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Plant ANatomical entity (PAN): pollen 
(show info)
Biomedical Ontology
Like Gene Ontology (GO), biomedical ontology such as phenotype ontology classifies and organizes gene-mutant/null phenotypic information from the very general at the top to more specific terms in the directed acyclic graph (DAG) by viewing an individual term as a node and its relations to parental terms (allowing for multiple parents) as directed edges. To navigate this hierarchy, we display all parental phenotypic terms to the current phenotypic term of interest ordered by their shortest distances to the current term. Also, only direct children phenotypic terms of the current phenotypic term are listed. Biomedical ontologies we have incorporated are as follows:
- Disease Ontology (DO) Ontology DO semantically integrates disease and medical vocabularies through extensive cross mapping of DO terms to MeSH, ICD, NCI’s thesaurus, SNOMED and OMIM.
- Human Phenotype (HP) Ontology HP captures phenotypic abnormalities that are described in OMIM, along with the corresponding disease-causing genes. It includes three complementary biological concepts: Mode_of_Inheritance (MI), ONset_and_clinical_course (ON), and Phenotypic_Abnormality (PA).
- Mouse Phenotype (MP) Ontology MP describes phenotypes of the mouse after a specific gene is genetically disrupted. Using it, Mouse Genome Informatics (MGI) provides high-coverate gene-level phenotypes for the mouse.
- Worm Phenotype (WP) Ontology WP classifies and organizes phenotype descriptions for C. elegans and other nematodes. Using it, WormBase provides primary resource for phenotype annotations for C. elegans.
- Yeast Phenotype (YP) Ontology Based on YP which is the major contributor to the ‘Ascomycete phenotype ontology’, Saccharomyces Genome Database (SGD) provides single mutant phenotypes for every gene in the yeast genome.
- Fly Phenotype (FP) Ontology FP refers to FlyBase controlled vocabulary. Specifically, a structured controlled vocabulary is used for the annotation of alleles (for their mutagen etc) in FlyBase.
- Fly Anatomy (FA) Ontology FA is a structured controlled vocabulary of the anatomy of Drosophila melanogaster, used for the description of phenotypes and where a gene is expressed.
- Zebrafish Anatomy (ZA) Ontology ZA displays anatomical terms of the zebrafish using standard anatomical nomenclature, together with affected genes.
- Xenopus Anatomy (XA) Ontology XA represents the lineage of tissues and the timing of development for frogs (Xenopus laevis and Xenopus tropicalis). It is used to annotate Xenopus gene expression patterns and mutant and morphant phenotypes.
- Arabidopsis Plant Ontology (AP) Ontology As a major contributor to Plant Ontology which describes plant anatomical and morphological structures (AN) and growth and developmental stages (DE), the Arabidopsis Information Resource (TAIR) provides arabidopsis plant ontology annotations for the model higher plant Arabidopsis thaliana.
- Enzyme Commission (EC) Ontology Each enzyme is allocated a four-digit EC number, the first three digits of which define the reaction catalysed and the fourth of which is a unique identifier (serial number). Each enzyme is also assigned a systematic name that uniquely defines the reaction catalysed.
- UniProtKB KeyWords (KW) Ontology Keywords in UniProtKB are controlled vocabulary, providing a summary of the entry content and are used to index UniProtKB/Swiss-Prot entries based on 10 categories (the category "Technical term" being excluded here). Each keyword is attributed manually to UniProtKB/Swiss-Prot entries and automatically to UniProtKB/TrEMBL entries (according to specific annotation rules).
- CTD Diseases (CD) Ontology CD is MEDIC disease vocabulary that is modified by CTD from the "Diseases" [C] branch of Medical Subject Headings (MeSH), combined with genetic disorders from the Online Mendelian Inheritance in OMIM database.
- CTD Chemicals (CC) Ontology CC is chemical vocabulary that is adapted by CTD from the "Chemicals and Drugs" category and Supplementary Concept Records of Medical Subject Headings (MeSH, a hierarchical vocabulary used to index articles for MEDLINE/PubMed).
Jump to [ Top · Hierarchy · Annotations ]
Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)
Jump to [ Top · Hierarchy ]
Superfamily( show details)
Highlighted in gray are those with FDR_all>0.001
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| SH3-domain | 0 | DIRECT |
| Caspase-like | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| VHP, Villin headpiece domain | 0 | DIRECT |
| Lipocalins | 0 | DIRECT |
| Granulin repeat | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| TATA-box binding protein-like | 0 | DIRECT |
| Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| lambda repressor-like DNA-binding domains | 0 | DIRECT |
| UROD/MetE-like | 0 | DIRECT |
| Sec7 domain | 0 | DIRECT |
| Staphylococcal nuclease | 0 | DIRECT |
| YrdC/RibB | 0 | DIRECT |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| V-type ATPase subunit E-like | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Electron transport accessory proteins | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| Chelatase | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| NAP-like | 0 | DIRECT |
| Profilin (actin-binding protein) | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| Pentapeptide repeat-like | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Metallo-dependent hydrolases | 0 | DIRECT |
| HSP90 C-terminal domain | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| beta-N-acetylhexosaminidase-like domain | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
| PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | DIRECT |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| Zinc-binding domain of translation initiation factor 2 beta | 0 | DIRECT |
| GlnB-like | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| S13-like H2TH domain | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| Ribosomal protein L16p/L10e | 0 | DIRECT |
| AlbA-like | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| MOSC N-terminal domain-like | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| Inorganic pyrophosphatase | 0 | DIRECT |
| alpha-helical ferredoxin | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| Lipoxigenase | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Tim10-like | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| Pentein | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| SufE/NifU | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| Heme-dependent catalase-like | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Dimeric alpha+beta barrel | 0 | DIRECT |
