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Plant structure DEvelopment stage (PDE): LP.02 two leaves visible stage 
(show info)
Biomedical Ontology
Like Gene Ontology (GO), biomedical ontology such as phenotype ontology classifies and organizes gene-mutant/null phenotypic information from the very general at the top to more specific terms in the directed acyclic graph (DAG) by viewing an individual term as a node and its relations to parental terms (allowing for multiple parents) as directed edges. To navigate this hierarchy, we display all parental phenotypic terms to the current phenotypic term of interest ordered by their shortest distances to the current term. Also, only direct children phenotypic terms of the current phenotypic term are listed. Biomedical ontologies we have incorporated are as follows:
- Disease Ontology (DO) Ontology DO semantically integrates disease and medical vocabularies through extensive cross mapping of DO terms to MeSH, ICD, NCI’s thesaurus, SNOMED and OMIM.
- Human Phenotype (HP) Ontology HP captures phenotypic abnormalities that are described in OMIM, along with the corresponding disease-causing genes. It includes three complementary biological concepts: Mode_of_Inheritance (MI), ONset_and_clinical_course (ON), and Phenotypic_Abnormality (PA).
- Mouse Phenotype (MP) Ontology MP describes phenotypes of the mouse after a specific gene is genetically disrupted. Using it, Mouse Genome Informatics (MGI) provides high-coverate gene-level phenotypes for the mouse.
- Worm Phenotype (WP) Ontology WP classifies and organizes phenotype descriptions for C. elegans and other nematodes. Using it, WormBase provides primary resource for phenotype annotations for C. elegans.
- Yeast Phenotype (YP) Ontology Based on YP which is the major contributor to the ‘Ascomycete phenotype ontology’, Saccharomyces Genome Database (SGD) provides single mutant phenotypes for every gene in the yeast genome.
- Fly Phenotype (FP) Ontology FP refers to FlyBase controlled vocabulary. Specifically, a structured controlled vocabulary is used for the annotation of alleles (for their mutagen etc) in FlyBase.
- Fly Anatomy (FA) Ontology FA is a structured controlled vocabulary of the anatomy of Drosophila melanogaster, used for the description of phenotypes and where a gene is expressed.
- Zebrafish Anatomy (ZA) Ontology ZA displays anatomical terms of the zebrafish using standard anatomical nomenclature, together with affected genes.
- Xenopus Anatomy (XA) Ontology XA represents the lineage of tissues and the timing of development for frogs (Xenopus laevis and Xenopus tropicalis). It is used to annotate Xenopus gene expression patterns and mutant and morphant phenotypes.
- Arabidopsis Plant Ontology (AP) Ontology As a major contributor to Plant Ontology which describes plant anatomical and morphological structures (AN) and growth and developmental stages (DE), the Arabidopsis Information Resource (TAIR) provides arabidopsis plant ontology annotations for the model higher plant Arabidopsis thaliana.
- Enzyme Commission (EC) Ontology Each enzyme is allocated a four-digit EC number, the first three digits of which define the reaction catalysed and the fourth of which is a unique identifier (serial number). Each enzyme is also assigned a systematic name that uniquely defines the reaction catalysed.
- UniProtKB KeyWords (KW) Ontology Keywords in UniProtKB are controlled vocabulary, providing a summary of the entry content and are used to index UniProtKB/Swiss-Prot entries based on 10 categories (the category "Technical term" being excluded here). Each keyword is attributed manually to UniProtKB/Swiss-Prot entries and automatically to UniProtKB/TrEMBL entries (according to specific annotation rules).
- CTD Diseases (CD) Ontology CD is MEDIC disease vocabulary that is modified by CTD from the "Diseases" [C] branch of Medical Subject Headings (MeSH), combined with genetic disorders from the Online Mendelian Inheritance in OMIM database.
- CTD Chemicals (CC) Ontology CC is chemical vocabulary that is adapted by CTD from the "Chemicals and Drugs" category and Supplementary Concept Records of Medical Subject Headings (MeSH, a hierarchical vocabulary used to index articles for MEDLINE/PubMed).
