SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > Genomes > Ficedula albicollis 76_1.0 > ENSFALP00000001991

Domain assignment for ENSFALP00000001991 from Ficedula albicollis 76_1.0

Domain architecture

Domain assignment details

(show help)
Strong hits

Sequence:  ENSFALP00000001991
Domain Number 1 Region: 2021-2322
Classification Level Classification E-value
Superfamily BEACH domain 3.66e-122
Family BEACH domain 0.00000000921
Further Details:      
 
Domain Number 2 Region: 2409-2692
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.56e-30
Family WD40-repeat 0.0015
Further Details:      
 
Domain Number 3 Region: 1920-2020
Classification Level Classification E-value
Superfamily PH domain-like 2.52e-24
Family PreBEACH PH-like domain 0.0066
Further Details:      
 
Domain Number 4 Region: 1011-1218,1480-1562,1595-1688,1725-1759
Classification Level Classification E-value
Superfamily ARM repeat 0.0000000033
Family Armadillo repeat 0.078
Further Details:      
 
Domain Number 5 Region: 567-709
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.00000693
Family Laminin G-like module 0.08
Further Details:      
 
Domain Number 6 Region: 719-725
Classification Level Classification E-value
Superfamily Formin homology 2 domain (FH2 domain) 0.000034
Family Formin homology 2 domain (FH2 domain) 0.13
Further Details:      
 
Weak hits

Sequence:  ENSFALP00000001991
Domain Number - Region: 303-331,363-407,453-514
Classification Level Classification E-value
Superfamily ARM repeat 0.000242
Family MIF4G domain-like 0.097
Further Details:      
 
Domain Number - Region: 48-58
Classification Level Classification E-value
Superfamily Formin homology 2 domain (FH2 domain) 0.00068
Family Formin homology 2 domain (FH2 domain) 0.13
Further Details:      
 
