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Plant ANatomical entity (PAN): root 
(show info)
Biomedical Ontology
Like Gene Ontology (GO), biomedical ontology such as phenotype ontology classifies and organizes gene-mutant/null phenotypic information from the very general at the top to more specific terms in the directed acyclic graph (DAG) by viewing an individual term as a node and its relations to parental terms (allowing for multiple parents) as directed edges. To navigate this hierarchy, we display all parental phenotypic terms to the current phenotypic term of interest ordered by their shortest distances to the current term. Also, only direct children phenotypic terms of the current phenotypic term are listed. Biomedical ontologies we have incorporated are as follows:
- Disease Ontology (DO) Ontology DO semantically integrates disease and medical vocabularies through extensive cross mapping of DO terms to MeSH, ICD, NCI’s thesaurus, SNOMED and OMIM.
- Human Phenotype (HP) Ontology HP captures phenotypic abnormalities that are described in OMIM, along with the corresponding disease-causing genes. It includes three complementary biological concepts: Mode_of_Inheritance (MI), ONset_and_clinical_course (ON), and Phenotypic_Abnormality (PA).
- Mouse Phenotype (MP) Ontology MP describes phenotypes of the mouse after a specific gene is genetically disrupted. Using it, Mouse Genome Informatics (MGI) provides high-coverate gene-level phenotypes for the mouse.
- Worm Phenotype (WP) Ontology WP classifies and organizes phenotype descriptions for C. elegans and other nematodes. Using it, WormBase provides primary resource for phenotype annotations for C. elegans.
- Yeast Phenotype (YP) Ontology Based on YP which is the major contributor to the ‘Ascomycete phenotype ontology’, Saccharomyces Genome Database (SGD) provides single mutant phenotypes for every gene in the yeast genome.
- Fly Phenotype (FP) Ontology FP refers to FlyBase controlled vocabulary. Specifically, a structured controlled vocabulary is used for the annotation of alleles (for their mutagen etc) in FlyBase.
- Fly Anatomy (FA) Ontology FA is a structured controlled vocabulary of the anatomy of Drosophila melanogaster, used for the description of phenotypes and where a gene is expressed.
- Zebrafish Anatomy (ZA) Ontology ZA displays anatomical terms of the zebrafish using standard anatomical nomenclature, together with affected genes.
- Xenopus Anatomy (XA) Ontology XA represents the lineage of tissues and the timing of development for frogs (Xenopus laevis and Xenopus tropicalis). It is used to annotate Xenopus gene expression patterns and mutant and morphant phenotypes.
- Arabidopsis Plant Ontology (AP) Ontology As a major contributor to Plant Ontology which describes plant anatomical and morphological structures (AN) and growth and developmental stages (DE), the Arabidopsis Information Resource (TAIR) provides arabidopsis plant ontology annotations for the model higher plant Arabidopsis thaliana.
- Enzyme Commission (EC) Ontology Each enzyme is allocated a four-digit EC number, the first three digits of which define the reaction catalysed and the fourth of which is a unique identifier (serial number). Each enzyme is also assigned a systematic name that uniquely defines the reaction catalysed.
- UniProtKB KeyWords (KW) Ontology Keywords in UniProtKB are controlled vocabulary, providing a summary of the entry content and are used to index UniProtKB/Swiss-Prot entries based on 10 categories (the category "Technical term" being excluded here). Each keyword is attributed manually to UniProtKB/Swiss-Prot entries and automatically to UniProtKB/TrEMBL entries (according to specific annotation rules).
- CTD Diseases (CD) Ontology CD is MEDIC disease vocabulary that is modified by CTD from the "Diseases" [C] branch of Medical Subject Headings (MeSH), combined with genetic disorders from the Online Mendelian Inheritance in OMIM database.
- CTD Chemicals (CC) Ontology CC is chemical vocabulary that is adapted by CTD from the "Chemicals and Drugs" category and Supplementary Concept Records of Medical Subject Headings (MeSH, a hierarchical vocabulary used to index articles for MEDLINE/PubMed).
Jump to [ Top · Hierarchy · Annotations ]
Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)
Jump to [ Top · Hierarchy ]
Superfamily( show details)
Highlighted in gray are those with FDR_all>0.001
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| Signal peptide-binding domain | 0 | DIRECT |
| Protease propeptides/inhibitors | 0 | DIRECT |
| E2F-DP heterodimerization region | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| Caspase-like | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| LysM domain | 0 | DIRECT |
| Granulin repeat | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| TATA-box binding protein-like | 0 | DIRECT |
| Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
| Phosphofructokinase | 0 | DIRECT |
| Soluble quinoprotein glucose dehydrogenase | 0 | DIRECT |
| Amidase signature (AS) enzymes | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| TGS-like | 0 | DIRECT |
| LeuD/IlvD-like | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| lambda repressor-like DNA-binding domains | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| Creatinase/aminopeptidase | 0 | DIRECT |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
| Homocysteine S-methyltransferase | 0 | DIRECT |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| Staphylococcal nuclease | 0 | DIRECT |
| Putative isomerase YbhE | 0 | DIRECT |
| YrdC/RibB | 0 | DIRECT |
| Tautomerase/MIF | 0 | DIRECT |
| L9 N-domain-like | 0 | DIRECT |
| CHY zinc finger-like | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Electron transport accessory proteins | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| Mitochondrial glycoprotein MAM33-like | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| Lysozyme-like | 0 | DIRECT |
| NAP-like | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
| ALDH-like | 0 | DIRECT |
| Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
| Isochorismatase-like hydrolases | 0 | DIRECT |
| Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| Metallo-dependent hydrolases | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| beta-N-acetylhexosaminidase-like domain | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| Chorismate mutase II | 0 | DIRECT |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
| PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | DIRECT |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| GlnB-like | 0 | DIRECT |
| Fibronectin type III | 0 | DIRECT |
| FAH | 0 | DIRECT |
| SH2 domain | 0 | DIRECT |
| Zinc hairpin stack | 0 | DIRECT |
| Heme oxygenase-like | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| Diaminopimelate epimerase-like | 0 | DIRECT |
| S13-like H2TH domain | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| DNA repair protein MutS, domain II | 0 | DIRECT |
| Ribosomal protein L16p/L10e | 0 | DIRECT |
| ssDNA-binding transcriptional regulator domain | 0 | DIRECT |
| AlbA-like | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | DIRECT |
| Flavoproteins | 0 | DIRECT |
| MOSC N-terminal domain-like | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| Seven-hairpin glycosidases | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| CYTH-like phosphatases | 0 | DIRECT |
| alpha-helical ferredoxin | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| Poly A polymerase C-terminal region-like | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| SMR domain-like | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| Creatinase/prolidase N-terminal domain | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| Peptidase/esterase 'gauge' domain | 0 | DIRECT |
| Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| ADC-like | 0 | DIRECT |
| Glycerol-3-phosphate (1)-acyltransferase | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Plant lectins/antimicrobial peptides | 0 | DIRECT |
| Tim10-like | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| Heme-dependent catalase-like | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Dimeric alpha+beta barrel | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| Globin-like | 0 | DIRECT |
| Aquaporin-like | 0.0004267 | DIRECT |
| Cullin repeat-like | 0.03985 | INHERITED FROM: lateral root primordium || root parenchyma || root stele || lateral root cap || root tip || root cortex || root endodermis |
| Trimeric LpxA-like enzymes | 0.1676 | INHERITED FROM: root stele |
| Profilin (actin-binding protein) | 0.2121 | INHERITED FROM: root tip |
| Histone-fold | 0.2184 | INHERITED FROM: lateral root primordium || lateral root tip || lateral root || lateral root apical meristem |
| Ammonium transporter | 0.2768 | INHERITED FROM: root tip |
| HD-domain/PDEase-like | 0.384 | INHERITED FROM: root stele || root syncytium cell |
| Nucleotidyltransferase | 0.4149 | INHERITED FROM: embryo root || radicle |
| Leucine zipper domain | 0.5019 | INHERITED FROM: primary root || root differentiation zone || primary root tip |
| CheY-like | 0.5516 | INHERITED FROM: root stele || root tip |
| PHL pollen allergen | 0.5685 | INHERITED FROM: lateral root || root tip |
| (Trans)glycosidases | 0.6445 | INHERITED FROM: seedling radicle || embryo root || radicle |
| Lipoxigenase | 0.6759 | INHERITED FROM: lateral root primordium |
| PAP/OAS1 substrate-binding domain | 0.6792 | INHERITED FROM: embryo root || radicle |
| Bet v1-like | 0.6962 | INHERITED FROM: primary root || root tip |
| Band 7/SPFH domain | 0.713 | INHERITED FROM: root tip |
| Barwin-like endoglucanases | 0.7476 | INHERITED FROM: lateral root || root tip |
| Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.8057 | INHERITED FROM: lateral root primordium |
| MFS general substrate transporter | 0.8254 | INHERITED FROM: root cortex |
| Skp1 dimerisation domain-like | 1 | INHERITED FROM: primary root || lateral root |
| HLH, helix-loop-helix DNA-binding domain | 1 | INHERITED FROM: primary root |
| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 1 | INHERITED FROM: lateral root primordium || lateral root tip || lateral root |
| Subtilisin-like | 1 | INHERITED FROM: root stele |
| UDP-Glycosyltransferase/glycogen phosphorylase | 1 | INHERITED FROM: lateral root primordium || root tip |