Jump to [ Top · Hierarchy · Annotations ]
Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)
Jump to [ Top · Hierarchy ]
Superfamily( show details)
Highlighted in gray are those with FDR_all>0.001
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| Signal peptide-binding domain | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| Lipocalins | 0 | DIRECT |
| LysM domain | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| TATA-box binding protein-like | 0 | DIRECT |
| Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
| Amidase signature (AS) enzymes | 0 | DIRECT |
| BSD domain-like | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| Quinoprotein alcohol dehydrogenase-like | 0 | DIRECT |
| PapD-like | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| tRNA-binding arm | 0 | DIRECT |
| EGF/Laminin | 0 | DIRECT |
| Cryptochrome/photolyase, N-terminal domain | 0 | DIRECT |
| LeuD/IlvD-like | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| Oxygen-evolving enhancer protein 3, | 0 | DIRECT |
| lambda repressor-like DNA-binding domains | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| Putative isomerase YbhE | 0 | DIRECT |
| YrdC/RibB | 0 | DIRECT |
| Release factor | 0 | DIRECT |
| Tautomerase/MIF | 0 | DIRECT |
| Ribosomal protein L1 | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Electron transport accessory proteins | 0 | DIRECT |
| Endosomal sorting complex assembly domain | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| Chelatase | 0 | DIRECT |
| FKBP-like | 0 | DIRECT |
| Sec1/munc18-like (SM) proteins | 0 | DIRECT |
| PLP-binding barrel | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| Pentapeptide repeat-like | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| beta-sandwich domain of Sec23/24 | 0 | DIRECT |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
| Nucleoside diphosphate kinase, NDK | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| EF-G C-terminal domain-like | 0 | DIRECT |
| RL5-like | 0 | DIRECT |
| Folate-binding domain | 0 | DIRECT |
| Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| Metallo-dependent hydrolases | 0 | DIRECT |
| LuxS/MPP-like metallohydrolase | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| Chorismate mutase II | 0 | DIRECT |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| GlnB-like | 0 | DIRECT |
| Peptidyl-tRNA hydrolase II | 0 | DIRECT |
| LigT-like | 0 | DIRECT |
| alpha/beta knot | 0 | DIRECT |
| Serine metabolism enzymes domain | 0 | DIRECT |
| L28p-like | 0 | DIRECT |
| Mss4-like | 0 | DIRECT |
| Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
| Prokaryotic type KH domain (KH-domain type II) | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| Diaminopimelate epimerase-like | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| Preprotein translocase SecY subunit | 0 | DIRECT |
| Rubredoxin-like | 0 | DIRECT |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | DIRECT |
| ssDNA-binding transcriptional regulator domain | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| S15/NS1 RNA-binding domain | 0 | DIRECT |
| Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
| Cytochrome c | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| GINS helical bundle-like | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| Seven-hairpin glycosidases | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| RplX-like | 0 | DIRECT |
| CYTH-like phosphatases | 0 | DIRECT |
| Ribosomal protein S10 | 0 | DIRECT |
| AF1104-like | 0 | DIRECT |
| Formyltransferase | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| MurD-like peptide ligases, catalytic domain | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| MurD-like peptide ligases, peptide-binding domain | 0 | DIRECT |
| Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
| TAZ domain | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| Lipoxigenase | 0 | DIRECT |
| SIS domain | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| Ribosomal proteins L15p and L18e | 0 | DIRECT |
| Tim10-like | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| Amine oxidase catalytic domain | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| PX domain | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| Heme-dependent catalase-like | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Dimeric alpha+beta barrel | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| Mog1p/PsbP-like | 0 | DIRECT |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.0003723 | DIRECT |
| Sm-like ribonucleoproteins | 0.0008611 | DIRECT |
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| Signal peptide-binding domain | 0 | Direct |
| SH3-domain | 0 | Direct |
| RraA-like | 0 | Direct |
| Lipocalins | 0 | Direct |
| LysM domain | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| TATA-box binding protein-like | 0 | Direct |
| Composite domain of metallo-dependent hydrolases | 0 | Direct |
| Amidase signature (AS) enzymes | 0 | Direct |
