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Domain assignment for XP_005043836.1.66865 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005043836.1.66865
Domain Number 1 Region: 52-280,390-410,451-531
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.83e-42
Family WD40-repeat 0.0093
Further Details:      
 
Domain Number 2 Region: 392-410,451-537,624-660,780-830,909-1003
Classification Level Classification E-value
Superfamily WD40 repeat-like 0.000000000125
Family WD40-repeat 0.017
Further Details:      
 
Domain Number 3 Region: 1085-1141
Classification Level Classification E-value
Superfamily SNARE fusion complex 0.00000000246
Family SNARE fusion complex 0.0000673
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_005043836.1.66865
Sequence length 1149
Comment PREDICTED: syntaxin-binding protein 5 isoform X2 [Ficedula albicollis]; AA=GCF_000247815.1; RF=representative genome; TAX=59894; STAX=59894; NAME=Ficedula albicollis; AL=Chromosome; RT=Major
Sequence
MRKFNIRKVLDGLSAVSAVASASSAAQQQQAGNRETEIQETLQSEHFQLCKTVRHGFPYQ
PSALAFDPVQKILAIGTQTGALRLFGRPGVECYCQHDSGAAVIQLQFLINEGALVSALAD
DTLHLWNLRQKRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNIHIVNVESFTLSGY
VIMWNKAIELSSKSHPGPVVHISDNPMDEGKLLIGFESGTVVLWDLKSKKADYRYTHDEA
IHSVAWHHEGKQFICSHSDGTLTIWNVKSPTKPFQTITPHGKQLKDGKKPEPCKPILKVE
YKTTRAGEPFIILSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYSIVDFLTLCETPYPNDF
QEPYAVVVLLEKDLVLIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSV
GARQKRQGYSKKEWPISGGNWGVITQSYSEIIITGHADGSIKFWDASAITLQVLYKLKTA
KVFEKSRNKDDRPSTDIVDEDPYAIQIISWCPESRMLCIAGVSAHVIIYRFSKQEVTTEV
IPMLEVRLLYEINDVETPDGEQVPPVPTPGTGSNPQSIVPQSHPSTSSSSSDGLRDNVPC
LKVKNAPLKQSPGYQIELVIQLVWVSGEPPQQITSLAINSAYGLVVFGNCNGIAMVDYLQ
KTVLLNLGTIELYGSNDPYRREPRSPRKTRQPSGGLCDINEGTVVPEDRCKSPTSGSGSP
NNSDDEQKMNNFIEKVKTKSRKFSKMVTNDIAKMSRKLSLPTELKPDLDVKDNSFSRSRS
SSVTSIDKESREAISALHFCETFTRKADTSPSPCLWVGTTLGTVLVIALNLPPGGEQRLL
QPVIVSPSGTILRLKGAILRMAFLDTTGSLVPPAHEPWREHYEDKDEKEKAKKRRPVSVS
PSSSQEISENQYAVICSEKQAKVISLPSQNCIYKQNITETSFVLRGDIVSLNNSICLACF
CANGHIMTFSLPSLRPLLDVYYLPLTNMRIARTFCFTNNGQALYLVSPTEIQRLTYSQET
CENLQEMLGELFTLVETPEAPNRGFFKGLFGGGAQSLDREELFGESASGKASRSLAQHIP
GPGGIEGVKGAASGVVGELARARLALDERGQKLGELEEKTAAMLYSADSFSKHAHEMMLK
YKDKKWYQF
Download sequence
Identical sequences U3KF68
XP_005043836.1.66865 ENSFALP00000013672

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