SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for B9V479 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  B9V479
Domain Number 1 Region: 1697-2152
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 1.42e-142
Family RNA-dependent RNA-polymerase 0.000000000000062
Further Details:      
 
Domain Number 2 Region: 2-326
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 3.25e-133
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0000000000855
Further Details:      
 
Domain Number 3 Region: 363-562,611-824
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 6.59e-130
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.000000000396
Further Details:      
 
Domain Number 4 Region: 854-991
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 6.62e-62
Family Viral cysteine protease of trypsin fold 0.000000198
Further Details:      
 
Domain Number 5 Region: 1505-1694
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 6.04e-52
Family Viral cysteine protease of trypsin fold 0.000000073
Further Details:      
 
Domain Number 6 Region: 1412-1461
Classification Level Classification E-value
Superfamily Soluble domain of poliovirus core protein 3a 0.000000000000017
Family Soluble domain of poliovirus core protein 3a 0.002
Further Details:      
 
Domain Number 7 Region: 1111-1337
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.0000000000137
Family Extended AAA-ATPase domain 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) B9V479
Sequence length 2153
Comment (tr|B9V479|B9V479_9ENTO) Protein 3D {ECO:0000256|RuleBase:RU364118} KW=Complete proteome OX=185935 OS=Rhinovirus A81. GN= OC=Picornavirales; Picornaviridae; Enterovirus; Rhinovirus A.
Sequence
MGAQVSRQNVGTHSTQNSVSNGSSLNYFNINYFKDAASSGASRLDFSQDPSKFTDPVKDV
LEKGIPTLQSPSVEACGYSDRIIQITRGDSTITSQDVANAVVGYGVWPHYLNSRDAVAID
KPTQPDTSSNRFYTLDSKMWDSNSKGWWWKLPDALKDMGIFGENMFYHFLGRSGYTVHVQ
CNASKFHQGTLLVTMIPEHQLATVNKANVTAGYKYTHPGESGRVVGTQADDTRQPSDDNW
LNFDGTLLGNLLIFPHQFINLRSNNSATIIVPYVNAVPMDSMVRHNNWSLVIIPICQLQS
NNTSNIVPITVSISPMFAEFSGARAKTVVQGLPVYVTPGSGQFMTTDDMQSPCALPWYHP
TKEIFIPGEVKNLIEMCQVDTLIPINSTRANIGNVNMYTVTLQPQTDMATEVFAIKVDIA
SHPLATTLIGEIASYFTHWTGSLRFSFMFCGTANTTLKLLLAYTPPGISKPKNRKEAMLG
THVVWDVGLQSTVSLVVPWVSASQYRFTTPDTYSSAGYITCWYQTNFVVPPNTPNTAEML
CFVSGCKDFCLRMARDTDLHKQSGPIEQNPVERYVDEVLNEVLVVPNINESHPTTSNAAP
VLDAAETGHTSNIQPEDTIETRYVQSSQTLDEMSVESFLGRAGCIHESILDIKEDYNTQS
FTKWKINLQEMAQIRRKFEMFTYTRFDSEITLVPSIANKEGHIGHIVMQYMYVPPGAPIP
TTREDYAWQSGTNASIFWQHGQPFPRFSLPFLSVASAYYMFYDGYDGDTYQSRYGTVVTN
DMGTLCSRIVTSEQVHKVKVVTRIYHKAKHTKAWCPRPPRAVQYTHTHVTNYKLETDVHT
SVAIRPRTSLTNVGPSDMYVHVGNLIYRNLHLFNSDMHDSILVSYSSDLVIYRTNTQGDD
YIPTCNCTDATYYCKHKNRYYPIKVTPHDWYEIQESEYYPKHIQYNLLIGEGPCEPGDCG
GKLLCKHGVIGIITAGGEGHVAFIDLRHFHCAEEQGITDYIHMLGEAFGSGFVDSVKEQI
NSINPINSISSKMVKWMLRIISAMVIIIRNSSDPQTIIATLTLIGCNGSPWRFLKEKFCK
WTQLTYVHKESDSWLKKFTEMCNAARGLEWIGNKISKFIDWMKSMLPQAQLKVKYLNELK
KLNLLEKQIENLRAADTNTQEKIKCEIDTLHDLSCKFLPLYASEAKRIKVLYHKCTNIIK
QKKRSEPVAVMIHGPPGTGKSITTSFLARMITNESDIYSLPPDPKYFDGYDNQSVVIMDD
IMQNPGGEDMTLFCQMVSSVTFIPPMADLPDKGKPFDSRFVLCSTNHSLLAPPTISSLPA
MNRRFYLDLDITVHDNFKDNQGKLDVSRAFQPCDTNLKIGNAKCCPFVCGKAVMFKDRNT
CKTYSLSQVYSQILEEDKRRRQVIDVMSAIFQGPISMDKPPPPAITDLLRSVRTPEVIKY
CQDNKWIVPADCQIERDLSIANSIITIIANIVSIAGIIYIIYKLFCTLQGPYSGEPKPKT
KVPERRVVAQGPEEEFGMSIIKNNTCVVTTANGKFTGLGIYDKILIIPTHADPGSEIQVN
GIQTKILDSYDLFNKEGVKLEITVLKLDRNEKFRDIRKYIPETEDDYPECNLALVANQPE
PTIIKVGDVISYGNILLSGTQTARMLKYNYPTKSGYCGGVLYKIGLVLGIHVGGNGRDGF
SSMLLRSYFTEQQGQIKISKHVKDVGLPSIHTPSKTKLQPSVFYDIFPGSKEPAVLTDKD
PRLKVDFETALFSKYKGNVECELNDHIQVAVAHYSAQLATLDIDPQPVTLEDSVFGMDGL
EALDLNTSAGYPYVSLGIKKRDLINNKTKDISKLKVALDKYGVDLPMITFLKDELRKKDK
ISAGKTRVIEASSINDTILFRTTYGNLFSKFHLNPGVVTGCAVGCDPETFWSKIPLMLDG
DCIMAFDYTNYDGSIHPVWFKALRMVLDNLSFNSTLIDKLCNSKHIFKSTYYEVEGGVPS
GCSGTSIFNSMINNIIIRTLVLDAYKHIDLDKLKIIAYGDDVIFSYKYKLDMEAIANEGQ
KYGLTITPADKSTEFKELDYKNVTFLKRGFRQDERYSFLIHPTFPVEEIYESIRWTKKPS
QMQEHVLSLCHLMWHNGPEIYRDFETKIRSVSAGRALYIPPYDLLRHEWYEKF
Download sequence
Identical sequences B9V479
B9V479_9ENTO

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]