| HAD-like | 0.0000001574 | DIRECT |
| Single hybrid motif | 0.0001023 | DIRECT |
| E set domains | 0.000106 | DIRECT |
| NAD(P)-binding Rossmann-fold domains | 0.0001265 | DIRECT |
| PP2C-like | 0.000169 | DIRECT |
| Thioredoxin-like | 0.0001963 | DIRECT |
| ARM repeat | 0.0002784 | DIRECT |
| UBC-like | 0.0003354 | DIRECT |
| PH domain-like | 0.0003383 | DIRECT |
| Mitochondrial carrier | 0.0004021 | DIRECT |
| Calcium ATPase, transduction domain A | 0.0004417 | DIRECT |
| Calcium ATPase, transmembrane domain M | 0.0004417 | DIRECT |
| ALDH-like | 0.000484 | DIRECT |
| (Phosphotyrosine protein) phosphatases II | 0.0005422 | DIRECT |
| GroEL apical domain-like | 0.0005692 | DIRECT |
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| SH3-domain | 0 | Direct |
| Caspase-like | 0 | Direct |
| RraA-like | 0 | Direct |
| VHP, Villin headpiece domain | 0 | Direct |
| Lipocalins | 0 | Direct |
| Granulin repeat | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| TATA-box binding protein-like | 0 | Direct |
| Composite domain of metallo-dependent hydrolases | 0 | Direct |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| lambda repressor-like DNA-binding domains | 0 | Direct |
| UROD/MetE-like | 0 | Direct |
| Sec7 domain | 0 | Direct |
| Staphylococcal nuclease | 0 | Direct |
| YrdC/RibB | 0 | Direct |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| V-type ATPase subunit E-like | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Electron transport accessory proteins | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| Chelatase | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| NAP-like | 0 | Direct |
| Profilin (actin-binding protein) | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| Pentapeptide repeat-like | 0 | Direct |
| BolA-like | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| Expressed protein At2g23090/F21P24.15 | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Metallo-dependent hydrolases | 0 | Direct |
| HSP90 C-terminal domain | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| beta-N-acetylhexosaminidase-like domain | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
| PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | Direct |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
| FF domain | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| Zinc-binding domain of translation initiation factor 2 beta | 0 | Direct |
| GlnB-like | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| S13-like H2TH domain | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| Ribosomal protein L16p/L10e | 0 | Direct |
| AlbA-like | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| MOSC N-terminal domain-like | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| eIF1-like | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| Inorganic pyrophosphatase | 0 | Direct |
| alpha-helical ferredoxin | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| Lipoxigenase | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| Tim10-like | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
| RibA-like | 0 | Direct |
| Pentein | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| SufE/NifU | 0 | Direct |
| HesB-like domain | 0 | Direct |
| Heme-dependent catalase-like | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Dimeric alpha+beta barrel | 0 | Direct |
| HAD-like | 0.0000001574 | Direct |
| Single hybrid motif | 0.0001023 | Direct |
| E set domains | 0.000106 | Direct |
| NAD(P)-binding Rossmann-fold domains | 0.0001265 | Direct |
| PP2C-like | 0.000169 | Direct |
| Thioredoxin-like | 0.0001963 | Direct |
| ARM repeat | 0.0002784 | Direct |
| UBC-like | 0.0003354 | Direct |
| PH domain-like | 0.0003383 | Direct |
| Mitochondrial carrier | 0.0004021 | Direct |
| Calcium ATPase, transduction domain A | 0.0004417 | Direct |
| Calcium ATPase, transmembrane domain M | 0.0004417 | Direct |
| ALDH-like | 0.000484 | Direct |
| (Phosphotyrosine protein) phosphatases II | 0.0005422 | Direct |
| GroEL apical domain-like | 0.0005692 | Direct |
LINKTO: Domain2BO Download and Domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Family( show details)
Highlighted in gray are those with FDR_all>0.001
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| Glycosyl hydrolases family 32 C-terminal domain | 0 | DIRECT |
| Pseudouridine synthase II TruB | 0 | DIRECT |
| Heme-dependent catalases | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| Plant lipoxigenases | 0 | DIRECT |
| Lipoxigenase N-terminal domain | 0 | DIRECT |
| Aminoacid dehydrogenases | 0 | DIRECT |
| Zinc-binding domain of translation initiation factor 2 beta | 0 | DIRECT |
| NADPH-cytochrome p450 reductase-like | 0 | DIRECT |
| LIM domain | 0 | DIRECT |
| gamma-carbonic anhydrase-like | 0 | DIRECT |
| Phosphoenolpyruvate carboxylase | 0 | DIRECT |
| Tim10/DDP | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| Trunk domain of Sec23/24 | 0 | DIRECT |
| RWD domain | 0 | DIRECT |
| CoA-binding domain | 0 | DIRECT |
| PAPS reductase-like | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), intermediate domain | 0 | DIRECT |
| UDP-glucose pyrophosphorylase | 0 | DIRECT |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Reductases | 0 | DIRECT |
| V-type ATPase subunit E | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), apical domain | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| Rps19E-like | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| Tetramerization domain of potassium channels | 0 | DIRECT |
| Methionine aminopeptidase, insert domain | 0 | DIRECT |
| GABARAP-like | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| Branched-chain alpha-keto acid dehydrogenase Pyr module | 0 | DIRECT |
| L23p | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| Ferritin | 0 | DIRECT |
| Myf domain | 0 | DIRECT |
| Plant stress-induced protein | 0 | DIRECT |
| Ribosomal protein S13 | 0 | DIRECT |
| Heat shock protein 90, HSP90, N-terminal domain | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| Mo25 protein | 0 | DIRECT |
| Cytidylyltransferase | 0 | DIRECT |
| HEAT repeat | 0 | DIRECT |
| Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | DIRECT |
| Nuclear movement domain | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| Steroid-binding domain | 0 | DIRECT |
| HSP90 C-terminal domain | 0 | DIRECT |
| B56-like | 0 | DIRECT |
| NAP-like | 0 | DIRECT |
| Ribosomal protein S27e | 0 | DIRECT |
| Ribosomal protein L10e | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| Anticodon-binding domain | 0 | DIRECT |