| BSD domain-like | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| Quinoprotein alcohol dehydrogenase-like | 0 | Direct |
| PapD-like | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| tRNA-binding arm | 0 | Direct |
| EGF/Laminin | 0 | Direct |
| Cryptochrome/photolyase, N-terminal domain | 0 | Direct |
| LeuD/IlvD-like | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| Oxygen-evolving enhancer protein 3, | 0 | Direct |
| lambda repressor-like DNA-binding domains | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| Putative isomerase YbhE | 0 | Direct |
| YrdC/RibB | 0 | Direct |
| Release factor | 0 | Direct |
| Tautomerase/MIF | 0 | Direct |
| Ribosomal protein L1 | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Electron transport accessory proteins | 0 | Direct |
| Endosomal sorting complex assembly domain | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| Chelatase | 0 | Direct |
| FKBP-like | 0 | Direct |
| Sec1/munc18-like (SM) proteins | 0 | Direct |
| PLP-binding barrel | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| Pentapeptide repeat-like | 0 | Direct |
| BolA-like | 0 | Direct |
| beta-sandwich domain of Sec23/24 | 0 | Direct |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
| Nucleoside diphosphate kinase, NDK | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| EF-G C-terminal domain-like | 0 | Direct |
| RL5-like | 0 | Direct |
| Folate-binding domain | 0 | Direct |
| Expressed protein At2g23090/F21P24.15 | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| Metallo-dependent hydrolases | 0 | Direct |
| LuxS/MPP-like metallohydrolase | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| Chorismate mutase II | 0 | Direct |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| GlnB-like | 0 | Direct |
| Peptidyl-tRNA hydrolase II | 0 | Direct |
| LigT-like | 0 | Direct |
| alpha/beta knot | 0 | Direct |
| Serine metabolism enzymes domain | 0 | Direct |
| L28p-like | 0 | Direct |
| Mss4-like | 0 | Direct |
| Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
| Prokaryotic type KH domain (KH-domain type II) | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| Diaminopimelate epimerase-like | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| Preprotein translocase SecY subunit | 0 | Direct |
| Rubredoxin-like | 0 | Direct |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | Direct |
| ssDNA-binding transcriptional regulator domain | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| S15/NS1 RNA-binding domain | 0 | Direct |
| Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
| Cytochrome c | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| GINS helical bundle-like | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| eIF1-like | 0 | Direct |
| Seven-hairpin glycosidases | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| RplX-like | 0 | Direct |
| CYTH-like phosphatases | 0 | Direct |
| Ribosomal protein S10 | 0 | Direct |
| AF1104-like | 0 | Direct |
| Formyltransferase | 0 | Direct |
| R3H domain | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| MurD-like peptide ligases, catalytic domain | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| MurD-like peptide ligases, peptide-binding domain | 0 | Direct |
| Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
| TAZ domain | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| Lipoxigenase | 0 | Direct |
| SIS domain | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| Ribosomal proteins L15p and L18e | 0 | Direct |
| Tim10-like | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| Amine oxidase catalytic domain | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| PX domain | 0 | Direct |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
| RibA-like | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| NHL repeat | 0 | Direct |
| HesB-like domain | 0 | Direct |
| Heme-dependent catalase-like | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Dimeric alpha+beta barrel | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| Mog1p/PsbP-like | 0 | Direct |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.0003723 | Direct |
| Sm-like ribonucleoproteins | 0.0008611 | Direct |
LINKTO: Domain2BO Download and Domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Family( show details)
Highlighted in gray are those with FDR_all>0.001
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| IF2B-like | 0 | DIRECT |
| EF-G/eEF-2 domains III and V | 0 | DIRECT |
| Clathrin coat assembly domain | 0 | DIRECT |
| GAPDH-like | 0 | DIRECT |
| Pseudouridine synthase II TruB | 0 | DIRECT |
| Heme-dependent catalases | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| Plant lipoxigenases | 0 | DIRECT |
| Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain | 0 | DIRECT |
| Lipoxigenase N-terminal domain | 0 | DIRECT |
| DNase I-like | 0 | DIRECT |
| Cryptochrome/photolyase, N-terminal domain | 0 | DIRECT |
| DNA polymerase III clamp loader subunits, C-terminal domain | 0 | DIRECT |
| gamma-carbonic anhydrase-like | 0 | DIRECT |