| beta-beta-alpha zinc fingers | 1 | INHERITED FROM: primary root || root tip |
| SRF-like | 1 | INHERITED FROM: root parenchyma || root cap |
| NAC domain | 1 | INHERITED FROM: root parenchyma || root stele || primary root || root differentiation zone || root tip |
| Homeodomain-like | 1 | INHERITED FROM: root stele || primary root || transition zone || lateral root || root tip |
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| Signal peptide-binding domain | 0 | Direct |
| Protease propeptides/inhibitors | 0 | Direct |
| E2F-DP heterodimerization region | 0 | Direct |
| SH3-domain | 0 | Direct |
| Caspase-like | 0 | Direct |
| RraA-like | 0 | Direct |
| LysM domain | 0 | Direct |
| Granulin repeat | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| TATA-box binding protein-like | 0 | Direct |
| Composite domain of metallo-dependent hydrolases | 0 | Direct |
| Phosphofructokinase | 0 | Direct |
| Soluble quinoprotein glucose dehydrogenase | 0 | Direct |
| Amidase signature (AS) enzymes | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| TGS-like | 0 | Direct |
| LeuD/IlvD-like | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| lambda repressor-like DNA-binding domains | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| Creatinase/aminopeptidase | 0 | Direct |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
| Homocysteine S-methyltransferase | 0 | Direct |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| Staphylococcal nuclease | 0 | Direct |
| Putative isomerase YbhE | 0 | Direct |
| YrdC/RibB | 0 | Direct |
| Tautomerase/MIF | 0 | Direct |
| L9 N-domain-like | 0 | Direct |
| CHY zinc finger-like | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Electron transport accessory proteins | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| Mitochondrial glycoprotein MAM33-like | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| Lysozyme-like | 0 | Direct |
| NAP-like | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| BolA-like | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
| ALDH-like | 0 | Direct |
| Peptidyl-tRNA hydrolase-like | 0 | Direct |
| Isochorismatase-like hydrolases | 0 | Direct |
| Expressed protein At2g23090/F21P24.15 | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| Metallo-dependent hydrolases | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| beta-N-acetylhexosaminidase-like domain | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| Chorismate mutase II | 0 | Direct |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
| PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | Direct |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
| FF domain | 0 | Direct |
| GlnB-like | 0 | Direct |
| Fibronectin type III | 0 | Direct |
| FAH | 0 | Direct |
| SH2 domain | 0 | Direct |
| Zinc hairpin stack | 0 | Direct |
| Heme oxygenase-like | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| Diaminopimelate epimerase-like | 0 | Direct |
| S13-like H2TH domain | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| DNA repair protein MutS, domain II | 0 | Direct |
| Ribosomal protein L16p/L10e | 0 | Direct |
| ssDNA-binding transcriptional regulator domain | 0 | Direct |
| AlbA-like | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | Direct |
| Flavoproteins | 0 | Direct |
| MOSC N-terminal domain-like | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | Direct |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| eIF1-like | 0 | Direct |
| Seven-hairpin glycosidases | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| CYTH-like phosphatases | 0 | Direct |
| alpha-helical ferredoxin | 0 | Direct |
| R3H domain | 0 | Direct |
| Poly A polymerase C-terminal region-like | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| SMR domain-like | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| Creatinase/prolidase N-terminal domain | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| Peptidase/esterase 'gauge' domain | 0 | Direct |
| Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| ADC-like | 0 | Direct |
| Glycerol-3-phosphate (1)-acyltransferase | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| Plant lectins/antimicrobial peptides | 0 | Direct |
| Tim10-like | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
| RibA-like | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| NHL repeat | 0 | Direct |
| HesB-like domain | 0 | Direct |
| Heme-dependent catalase-like | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Dimeric alpha+beta barrel | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| Globin-like | 0 | Direct |
| Aquaporin-like | 0.0004267 | Direct |
| Cullin repeat-like | 0.03985 | Inherited |
| Trimeric LpxA-like enzymes | 0.1676 | Inherited |
| Profilin (actin-binding protein) | 0.2121 | Inherited |
| Histone-fold | 0.2184 | Inherited |
| Ammonium transporter | 0.2768 | Inherited |
| HD-domain/PDEase-like | 0.384 | Inherited |
| Nucleotidyltransferase | 0.4149 | Inherited |
| Leucine zipper domain | 0.5019 | Inherited |
| CheY-like | 0.5516 | Inherited |
| PHL pollen allergen | 0.5685 | Inherited |
| (Trans)glycosidases | 0.6445 | Inherited |
| Lipoxigenase | 0.6759 | Inherited |
| PAP/OAS1 substrate-binding domain | 0.6792 | Inherited |
| Bet v1-like | 0.6962 | Inherited |
| Band 7/SPFH domain | 0.713 | Inherited |
| Barwin-like endoglucanases | 0.7476 | Inherited |
| Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.8057 | Inherited |
| MFS general substrate transporter | 0.8254 | Inherited |
| Skp1 dimerisation domain-like | 1 | Inherited |
| HLH, helix-loop-helix DNA-binding domain | 1 | Inherited |
| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 1 | Inherited |
| Subtilisin-like | 1 | Inherited |
| UDP-Glycosyltransferase/glycogen phosphorylase | 1 | Inherited |
| beta-beta-alpha zinc fingers | 1 | Inherited |
| SRF-like | 1 | Inherited |
| NAC domain | 1 | Inherited |
| Homeodomain-like | 1 | Inherited |
LINKTO: Domain2BO Download and Domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Family( show details)
Highlighted in gray are those with FDR_all>0.001
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| DNA repair glycosylase, 2 C-terminal domains | 0 | DIRECT |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| Cystathionine synthase-like | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| Pseudouridine synthase II TruB | 0 | DIRECT |
| Heme-dependent catalases | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
| DNase I-like | 0 | DIRECT |
| Glycerol-3-phosphate dehydrogenase | 0 | DIRECT |
| Aminoacid dehydrogenases | 0 | DIRECT |
| NADPH-cytochrome p450 reductase-like | 0 | DIRECT |
| gamma-carbonic anhydrase-like | 0 | DIRECT |
| Macro domain | 0 | DIRECT |
| SH2 domain | 0 | DIRECT |
| Hypoxia-inducible factor HIF ihhibitor (FIH1) | 0 | DIRECT |
| NAD kinase-like | 0 | DIRECT |
| Phosphoenolpyruvate carboxylase | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| LeuD-like | 0 | DIRECT |
| Prolyl oligopeptidase, N-terminal domain | 0 | DIRECT |
| Allosteric chorismate mutase | 0 | DIRECT |
| Tim10/DDP | 0 | DIRECT |
| G domain-linked domain | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | DIRECT |
| Poly A polymerase C-terminal region-like | 0 | DIRECT |
| Trunk domain of Sec23/24 | 0 | DIRECT |
| RWD domain | 0 | DIRECT |
| CoA-binding domain | 0 | DIRECT |
| PAPS reductase-like | 0 | DIRECT |
| (Glycosyl)asparaginase | 0 | DIRECT |
| Spermidine synthase | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| HMGL-like | 0 | DIRECT |
| Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Homoserine dehydrogenase-like | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), intermediate domain | 0 | DIRECT |
| HAT/Suf repeat | 0 | DIRECT |
| UDP-glucose pyrophosphorylase | 0 | DIRECT |
| Fibronectin type III | 0 | DIRECT |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| E2F dimerization segment | 0 | DIRECT |
| CHY zinc finger | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), apical domain | 0 | DIRECT |
| Serine acetyltransferase | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| Rps19E-like | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| ZZ domain | 0 | DIRECT |
| Methionine aminopeptidase, insert domain | 0 | DIRECT |
| GABARAP-like | 0 | DIRECT |
| L30e/L7ae ribosomal proteins | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Poly A polymerase head domain-like | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| Transcriptional coactivator PC4 C-terminal domain | 0 | DIRECT |
| Mitochondrial glycoprotein MAM33-like | 0 | DIRECT |
| Single-domain sulfurtransferase | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain | 0 | DIRECT |
| glucose-1-phosphate thymidylyltransferase | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| La domain | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), catalytic domain | 0 | DIRECT |
| GAF domain | 0 | DIRECT |
| PaaI/YdiI-like | 0 | DIRECT |
| Branched-chain alpha-keto acid dehydrogenase Pyr module | 0 | DIRECT |
| L23p | 0 | DIRECT |
| Zinc hairpin stack | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| MioX-like | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| Myf domain | 0 | DIRECT |
| FAH | 0 | DIRECT |
| Plant stress-induced protein | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| Ribosomal protein S13 | 0 | DIRECT |
| Family 19 glycosidase | 0 | DIRECT |
| Hypothetical protein HI1317 | 0 | DIRECT |
| Ubiquitin carboxyl-terminal hydrolase UCH-L | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| rRNA adenine dimethylase-like | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| LysM domain | 0 | DIRECT |
| MoCo carrier protein-like | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| Subtilase propeptides/inhibitors | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| Predicted hydrolases Cof | 0 | DIRECT |
| Cytidylyltransferase | 0 | DIRECT |
| HEAT repeat | 0 | DIRECT |
| Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| Homocysteine S-methyltransferase | 0 | DIRECT |
| Glycerol-3-phosphate transporter | 0 | DIRECT |
| Chromo barrel domain | 0 | DIRECT |
| B56-like | 0 | DIRECT |
| Amidase signature (AS) enzymes | 0 | DIRECT |
| NAP-like | 0 | DIRECT |
| Ribosomal protein S27e | 0 | DIRECT |
| Ribosomal protein L10e | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| BAR domain | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| DNA polymerase processivity factor | 0 | DIRECT |