| BAR domain | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| Cystatins | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| Ribosomal protein S15 | 0 | DIRECT |
| LON domain-like | 0 | DIRECT |
| Rubredoxin | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| beta-Galactosidase/glucuronidase, N-terminal domain | 0 | DIRECT |
| Ran-binding domain | 0 | DIRECT |
| Class-II DAHP synthetase | 0 | DIRECT |
| beta-N-acetylhexosaminidase catalytic domain | 0 | DIRECT |
| Eps15 homology domain (EH domain) | 0 | DIRECT |
| Ring hydroxylating alpha subunit ISP domain | 0 | DIRECT |
| Receiver domain of the ethylene receptor | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| Clp protease, ClpP subunit | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| Cobalamin-independent methionine synthase | 0 | DIRECT |
| Choline kinase | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| RNB domain-like | 0 | DIRECT |
| 5' nucleotidase-like | 0 | DIRECT |
| Gelsolin-like | 0 | DIRECT |
| MYND zinc finger | 0 | DIRECT |
| Poly(A) polymerase, PAP, middle domain | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| Enolase | 0 | DIRECT |
| NadC N-terminal domain-like | 0 | DIRECT |
| Adenosine-5'phosphosulfate kinase (APS kinase) | 0 | DIRECT |
| Sec7 domain | 0 | DIRECT |
| AMPK-beta glycogen binding domain-like | 0 | DIRECT |
| Inorganic pyrophosphatase | 0 | DIRECT |
| Glyoxalase I (lactoylglutathione lyase) | 0 | DIRECT |
| Folylpolyglutamate synthetase | 0 | DIRECT |
| Sec63 C-terminal domain-like | 0 | DIRECT |
| RelA/SpoT domain | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| Cdc48 N-terminal domain-like | 0 | DIRECT |
| VHP, Villin headpiece domain | 0 | DIRECT |
| Granulin repeat | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), ATPase domain | 0 | DIRECT |
| Gastric lipase | 0 | DIRECT |
| Staphylococcal nuclease | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| Profilin (actin-binding protein) | 0 | DIRECT |
| Cytochrome p450 reductase N-terminal domain-like | 0 | DIRECT |
| Hsp90 middle domain | 0 | DIRECT |
| IPP isomerase-like | 0 | DIRECT |
| Thiolase-related | 0 | DIRECT |
| Shikimate kinase (AroK) | 0 | DIRECT |
| D-ribulose-5-phosphate 3-epimerase | 0 | DIRECT |
| Poly(A) polymerase, PAP, N-terminal domain | 0 | DIRECT |
| NadC C-terminal domain-like | 0 | DIRECT |
| 2Fe-2S ferredoxin-related | 0 | DIRECT |
| Sedlin (SEDL) | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| CAT-like | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | DIRECT |
| Calnexin/calreticulin | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | DIRECT |
| NifU/IscU domain | 0 | DIRECT |
| GDI-like N domain | 0 | DIRECT |
| Hypothetical protein At2g34160 | 0 | DIRECT |
| BphP N-terminal domain-like | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| PUA domain | 0 | DIRECT |
| PCI domain (PINT motif) | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| RhoGDI-like | 0 | DIRECT |
| Poly(A) polymerase, PAP, C-terminal domain | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| EDF1-like | 0 | DIRECT |
| SufE-like | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | DIRECT |
| Pentapeptide repeats | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| beta-sandwich domain of Sec23/24 | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| NADPH-cytochrome p450 reductase FAD-binding domain-like | 0 | DIRECT |
| eIF5a N-terminal domain-like | 0 | DIRECT |
| Sec63 N-terminal domain | 0 | DIRECT |
| YicI N-terminal domain-like | 0 | DIRECT |
| G proteins | 0.00001536 | DIRECT |
| PP2C-like | 0.00005196 | DIRECT |
| Biotinyl/lipoyl-carrier proteins and domains | 0.0001147 | DIRECT |
| Glycosyl hydrolases family 35 catalytic domain | 0.000517 | DIRECT |
| UBC-related | 0.0006077 | DIRECT |
| Mitochondrial carrier | 0.0008187 | DIRECT |
| ALDH-like | 0.000853 | DIRECT |
| Calcium ATPase, transduction domain A | 0.0008605 | DIRECT |
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| FF domain | 0 | Direct |
| Glycosyl hydrolases family 32 C-terminal domain | 0 | Direct |
| Pseudouridine synthase II TruB | 0 | Direct |
| Heme-dependent catalases | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| Plant lipoxigenases | 0 | Direct |
| Lipoxigenase N-terminal domain | 0 | Direct |
| Aminoacid dehydrogenases | 0 | Direct |
| Zinc-binding domain of translation initiation factor 2 beta | 0 | Direct |
| NADPH-cytochrome p450 reductase-like | 0 | Direct |
| LIM domain | 0 | Direct |
| gamma-carbonic anhydrase-like | 0 | Direct |
| Phosphoenolpyruvate carboxylase | 0 | Direct |
| Tim10/DDP | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| Trunk domain of Sec23/24 | 0 | Direct |
| RWD domain | 0 | Direct |
| CoA-binding domain | 0 | Direct |
| PAPS reductase-like | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Group II chaperonin (CCT, TRIC), intermediate domain | 0 | Direct |
| UDP-glucose pyrophosphorylase | 0 | Direct |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Reductases | 0 | Direct |
| V-type ATPase subunit E | 0 | Direct |
| Group II chaperonin (CCT, TRIC), apical domain | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| Rps19E-like | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| Tetramerization domain of potassium channels | 0 | Direct |
| Methionine aminopeptidase, insert domain | 0 | Direct |
| GABARAP-like | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| HesB-like domain | 0 | Direct |
| Branched-chain alpha-keto acid dehydrogenase Pyr module | 0 | Direct |
| L23p | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| Ferritin | 0 | Direct |
| Myf domain | 0 | Direct |
| Plant stress-induced protein | 0 | Direct |
| Ribosomal protein S13 | 0 | Direct |
| Heat shock protein 90, HSP90, N-terminal domain | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| SH3-domain | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| Mo25 protein | 0 | Direct |
| Cytidylyltransferase | 0 | Direct |
| HEAT repeat | 0 | Direct |
| Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | Direct |
| Nuclear movement domain | 0 | Direct |
| RraA-like | 0 | Direct |
| Steroid-binding domain | 0 | Direct |
| HSP90 C-terminal domain | 0 | Direct |
| B56-like | 0 | Direct |
| NAP-like | 0 | Direct |
| Ribosomal protein S27e | 0 | Direct |
| Ribosomal protein L10e | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| Anticodon-binding domain | 0 | Direct |
| BAR domain | 0 | Direct |
| RibA-like | 0 | Direct |
| Cystatins | 0 | Direct |
| BolA-like | 0 | Direct |
| Ribosomal protein S15 | 0 | Direct |
| LON domain-like | 0 | Direct |
| Rubredoxin | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| beta-Galactosidase/glucuronidase, N-terminal domain | 0 | Direct |
| Ran-binding domain | 0 | Direct |
