Enterovirus; Rhinovirus A.
Sequence
MGAQVSRQNVGTHSTQNSVSNGSSLNYFNINYFKDAASSGASKLEFSQDPSKFTDPVKDV
LEKGIPTLQSPTVEACGYSDRIIQITRGDSTITSQDVANAVVGYGVWPHYLTSRDATAID
KPSQPDTSSNRFYTLESKTWTSDSKGWWWKLPDALKEMGVFGQNMYYHFLGRSGYTVHVQ
CNSSKFHQGTLIVAMIPEHQLAAAEKGNVTAGYNLTHPGETGRDVGITVREHPNKQPSDD
NWLNFDGTLLGNITIFPHQFINLRSNNSATIIVPYVNAVPMDSMLRHNNWSLVIIPICPL
EVSSPGSNSIPITVSISPMFAEFSGARARSQGLPTMMTPGSGQFMTTDDFQSPCALPWFH
PTKEISIPGEVKNLIELCQVDTMIPINNVGNNTKSVDMYTVVLQRQDQLMQEVFAIRVDV
ASQPLATTLIGEISSYYTQWTGSLRFSFMFCGTANTTLKLLIAYTPPGIVKPRNRKEAML
GTHIVWDVGLQSTISMIVPWVSASHFRNTTPDTYSLAGFITCWYQTNLVVPPDTPATARM
LCFVSGCKDFCLRMARDTNLHKQSGAITQNPVEEYIDGVLNEVLVVPNIKESHSSTSNSA
PALDAAETGHTSNVQPEDMIETRYVQTSQTRDEMSVESFLGRSGCVHISNLDIDYINYNS
EDKNFTTWQINLKEMAQIRRKFEMFTYVRFDSEVTLVPCIAAQNEGVGHVVMQYMYVPPG
APLPRKRDDYTWQSGTNASVFWQYGQTYPRFSLPFLSIASAYYMFYDGYDGDSTESHYGT
AVTNDMGTLCSRIVTENHGTQVKITTRIYHKAKHVKAWCPRPPRAVEYRHTHVNNYKPDQ
GEVTTMIPTRTNIRTIVNVGPSDMYVHVGNLIYRNLHLFNSEVSDSVLVSYSSDLVIYRT
NTTGDDYIPTCDCTDATYYCKHKNRYFPIKVTSHDWYEIQESEYYPKHIQYNLLIGEGPC
EPGDCGGKLLCKHGVIGIITAGGEGHVAFIDLRHFHCAEEQGITDYIHMLGEAFGNGFVD
SVKEQVNAINPINNVSKKIIKWMLRIISAMVIIIRNSSDPQTIIATLTLIGCSGSPWRFL
KEKFCKWTQLNYIHKESDSWLKKFTEMCNAARGLEWIGNKISKFIDWMKSMLPQAQLKVK
YLSELKKLNLLEKQIDNLRCADSKVQEKIKLEIDTLHDLSCKFLPLYASEAKRIKVLFNK
CNTIIKQKKRSEPVAIMVHGPPGTGKSITTSFLARMITNESDVYSLPPDPKYFDGYDQQS
VVIMDDIMQNPDGEDMSLFCQMVSSVTFIPPMADLPDKGKPFDSRFVFCSTNQSLLAPPT
ITSLSAMNRRFFLDLDITVHDNYKDNQGKLNVPKSFKPCDVDNKIGNAKCCPFICGKAVS
FKDRNTCQTYSLSQIYNMIIEEDKRRRNVVDVMSAIFQGPISMNAPPPPAIEDLLQSVRT
PEVIKYCEENKWIIPADCKIERDLNLANNIITIIANIISIAGIIFVIYKLFCSLQGPYSG
EPKPKTRTPERRVVAQGPEEEFGRSLIKHNSCIVTTQNGKFTGLGIYDRTLIIPTHADPG
NEVQIDGITTKVEDSYDLFNKDGVKLEITVLKLKRNEKFKDIRKYIPENEDDYPDCNLAL
SANQPETTIINVGDVISYGNILLSGNQTARMLKYNYPTKSGYCGGILYKIGQVLGIHVGG
NGRDGFAAMLLRSYFTEVQGQITTTKSTSECNLPSIHTPSKTKLQPSVFHDVFPGSKEPA
VLSEHDPRLKVNFKEAIFSKYKGNNQCEMNDHIRVAISHYSAQLATLDIDPNPISLEDSV
FGIEGLEALDLNTSAGFPYVSMGVKKRDLINKQTKDVTRLKAAMDKYGVDLPMVTFLKDE
LRKQEKISAGKTRVIEASSVSDTVMFRTNFGNLFSKFHLNPGIVTGSAVGCDPETFWTKI
PVMLDGECIMAFDYTNYDGSIHPIWFQALKEVLSNLGFQPNLIDRLCKSKHIFKNTYYEV
EGGVPSGCSGTSIFNTMINNVIIRTLVLDAYKNIDLDKLKIIAYGDDVIFSYKYQLDMEA
IANEGVKYGLTITPADKSSEFKQLDYSNVTFLKRGFKQDDRYQFLIHPTFPIDEIQESIR
WTKKPSQMQEHVLSLCHLMWHNGKDVYKQFERKIRSVSAGRALYIPPYEVLLHEWYEKF
Download sequence
Identical sequences A5GZE4
A5GZE4_9ENTO

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]