| Arginine methyltransferase | 0 | DIRECT |
| Cystatins | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| Ribosomal protein S15 | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| ATP sulfurylase N-terminal domain | 0 | DIRECT |
| MIF-related | 0 | DIRECT |
| Ran-binding domain | 0 | DIRECT |
| Creatinase/aminopeptidase | 0 | DIRECT |
| Class-II DAHP synthetase | 0 | DIRECT |
| beta-N-acetylhexosaminidase catalytic domain | 0 | DIRECT |
| Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| Smr domain | 0 | DIRECT |
| Eps15 homology domain (EH domain) | 0 | DIRECT |
| Receiver domain of the ethylene receptor | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| Clp protease, ClpP subunit | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | DIRECT |
| RNA methyltransferase FtsJ | 0 | DIRECT |
| Choline kinase | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| RNB domain-like | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| 5' nucleotidase-like | 0 | DIRECT |
| MYND zinc finger | 0 | DIRECT |
| Poly(A) polymerase, PAP, middle domain | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| Acyl-ACP thioesterase-like | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| Lesion bypass DNA polymerase (Y-family), catalytic domain | 0 | DIRECT |
| Enolase | 0 | DIRECT |
| NadC N-terminal domain-like | 0 | DIRECT |
| RNase Z-like | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | DIRECT |
| Adenosine-5'phosphosulfate kinase (APS kinase) | 0 | DIRECT |
| AMPK-beta glycogen binding domain-like | 0 | DIRECT |
| Tail specific protease, catalytic domain | 0 | DIRECT |
| Glyoxalase I (lactoylglutathione lyase) | 0 | DIRECT |
| Folylpolyglutamate synthetase | 0 | DIRECT |
| Sec63 C-terminal domain-like | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| GroES | 0 | DIRECT |
| Class I alpha-1;2-mannosidase, catalytic domain | 0 | DIRECT |
| Smc hinge domain | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| Cdc48 N-terminal domain-like | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| Gamma-glutamyltranspeptidase-like | 0 | DIRECT |
| Granulin repeat | 0 | DIRECT |
| LEA14-like | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), ATPase domain | 0 | DIRECT |
| Staphylococcal nuclease | 0 | DIRECT |
| Cytochrome b5 | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| Cytochrome p450 reductase N-terminal domain-like | 0 | DIRECT |
| N-type ATP pyrophosphatases | 0 | DIRECT |
| IPP isomerase-like | 0 | DIRECT |
| Prolyl oligopeptidase, C-terminal domain | 0 | DIRECT |
| Shikimate kinase (AroK) | 0 | DIRECT |
| GlmU C-terminal domain-like | 0 | DIRECT |
| Signal peptide-binding domain | 0 | DIRECT |
| D-ribulose-5-phosphate 3-epimerase | 0 | DIRECT |
| Poly(A) polymerase, PAP, N-terminal domain | 0 | DIRECT |
| ALDH-like | 0 | DIRECT |
| Eukaryotic type heme oxygenase | 0 | DIRECT |
| NadC C-terminal domain-like | 0 | DIRECT |
| SelR domain | 0 | DIRECT |
| 2Fe-2S ferredoxin-related | 0 | DIRECT |
| Sedlin (SEDL) | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| PdxS-like | 0 | DIRECT |
| Ribosomal protein L3 | 0 | DIRECT |
| Plant transcriptional regulator PBF-2 | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| Poly(ADP-ribose) polymerase, C-terminal domain | 0 | DIRECT |
| Phosphofructokinase | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| CAT-like | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | DIRECT |
| FucT-like | 0 | DIRECT |
| Calnexin/calreticulin | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | DIRECT |
| WrbA-like | 0 | DIRECT |
| GDI-like N domain | 0 | DIRECT |
| Hypothetical protein At2g34160 | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| BphP N-terminal domain-like | 0 | DIRECT |
| Isochorismatase-like hydrolases | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| STAR domain | 0 | DIRECT |
| PhzC/PhzF-like | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| ATP sulfurylase catalytic domain | 0 | DIRECT |
| Cell cycle arrest protein BUB3 | 0 | DIRECT |
| PUA domain | 0 | DIRECT |
| PCI domain (PINT motif) | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| N-acetyl-l-glutamate kinase | 0 | DIRECT |
| HAL/PAL-like | 0 | DIRECT |
| Phytochrome-specific domain | 0 | DIRECT |
| Poly(A) polymerase, PAP, C-terminal domain | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Biotin dependent carboxylase carboxyltransferase domain | 0 | DIRECT |
| Ribosomal protein L37e | 0 | DIRECT |
| EDF1-like | 0 | DIRECT |
| SufE-like | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| Soluble quinoprotein glucose dehydrogenase | 0 | DIRECT |
| Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | DIRECT |
| TRM1-like | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| Cofactor-dependent phosphoglycerate mutase | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| beta-sandwich domain of Sec23/24 | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| Molybdenum cofactor biosynthesis protein MoeB | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| NADPH-cytochrome p450 reductase FAD-binding domain-like | 0 | DIRECT |
| eIF5a N-terminal domain-like | 0 | DIRECT |
| Leukotriene A4 hydrolase catalytic domain | 0 | DIRECT |
| Protein prenyltransferases | 0 | DIRECT |
| Sec63 N-terminal domain | 0 | DIRECT |
| YicI N-terminal domain-like | 0 | DIRECT |
| Nitrogenase iron protein-like | 0.0004758 | DIRECT |
| Aquaporin-like | 0.0004789 | DIRECT |
| Canonical RBD | 0.0006504 | DIRECT |
| Exocyst complex component | 0.107 | INHERITED FROM: lateral root primordium || root parenchyma || root stele || root vascular system || lateral root cap || root tip || root cortex || root endodermis |
| Trehalose-phosphatase | 0.1761 | INHERITED FROM: root tip |
| Profilin (actin-binding protein) | 0.2061 | INHERITED FROM: root tip |
| Ammonium transporter | 0.2696 | INHERITED FROM: root tip |
| Nucleosome core histones | 0.3098 | INHERITED FROM: lateral root primordium || lateral root tip || lateral root || root tip || lateral root apical meristem |
| Leucine zipper domain | 0.4943 | INHERITED FROM: primary root || root differentiation zone || pericycle || primary root tip |
| Trehalose-6-phosphate synthase, OtsA | 0.4973 | INHERITED FROM: root tip |
| PHL pollen allergen | 0.5564 | INHERITED FROM: lateral root || root tip |
| Pollen allergen PHL P 1 N-terminal domain | 0.5862 | INHERITED FROM: lateral root || root tip |
| Plant lipoxigenases | 0.6623 | INHERITED FROM: lateral root primordium |
| Lipoxigenase N-terminal domain | 0.6623 | INHERITED FROM: lateral root primordium |
| CheY-related | 0.871 | INHERITED FROM: root tip |
| Myb/SANT domain | 1 | INHERITED FROM: lateral root |
| SRF-like | 1 | INHERITED FROM: root parenchyma || root cap |
| NAC domain | 1 | INHERITED FROM: root parenchyma || root stele || primary root || root differentiation zone || root tip |
| Homeodomain | 1 | INHERITED FROM: root stele || primary root || root differentiation zone || root tip || root cortex |
| Plant lipid-transfer and hydrophobic proteins | 1 | INHERITED FROM: lateral root primordium || lateral root tip || lateral root || root tip |
| Skp1 dimerisation domain-like | 1 | INHERITED FROM: primary root |
| Subtilases | 1 | INHERITED FROM: root stele |
| HLH, helix-loop-helix DNA-binding domain | 1 | INHERITED FROM: primary root |
| beta-glycanases | 1 | INHERITED FROM: seedling radicle || embryo root || radicle |
| ABC transporter ATPase domain-like | 1 | INHERITED FROM: root parenchyma |
| UDPGT-like | 1 | INHERITED FROM: lateral root primordium |
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| DNA repair glycosylase, 2 C-terminal domains | 0 | Direct |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| Cystathionine synthase-like | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| FF domain | 0 | Direct |
| Pseudouridine synthase II TruB | 0 | Direct |
| Heme-dependent catalases | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
| DNase I-like | 0 | Direct |
| Glycerol-3-phosphate dehydrogenase | 0 | Direct |
| Aminoacid dehydrogenases | 0 | Direct |
| NADPH-cytochrome p450 reductase-like | 0 | Direct |
| gamma-carbonic anhydrase-like | 0 | Direct |
| Macro domain | 0 | Direct |
| SH2 domain | 0 | Direct |
| Hypoxia-inducible factor HIF ihhibitor (FIH1) | 0 | Direct |
| NAD kinase-like | 0 | Direct |
| Phosphoenolpyruvate carboxylase | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| LeuD-like | 0 | Direct |
| Prolyl oligopeptidase, N-terminal domain | 0 | Direct |
| Allosteric chorismate mutase | 0 | Direct |
| Tim10/DDP | 0 | Direct |
| G domain-linked domain | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | Direct |
| Poly A polymerase C-terminal region-like | 0 | Direct |
| Trunk domain of Sec23/24 | 0 | Direct |
| RWD domain | 0 | Direct |
| CoA-binding domain | 0 | Direct |
| PAPS reductase-like | 0 | Direct |
| (Glycosyl)asparaginase | 0 | Direct |
| Spermidine synthase | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| HMGL-like | 0 | Direct |
| Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Homoserine dehydrogenase-like | 0 | Direct |
| Group II chaperonin (CCT, TRIC), intermediate domain | 0 | Direct |
| HAT/Suf repeat | 0 | Direct |
| UDP-glucose pyrophosphorylase | 0 | Direct |
| Fibronectin type III | 0 | Direct |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| E2F dimerization segment | 0 | Direct |
| CHY zinc finger | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | 0 | Direct |
| Group II chaperonin (CCT, TRIC), apical domain | 0 | Direct |
| Serine acetyltransferase | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| Rps19E-like | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| ZZ domain | 0 | Direct |
| Methionine aminopeptidase, insert domain | 0 | Direct |
| GABARAP-like | 0 | Direct |
| L30e/L7ae ribosomal proteins | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Poly A polymerase head domain-like | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| Transcriptional coactivator PC4 C-terminal domain | 0 | Direct |
| Mitochondrial glycoprotein MAM33-like | 0 | Direct |
| Single-domain sulfurtransferase | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain | 0 | Direct |
| glucose-1-phosphate thymidylyltransferase | 0 | Direct |
| HesB-like domain | 0 | Direct |
| La domain | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), catalytic domain | 0 | Direct |
| GAF domain | 0 | Direct |