| Class-II DAHP synthetase | 0 | Direct |
| beta-N-acetylhexosaminidase catalytic domain | 0 | Direct |
| Eps15 homology domain (EH domain) | 0 | Direct |
| Ring hydroxylating alpha subunit ISP domain | 0 | Direct |
| Receiver domain of the ethylene receptor | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| Clp protease, ClpP subunit | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| Cobalamin-independent methionine synthase | 0 | Direct |
| Choline kinase | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| RNB domain-like | 0 | Direct |
| 5' nucleotidase-like | 0 | Direct |
| Gelsolin-like | 0 | Direct |
| MYND zinc finger | 0 | Direct |
| Poly(A) polymerase, PAP, middle domain | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| Enolase | 0 | Direct |
| NadC N-terminal domain-like | 0 | Direct |
| Adenosine-5'phosphosulfate kinase (APS kinase) | 0 | Direct |
| Sec7 domain | 0 | Direct |
| AMPK-beta glycogen binding domain-like | 0 | Direct |
| Inorganic pyrophosphatase | 0 | Direct |
| Glyoxalase I (lactoylglutathione lyase) | 0 | Direct |
| Folylpolyglutamate synthetase | 0 | Direct |
| Sec63 C-terminal domain-like | 0 | Direct |
| RelA/SpoT domain | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| Cdc48 N-terminal domain-like | 0 | Direct |
| VHP, Villin headpiece domain | 0 | Direct |
| Granulin repeat | 0 | Direct |
| Group II chaperonin (CCT, TRIC), ATPase domain | 0 | Direct |
| Gastric lipase | 0 | Direct |
| Staphylococcal nuclease | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| Profilin (actin-binding protein) | 0 | Direct |
| Cytochrome p450 reductase N-terminal domain-like | 0 | Direct |
| Hsp90 middle domain | 0 | Direct |
| IPP isomerase-like | 0 | Direct |
| Thiolase-related | 0 | Direct |
| Shikimate kinase (AroK) | 0 | Direct |
| D-ribulose-5-phosphate 3-epimerase | 0 | Direct |
| Poly(A) polymerase, PAP, N-terminal domain | 0 | Direct |
| NadC C-terminal domain-like | 0 | Direct |
| 2Fe-2S ferredoxin-related | 0 | Direct |
| Sedlin (SEDL) | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| CAT-like | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | Direct |
| Calnexin/calreticulin | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | Direct |
| NifU/IscU domain | 0 | Direct |
| GDI-like N domain | 0 | Direct |
| Hypothetical protein At2g34160 | 0 | Direct |
| BphP N-terminal domain-like | 0 | Direct |
| eIF1-like | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| PUA domain | 0 | Direct |
| PCI domain (PINT motif) | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| RhoGDI-like | 0 | Direct |
| Poly(A) polymerase, PAP, C-terminal domain | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| EDF1-like | 0 | Direct |
| SufE-like | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | Direct |
| Pentapeptide repeats | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| beta-sandwich domain of Sec23/24 | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| NADPH-cytochrome p450 reductase FAD-binding domain-like | 0 | Direct |
| eIF5a N-terminal domain-like | 0 | Direct |
| Sec63 N-terminal domain | 0 | Direct |
| YicI N-terminal domain-like | 0 | Direct |
| G proteins | 0.00001536 | Direct |
| PP2C-like | 0.00005196 | Direct |
| Biotinyl/lipoyl-carrier proteins and domains | 0.0001147 | Direct |
| Glycosyl hydrolases family 35 catalytic domain | 0.000517 | Direct |
| UBC-related | 0.0006077 | Direct |
| Mitochondrial carrier | 0.0008187 | Direct |
| ALDH-like | 0.000853 | Direct |
| Calcium ATPase, transduction domain A | 0.0008605 | Direct |
LINKTO: Domain2BO Download and Domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Single)( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| YrdC/RibB | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| Caspase-like | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| Ribosomal protein L16p/L10e | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| Pentapeptide repeat-like | 0 | DIRECT |
| Metallo-dependent hydrolases | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| Chelatase | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| Granulin repeat | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| Lipoxigenase | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| HSP90 C-terminal domain | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| beta-N-acetylhexosaminidase-like domain | 0 | DIRECT |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| S13-like H2TH domain | 0 | DIRECT |
| Profilin (actin-binding protein) | 0 | DIRECT |
| PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| Sec7 domain | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| Dimeric alpha+beta barrel | 0 | DIRECT |
| Pentein | 0 | DIRECT |
| Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
| alpha-helical ferredoxin | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| Zinc-binding domain of translation initiation factor 2 beta | 0 | DIRECT |
| VHP, Villin headpiece domain | 0 | DIRECT |
| Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| SufE/NifU | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| Electron transport accessory proteins | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| AlbA-like | 0 | DIRECT |
| Inorganic pyrophosphatase | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| Lipocalins | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| UROD/MetE-like | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| MOSC N-terminal domain-like | 0 | DIRECT |
| Staphylococcal nuclease | 0 | DIRECT |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
| Heme-dependent catalase-like | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| lambda repressor-like DNA-binding domains | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| Tim10-like | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| TATA-box binding protein-like | 0 | DIRECT |
| V-type ATPase subunit E-like | 0 | DIRECT |
| NAP-like | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| GlnB-like | 0 | DIRECT |
| HAD-like | 0.0000001221 | DIRECT |
| Single hybrid motif | 0.00008015 | DIRECT |
| E set domains | 0.00008306 | DIRECT |
| NAD(P)-binding Rossmann-fold domains | 0.00009922 | DIRECT |
| PP2C-like | 0.0001327 | DIRECT |
| Thioredoxin-like | 0.0001542 | DIRECT |
| ARM repeat | 0.000219 | DIRECT |
| UBC-like | 0.000264 | DIRECT |
| PH domain-like | 0.0002663 | DIRECT |
| Mitochondrial carrier | 0.0003171 | DIRECT |
| Calcium ATPase, transduction domain A | 0.0003484 | DIRECT |
| Calcium ATPase, transmembrane domain M | 0.0003484 | DIRECT |
| ALDH-like | 0.0003819 | DIRECT |
| (Phosphotyrosine protein) phosphatases II | 0.0004282 | DIRECT |