| Aminomethyltransferase folate-binding domain | 0 | DIRECT |
| Sigma4 domain | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain | 0 | DIRECT |
| LeuD-like | 0 | DIRECT |
| Prolyl oligopeptidase, N-terminal domain | 0 | DIRECT |
| Allosteric chorismate mutase | 0 | DIRECT |
| Tim10/DDP | 0 | DIRECT |
| G domain-linked domain | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| Trunk domain of Sec23/24 | 0 | DIRECT |
| RWD domain | 0 | DIRECT |
| CoA-binding domain | 0 | DIRECT |
| PAPS reductase-like | 0 | DIRECT |
| Formyltransferase | 0 | DIRECT |
| RuBisCo LSMT catalytic domain | 0 | DIRECT |
| Spermidine synthase | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| MPP-like | 0 | DIRECT |
| SpoU-like RNA 2'-O ribose methyltransferase | 0 | DIRECT |
| HIT (HINT, histidine triad) family of protein kinase-interacting proteins | 0 | DIRECT |
| RNA polymerase II subunit RBP4 (RpoF) | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), intermediate domain | 0 | DIRECT |
| MSP-like | 0 | DIRECT |
| UDP-glucose pyrophosphorylase | 0 | DIRECT |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Reductases | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| Serine acetyltransferase | 0 | DIRECT |
| Rps19E-like | 0 | DIRECT |
| beta-Phosphoglucomutase-like | 0 | DIRECT |
| HspBP1 domain | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| ZZ domain | 0 | DIRECT |
| Methionine aminopeptidase, insert domain | 0 | DIRECT |
| Peptidyl-tRNA hydrolase II | 0 | DIRECT |
| Formate/glycerate dehydrogenases, NAD-domain | 0 | DIRECT |
| GABARAP-like | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| Transcriptional coactivator PC4 C-terminal domain | 0 | DIRECT |
| PDI-like | 0 | DIRECT |
| Band 7/SPFH domain | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), catalytic domain | 0 | DIRECT |
| L23p | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| Tryptophan biosynthesis enzymes | 0 | DIRECT |
| Ribosomal proteins L24p and L21e | 0 | DIRECT |
| Starch-binding domain | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| Myf domain | 0 | DIRECT |
| Plant stress-induced protein | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| C5 cytosine-specific DNA methylase, DCM | 0 | DIRECT |
| Ribosomal protein S13 | 0 | DIRECT |
| Hypothetical protein HI1317 | 0 | DIRECT |
| Ubiquitin carboxyl-terminal hydrolase UCH-L | 0 | DIRECT |
| Prokaryotic type KH domain (KH-domain type II) | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| Release factor | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| rRNA adenine dimethylase-like | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| LysM domain | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| Cytidylyltransferase | 0 | DIRECT |
| HEAT repeat | 0 | DIRECT |
| Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| B56-like | 0 | DIRECT |
| Amidase signature (AS) enzymes | 0 | DIRECT |
| Ribosomal S5 protein, N-terminal domain | 0 | DIRECT |
| Ribosomal protein S27e | 0 | DIRECT |
| Ribosomal protein L10e | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| Amine oxidase catalytic domain | 0 | DIRECT |
| Cystatins | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| Ribosomal protein S15 | 0 | DIRECT |
| Diacylglycerol kinase-like | 0 | DIRECT |
| LON domain-like | 0 | DIRECT |
| Rubredoxin | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| ATP sulfurylase N-terminal domain | 0 | DIRECT |
| MIF-related | 0 | DIRECT |
| Ran-binding domain | 0 | DIRECT |
| Class-II DAHP synthetase | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| Eps15 homology domain (EH domain) | 0 | DIRECT |
| SerA intervening domain-like | 0 | DIRECT |
| Ring hydroxylating alpha subunit ISP domain | 0 | DIRECT |
| Ribosomal protein L5 | 0 | DIRECT |
| Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| Clp protease, ClpP subunit | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| UBX domain | 0 | DIRECT |
| Aspartokinase allosteric domain-like | 0 | DIRECT |
| Choline kinase | 0 | DIRECT |
| Sec1/munc18-like (SM) proteins | 0 | DIRECT |
| RNB domain-like | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| 5' nucleotidase-like | 0 | DIRECT |
| 6-phosphogluconate dehydrogenase-like, N-terminal domain | 0 | DIRECT |
| Linker histone H1/H5 | 0 | DIRECT |
| Formate/glycerate dehydrogenases, substrate-binding domain | 0 | DIRECT |
| Acyl-ACP thioesterase-like | 0 | DIRECT |
| HD domain | 0 | DIRECT |
| alpha-Amylases, C-terminal beta-sheet domain | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| Ribosomal protein S10 | 0 | DIRECT |
| Trehalose-6-phosphate synthase, OtsA | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| CAF1-like ribonuclease | 0 | DIRECT |
| Dihydrodipicolinate reductase-like | 0 | DIRECT |
| DJ-1/PfpI | 0 | DIRECT |
| GAT domain | 0 | DIRECT |
| Neurolysin-like | 0 | DIRECT |
| LplA-like | 0 | DIRECT |
| NadC N-terminal domain-like | 0 | DIRECT |
| RNase Z-like | 0 | DIRECT |
| PX domain | 0 | DIRECT |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