| PaaI/YdiI-like | 0 | Direct |
| Branched-chain alpha-keto acid dehydrogenase Pyr module | 0 | Direct |
| L23p | 0 | Direct |
| Zinc hairpin stack | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| MioX-like | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| Myf domain | 0 | Direct |
| FAH | 0 | Direct |
| Plant stress-induced protein | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| Ribosomal protein S13 | 0 | Direct |
| Family 19 glycosidase | 0 | Direct |
| Hypothetical protein HI1317 | 0 | Direct |
| Ubiquitin carboxyl-terminal hydrolase UCH-L | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| rRNA adenine dimethylase-like | 0 | Direct |
| SH3-domain | 0 | Direct |
| LysM domain | 0 | Direct |
| MoCo carrier protein-like | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| Subtilase propeptides/inhibitors | 0 | Direct |
| R3H domain | 0 | Direct |
| Predicted hydrolases Cof | 0 | Direct |
| Cytidylyltransferase | 0 | Direct |
| HEAT repeat | 0 | Direct |
| Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | Direct |
| RraA-like | 0 | Direct |
| Homocysteine S-methyltransferase | 0 | Direct |
| Glycerol-3-phosphate transporter | 0 | Direct |
| Chromo barrel domain | 0 | Direct |
| B56-like | 0 | Direct |
| Amidase signature (AS) enzymes | 0 | Direct |
| NAP-like | 0 | Direct |
| Ribosomal protein S27e | 0 | Direct |
| Ribosomal protein L10e | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| BAR domain | 0 | Direct |
| RibA-like | 0 | Direct |
| DNA polymerase processivity factor | 0 | Direct |
| Arginine methyltransferase | 0 | Direct |
| Cystatins | 0 | Direct |
| BolA-like | 0 | Direct |
| Ribosomal protein S15 | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| ATP sulfurylase N-terminal domain | 0 | Direct |
| MIF-related | 0 | Direct |
| Ran-binding domain | 0 | Direct |
| Creatinase/aminopeptidase | 0 | Direct |
| Class-II DAHP synthetase | 0 | Direct |
| beta-N-acetylhexosaminidase catalytic domain | 0 | Direct |
| Peptidyl-tRNA hydrolase-like | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| Smr domain | 0 | Direct |
| Eps15 homology domain (EH domain) | 0 | Direct |
| Receiver domain of the ethylene receptor | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| Clp protease, ClpP subunit | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | Direct |
| RNA methyltransferase FtsJ | 0 | Direct |
| Choline kinase | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| RNB domain-like | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| 5' nucleotidase-like | 0 | Direct |
| MYND zinc finger | 0 | Direct |
| Poly(A) polymerase, PAP, middle domain | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| Acyl-ACP thioesterase-like | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| Lesion bypass DNA polymerase (Y-family), catalytic domain | 0 | Direct |
| Enolase | 0 | Direct |
| NadC N-terminal domain-like | 0 | Direct |
| RNase Z-like | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | Direct |
| Adenosine-5'phosphosulfate kinase (APS kinase) | 0 | Direct |
| AMPK-beta glycogen binding domain-like | 0 | Direct |
| Tail specific protease, catalytic domain | 0 | Direct |
| Glyoxalase I (lactoylglutathione lyase) | 0 | Direct |
| Folylpolyglutamate synthetase | 0 | Direct |
| Sec63 C-terminal domain-like | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| GroES | 0 | Direct |
| Class I alpha-1;2-mannosidase, catalytic domain | 0 | Direct |
| Smc hinge domain | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| Cdc48 N-terminal domain-like | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| Gamma-glutamyltranspeptidase-like | 0 | Direct |
| Granulin repeat | 0 | Direct |
| LEA14-like | 0 | Direct |
| Group II chaperonin (CCT, TRIC), ATPase domain | 0 | Direct |
| Staphylococcal nuclease | 0 | Direct |
| Cytochrome b5 | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| Cytochrome p450 reductase N-terminal domain-like | 0 | Direct |
| N-type ATP pyrophosphatases | 0 | Direct |
| IPP isomerase-like | 0 | Direct |
| Prolyl oligopeptidase, C-terminal domain | 0 | Direct |
| Shikimate kinase (AroK) | 0 | Direct |
| GlmU C-terminal domain-like | 0 | Direct |
| Signal peptide-binding domain | 0 | Direct |
| D-ribulose-5-phosphate 3-epimerase | 0 | Direct |
| Poly(A) polymerase, PAP, N-terminal domain | 0 | Direct |
| ALDH-like | 0 | Direct |
| Eukaryotic type heme oxygenase | 0 | Direct |
| NadC C-terminal domain-like | 0 | Direct |
| SelR domain | 0 | Direct |
| 2Fe-2S ferredoxin-related | 0 | Direct |
| Sedlin (SEDL) | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| PdxS-like | 0 | Direct |
| Ribosomal protein L3 | 0 | Direct |
| Plant transcriptional regulator PBF-2 | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| Poly(ADP-ribose) polymerase, C-terminal domain | 0 | Direct |
| Phosphofructokinase | 0 | Direct |
| NHL repeat | 0 | Direct |
| CAT-like | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | Direct |
| FucT-like | 0 | Direct |
| Calnexin/calreticulin | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | Direct |
| WrbA-like | 0 | Direct |
| GDI-like N domain | 0 | Direct |
| Hypothetical protein At2g34160 | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| BphP N-terminal domain-like | 0 | Direct |
| Isochorismatase-like hydrolases | 0 | Direct |
| eIF1-like | 0 | Direct |
| STAR domain | 0 | Direct |
| PhzC/PhzF-like | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| ATP sulfurylase catalytic domain | 0 | Direct |
| Cell cycle arrest protein BUB3 | 0 | Direct |
| PUA domain | 0 | Direct |
| PCI domain (PINT motif) | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| N-acetyl-l-glutamate kinase | 0 | Direct |
| HAL/PAL-like | 0 | Direct |
| Phytochrome-specific domain | 0 | Direct |
| Poly(A) polymerase, PAP, C-terminal domain | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| Biotin dependent carboxylase carboxyltransferase domain | 0 | Direct |
| Ribosomal protein L37e | 0 | Direct |
| EDF1-like | 0 | Direct |
| SufE-like | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| Soluble quinoprotein glucose dehydrogenase | 0 | Direct |
| Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | Direct |
| TRM1-like | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| Cofactor-dependent phosphoglycerate mutase | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| beta-sandwich domain of Sec23/24 | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| Molybdenum cofactor biosynthesis protein MoeB | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| NADPH-cytochrome p450 reductase FAD-binding domain-like | 0 | Direct |
| eIF5a N-terminal domain-like | 0 | Direct |
| Leukotriene A4 hydrolase catalytic domain | 0 | Direct |
| Protein prenyltransferases | 0 | Direct |
| Sec63 N-terminal domain | 0 | Direct |
| YicI N-terminal domain-like | 0 | Direct |
| Nitrogenase iron protein-like | 0.0004758 | Direct |
| Aquaporin-like | 0.0004789 | Direct |
| Canonical RBD | 0.0006504 | Direct |
| Exocyst complex component | 0.107 | Inherited |
| Trehalose-phosphatase | 0.1761 | Inherited |
| Profilin (actin-binding protein) | 0.2061 | Inherited |
| Ammonium transporter | 0.2696 | Inherited |
| Nucleosome core histones | 0.3098 | Inherited |
| Leucine zipper domain | 0.4943 | Inherited |
| Trehalose-6-phosphate synthase, OtsA | 0.4973 | Inherited |
| PHL pollen allergen | 0.5564 | Inherited |
| Pollen allergen PHL P 1 N-terminal domain | 0.5862 | Inherited |
| Plant lipoxigenases | 0.6623 | Inherited |
| Lipoxigenase N-terminal domain | 0.6623 | Inherited |
| CheY-related | 0.871 | Inherited |
| Myb/SANT domain | 1 | Inherited |
| SRF-like | 1 | Inherited |
| NAC domain | 1 | Inherited |
| Homeodomain | 1 | Inherited |
| Plant lipid-transfer and hydrophobic proteins | 1 | Inherited |
| Skp1 dimerisation domain-like | 1 | Inherited |
| Subtilases | 1 | Inherited |
| HLH, helix-loop-helix DNA-binding domain | 1 | Inherited |
| beta-glycanases | 1 | Inherited |
| ABC transporter ATPase domain-like | 1 | Inherited |
| UDPGT-like | 1 | Inherited |
LINKTO: Domain2BO Download and Domain2BO Algorithm
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Supra-domain (Single)( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| SH2 domain | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| Amidase signature (AS) enzymes | 0 | DIRECT |
| Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| Diaminopimelate epimerase-like | 0 | DIRECT |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| CYTH-like phosphatases | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
| Isochorismatase-like hydrolases | 0 | DIRECT |
| Dimeric alpha+beta barrel | 0 | DIRECT |
| PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| Lysozyme-like | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| Tautomerase/MIF | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| NAP-like | 0 | DIRECT |
| Creatinase/prolidase N-terminal domain | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| Granulin repeat | 0 | DIRECT |
| Homocysteine S-methyltransferase | 0 | DIRECT |
| Caspase-like | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| Glycerol-3-phosphate (1)-acyltransferase | 0 | DIRECT |
| ssDNA-binding transcriptional regulator domain | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| LysM domain | 0 | DIRECT |
| CHY zinc finger-like | 0 | DIRECT |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| L9 N-domain-like | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Electron transport accessory proteins | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| Tim10-like | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| Metallo-dependent hydrolases | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| lambda repressor-like DNA-binding domains | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| Peptidase/esterase 'gauge' domain | 0 | DIRECT |
| TGS-like | 0 | DIRECT |
| Globin-like | 0 | DIRECT |
| Creatinase/aminopeptidase | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| E2F-DP heterodimerization region | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| Staphylococcal nuclease | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| LeuD/IlvD-like | 0 | DIRECT |
| Plant lectins/antimicrobial peptides | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| MOSC N-terminal domain-like | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| AlbA-like | 0 | DIRECT |