| GroEL apical domain-like | 0.0004497 | DIRECT |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.0009242 | DIRECT |
| EF-hand | 0.0009927 | DIRECT |
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| YrdC/RibB | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| Caspase-like | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| Ribosomal protein L16p/L10e | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| HesB-like domain | 0 | Direct |
| Pentapeptide repeat-like | 0 | Direct |
| Metallo-dependent hydrolases | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| Chelatase | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| Granulin repeat | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| RibA-like | 0 | Direct |
| Lipoxigenase | 0 | Direct |
| SH3-domain | 0 | Direct |
| HSP90 C-terminal domain | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| beta-N-acetylhexosaminidase-like domain | 0 | Direct |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| S13-like H2TH domain | 0 | Direct |
| Profilin (actin-binding protein) | 0 | Direct |
| PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| Sec7 domain | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| BolA-like | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| Dimeric alpha+beta barrel | 0 | Direct |
| Pentein | 0 | Direct |
| Composite domain of metallo-dependent hydrolases | 0 | Direct |
| alpha-helical ferredoxin | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| Zinc-binding domain of translation initiation factor 2 beta | 0 | Direct |
| VHP, Villin headpiece domain | 0 | Direct |
| Expressed protein At2g23090/F21P24.15 | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| SufE/NifU | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| Electron transport accessory proteins | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| AlbA-like | 0 | Direct |
| Inorganic pyrophosphatase | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| Lipocalins | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| eIF1-like | 0 | Direct |
| UROD/MetE-like | 0 | Direct |
| RraA-like | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| MOSC N-terminal domain-like | 0 | Direct |
| Staphylococcal nuclease | 0 | Direct |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
| Heme-dependent catalase-like | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| lambda repressor-like DNA-binding domains | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| FF domain | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| Tim10-like | 0 | Direct |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| TATA-box binding protein-like | 0 | Direct |
| V-type ATPase subunit E-like | 0 | Direct |
| NAP-like | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| GlnB-like | 0 | Direct |
| HAD-like | 0.0000001221 | Direct |
| Single hybrid motif | 0.00008015 | Direct |
| E set domains | 0.00008306 | Direct |
| NAD(P)-binding Rossmann-fold domains | 0.00009922 | Direct |
| PP2C-like | 0.0001327 | Direct |
| Thioredoxin-like | 0.0001542 | Direct |
| ARM repeat | 0.000219 | Direct |
| UBC-like | 0.000264 | Direct |
| PH domain-like | 0.0002663 | Direct |
| Mitochondrial carrier | 0.0003171 | Direct |
| Calcium ATPase, transduction domain A | 0.0003484 | Direct |
| Calcium ATPase, transmembrane domain M | 0.0003484 | Direct |
| ALDH-like | 0.0003819 | Direct |
| (Phosphotyrosine protein) phosphatases II | 0.0004282 | Direct |
| GroEL apical domain-like | 0.0004497 | Direct |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.0009242 | Direct |
| EF-hand | 0.0009927 | Direct |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Duplex) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
57850,46689
57850 - RING/U-box
46689 - Homeodomain-like | 0 | DIRECT |
55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
158702,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
81995,82919
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24 | 0 | DIRECT |
57783,47954
57783 - Zinc beta-ribbon
47954 - Cyclin-like | 0 | DIRECT |
56059,52210
56059 - Glutathione synthetase ATP-binding domain-like
52210 - Succinyl-CoA synthetase domains | 0 | DIRECT |
53383,53383
53383 - PLP-dependent transferases
53383 - PLP-dependent transferases | 0 | DIRECT |
52540,48403
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | DIRECT |
54695,50978
54695 - POZ domain
50978 - WD40 repeat-like | 0 | DIRECT |
47895,52540
47895 - Transducin (alpha subunit), insertion domain
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
50729,55961
50729 - PH domain-like
55961 - Bet v1-like | 0 | DIRECT |
54747,46906
54747 - Ribosomal L11/L12e N-terminal domain
46906 - Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
53300,81995
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
50104,50249
50104 - Translation proteins SH3-like domain
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
102848,54236
102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
54236 - Ubiquitin-like | 0 | DIRECT |
141673,50800
141673 - MOSC N-terminal domain-like
50800 - PK beta-barrel domain-like | 0 | DIRECT |
54160,54160
54160 - Chromo domain-like
54160 - Chromo domain-like | 0 | DIRECT |
50249,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
52540,47917
52540 - P-loop containing nucleoside triphosphate hydrolases
47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
57850,54928
57850 - RING/U-box
54928 - RNA-binding domain, RBD | 0 | DIRECT |
57863,48403
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | DIRECT |
48403,56112
48403 - Ankyrin repeat
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
47473,103506
47473 - EF-hand
103506 - Mitochondrial carrier | 0 | DIRECT |
53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
64356,49447
64356 - SNARE-like
49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
50249,55681
50249 - Nucleic acid-binding proteins
55681 - Class II aaRS and biotin synthetases | 0 | DIRECT |
55920,46785
55920 - Creatinase/aminopeptidase
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
54236,63491
54236 - Ubiquitin-like
63491 - BAG domain | 0 | DIRECT |
49599,54695
49599 - TRAF domain-like
54695 - POZ domain | 0 | DIRECT |
55821,142695
55821 - YrdC/RibB
142695 - RibA-like | 0 | DIRECT |
50615,52540
50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
81296,51445
81296 - E set domains
51445 - (Trans)glycosidases | 0 | DIRECT |
51230,47005
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
54534,54534
54534 - FKBP-like
54534 - FKBP-like | 0 | DIRECT |
81923,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
49899,63887
49899 - Concanavalin A-like lectins/glucanases
63887 - P-domain of calnexin/calreticulin | 0 | DIRECT |