Domain Number - Region: 185-332,364-382
Classification Level Classification E-value
Superfamily ARM repeat 0.0428
Family Armadillo repeat 0.063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSFALP00000001991   Gene: ENSFALG00000001904   Transcript: ENSFALT00000002003
Sequence length 2729
Comment pep:known_by_projection scaffold:FicAlb_1.4:JH603388.1:42632:77625:1 gene:ENSFALG00000001904 transcript:ENSFALT00000002003 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
QKDLSYLQQWLEAFVTSFERVIALPSLEPRRWDPKTPGLPVVGTIRWPPPPPPPPPPPRD
GDRGTGLGQALLLLKFFIIICRSGTQLESRENGAQLENGAQLEKGTRPENRTQLENRTQL
ENGMLHALHLCECFLDPYQTWRRQLSGESISAKEKSKYKFAPAPLPPEFGAFFQESFQAG
KQLPETIQLRIIHLFGAILSGSKPNALQAITPAALEVLLGVLQRGGSGAPPSPALLEATL
RSVVAAVHVLHGSSPGAGPVSLRSLLDGYFRVLNSDLPAASLAPEAAGGLIALRVLMLDA
IPAMLSCQDRPVLQAVFLSNNCFEHIIRLLQNSKLYLGSSREAGEARDEVPTRNGDGLQQ
VSASSSDAIAVHALGVLTAIMSNSPSAKEVFKERIGYAHLYEVLRSQGQPTQRLLQELLN
MAVEGDHGSFPVRAIRNEQPLLILLAWLPALRCRDLQVFLSAWLRRLCEASLPSRLTCVK
AGMVGSLLGALASEPALPSACSQNLLELLRSLGSLSIRPGELRQLLPLLRRERGRAPHPY
VAPVIRALSGMARGEGAPRALQSFDLSPGMAGIMVPTIQKWPGGAFAFHAWLCLSEEEPE
PPVRPKRRQLYSFFTAGGTGFEAFFTAGGVLVVAVCTKKDYMTVALPEFAFNDSAWHCVD
IVHVAGRRPFGQNIVSIYADGHLRKTAQLRFPSLHESFTSCCIGSAGHRTTTTPPPPPPP
PPPPPPPPPPELVFPQHPVLGRSQSVPATLSPHSWTPTQLPTEGVVATTAAGSQDTEWGS
PTSLEGHLGSVAIFCEALQQAQVKALFCAGPNVTSPFTLEGDLVELSSKLLLYYTPQACR
NNICLDLSPSHGLDGRLTGHKVVNWDIKDVVNCVGGMGVLLPLLEQVVSKTEEPEEEQET
NELVGPELTSSRNAQGMLIPLGKSSESRLERNSVAAFLLLLKNFLRNHAVNQESLVQCHG
PAVIAALLHKVPGALLDMSALVASQILMEQVASEGSGLLLHLLYQHLLFDFRIWSNSDFA
VRLGHIQYLASVVKDHKQRIRRKYGVQFILDSIRTYYGTSREKTTATDDIRTVQTSLFSL
VKDFFCRSFSGEEMQSLLNYLAGAQDEQQVCGALEVIHSLLKGSPAQEQLFAFLFEPGHV
ELLFSLLVQKKFSDEVRERVFKILYKMLKYEKVPERSKSRLKLKDIGYQGLISYLSDVPG
SMLLFRCLSEQVLGADPPNYKDLVAVVYLSHRAELSIRLDICRKLFHLIYAQQDLVKQLA
RLAGWQDTLTKLYVKESYECRQHSLSTSGCPELLRLSEPQGRDRLSPPPAELQELDVFLP
LGYEASDQELSEGFSDHSISPSGRTKSFHSYNFKSFDSSDRASRSSSNPGDGAPFDGVYH
PLSPFSTSPFDLGLDLASTSSMATAESGTQTPASGPGTPSPLESFKPFPGMRARKSSSLS
NVLDESSYQDVLPSDNISNTSNPQQTPEEELCNLLTNIIFSVTWRGVEGWDEPAWRERGQ
VFSVLTKLGTACELVRPPDEIKRSLLEMMLESALTDLKESGPAALPGLTHNALKLLRLLQ
DFLFSEGHNNQALWSEKIYEGVSSLLDKLGVWHHLANGTSDLKEMAQTGLRVLLGYILLQ
DPQLHSLAYVKLHSLLQTTSAPRRDEACYLLGKLETPLRRSLDSRSETFSWLVPIIRTLM
DQCYETLQLQQFLPSLPPTNGSPTFYEDFQLFCTTPEWRGFIEKHVQPTMAQFEMDTFAR
SHDLMSNFWNACYDAMMSSSQRREQEKAASRKLFQELVLEPAAKRCKAENARHANVLKQT
NNQHSTVLKQWRSLCRLLTSPRSAWADRNPPEVRWKLSSAETYSRMRLKLVPNLNFDQHL
EASALRDNLGADHLQNPAESLPLAMAKEAKVSELEDDQLAEEDLPVLDNQAEPKEQNQRE
KLVVSEDCELITTVAVVPGRLEVTTQHVYFYDGSSEKEETEGGIGYDFKRPLSHLREVHL
RRYNLRRSALELFFIDQANYFLNFRKKVRNKVYSCILGLRPPNQTYFGSRSPQELLKASG
LTQKWVLREISNFEYLMQLNTIAGRTYNDLSQYPVFPWILRDYVSETLDLTNPAVFRDLS
KPIGVANERHARDVKEKYESFEDPTGTVDKFHYGTHYSNAAGVMHYLIRTEPFTTLHIQL
QSGRFDCSDRQFHSVPAAWQARMENPVDVKELIPEFFYFPEFLENQNGFDLGCLQLSNEK
VGDVVLPRWARSREDFIHQHRKALESEYVSAHLHEWIDLIFGYKQRGPAAVEALNVFYYC
TYEGAVDLDAITDETQRKALEGIISNFGQTPCQLLKEPHPARLSAESAARRLAQLDTRSP
NVFENLDQLKSFFVEGISDGVALVQAVVPKNQAHSFITQGSPDILVTVSANGLLGTHNWL
PYDKNISNYFSFTKDPTVTNAKTQRFLQGPFAPGADLSSRTLAVSPDGKLLFSGGHWDNS
LRVTSLAKGKVVGHITRHIDVVTCLSLDLCGIYLISGSRDTTCMVWQVLQQGGFSSGLAP
KPVQVLYGHDAEVTCVAISTELDMAVSGSKDGTIITHTVRRGLFIRSLRPPGESCPPAVL
SHLAVGPEGQVVAQTAVGQPSCSKDRFALHLYSVNGKLLSSVPLDREVTAMCLSEDFVVL
GTSECGLEIRELQSLRAAVPPVPMRVPVRSVSVTKEKSHILVGLEDGKLIVVGAGQPAEV
SGTPSQVRVGWGCGLVSPGCSQRGDIGVS
Download sequence
Identical sequences U3JGT7
ENSFALP00000001991

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.