| Mitochondrial glycoprotein MAM33-like | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | 0 | DIRECT |
| ADC-like | 0 | DIRECT |
| GlnB-like | 0 | DIRECT |
| SMR domain-like | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | DIRECT |
| Soluble quinoprotein glucose dehydrogenase | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| ALDH-like | 0 | DIRECT |
| Phosphofructokinase | 0 | DIRECT |
| YrdC/RibB | 0 | DIRECT |
| Flavoproteins | 0 | DIRECT |
| Poly A polymerase C-terminal region-like | 0 | DIRECT |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
| S13-like H2TH domain | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| Ribosomal protein L16p/L10e | 0 | DIRECT |
| beta-N-acetylhexosaminidase-like domain | 0 | DIRECT |
| Fibronectin type III | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| Chorismate mutase II | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
| Putative isomerase YbhE | 0 | DIRECT |
| Protease propeptides/inhibitors | 0 | DIRECT |
| Signal peptide-binding domain | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| TATA-box binding protein-like | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| alpha-helical ferredoxin | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| DNA repair protein MutS, domain II | 0 | DIRECT |
| Heme-dependent catalase-like | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| Heme oxygenase-like | 0 | DIRECT |
| Zinc hairpin stack | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| FAH | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| Seven-hairpin glycosidases | 0 | DIRECT |
| Aquaporin-like | 0.0003365 | DIRECT |
| Cullin repeat-like | 0.03331 | INHERITED FROM: lateral root cap || root parenchyma || root stele || root endodermis || root tip || lateral root primordium || root cortex |
| Trimeric LpxA-like enzymes | 0.1494 | INHERITED FROM: root stele |
| Profilin (actin-binding protein) | 0.1916 | INHERITED FROM: root tip |
| Histone-fold | 0.1976 | INHERITED FROM: lateral root || lateral root apical meristem || lateral root tip || lateral root primordium |
| Ammonium transporter | 0.2542 | INHERITED FROM: root tip |
| HD-domain/PDEase-like | 0.3599 | INHERITED FROM: root syncytium cell || root stele |
| Nucleotidyltransferase | 0.3911 | INHERITED FROM: radicle || embryo root |
| Leucine zipper domain | 0.4775 | INHERITED FROM: root differentiation zone || primary root || primary root tip |
| CheY-like | 0.5271 | INHERITED FROM: root stele || root tip |
| PHL pollen allergen | 0.544 | INHERITED FROM: lateral root || root tip |
| (Trans)glycosidases | 0.6195 | INHERITED FROM: radicle || embryo root || seedling radicle |
| Lipoxigenase | 0.6516 | INHERITED FROM: lateral root primordium |
| PAP/OAS1 substrate-binding domain | 0.6551 | INHERITED FROM: radicle || embryo root |
| Bet v1-like | 0.6719 | INHERITED FROM: primary root || root tip |
| Band 7/SPFH domain | 0.6888 | INHERITED FROM: root tip |
| Barwin-like endoglucanases | 0.724 | INHERITED FROM: lateral root || root tip |
| Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.7841 | INHERITED FROM: lateral root primordium |
| MFS general substrate transporter | 0.8044 | INHERITED FROM: root cortex |
| NAC domain | 1 | INHERITED FROM: root differentiation zone || root parenchyma || root stele || primary root || root tip |
| HLH, helix-loop-helix DNA-binding domain | 1 | INHERITED FROM: primary root |
| Skp1 dimerisation domain-like | 1 | INHERITED FROM: lateral root || primary root |
| beta-beta-alpha zinc fingers | 1 | INHERITED FROM: primary root || root tip |
| Homeodomain-like | 1 | INHERITED FROM: lateral root || root differentiation zone || root stele || primary root || root tip || transition zone |
| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 1 | INHERITED FROM: lateral root || lateral root tip || lateral root primordium |
| SRF-like | 1 | INHERITED FROM: root cap || root parenchyma |
| UDP-Glycosyltransferase/glycogen phosphorylase | 1 | INHERITED FROM: root tip || lateral root primordium |
| Subtilisin-like | 1 | INHERITED FROM: root stele |
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| SH2 domain | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| Amidase signature (AS) enzymes | 0 | Direct |
| Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| Diaminopimelate epimerase-like | 0 | Direct |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| CYTH-like phosphatases | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
| Isochorismatase-like hydrolases | 0 | Direct |
| Dimeric alpha+beta barrel | 0 | Direct |
| PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| Peptidyl-tRNA hydrolase-like | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| Lysozyme-like | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| Tautomerase/MIF | 0 | Direct |
| RraA-like | 0 | Direct |
| NAP-like | 0 | Direct |
| Creatinase/prolidase N-terminal domain | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| Composite domain of metallo-dependent hydrolases | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| Granulin repeat | 0 | Direct |
| Homocysteine S-methyltransferase | 0 | Direct |
| Caspase-like | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| Glycerol-3-phosphate (1)-acyltransferase | 0 | Direct |
| ssDNA-binding transcriptional regulator domain | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| LysM domain | 0 | Direct |
| CHY zinc finger-like | 0 | Direct |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
| NHL repeat | 0 | Direct |
| RibA-like | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| L9 N-domain-like | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| Electron transport accessory proteins | 0 | Direct |
| BolA-like | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| Tim10-like | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| HesB-like domain | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| Metallo-dependent hydrolases | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| lambda repressor-like DNA-binding domains | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| Peptidase/esterase 'gauge' domain | 0 | Direct |
| TGS-like | 0 | Direct |
| Globin-like | 0 | Direct |
| Creatinase/aminopeptidase | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| FF domain | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | Direct |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| E2F-DP heterodimerization region | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| Staphylococcal nuclease | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| LeuD/IlvD-like | 0 | Direct |
| Plant lectins/antimicrobial peptides | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| MOSC N-terminal domain-like | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| AlbA-like | 0 | Direct |
| Mitochondrial glycoprotein MAM33-like | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | 0 | Direct |
| ADC-like | 0 | Direct |
| GlnB-like | 0 | Direct |
| SMR domain-like | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | Direct |
| Soluble quinoprotein glucose dehydrogenase | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| ALDH-like | 0 | Direct |
| Phosphofructokinase | 0 | Direct |
| YrdC/RibB | 0 | Direct |
| Flavoproteins | 0 | Direct |
| Poly A polymerase C-terminal region-like | 0 | Direct |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
| S13-like H2TH domain | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| Ribosomal protein L16p/L10e | 0 | Direct |
| beta-N-acetylhexosaminidase-like domain | 0 | Direct |
| Fibronectin type III | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| Chorismate mutase II | 0 | Direct |
| eIF1-like | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| SH3-domain | 0 | Direct |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
| Putative isomerase YbhE | 0 | Direct |
| Protease propeptides/inhibitors | 0 | Direct |
| Signal peptide-binding domain | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| TATA-box binding protein-like | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| Expressed protein At2g23090/F21P24.15 | 0 | Direct |
| R3H domain | 0 | Direct |
| alpha-helical ferredoxin | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| DNA repair protein MutS, domain II | 0 | Direct |
| Heme-dependent catalase-like | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| Heme oxygenase-like | 0 | Direct |
| Zinc hairpin stack | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| FAH | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| Seven-hairpin glycosidases | 0 | Direct |
| Aquaporin-like | 0.0003365 | Direct |
| Cullin repeat-like | 0.03331 | Inherited |
| Trimeric LpxA-like enzymes | 0.1494 | Inherited |
| Profilin (actin-binding protein) | 0.1916 | Inherited |
| Histone-fold | 0.1976 | Inherited |
| Ammonium transporter | 0.2542 | Inherited |
| HD-domain/PDEase-like | 0.3599 | Inherited |
| Nucleotidyltransferase | 0.3911 | Inherited |
| Leucine zipper domain | 0.4775 | Inherited |
| CheY-like | 0.5271 | Inherited |
| PHL pollen allergen | 0.544 | Inherited |
| (Trans)glycosidases | 0.6195 | Inherited |
| Lipoxigenase | 0.6516 | Inherited |
| PAP/OAS1 substrate-binding domain | 0.6551 | Inherited |
| Bet v1-like | 0.6719 | Inherited |
| Band 7/SPFH domain | 0.6888 | Inherited |
| Barwin-like endoglucanases | 0.724 | Inherited |
| Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.7841 | Inherited |
| MFS general substrate transporter | 0.8044 | Inherited |
| NAC domain | 1 | Inherited |
| HLH, helix-loop-helix DNA-binding domain | 1 | Inherited |
| Skp1 dimerisation domain-like | 1 | Inherited |
| beta-beta-alpha zinc fingers | 1 | Inherited |
| Homeodomain-like | 1 | Inherited |
| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 1 | Inherited |
| SRF-like | 1 | Inherited |
| UDP-Glycosyltransferase/glycogen phosphorylase | 1 | Inherited |
| Subtilisin-like | 1 | Inherited |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Duplex) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
55781,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
52540,48403
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | DIRECT |
81995,82919
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24 | 0 | DIRECT |
52540,47446
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | DIRECT |
81811,82754
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