81383,54518
81383 - F-box domain
54518 - Tubby C-terminal domain-like | 0 | DIRECT |
48371,56112
48371 - ARM repeat
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
55021,56112
55021 - ACT-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
54909,54909
54909 - Dimeric alpha+beta barrel
54909 - Dimeric alpha+beta barrel | 0 | DIRECT |
81698,81698
81698 - FF domain
81698 - FF domain | 0 | DIRECT |
56524,81296
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0 | DIRECT |
55874,52172
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | DIRECT |
48403,52540
48403 - Ankyrin repeat
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
58014,51064
58014 - Coiled-coil domain of nucleotide exchange factor GrpE
51064 - Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
52540,52058
52540 - P-loop containing nucleoside triphosphate hydrolases
52058 - L domain-like | 0 | DIRECT |
103657,50729
103657 - BAR/IMD domain-like
50729 - PH domain-like | 0 | DIRECT |
100966,75689
100966 - Translation initiation factor 2 beta, aIF2beta, N-terminal domain
75689 - Zinc-binding domain of translation initiation factor 2 beta | 0 | DIRECT |
57716,57716
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | DIRECT |
52172,52172
52172 - CheY-like
52172 - CheY-like | 0 | DIRECT |
53738,55957
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
54585,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
81296,52540
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
55545,51445
55545 - beta-N-acetylhexosaminidase-like domain
51445 - (Trans)glycosidases | 0 | DIRECT |
81631,55003
81631 - PAP/OAS1 substrate-binding domain
55003 - PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | DIRECT |
47005,52777
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | DIRECT |
158702,81296
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | DIRECT |
109604,81301
109604 - HD-domain/PDEase-like
81301 - Nucleotidyltransferase | 0 | DIRECT |
51045,51045
51045 - WW domain
51045 - WW domain | 0 | DIRECT |
81811,82754
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
46785,158702
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
53732,52016
53732 - Aconitase iron-sulfur domain
52016 - LeuD/IlvD-like | 0 | DIRECT |
56112,48371
56112 - Protein kinase-like (PK-like)
48371 - ARM repeat | 0 | DIRECT |
52025,57850
52025 - PA domain
57850 - RING/U-box | 0 | DIRECT |
51338,51556
51338 - Composite domain of metallo-dependent hydrolases
51556 - Metallo-dependent hydrolases | 0 | DIRECT |
48179,52413
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
54001,57277
54001 - Cysteine proteinases
57277 - Granulin repeat | 0 | DIRECT |
158639,63748
158639 - ENT-like
63748 - Tudor/PWWP/MBT | 0 | DIRECT |
46785,54928
46785 - "Winged helix" DNA-binding domain
54928 - RNA-binding domain, RBD | 0 | DIRECT |
52402,52833
52402 - Adenine nucleotide alpha hydrolases-like
52833 - Thioredoxin-like | 0 | DIRECT |
81995,81811
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | DIRECT |
48403,57850
48403 - Ankyrin repeat
57850 - RING/U-box | 0 | DIRECT |
54534,48452
54534 - FKBP-like
48452 - TPR-like | 0 | DIRECT |
101908,56219
101908 - Putative isomerase YbhE
56219 - DNase I-like | 0 | DIRECT |
50022,55961
50022 - ISP domain
55961 - Bet v1-like | 0 | DIRECT |
53300,57850
53300 - vWA-like
57850 - RING/U-box | 0 | DIRECT |
52425,48173
52425 - Cryptochrome/photolyase, N-terminal domain
48173 - Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
50729,57863
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | DIRECT |
49723,48484
49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)
48484 - Lipoxigenase | 0 | DIRECT |
117916,117916
117916 - Fe-S cluster assembly (FSCA) domain-like
117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | DIRECT |
82919,53300
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | DIRECT |
51905,55424
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
52540,53271
52540 - P-loop containing nucleoside triphosphate hydrolases
53271 - PRTase-like | 0 | DIRECT |
55753,55753
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins | 0 | DIRECT |
54160,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
55781,47384
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase | 0 | DIRECT |
51726,51726
51726 - UROD/MetE-like
51726 - UROD/MetE-like | 0 | DIRECT |
88946,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
82171,53474
82171 - DPP6 N-terminal domain-like
53474 - alpha/beta-Hydrolases | 0 | DIRECT |
56784,81665
56784 - HAD-like
81665 - Calcium ATPase, transmembrane domain M | 0.00008382 | DIRECT |
53067,53067
53067 - Actin-like ATPase domain
53067 - Actin-like ATPase domain | 0.0007233 | DIRECT |
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
57850,46689
57850 - RING/U-box
46689 - Homeodomain-like | 0 | Direct |
55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | Direct |
158702,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
81995,82919
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24 | 0 | Direct |
57783,47954
57783 - Zinc beta-ribbon
47954 - Cyclin-like | 0 | Direct |
56059,52210
56059 - Glutathione synthetase ATP-binding domain-like
52210 - Succinyl-CoA synthetase domains | 0 | Direct |
53383,53383
53383 - PLP-dependent transferases
53383 - PLP-dependent transferases | 0 | Direct |
52540,48403
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | Direct |
54695,50978
54695 - POZ domain
50978 - WD40 repeat-like | 0 | Direct |
47895,52540
47895 - Transducin (alpha subunit), insertion domain
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
50729,55961
50729 - PH domain-like
55961 - Bet v1-like | 0 | Direct |
54747,46906
54747 - Ribosomal L11/L12e N-terminal domain
46906 - Ribosomal protein L11, C-terminal domain | 0 | Direct |
53300,81995
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
50104,50249
50104 - Translation proteins SH3-like domain
50249 - Nucleic acid-binding proteins | 0 | Direct |
102848,54236
102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
54236 - Ubiquitin-like | 0 | Direct |
141673,50800
141673 - MOSC N-terminal domain-like
50800 - PK beta-barrel domain-like | 0 | Direct |
54160,54160
54160 - Chromo domain-like
54160 - Chromo domain-like | 0 | Direct |
50249,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
52540,47917
52540 - P-loop containing nucleoside triphosphate hydrolases
47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
57850,54928
57850 - RING/U-box
54928 - RNA-binding domain, RBD | 0 | Direct |
57863,48403
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | Direct |
48403,56112
48403 - Ankyrin repeat
56112 - Protein kinase-like (PK-like) | 0 | Direct |
47473,103506
47473 - EF-hand