| AMPK-beta glycogen binding domain-like | 0 | DIRECT |
| Tail specific protease, catalytic domain | 0 | DIRECT |
| NifU C-terminal domain-like | 0 | DIRECT |
| Glyoxalase I (lactoylglutathione lyase) | 0 | DIRECT |
| Folylpolyglutamate synthetase | 0 | DIRECT |
| Sec63 C-terminal domain-like | 0 | DIRECT |
| RelA/SpoT domain | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| GroES | 0 | DIRECT |
| PsbP-like | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| Deoxycytidylate deaminase-like | 0 | DIRECT |
| Class I alpha-1;2-mannosidase, catalytic domain | 0 | DIRECT |
| PNP-oxidase like | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| Cdc48 N-terminal domain-like | 0 | DIRECT |
| monodomain cytochrome c | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| Ribosomal proteins L15p and L18e | 0 | DIRECT |
| Ribosomal protein L19 | 0 | DIRECT |
| LEA14-like | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), ATPase domain | 0 | DIRECT |
| Cytochrome b5 | 0 | DIRECT |
| AF1104-like | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| N-type ATP pyrophosphatases | 0 | DIRECT |
| IPP isomerase-like | 0 | DIRECT |
| BSD domain | 0 | DIRECT |
| TAZ domain | 0 | DIRECT |
| Signal peptide-binding domain | 0 | DIRECT |
| Ribosomal protein L1 | 0 | DIRECT |
| D-ribulose-5-phosphate 3-epimerase | 0 | DIRECT |
| Plus3 | 0 | DIRECT |
| NadC C-terminal domain-like | 0 | DIRECT |
| Nucleoside diphosphate kinase, NDK | 0 | DIRECT |
| SelR domain | 0 | DIRECT |
| 2Fe-2S ferredoxin-related | 0 | DIRECT |
| Sedlin (SEDL) | 0 | DIRECT |
| Histidine kinase | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Ribosomal protein L3 | 0 | DIRECT |
| VHS domain | 0 | DIRECT |
| Plant transcriptional regulator PBF-2 | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| Poly(ADP-ribose) polymerase, C-terminal domain | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| CAT-like | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| Class I aldolase | 0 | DIRECT |
| Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | DIRECT |
| Calnexin/calreticulin | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | DIRECT |
| MutT-like | 0 | DIRECT |
| WrbA-like | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| BphP N-terminal domain-like | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| Translational machinery components | 0 | DIRECT |
| PhzC/PhzF-like | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| ATP sulfurylase catalytic domain | 0 | DIRECT |
| PUA domain | 0 | DIRECT |
| PCI domain (PINT motif) | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| N-acetyl-l-glutamate kinase | 0 | DIRECT |
| Phytochrome-specific domain | 0 | DIRECT |
| Ribosomal protein L37e | 0 | DIRECT |
| EDF1-like | 0 | DIRECT |
| RplX-like | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | DIRECT |
| Pentapeptide repeats | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| FKBP immunophilin/proline isomerase | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| Ubiquitin activating enzymes (UBA) | 0 | DIRECT |
| beta-sandwich domain of Sec23/24 | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| Oxygen-evolving enhancer protein 3, | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| Preprotein translocase SecY subunit | 0 | DIRECT |
| eIF5a N-terminal domain-like | 0 | DIRECT |
| RNA-polymerase beta | 0 | DIRECT |
| Sec63 N-terminal domain | 0 | DIRECT |
| YicI N-terminal domain-like | 0 | DIRECT |
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| IF2B-like | 0 | Direct |
| EF-G/eEF-2 domains III and V | 0 | Direct |
| Clathrin coat assembly domain | 0 | Direct |
| GAPDH-like | 0 | Direct |
| Pseudouridine synthase II TruB | 0 | Direct |
| Heme-dependent catalases | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| Plant lipoxigenases | 0 | Direct |
| Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain | 0 | Direct |
| Lipoxigenase N-terminal domain | 0 | Direct |
| DNase I-like | 0 | Direct |
| Cryptochrome/photolyase, N-terminal domain | 0 | Direct |
| DNA polymerase III clamp loader subunits, C-terminal domain | 0 | Direct |
| gamma-carbonic anhydrase-like | 0 | Direct |
| Aminomethyltransferase folate-binding domain | 0 | Direct |
| Sigma4 domain | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain | 0 | Direct |
| LeuD-like | 0 | Direct |
| Prolyl oligopeptidase, N-terminal domain | 0 | Direct |
| Allosteric chorismate mutase | 0 | Direct |
| Tim10/DDP | 0 | Direct |
| G domain-linked domain | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| Trunk domain of Sec23/24 | 0 | Direct |
| RWD domain | 0 | Direct |
| CoA-binding domain | 0 | Direct |
| PAPS reductase-like | 0 | Direct |
| Formyltransferase | 0 | Direct |
| RuBisCo LSMT catalytic domain | 0 | Direct |
| Spermidine synthase | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| MPP-like | 0 | Direct |
| SpoU-like RNA 2'-O ribose methyltransferase | 0 | Direct |