52540,52317
52540 - P-loop containing nucleoside triphosphate hydrolases
52317 - Class I glutamine amidotransferase-like | 0 | DIRECT |
117916,117916
117916 - Fe-S cluster assembly (FSCA) domain-like
117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | DIRECT |
81995,81811
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | DIRECT |
53300,57850
53300 - vWA-like
57850 - RING/U-box | 0 | DIRECT |
47661,58038
47661 - t-snare proteins
58038 - SNARE fusion complex | 0 | DIRECT |
55920,46785
55920 - Creatinase/aminopeptidase
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
158702,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
50692,54585
50692 - ADC-like
54585 - Cdc48 domain 2-like | 0 | DIRECT |
48179,52413
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
88798,50249
88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE)
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
101908,56219
101908 - Putative isomerase YbhE
56219 - DNase I-like | 0 | DIRECT |
103657,50729
103657 - BAR/IMD domain-like
50729 - PH domain-like | 0 | DIRECT |
81324,47473
81324 - Voltage-gated potassium channels
47473 - EF-hand | 0 | DIRECT |
54980,54980
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
49599,54695
49599 - TRAF domain-like
54695 - POZ domain | 0 | DIRECT |
81296,52540
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
56672,100879
56672 - DNA/RNA polymerases
100879 - Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
56784,54427
56784 - HAD-like
54427 - NTF2-like | 0 | DIRECT |
52425,48173
52425 - Cryptochrome/photolyase, N-terminal domain
48173 - Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
102848,54236
102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
54236 - Ubiquitin-like | 0 | DIRECT |
51905,56425
51905 - FAD/NAD(P)-binding domain
56425 - Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | DIRECT |
56219,56219
56219 - DNase I-like
56219 - DNase I-like | 0 | DIRECT |
81923,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
158639,63748
158639 - ENT-like
63748 - Tudor/PWWP/MBT | 0 | DIRECT |
49899,63887
49899 - Concanavalin A-like lectins/glucanases
63887 - P-domain of calnexin/calreticulin | 0 | DIRECT |
50156,52096
50156 - PDZ domain-like
52096 - ClpP/crotonase | 0 | DIRECT |
47895,52540
47895 - Transducin (alpha subunit), insertion domain
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
53738,55957
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
55781,47384
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase | 0 | DIRECT |
82185,82185
82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | DIRECT |
46689,51905
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain | 0 | DIRECT |
50249,55681
50249 - Nucleic acid-binding proteins
55681 - Class II aaRS and biotin synthetases | 0 | DIRECT |
81301,81891
81301 - Nucleotidyltransferase
81891 - Poly A polymerase C-terminal region-like | 0 | DIRECT |
46785,144074
46785 - "Winged helix" DNA-binding domain
144074 - E2F-DP heterodimerization region | 0 | DIRECT |
53850,55021
53850 - Periplasmic binding protein-like II
55021 - ACT-like | 0 | DIRECT |
46609,54719
46609 - Fe,Mn superoxide dismutase (SOD), N-terminal domain
54719 - Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | DIRECT |
55785,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like | 0 | DIRECT |
50104,50249
50104 - Translation proteins SH3-like domain
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
81324,81324
81324 - Voltage-gated potassium channels
81324 - Voltage-gated potassium channels | 0 | DIRECT |
51338,51556
51338 - Composite domain of metallo-dependent hydrolases
51556 - Metallo-dependent hydrolases | 0 | DIRECT |
88697,82199
88697 - PUA domain-like
82199 - SET domain | 0 | DIRECT |
51230,47005
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
54695,48452
54695 - POZ domain
48452 - TPR-like | 0 | DIRECT |
55545,51445
55545 - beta-N-acetylhexosaminidase-like domain
51445 - (Trans)glycosidases | 0 | DIRECT |
51905,55424
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
55874,52172
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | DIRECT |
52540,48340
52540 - P-loop containing nucleoside triphosphate hydrolases
48340 - Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
55781,55781
55781 - GAF domain-like
55781 - GAF domain-like | 0 | DIRECT |
55821,142695
55821 - YrdC/RibB
142695 - RibA-like | 0 | DIRECT |
51905,47473
51905 - FAD/NAD(P)-binding domain
47473 - EF-hand | 0 | DIRECT |
50249,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
161219,161245
161219 - CHY zinc finger-like
161245 - Zinc hairpin stack | 0 | DIRECT |
54160,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52540,52058
52540 - P-loop containing nucleoside triphosphate hydrolases
52058 - L domain-like | 0 | DIRECT |
47364,52540
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
81383,54518
81383 - F-box domain
54518 - Tubby C-terminal domain-like | 0 | DIRECT |
51045,51045
51045 - WW domain
51045 - WW domain | 0 | DIRECT |
56059,52210
56059 - Glutathione synthetase ATP-binding domain-like
52210 - Succinyl-CoA synthetase domains | 0 | DIRECT |
57850,57933
57850 - RING/U-box
57933 - TAZ domain | 0 | DIRECT |
81296,51445
81296 - E set domains
51445 - (Trans)glycosidases | 0 | DIRECT |
55785,55785
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
141673,50800
141673 - MOSC N-terminal domain-like
50800 - PK beta-barrel domain-like | 0 | DIRECT |
52540,90002
52540 - P-loop containing nucleoside triphosphate hydrolases
90002 - Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
47005,52777
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | DIRECT |
54747,46906
54747 - Ribosomal L11/L12e N-terminal domain
46906 - Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
63737,55486
63737 - Leukotriene A4 hydrolase N-terminal domain
55486 - Metalloproteases ("zincins"), catalytic domain | 0 | DIRECT |
88697,52374
88697 - PUA domain-like
52374 - Nucleotidylyl transferase | 0 | DIRECT |
50993,53474
50993 - Peptidase/esterase 'gauge' domain
53474 - alpha/beta-Hydrolases | 0 | DIRECT |
52402,52833
52402 - Adenine nucleotide alpha hydrolases-like
52833 - Thioredoxin-like | 0 | DIRECT |
101690,69065
101690 - PAZ domain
69065 - RNase III domain-like | 0 | DIRECT |
100950,75445
100950 - NagB/RpiA/CoA transferase-like
75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
82919,53300
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | DIRECT |
46785,54928
46785 - "Winged helix" DNA-binding domain
54928 - RNA-binding domain, RBD | 0 | DIRECT |
47473,51695
47473 - EF-hand
51695 - PLC-like phosphodiesterases | 0 | DIRECT |
50729,55961
50729 - PH domain-like
55961 - Bet v1-like | 0 | DIRECT |
52172,52172
52172 - CheY-like
52172 - CheY-like | 0 | DIRECT |
55021,56112
55021 - ACT-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
57016,53955
57016 - Plant lectins/antimicrobial peptides
53955 - Lysozyme-like | 0 | DIRECT |
54585,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
57850,54928
57850 - RING/U-box
54928 - RNA-binding domain, RBD | 0 | DIRECT |
50729,57863
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | DIRECT |
48403,52540
48403 - Ankyrin repeat
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
64356,49447
64356 - SNARE-like
49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
81698,81698
81698 - FF domain
81698 - FF domain | 0 | DIRECT |
52025,57850
52025 - PA domain
57850 - RING/U-box | 0 | DIRECT |
48403,57850
48403 - Ankyrin repeat
57850 - RING/U-box | 0 | DIRECT |
54695,48403
54695 - POZ domain
48403 - Ankyrin repeat | 0 | DIRECT |
52743,52025
52743 - Subtilisin-like
52025 - PA domain | 0 | DIRECT |
53732,52016
53732 - Aconitase iron-sulfur domain
52016 - LeuD/IlvD-like | 0 | DIRECT |
158702,81296
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | DIRECT |
46785,158702
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
53300,81995
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
82171,53474
82171 - DPP6 N-terminal domain-like
53474 - alpha/beta-Hydrolases | 0 | DIRECT |
55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
52540,81271
52540 - P-loop containing nucleoside triphosphate hydrolases
81271 - TGS-like | 0 | DIRECT |
101238,46934
101238 - XPC-binding domain
46934 - UBA-like | 0 | DIRECT |
52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | DIRECT |
47473,103506
47473 - EF-hand
103506 - Mitochondrial carrier | 0 | DIRECT |
54897,52743
54897 - Protease propeptides/inhibitors
52743 - Subtilisin-like | 0 | DIRECT |
53448,51161
53448 - Nucleotide-diphospho-sugar transferases
51161 - Trimeric LpxA-like enzymes | 0 | DIRECT |
57863,48403
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | DIRECT |
54909,54909
54909 - Dimeric alpha+beta barrel
54909 - Dimeric alpha+beta barrel | 0 | DIRECT |
46689,46785
46689 - Homeodomain-like
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
54534,54534
54534 - FKBP-like
54534 - FKBP-like | 0 | DIRECT |
81631,55003
81631 - PAP/OAS1 substrate-binding domain
55003 - PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | DIRECT |
55785,81383
55785 - PYP-like sensor domain (PAS domain)
81383 - F-box domain | 0 | DIRECT |
56524,81296
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0 | DIRECT |
54001,57277
54001 - Cysteine proteinases
57277 - Granulin repeat | 0 | DIRECT |
53383,53383
53383 - PLP-dependent transferases
53383 - PLP-dependent transferases | 0 | DIRECT |
54171,101936
54171 - DNA-binding domain
101936 - DNA-binding pseudobarrel domain | 0 | DIRECT |
161245,57850
161245 - Zinc hairpin stack
57850 - RING/U-box | 0 | DIRECT |
54534,48452
54534 - FKBP-like
48452 - TPR-like | 0 | DIRECT |
58014,51064
58014 - Coiled-coil domain of nucleotide exchange factor GrpE
51064 - Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
50685,49590
50685 - Barwin-like endoglucanases
49590 - PHL pollen allergen | 0.544 | INHERITED FROM: lateral root || root tip |
49723,48484
49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)
48484 - Lipoxigenase | 0.6516 | INHERITED FROM: lateral root primordium |
81301,81631
81301 - Nucleotidyltransferase
81631 - PAP/OAS1 substrate-binding domain | 0.6551 | INHERITED FROM: radicle || embryo root |
52172,46689
52172 - CheY-like
46689 - Homeodomain-like | 0.694 | INHERITED FROM: root tip |
53756,56784
53756 - UDP-Glycosyltransferase/glycogen phosphorylase
56784 - HAD-like | 0.7841 | INHERITED FROM: root tip |
54695,81382
54695 - POZ domain
