SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSFALP00000011723 from Ficedula albicollis 76_1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSFALP00000011723
Domain Number 1 Region: 19-270
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.03e-33
Family WD40-repeat 0.0015
Further Details:      
 
Weak hits

Sequence:  ENSFALP00000011723
Domain Number - Region: 459-490,530-571
Classification Level Classification E-value
Superfamily ARM repeat 0.0121
Family MIF4G domain-like 0.069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000011723   Gene: ENSFALG00000011213   Transcript: ENSFALT00000011771
Sequence length 585
Comment pep:known_by_projection scaffold:FicAlb_1.4:JH603183.1:1804004:1824769:1 gene:ENSFALG00000011213 transcript:ENSFALT00000011771 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
DGPQRKKRKSEVGEVDKQLDILAIGTAVGSILLYSTVKGELQSKLDGGHDSRVNCVRWHQ
DSCCLYSCSDDKHIVEWNTQTCKVKCKWKGDNSSVTCLCISPDGKMLLSAGRTIKLWDLE
TKEVYRHFTGHATSVSSLMFTTVKPMNESKPFDGITGLYFLSGAIHDRLLSVWYIRSDRK
EKNAVMSFSVTEEPTFVDLTVSEVKEEPVKLAVVCRDGQLHLFEHILNGYCKKPLTSNCT
VQIATPGNDGDSTPKPVPILAAAFCKDKQSLLLVYGNTLQPILEKVSLNTSESHICLVRD
MQKVLSLKTDAAVTKVKTPVVNSDTKVLVPGIPGHSTAVKTPASGKEKKKNKRKPGETEE
SIEERLGALDIDVSKVKTPGGLPQTDSFAVLLVQGLESNDAEILNKVLNTRKENIVKNTV
ARMPIHAVIPLLHELTKRLQGNPYSASLMVRWLKSVFTLHASYLSTLPDLIPQLGMLYQL
MESRVKTLQKLSRLHGRLFILVTQLAASQAVQDVPEVNQTAKLVYEDDSSEEEGSDDEMI
ADKDSDENWDEDDEKEEQSDEQDMTVEKEINGDSDLEPENESEEE
Download sequence
Identical sequences U3K9L9
ENSFALP00000011723

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]