103506 - Mitochondrial carrier | 0 | Direct |
53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
64356,49447
64356 - SNARE-like
49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
50249,55681
50249 - Nucleic acid-binding proteins
55681 - Class II aaRS and biotin synthetases | 0 | Direct |
55920,46785
55920 - Creatinase/aminopeptidase
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
54236,63491
54236 - Ubiquitin-like
63491 - BAG domain | 0 | Direct |
49599,54695
49599 - TRAF domain-like
54695 - POZ domain | 0 | Direct |
55821,142695
55821 - YrdC/RibB
142695 - RibA-like | 0 | Direct |
50615,52540
50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
81296,51445
81296 - E set domains
51445 - (Trans)glycosidases | 0 | Direct |
51230,47005
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
54534,54534
54534 - FKBP-like
54534 - FKBP-like | 0 | Direct |
81923,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
49899,63887
49899 - Concanavalin A-like lectins/glucanases
63887 - P-domain of calnexin/calreticulin | 0 | Direct |
81383,54518
81383 - F-box domain
54518 - Tubby C-terminal domain-like | 0 | Direct |
48371,56112
48371 - ARM repeat
56112 - Protein kinase-like (PK-like) | 0 | Direct |
55021,56112
55021 - ACT-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
54909,54909
54909 - Dimeric alpha+beta barrel
54909 - Dimeric alpha+beta barrel | 0 | Direct |
81698,81698
81698 - FF domain
81698 - FF domain | 0 | Direct |
56524,81296
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0 | Direct |
55874,52172
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | Direct |
48403,52540
48403 - Ankyrin repeat
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
58014,51064
58014 - Coiled-coil domain of nucleotide exchange factor GrpE
51064 - Head domain of nucleotide exchange factor GrpE | 0 | Direct |
52540,52058
52540 - P-loop containing nucleoside triphosphate hydrolases
52058 - L domain-like | 0 | Direct |
103657,50729
103657 - BAR/IMD domain-like
50729 - PH domain-like | 0 | Direct |
100966,75689
100966 - Translation initiation factor 2 beta, aIF2beta, N-terminal domain
75689 - Zinc-binding domain of translation initiation factor 2 beta | 0 | Direct |
57716,57716
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | Direct |
52172,52172
52172 - CheY-like
52172 - CheY-like | 0 | Direct |
53738,55957
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
54585,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
81296,52540
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
55545,51445
55545 - beta-N-acetylhexosaminidase-like domain
51445 - (Trans)glycosidases | 0 | Direct |
81631,55003
81631 - PAP/OAS1 substrate-binding domain
55003 - PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | Direct |
47005,52777
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | Direct |
158702,81296
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | Direct |
109604,81301
109604 - HD-domain/PDEase-like
81301 - Nucleotidyltransferase | 0 | Direct |
51045,51045
51045 - WW domain
51045 - WW domain | 0 | Direct |
81811,82754
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
46785,158702
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | Direct |
53732,52016
53732 - Aconitase iron-sulfur domain
52016 - LeuD/IlvD-like | 0 | Direct |
56112,48371
56112 - Protein kinase-like (PK-like)
48371 - ARM repeat | 0 | Direct |
52025,57850
52025 - PA domain
57850 - RING/U-box | 0 | Direct |
51338,51556
51338 - Composite domain of metallo-dependent hydrolases
51556 - Metallo-dependent hydrolases | 0 | Direct |
48179,52413
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
54001,57277
54001 - Cysteine proteinases
57277 - Granulin repeat | 0 | Direct |
158639,63748
158639 - ENT-like
63748 - Tudor/PWWP/MBT | 0 | Direct |
46785,54928
46785 - "Winged helix" DNA-binding domain
54928 - RNA-binding domain, RBD | 0 | Direct |
52402,52833
52402 - Adenine nucleotide alpha hydrolases-like
52833 - Thioredoxin-like | 0 | Direct |
81995,81811
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | Direct |
48403,57850
48403 - Ankyrin repeat
57850 - RING/U-box | 0 | Direct |
54534,48452
54534 - FKBP-like
48452 - TPR-like | 0 | Direct |
101908,56219
101908 - Putative isomerase YbhE
56219 - DNase I-like | 0 | Direct |
50022,55961
50022 - ISP domain
55961 - Bet v1-like | 0 | Direct |
53300,57850
53300 - vWA-like
57850 - RING/U-box | 0 | Direct |
52425,48173
52425 - Cryptochrome/photolyase, N-terminal domain
48173 - Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
50729,57863
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | Direct |
49723,48484
49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)
48484 - Lipoxigenase | 0 | Direct |
117916,117916
117916 - Fe-S cluster assembly (FSCA) domain-like
117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | Direct |
82919,53300
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | Direct |
51905,55424
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
52540,53271
52540 - P-loop containing nucleoside triphosphate hydrolases
53271 - PRTase-like | 0 | Direct |
55753,55753
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins | 0 | Direct |
54160,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
55781,47384
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase | 0 | Direct |
51726,51726
51726 - UROD/MetE-like
51726 - UROD/MetE-like | 0 | Direct |
88946,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
82171,53474
82171 - DPP6 N-terminal domain-like
53474 - alpha/beta-Hydrolases | 0 | Direct |
56784,81665
56784 - HAD-like
81665 - Calcium ATPase, transmembrane domain M | 0.00008382 | Direct |
53067,53067
53067 - Actin-like ATPase domain
53067 - Actin-like ATPase domain | 0.0007233 | Direct |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Triple) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52540,52540,46785
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
50615,52540,47917
50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
52540 - P-loop containing nucleoside triphosphate hydrolases
47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
57716,57716,57716
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | DIRECT |
54160,52540,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
57903,57903,55729
57903 - FYVE/PHD zinc finger
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | DIRECT |
81698,81698,81698
81698 - FF domain
81698 - FF domain
81698 - FF domain | 0 | DIRECT |
57783,47954,47954
57783 - Zinc beta-ribbon
47954 - Cyclin-like
47954 - Cyclin-like | 0 | DIRECT |
55781,47384,55874
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | DIRECT |
53738,53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