81382 - Skp1 dimerisation domain-like | 1 | INHERITED FROM: lateral root || primary root |
55961,55961
55961 - Bet v1-like
55961 - Bet v1-like | 1 | INHERITED FROM: root tip |
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
55781,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
52540,48403
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | Direct |
81995,82919
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24 | 0 | Direct |
52540,47446
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | Direct |
81811,82754
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
52540,52317
52540 - P-loop containing nucleoside triphosphate hydrolases
52317 - Class I glutamine amidotransferase-like | 0 | Direct |
117916,117916
117916 - Fe-S cluster assembly (FSCA) domain-like
117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | Direct |
81995,81811
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | Direct |
53300,57850
53300 - vWA-like
57850 - RING/U-box | 0 | Direct |
47661,58038
47661 - t-snare proteins
58038 - SNARE fusion complex | 0 | Direct |
55920,46785
55920 - Creatinase/aminopeptidase
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
158702,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
50692,54585
50692 - ADC-like
54585 - Cdc48 domain 2-like | 0 | Direct |
48179,52413
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
88798,50249
88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE)
50249 - Nucleic acid-binding proteins | 0 | Direct |
101908,56219
101908 - Putative isomerase YbhE
56219 - DNase I-like | 0 | Direct |
103657,50729
103657 - BAR/IMD domain-like
50729 - PH domain-like | 0 | Direct |
81324,47473
81324 - Voltage-gated potassium channels
47473 - EF-hand | 0 | Direct |
54980,54980
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | Direct |
49599,54695
49599 - TRAF domain-like
54695 - POZ domain | 0 | Direct |
81296,52540
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
56672,100879
56672 - DNA/RNA polymerases
100879 - Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
56784,54427
56784 - HAD-like
54427 - NTF2-like | 0 | Direct |
52425,48173
52425 - Cryptochrome/photolyase, N-terminal domain
48173 - Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
102848,54236
102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
54236 - Ubiquitin-like | 0 | Direct |
51905,56425
51905 - FAD/NAD(P)-binding domain
56425 - Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | Direct |
56219,56219
56219 - DNase I-like
56219 - DNase I-like | 0 | Direct |
81923,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
158639,63748
158639 - ENT-like
63748 - Tudor/PWWP/MBT | 0 | Direct |
49899,63887
49899 - Concanavalin A-like lectins/glucanases
63887 - P-domain of calnexin/calreticulin | 0 | Direct |
50156,52096
50156 - PDZ domain-like
52096 - ClpP/crotonase | 0 | Direct |
47895,52540
47895 - Transducin (alpha subunit), insertion domain
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
53738,55957
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
55781,47384
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase | 0 | Direct |
82185,82185
82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | Direct |
46689,51905
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain | 0 | Direct |
50249,55681
50249 - Nucleic acid-binding proteins
55681 - Class II aaRS and biotin synthetases | 0 | Direct |
81301,81891
81301 - Nucleotidyltransferase
81891 - Poly A polymerase C-terminal region-like | 0 | Direct |
46785,144074
46785 - "Winged helix" DNA-binding domain
144074 - E2F-DP heterodimerization region | 0 | Direct |
53850,55021
53850 - Periplasmic binding protein-like II
55021 - ACT-like | 0 | Direct |
46609,54719
46609 - Fe,Mn superoxide dismutase (SOD), N-terminal domain
54719 - Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | Direct |
55785,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like | 0 | Direct |
50104,50249
50104 - Translation proteins SH3-like domain
50249 - Nucleic acid-binding proteins | 0 | Direct |
81324,81324
81324 - Voltage-gated potassium channels
81324 - Voltage-gated potassium channels | 0 | Direct |
51338,51556
51338 - Composite domain of metallo-dependent hydrolases
51556 - Metallo-dependent hydrolases | 0 | Direct |
88697,82199
88697 - PUA domain-like
82199 - SET domain | 0 | Direct |
51230,47005
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
54695,48452
54695 - POZ domain
48452 - TPR-like | 0 | Direct |
55545,51445
55545 - beta-N-acetylhexosaminidase-like domain
51445 - (Trans)glycosidases | 0 | Direct |
51905,55424
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
55874,52172
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | Direct |
52540,48340
52540 - P-loop containing nucleoside triphosphate hydrolases
48340 - Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
55781,55781
55781 - GAF domain-like
55781 - GAF domain-like | 0 | Direct |
55821,142695
55821 - YrdC/RibB
142695 - RibA-like | 0 | Direct |
51905,47473
51905 - FAD/NAD(P)-binding domain
47473 - EF-hand | 0 | Direct |
50249,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
161219,161245
161219 - CHY zinc finger-like
161245 - Zinc hairpin stack | 0 | Direct |
54160,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52540,52058
52540 - P-loop containing nucleoside triphosphate hydrolases
52058 - L domain-like | 0 | Direct |
47364,52540
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
81383,54518
81383 - F-box domain
54518 - Tubby C-terminal domain-like | 0 | Direct |
51045,51045
51045 - WW domain
51045 - WW domain | 0 | Direct |
56059,52210
56059 - Glutathione synthetase ATP-binding domain-like
52210 - Succinyl-CoA synthetase domains | 0 | Direct |
57850,57933
57850 - RING/U-box
57933 - TAZ domain | 0 | Direct |
81296,51445
81296 - E set domains
51445 - (Trans)glycosidases | 0 | Direct |
55785,55785
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
141673,50800
141673 - MOSC N-terminal domain-like
50800 - PK beta-barrel domain-like | 0 | Direct |
52540,90002
52540 - P-loop containing nucleoside triphosphate hydrolases
90002 - Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
47005,52777
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | Direct |
54747,46906
54747 - Ribosomal L11/L12e N-terminal domain
46906 - Ribosomal protein L11, C-terminal domain | 0 | Direct |
63737,55486
63737 - Leukotriene A4 hydrolase N-terminal domain
55486 - Metalloproteases ("zincins"), catalytic domain | 0 | Direct |
88697,52374
88697 - PUA domain-like
52374 - Nucleotidylyl transferase | 0 | Direct |
50993,53474
50993 - Peptidase/esterase 'gauge' domain
53474 - alpha/beta-Hydrolases | 0 | Direct |
52402,52833
52402 - Adenine nucleotide alpha hydrolases-like
52833 - Thioredoxin-like | 0 | Direct |
101690,69065
101690 - PAZ domain
69065 - RNase III domain-like | 0 | Direct |
100950,75445
100950 - NagB/RpiA/CoA transferase-like
75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
82919,53300
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | Direct |
46785,54928
46785 - "Winged helix" DNA-binding domain
54928 - RNA-binding domain, RBD | 0 | Direct |
47473,51695
47473 - EF-hand
51695 - PLC-like phosphodiesterases | 0 | Direct |
50729,55961
50729 - PH domain-like
55961 - Bet v1-like | 0 | Direct |
52172,52172
52172 - CheY-like
52172 - CheY-like | 0 | Direct |
55021,56112
55021 - ACT-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
57016,53955
57016 - Plant lectins/antimicrobial peptides
53955 - Lysozyme-like | 0 | Direct |
54585,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
57850,54928
57850 - RING/U-box
54928 - RNA-binding domain, RBD | 0 | Direct |
50729,57863
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | Direct |
48403,52540
48403 - Ankyrin repeat
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
64356,49447
64356 - SNARE-like
49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
81698,81698
81698 - FF domain
81698 - FF domain | 0 | Direct |
52025,57850
52025 - PA domain
57850 - RING/U-box | 0 | Direct |
48403,57850
48403 - Ankyrin repeat
57850 - RING/U-box | 0 | Direct |
54695,48403
54695 - POZ domain
48403 - Ankyrin repeat | 0 | Direct |
52743,52025
52743 - Subtilisin-like
52025 - PA domain | 0 | Direct |
53732,52016
53732 - Aconitase iron-sulfur domain
52016 - LeuD/IlvD-like | 0 | Direct |
158702,81296
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | Direct |
46785,158702
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | Direct |
53300,81995
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
82171,53474
82171 - DPP6 N-terminal domain-like
53474 - alpha/beta-Hydrolases | 0 | Direct |
55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | Direct |
52540,81271
52540 - P-loop containing nucleoside triphosphate hydrolases
81271 - TGS-like | 0 | Direct |
101238,46934
101238 - XPC-binding domain
46934 - UBA-like | 0 | Direct |
52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | Direct |
47473,103506
47473 - EF-hand
103506 - Mitochondrial carrier | 0 | Direct |
54897,52743
54897 - Protease propeptides/inhibitors
52743 - Subtilisin-like | 0 | Direct |
53448,51161
53448 - Nucleotide-diphospho-sugar transferases
51161 - Trimeric LpxA-like enzymes | 0 | Direct |
57863,48403
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | Direct |
54909,54909
54909 - Dimeric alpha+beta barrel
54909 - Dimeric alpha+beta barrel | 0 | Direct |
46689,46785
46689 - Homeodomain-like
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
54534,54534
54534 - FKBP-like
54534 - FKBP-like | 0 | Direct |
81631,55003
81631 - PAP/OAS1 substrate-binding domain
55003 - PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | Direct |
55785,81383
55785 - PYP-like sensor domain (PAS domain)
81383 - F-box domain | 0 | Direct |
56524,81296
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0 | Direct |
54001,57277
54001 - Cysteine proteinases
57277 - Granulin repeat | 0 | Direct |
53383,53383
53383 - PLP-dependent transferases
53383 - PLP-dependent transferases | 0 | Direct |
54171,101936
54171 - DNA-binding domain
101936 - DNA-binding pseudobarrel domain | 0 | Direct |
161245,57850
161245 - Zinc hairpin stack
57850 - RING/U-box | 0 | Direct |
54534,48452
54534 - FKBP-like
48452 - TPR-like | 0 | Direct |
58014,51064
58014 - Coiled-coil domain of nucleotide exchange factor GrpE
51064 - Head domain of nucleotide exchange factor GrpE | 0 | Direct |
50685,49590
50685 - Barwin-like endoglucanases
