SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFALP00000006738 from Ficedula albicollis 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSFALP00000006738
Domain Number 1 Region: 38-259
Classification Level Classification E-value
Superfamily L domain-like 1.05e-31
Family Ngr ectodomain-like 0.013
Further Details:      
 
Domain Number 2 Region: 254-348
Classification Level Classification E-value
Superfamily Immunoglobulin 6.95e-16
Family I set domains 0.02
Further Details:      
 
Domain Number 3 Region: 451-518
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000798
Family Fibronectin type III 0.0037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000006738   Gene: ENSFALG00000006458   Transcript: ENSFALT00000006767
Sequence length 646
Comment pep:known_by_projection scaffold:FicAlb_1.4:JH603262.1:396596:410537:1 gene:ENSFALG00000006458 transcript:ENSFALT00000006767 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MYLFICFYLLMSFFEEVYGFCPSQCTCVYHGRSDGTGTRSVLCNDPDMYEIPVNVPVDTV
KLRIEKTVIRRIPTEAFYYLVDLKYLWVTYNCVANIDISSFYNLKLLHELRLDGNLLSTF
PWESLAEMPNLRTLDLHNNKLTSIPADAGRFLRNLTYLDLSSNKLTTLPSDLMDIWPPFS
GAIVSRNTDILVTQRVILGFQDNPWFCDCRISKLIEFSKIVDTSVVLLDPLVSCSGPESL
AGILFQRAELEQCLKPSVMTSATKITSPLGSNVLLRCDATGYPTPQLTWNRSDNIPVNYT
VIQETPGEGVRWSIISLTGISYKDAGEYRCKAKNLAGMSEAAVTVTVVGVVTTTVSPQKY
GRKPEAEMQNTTQEESKLEPERTTTPLPTTPTTTALVSTDRSTSMTFTDKKQSRLMLDGK
KGSKAVTNGNKKQIGDLSNKAGTAEQNVTVKNLRVISETDERVTLTWKTVNATGNSAVTV
LYSKYGEKDMLPLSTDSNKNKVTIDGLQPSTQYMACVSPKGVPPTKEQCVVFSTDGLNNE
SSSEFSILVVASSAACVVVLPLIFFLLYKVLKLHLKPKSAKEAELAKETYVQFETLSLKP
RTLSAGDQLWARRYTDESERLLLCSRSSMDSQMTFKSEGSRSEYLC
Download sequence
Identical sequences U3JVD4
ENSFALP00000006738

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]