| HIT (HINT, histidine triad) family of protein kinase-interacting proteins | 0 | Direct |
| RNA polymerase II subunit RBP4 (RpoF) | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Group II chaperonin (CCT, TRIC), intermediate domain | 0 | Direct |
| MSP-like | 0 | Direct |
| UDP-glucose pyrophosphorylase | 0 | Direct |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Reductases | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| Serine acetyltransferase | 0 | Direct |
| Rps19E-like | 0 | Direct |
| beta-Phosphoglucomutase-like | 0 | Direct |
| HspBP1 domain | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| ZZ domain | 0 | Direct |
| Methionine aminopeptidase, insert domain | 0 | Direct |
| Peptidyl-tRNA hydrolase II | 0 | Direct |
| Formate/glycerate dehydrogenases, NAD-domain | 0 | Direct |
| GABARAP-like | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| Transcriptional coactivator PC4 C-terminal domain | 0 | Direct |
| PDI-like | 0 | Direct |
| Band 7/SPFH domain | 0 | Direct |
| HesB-like domain | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), catalytic domain | 0 | Direct |
| L23p | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| Tryptophan biosynthesis enzymes | 0 | Direct |
| Ribosomal proteins L24p and L21e | 0 | Direct |
| Starch-binding domain | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| Myf domain | 0 | Direct |
| Plant stress-induced protein | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| C5 cytosine-specific DNA methylase, DCM | 0 | Direct |
| Ribosomal protein S13 | 0 | Direct |
| Hypothetical protein HI1317 | 0 | Direct |
| Ubiquitin carboxyl-terminal hydrolase UCH-L | 0 | Direct |
| Prokaryotic type KH domain (KH-domain type II) | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| Release factor | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| rRNA adenine dimethylase-like | 0 | Direct |
| SH3-domain | 0 | Direct |
| LysM domain | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| R3H domain | 0 | Direct |
| Cytidylyltransferase | 0 | Direct |
| HEAT repeat | 0 | Direct |
| Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | Direct |
| RraA-like | 0 | Direct |
| B56-like | 0 | Direct |
| Amidase signature (AS) enzymes | 0 | Direct |
| Ribosomal S5 protein, N-terminal domain | 0 | Direct |
| Ribosomal protein S27e | 0 | Direct |
| Ribosomal protein L10e | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| RibA-like | 0 | Direct |
| Amine oxidase catalytic domain | 0 | Direct |
| Cystatins | 0 | Direct |
| BolA-like | 0 | Direct |
| Ribosomal protein S15 | 0 | Direct |
| Diacylglycerol kinase-like | 0 | Direct |
| LON domain-like | 0 | Direct |
| Rubredoxin | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| ATP sulfurylase N-terminal domain | 0 | Direct |
| MIF-related | 0 | Direct |
| Ran-binding domain | 0 | Direct |
| Class-II DAHP synthetase | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| Eps15 homology domain (EH domain) | 0 | Direct |
| SerA intervening domain-like | 0 | Direct |
| Ring hydroxylating alpha subunit ISP domain | 0 | Direct |
| Ribosomal protein L5 | 0 | Direct |
| Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| Clp protease, ClpP subunit | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| UBX domain | 0 | Direct |
| Aspartokinase allosteric domain-like | 0 | Direct |
| Choline kinase | 0 | Direct |
| Sec1/munc18-like (SM) proteins | 0 | Direct |
| RNB domain-like | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| 5' nucleotidase-like | 0 | Direct |
| 6-phosphogluconate dehydrogenase-like, N-terminal domain | 0 | Direct |
| Linker histone H1/H5 | 0 | Direct |
| Formate/glycerate dehydrogenases, substrate-binding domain | 0 | Direct |
| Acyl-ACP thioesterase-like | 0 | Direct |
| HD domain | 0 | Direct |
| alpha-Amylases, C-terminal beta-sheet domain | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| Ribosomal protein S10 | 0 | Direct |
| Trehalose-6-phosphate synthase, OtsA | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| CAF1-like ribonuclease | 0 | Direct |
| Dihydrodipicolinate reductase-like | 0 | Direct |
| DJ-1/PfpI | 0 | Direct |
| GAT domain | 0 | Direct |
| Neurolysin-like | 0 | Direct |
| LplA-like | 0 | Direct |
| NadC N-terminal domain-like | 0 | Direct |
| RNase Z-like | 0 | Direct |
| PX domain | 0 | Direct |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
| AMPK-beta glycogen binding domain-like | 0 | Direct |
| Tail specific protease, catalytic domain | 0 | Direct |
| NifU C-terminal domain-like | 0 | Direct |
| Glyoxalase I (lactoylglutathione lyase) | 0 | Direct |
| Folylpolyglutamate synthetase | 0 | Direct |
| Sec63 C-terminal domain-like | 0 | Direct |
| RelA/SpoT domain | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| GroES | 0 | Direct |
| PsbP-like | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| Deoxycytidylate deaminase-like | 0 | Direct |
| Class I alpha-1;2-mannosidase, catalytic domain | 0 | Direct |
| PNP-oxidase like | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| Cdc48 N-terminal domain-like | 0 | Direct |
