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Domain assignment for U3JRQ1 from Uniprot 2018_03 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  U3JRQ1
Domain Number 1 Region: 54-255
Classification Level Classification E-value
Superfamily WD40 repeat-like 0.00000000000000412
Family WD40-repeat 0.023
Further Details:      
 
Domain Number 2 Region: 780-850
Classification Level Classification E-value
Superfamily RING/U-box 0.0000106
Family RING finger domain, C3HC4 0.054
Further Details:      
 
Weak hits

Sequence:  U3JRQ1
Domain Number - Region: 411-662
Classification Level Classification E-value
Superfamily ARM repeat 0.000242
Family Clathrin heavy chain proximal leg segment 0.031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) U3JRQ1
Sequence length 863
Comment (tr|U3JRQ1|U3JRQ1_FICAL) VPS41, HOPS complex subunit {ECO:0000313|Ensembl:ENSFALP00000005455} KW=Complete proteome; Reference proteome OX=59894 OS=Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis). GN=VPS41 OC=Ficedula.
Sequence
MYILSYLPLCFLCPFQETRSNEESTDESEEDESEEEPKLKYERLSNGVTEILQKDAASCM
TVHEKFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVF
GLYSAEEFHETFDCPIKIVAVHPHFVRSHFKQFVTGGKKLLLYERGWMNRWKPSVLHEGE
GNIRNVKWRGHLIAWANNMGVKILDMISKQRITNVPRDDISLRPDMYPCSLCWKDNLTLI
IGWGNSVKICSVKERHASEMRDLPNRYVEIVFQFDTEFYISGLAPLCDQLVILSYVKEIS
EKTEVECCARPRLDIVQPLPESCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIISP
RDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISQKTIKKHKILDIGLAYINHLVEKGEY
DLAARKCQKILGKNTELWEFEVYKFKEIGQLKAISRYLPRRDPVLKPLIYEMVLHEFLES
DYEGFATLIKEWPGDLYNNTIIVQAVVDHLKKDPQNRTLLRTLAELYTYDQRYGRALEIY
LTLRHKDVFQLIHKHNLFSSIRDKIVLLMDFDSEKAVDMLLDNEDKISIDRVVEELENRP
ELQHVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRN
FVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFIT
GLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSL
LKKMHRTQMKGVLVDEENICESCLSPILPSDASKSFSVVVFHCRHMFHRECLPVSNTVSS
VQFCNICSAKHRGPGSAVLEMKK
Download sequence
Identical sequences U3JRQ1
ENSFALP00000005455

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