49590 - PHL pollen allergen | 0.544 | Inherited |
49723,48484
49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)
48484 - Lipoxigenase | 0.6516 | Inherited |
81301,81631
81301 - Nucleotidyltransferase
81631 - PAP/OAS1 substrate-binding domain | 0.6551 | Inherited |
52172,46689
52172 - CheY-like
46689 - Homeodomain-like | 0.694 | Inherited |
53756,56784
53756 - UDP-Glycosyltransferase/glycogen phosphorylase
56784 - HAD-like | 0.7841 | Inherited |
54695,81382
54695 - POZ domain
81382 - Skp1 dimerisation domain-like | 1 | Inherited |
55961,55961
55961 - Bet v1-like
55961 - Bet v1-like | 1 | Inherited |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Triple) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
50692,54585,52540
50692 - ADC-like
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
55781,47384,55874
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | DIRECT |
90229,90229,90229
90229 - CCCH zinc finger
90229 - CCCH zinc finger
90229 - CCCH zinc finger | 0 | DIRECT |
52833,52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | DIRECT |
50447,54980,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
54160,52540,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
158702,52540,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
50729,57863,48403
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | DIRECT |
81698,81698,81698
81698 - FF domain
81698 - FF domain
81698 - FF domain | 0 | DIRECT |
82919,53300,81995
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
46785,158702,52540
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
47384,55874,52172
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | DIRECT |
63411,63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | DIRECT |
51905,51905,47473
51905 - FAD/NAD(P)-binding domain
51905 - FAD/NAD(P)-binding domain
47473 - EF-hand | 0 | DIRECT |
47473,51695,49562
47473 - EF-hand
51695 - PLC-like phosphodiesterases
49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | DIRECT |
54160,54160,52540
54160 - Chromo domain-like
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
49785,49785,51445
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like
51445 - (Trans)glycosidases | 0 | DIRECT |
46785,158702,81296
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | DIRECT |
81301,81631,55003
81301 - Nucleotidyltransferase
81631 - PAP/OAS1 substrate-binding domain
55003 - PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | DIRECT |
50249,57756,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
55781,55785,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
161219,161245,57850
161219 - CHY zinc finger-like
161245 - Zinc hairpin stack
57850 - RING/U-box | 0 | DIRECT |
57850,57850,57933
57850 - RING/U-box
57850 - RING/U-box
57933 - TAZ domain | 0 | DIRECT |
81995,81811,82754
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
47364,52540,47446
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | DIRECT |
54585,52540,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
81383,117281,117281
81383 - F-box domain
117281 - Kelch motif
117281 - Kelch motif | 0 | DIRECT |
54534,54534,54534
54534 - FKBP-like
54534 - FKBP-like
54534 - FKBP-like | 0 | DIRECT |
81296,52540,48403
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | DIRECT |
54534,54534,48452
54534 - FKBP-like
54534 - FKBP-like
48452 - TPR-like | 0 | DIRECT |
55785,81383,117281
55785 - PYP-like sensor domain (PAS domain)
81383 - F-box domain
117281 - Kelch motif | 0 | DIRECT |
55785,55781,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
55781 - GAF domain-like | 0 | DIRECT |
52540,46785,158702
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
103657,50729,57863
103657 - BAR/IMD domain-like
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | DIRECT |
52540,52540,46785
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
81296,51445,51011
81296 - E set domains
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | DIRECT |
51735,48179,52413
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
46689,51905,54373
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain
54373 - FAD-linked reductases, C-terminal domain | 0 | DIRECT |
51230,47005,52777
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | DIRECT |
81923,52540,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
81324,81324,47473
81324 - Voltage-gated potassium channels
81324 - Voltage-gated potassium channels
47473 - EF-hand | 0 | DIRECT |
57903,57903,55729
57903 - FYVE/PHD zinc finger
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | DIRECT |
54695,48452,48452
54695 - POZ domain
48452 - TPR-like
48452 - TPR-like | 0 | DIRECT |
81995,82919,53300
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | DIRECT |
53300,81995,81811
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | DIRECT |
55973,55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
53738,53738,55957
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
55781,55781,55785
55781 - GAF domain-like
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
52047,52058,56112
52047 - RNI-like
52058 - L domain-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
49562,49562,49562
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | DIRECT |
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
50692,54585,52540
50692 - ADC-like
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
55781,47384,55874
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | Direct |
90229,90229,90229
90229 - CCCH zinc finger
90229 - CCCH zinc finger
90229 - CCCH zinc finger | 0 | Direct |
52833,52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | Direct |
50447,54980,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | Direct |
54160,52540,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
158702,52540,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
50729,57863,48403
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | Direct |
81698,81698,81698
81698 - FF domain
81698 - FF domain
81698 - FF domain | 0 | Direct |
82919,53300,81995
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
46785,158702,52540
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
47384,55874,52172
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | Direct |
63411,63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | Direct |
51905,51905,47473
51905 - FAD/NAD(P)-binding domain
51905 - FAD/NAD(P)-binding domain
47473 - EF-hand | 0 | Direct |
47473,51695,49562
47473 - EF-hand
51695 - PLC-like phosphodiesterases
49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | Direct |
54160,54160,52540
54160 - Chromo domain-like
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
49785,49785,51445
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like
51445 - (Trans)glycosidases | 0 | Direct |
46785,158702,81296
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | Direct |
81301,81631,55003
81301 - Nucleotidyltransferase
81631 - PAP/OAS1 substrate-binding domain
55003 - PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0 | Direct |
50249,57756,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
55781,55785,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
161219,161245,57850
161219 - CHY zinc finger-like
161245 - Zinc hairpin stack
57850 - RING/U-box | 0 | Direct |
57850,57850,57933
57850 - RING/U-box
57850 - RING/U-box
57933 - TAZ domain | 0 | Direct |
81995,81811,82754
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
47364,52540,47446
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | Direct |
54585,52540,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
81383,117281,117281
81383 - F-box domain
117281 - Kelch motif
117281 - Kelch motif | 0 | Direct |
54534,54534,54534
54534 - FKBP-like
54534 - FKBP-like
54534 - FKBP-like | 0 | Direct |
81296,52540,48403
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | Direct |
54534,54534,48452
54534 - FKBP-like
54534 - FKBP-like
48452 - TPR-like | 0 | Direct |
55785,81383,117281
55785 - PYP-like sensor domain (PAS domain)
81383 - F-box domain
117281 - Kelch motif | 0 | Direct |
55785,55781,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
55781 - GAF domain-like | 0 | Direct |
52540,46785,158702
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | Direct |
103657,50729,57863
103657 - BAR/IMD domain-like
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | Direct |
52540,52540,46785
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
81296,51445,51011
81296 - E set domains
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | Direct |
51735,48179,52413
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
46689,51905,54373
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain
54373 - FAD-linked reductases, C-terminal domain | 0 | Direct |
51230,47005,52777
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | Direct |
81923,52540,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
81324,81324,47473
81324 - Voltage-gated potassium channels
81324 - Voltage-gated potassium channels
47473 - EF-hand | 0 | Direct |
57903,57903,55729
57903 - FYVE/PHD zinc finger
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | Direct |
54695,48452,48452
54695 - POZ domain
48452 - TPR-like
48452 - TPR-like | 0 | Direct |
81995,82919,53300
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | Direct |
53300,81995,81811
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | Direct |
55973,55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | Direct |
53738,53738,55957
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
55781,55781,55785
55781 - GAF domain-like
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
52047,52058,56112
52047 - RNI-like
52058 - L domain-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
49562,49562,49562
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | Direct |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Plot distribution on species Tree Of Life (sTOL) for Superfamily and/or Family domains annotated by this AP term
 |
Plot tree as:
| |
Download Newick format tree:
|
( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domain
architecture data for all genomes in SUPERFAMILY. The PAUP
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
Plot distribution on species Tree Of Life (sTOL) for single supra-domains annotated by this AP term
|
Plot tree as:
| |
Download Newick format tree:
| |
Browsing in TREE OF LIFE:
|
( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
|
|
> BO Hierarchy > root