| monodomain cytochrome c | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| Ribosomal proteins L15p and L18e | 0 | Direct |
| Ribosomal protein L19 | 0 | Direct |
| LEA14-like | 0 | Direct |
| Group II chaperonin (CCT, TRIC), ATPase domain | 0 | Direct |
| Cytochrome b5 | 0 | Direct |
| AF1104-like | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| N-type ATP pyrophosphatases | 0 | Direct |
| IPP isomerase-like | 0 | Direct |
| BSD domain | 0 | Direct |
| TAZ domain | 0 | Direct |
| Signal peptide-binding domain | 0 | Direct |
| Ribosomal protein L1 | 0 | Direct |
| D-ribulose-5-phosphate 3-epimerase | 0 | Direct |
| Plus3 | 0 | Direct |
| NadC C-terminal domain-like | 0 | Direct |
| Nucleoside diphosphate kinase, NDK | 0 | Direct |
| SelR domain | 0 | Direct |
| 2Fe-2S ferredoxin-related | 0 | Direct |
| Sedlin (SEDL) | 0 | Direct |
| Histidine kinase | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| Ribosomal protein L3 | 0 | Direct |
| VHS domain | 0 | Direct |
| Plant transcriptional regulator PBF-2 | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| Poly(ADP-ribose) polymerase, C-terminal domain | 0 | Direct |
| NHL repeat | 0 | Direct |
| CAT-like | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| Class I aldolase | 0 | Direct |
| Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | Direct |
| Calnexin/calreticulin | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | Direct |
| MutT-like | 0 | Direct |
| WrbA-like | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| BphP N-terminal domain-like | 0 | Direct |
| eIF1-like | 0 | Direct |
| Translational machinery components | 0 | Direct |
| PhzC/PhzF-like | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| ATP sulfurylase catalytic domain | 0 | Direct |
| PUA domain | 0 | Direct |
| PCI domain (PINT motif) | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| N-acetyl-l-glutamate kinase | 0 | Direct |
| Phytochrome-specific domain | 0 | Direct |
| Ribosomal protein L37e | 0 | Direct |
| EDF1-like | 0 | Direct |
| RplX-like | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | Direct |
| Pentapeptide repeats | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| FKBP immunophilin/proline isomerase | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| Ubiquitin activating enzymes (UBA) | 0 | Direct |
| beta-sandwich domain of Sec23/24 | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| Oxygen-evolving enhancer protein 3, | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| Preprotein translocase SecY subunit | 0 | Direct |
| eIF5a N-terminal domain-like | 0 | Direct |
| RNA-polymerase beta | 0 | Direct |
| Sec63 N-terminal domain | 0 | Direct |
| YicI N-terminal domain-like | 0 | Direct |
LINKTO: Domain2BO Download and Domain2BO Algorithm
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Supra-domain (Single)( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| BSD domain-like | 0 | DIRECT |
| PLP-binding barrel | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| TAZ domain | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| lambda repressor-like DNA-binding domains | 0 | DIRECT |
| Lipocalins | 0 | DIRECT |
| RL5-like | 0 | DIRECT |
| AF1104-like | 0 | DIRECT |
| Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
| MurD-like peptide ligases, peptide-binding domain | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| Release factor | 0 | DIRECT |
| Amine oxidase catalytic domain | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| Seven-hairpin glycosidases | 0 | DIRECT |
| Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
| Folate-binding domain | 0 | DIRECT |
| PX domain | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| Nucleoside diphosphate kinase, NDK | 0 | DIRECT |
| Oxygen-evolving enhancer protein 3, | 0 | DIRECT |
| Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Diaminopimelate epimerase-like | 0 | DIRECT |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| Tim10-like | 0 | DIRECT |
| Mss4-like | 0 | DIRECT |
| Prokaryotic type KH domain (KH-domain type II) | 0 | DIRECT |
| LuxS/MPP-like metallohydrolase | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| tRNA-binding arm | 0 | DIRECT |
| Peptidyl-tRNA hydrolase II | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| Cytochrome c | 0 | DIRECT |
| Endosomal sorting complex assembly domain | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| Rubredoxin-like | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| LysM domain | 0 | DIRECT |
| Sec1/munc18-like (SM) proteins | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| TATA-box binding protein-like | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
| MurD-like peptide ligases, catalytic domain | 0 | DIRECT |
| alpha/beta knot | 0 | DIRECT |
| Preprotein translocase SecY subunit | 0 | DIRECT |
| Ribosomal protein L1 | 0 | DIRECT |
| FKBP-like | 0 | DIRECT |
| SIS domain | 0 | DIRECT |