55973,55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
53738,53738,55957
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
90229,90229,90229
90229 - CCCH zinc finger
90229 - CCCH zinc finger
90229 - CCCH zinc finger | 0 | DIRECT |
54585,52540,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
81301,81631,55003
81301 - Nucleotidyltransferase
81631 - PAP/OAS1 substrate-binding domain
55003 - PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | DIRECT |
81995,81811,82754
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
54534,54534,48452
54534 - FKBP-like
54534 - FKBP-like
48452 - TPR-like | 0 | DIRECT |
51230,47005,52777
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | DIRECT |
81995,82919,53300
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | DIRECT |
53300,81995,81811
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | DIRECT |
46785,158702,81296
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | DIRECT |
52540,46785,158702
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
50729,57863,48403
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | DIRECT |
50249,57756,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
49562,49562,53300
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
53300 - vWA-like | 0 | DIRECT |
50692,54585,52540
50692 - ADC-like
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
81296,51445,51011
81296 - E set domains
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | DIRECT |
82919,53300,81995
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
103657,50729,57863
103657 - BAR/IMD domain-like
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | DIRECT |
46785,158702,52540
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
88946,88659,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
51735,48179,52413
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
81296,52540,48403
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | DIRECT |
81923,52540,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
54534,54534,54534
54534 - FKBP-like
54534 - FKBP-like
54534 - FKBP-like | 0 | DIRECT |
55753,55753,55753
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins | 0 | DIRECT |
47384,55874,52172
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | DIRECT |
158702,52540,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
54160,54160,52540
54160 - Chromo domain-like
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
51445,49785,49785
51445 - (Trans)glycosidases
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like | 0.0006423 | DIRECT |
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52540,52540,46785
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
50615,52540,47917
50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
52540 - P-loop containing nucleoside triphosphate hydrolases
47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
57716,57716,57716
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | Direct |
54160,52540,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
57903,57903,55729
57903 - FYVE/PHD zinc finger
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | Direct |
81698,81698,81698
81698 - FF domain
81698 - FF domain
81698 - FF domain | 0 | Direct |
57783,47954,47954
57783 - Zinc beta-ribbon
47954 - Cyclin-like
47954 - Cyclin-like | 0 | Direct |
55781,47384,55874
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | Direct |
53738,53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
55973,55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | Direct |
53738,53738,55957
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
90229,90229,90229
90229 - CCCH zinc finger
90229 - CCCH zinc finger
90229 - CCCH zinc finger | 0 | Direct |
54585,52540,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
81301,81631,55003
81301 - Nucleotidyltransferase
81631 - PAP/OAS1 substrate-binding domain
55003 - PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | Direct |
81995,81811,82754
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
54534,54534,48452
54534 - FKBP-like
54534 - FKBP-like
48452 - TPR-like | 0 | Direct |
51230,47005,52777
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | Direct |
81995,82919,53300
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | Direct |
53300,81995,81811
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | Direct |
46785,158702,81296
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | Direct |
52540,46785,158702
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | Direct |
50729,57863,48403
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | Direct |
50249,57756,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
49562,49562,53300
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
53300 - vWA-like | 0 | Direct |
50692,54585,52540
50692 - ADC-like
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
81296,51445,51011
81296 - E set domains
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | Direct |
82919,53300,81995
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
103657,50729,57863
103657 - BAR/IMD domain-like
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | Direct |
46785,158702,52540
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
88946,88659,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
51735,48179,52413
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
81296,52540,48403
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | Direct |
81923,52540,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
54534,54534,54534
54534 - FKBP-like
54534 - FKBP-like
54534 - FKBP-like | 0 | Direct |
55753,55753,55753
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins | 0 | Direct |
47384,55874,52172
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | Direct |
158702,52540,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
54160,54160,52540
54160 - Chromo domain-like
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
51445,49785,49785
51445 - (Trans)glycosidases
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like | 0.0006423 | Direct |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Plot distribution on species Tree Of Life (sTOL) for Superfamily and/or Family domains annotated by this AP term
 |
Plot tree as:
| |
Download Newick format tree:
|
( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domain
architecture data for all genomes in SUPERFAMILY. The PAUP
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
Plot distribution on species Tree Of Life (sTOL) for single supra-domains annotated by this AP term
|
Plot tree as:
| |
Download Newick format tree:
| |
Browsing in TREE OF LIFE:
|
( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
|
|
> BO Hierarchy > pollen
