SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for G5DBU3 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  G5DBU3
Domain Number 1 Region: 1716-2165
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 6.92e-136
Family RNA-dependent RNA-polymerase 0.00000000000383
Further Details:      
 
Domain Number 2 Region: 2-334
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 1.45e-135
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.000000000486
Further Details:      
 
Domain Number 3 Region: 364-563,612-829
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 9.95e-128
Family Picornaviridae-like VP (VP1, VP2, VP3 and VP4) 0.0000000145
Further Details:      
 
Domain Number 4 Region: 867-1005
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 1.89e-59
Family Viral cysteine protease of trypsin fold 0.000000554
Further Details:      
 
Domain Number 5 Region: 1519-1708
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 7.42e-50
Family Viral cysteine protease of trypsin fold 0.000000136
Further Details:      
 
Domain Number 6 Region: 1426-1475
Classification Level Classification E-value
Superfamily Soluble domain of poliovirus core protein 3a 0.000000000000017
Family Soluble domain of poliovirus core protein 3a 0.0013
Further Details:      
 
Domain Number 7 Region: 1110-1141,1175-1321
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.000000000116
Family Extended AAA-ATPase domain 0.045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) G5DBU3
Sequence length 2166
Comment (tr|G5DBU3|G5DBU3_9ENTO) Protein 3D {ECO:0000256|RuleBase:RU364118} OX=147711 OS=Rhinovirus A. GN= OC=Picornavirales; Picornaviridae; Enterovirus.
Sequence
MGAQVSRQNVGTHSTQNAVSNGSSLNYFNINYFKDAASSGASRLDFSQDPSKFTDPVKDV
LMKDIPTLQSPSVEACGYSDRIIQITRGNSTITSQDIANAVVGYGVWPQYLPPDDASAID
KPTHPDISSNRFYTLESKEWTGESKGWWWKLPDALKNMGIFGENLFYHFLGRAGYTVHVQ
CNASKFHQGTLIVAAIPEHQLAYIGKGSVTVGYNHTHPGETGRVIGGFTNNNSRQPSDEN
WLNCDGTLLGNITIYPHQYINLRSNNSATLILPYVNAVPMDSMVRHNNWSIVIIPISKLQ
YETGATPYVPITLSISPMCSEFSGARNNTTQGLPVMLTPGSAQFLTTDDAQSPSALPYFH
PTKEIFIPGKVNNLSEICQVDSMIPINNTIAAKNTTGMYTVRVSQQTQPAQEIFSILVDV
ASQPIATTLIGEIASYYTHWTGSLRFSFMFCGTANTSLKLLIAYTPPGVPKPENRQKAML
STHVVWDVGLQSTVSMVVPWVSASHYRYTTPDTYSQAGYITCWYQTNFIVPPNTPREADI
ICFVSGCKDFCLRMARDTNLHTQVGVMEQNPVEKYTEAVLNEVLVVPNITPSNSQTSNAA
PALDAAETGHTSQVQPEDMVETRYVITDQTRDEMSVESFLGRSGCIAIIHTDLDHEAEQY
NAPGKNFSQWKITIKEMAQIRRKCELFTYLRFDSEITIVATVAALGQDNGHVVLQYMYVP
PGAPIPKTRDDYTWQSGTNASVFWQQGQPYPRFTIPFMSIASAYYMFYDGYEDDKGSVYG
SVVTNDMGTLCVRIVTEQQTHKVKITSRIFHKAKHISAWCPRAPRAVPYQHTKSTNLVPR
TGEITTHIRFRNTVRDLAYPTEMTNLGPSDLYVHTGNLIYRNLHLCEPENLNDSTLICYS
SDLVIYRTNTTGDDMIPTCDCTQATYYCKHKDRYYPINVKKHQWYEIQESEYYPKHIQYN
ILIGEGPCEPGDCGGKLLCKHGVIGIVTAGGDNHVAFIDLRDFQVAEEQGISDYVHTLGE
AFGAGFIDNIKEQIQAINPINKITSKIVKWTIRIVSAITIIIRNNADPHTIVATLALLGC
SGSPWRFIKEKVCNWLQLVYVHKESDGWIKKFTEMCNAARGLEWLGNKISKFVDWLKSML
PQAKLKVEFIKNLKQLPLLEKQVDGLRLASQKQQQDYIDTLTLMLDSSNKFLPLYAIENK
RIKELLKRSQMILRTSKRTEPVGVIFHGEPGTGKSITTSILARMLTTESDIYSLPPSPKY
FDGYDQQSVVIMDDIMQNPSGEDMSLFCQMVSSVPFIPPMADLPDKGKPFSSDYVLASTN
HTLLHPPTITCTTAMNRRFFLDLDIIVRDDYKLNHGKLNLQCALKPCNEGKIGNAKCCPL
ICGKALQFRDRNTGEHLSLATVYNRITQESKNRKELTNSLQAIFQGPIDVVNKPPPPAII
DLLKSVRSPDVIKYCEENKWIVPSDCKLERDLNYANLIISMLANVISIMGVIYIIYKLFC
SLQGPYSGEPKPTTRKPERRVVTQGPQEEFGRSLIKHNTCVVTTDNGKFTGLGIYDNIMI
IPTHADAGKEVEIDGIKTQVDDAYDLHNSQGIKLEITVLKLHRNEKFRDIRKYIPETEDD
YPECHLALVANQQEPTILEVGDCCSYGNILLSGNQTARMIKYNYPTKSGFCGGVLYKIGL
VLGIHVGGNGRDGFSAMLLRSYFTEQQGKITSKVSVKECNLYSIHTPSNTKLQPSVFHDI
FPGSKEPAVLSCRDPRLEVDLDESIFSKYKGNEPIEITQNMLTAAAHYTAQLSTLDINPK
PLSLEESVYGIEGLEALDLHTSAGYPYTACGIKKKDLIPKDKNLTKLKNAIEKYGLDLPM
ITFLKDELRKPEKIKTGKTRIIEASSLNDTVQFRMAFGNLFSKFHQNPGIVTGSAVGCDP
EVFWSKIPVMLDGDCLMAFDYTNYDGSLNPVWFKLLSIVLNDLGFPGELVNKLCNSKHIY
KTTYYEVEGGMPSGCAGTSIFNTIINNIIIRTLVLDAYKFINLDKLKILAYGDDVIFSYP
FDLDMKELAGEGIKYGLSITPADKSDTFRKLDYNNATFLKRGFKQDEKYGFLIHPIYPET
EVWESIRWTKNPRNMQEHVLSLCHLMWHNGKDKYKHFVDKIRSVSAGRALYIPPYEVLLH
EWYEKF
Download sequence
Identical sequences G5DBU3

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]