| Serine metabolism enzymes domain | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| Amidase signature (AS) enzymes | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| Electron transport accessory proteins | 0 | DIRECT |
| GlnB-like | 0 | DIRECT |
| S15/NS1 RNA-binding domain | 0 | DIRECT |
| Chelatase | 0 | DIRECT |
| Lipoxigenase | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| Metallo-dependent hydrolases | 0 | DIRECT |
| LigT-like | 0 | DIRECT |
| Quinoprotein alcohol dehydrogenase-like | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| Formyltransferase | 0 | DIRECT |
| beta-sandwich domain of Sec23/24 | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Ribosomal proteins L15p and L18e | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| Mog1p/PsbP-like | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| Ribosomal protein S10 | 0 | DIRECT |
| Putative isomerase YbhE | 0 | DIRECT |
| Chorismate mutase II | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| LeuD/IlvD-like | 0 | DIRECT |
| EF-G C-terminal domain-like | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| RplX-like | 0 | DIRECT |
| L28p-like | 0 | DIRECT |
| YrdC/RibB | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| CYTH-like phosphatases | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
| Signal peptide-binding domain | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| Heme-dependent catalase-like | 0 | DIRECT |
| PapD-like | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| ssDNA-binding transcriptional regulator domain | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| Dimeric alpha+beta barrel | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
| GINS helical bundle-like | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| EGF/Laminin | 0 | DIRECT |
| Cryptochrome/photolyase, N-terminal domain | 0 | DIRECT |
| Tautomerase/MIF | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| Pentapeptide repeat-like | 0 | DIRECT |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.0003148 | DIRECT |
| Sm-like ribonucleoproteins | 0.0007293 | DIRECT |
| NAD(P)-binding Rossmann-fold domains | 0.0008562 | DIRECT |
| RNA-binding domain, RBD | 0.0009003 | DIRECT |
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| Aconitase iron-sulfur domain | 0 | Direct |
| BSD domain-like | 0 | Direct |
| PLP-binding barrel | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| TAZ domain | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| lambda repressor-like DNA-binding domains | 0 | Direct |
| Lipocalins | 0 | Direct |
| RL5-like | 0 | Direct |
| AF1104-like | 0 | Direct |
| Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
| MurD-like peptide ligases, peptide-binding domain | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| Release factor | 0 | Direct |
| Amine oxidase catalytic domain | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| Seven-hairpin glycosidases | 0 | Direct |
| Expressed protein At2g23090/F21P24.15 | 0 | Direct |
| Folate-binding domain | 0 | Direct |
| PX domain | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| Nucleoside diphosphate kinase, NDK | 0 | Direct |
| Oxygen-evolving enhancer protein 3, | 0 | Direct |
| Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Diaminopimelate epimerase-like | 0 | Direct |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| Tim10-like | 0 | Direct |
| Mss4-like | 0 | Direct |
| Prokaryotic type KH domain (KH-domain type II) | 0 | Direct |
| LuxS/MPP-like metallohydrolase | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| tRNA-binding arm | 0 | Direct |
| Peptidyl-tRNA hydrolase II | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| SH3-domain | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| Cytochrome c | 0 | Direct |
| Endosomal sorting complex assembly domain | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| Rubredoxin-like | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| LysM domain | 0 | Direct |
| Sec1/munc18-like (SM) proteins | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| TATA-box binding protein-like | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
| MurD-like peptide ligases, catalytic domain | 0 | Direct |
| alpha/beta knot | 0 | Direct |
| Preprotein translocase SecY subunit | 0 | Direct |
| Ribosomal protein L1 | 0 | Direct |
| FKBP-like | 0 | Direct |
| SIS domain | 0 | Direct |
| Serine metabolism enzymes domain | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| Amidase signature (AS) enzymes | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
| R3H domain | 0 | Direct |
| Electron transport accessory proteins | 0 | Direct |
| GlnB-like | 0 | Direct |
| S15/NS1 RNA-binding domain | 0 | Direct |
| Chelatase | 0 | Direct |
| Lipoxigenase | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| Metallo-dependent hydrolases | 0 | Direct |
| LigT-like | 0 | Direct |
| Quinoprotein alcohol dehydrogenase-like | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| BolA-like | 0 | Direct |
| Composite domain of metallo-dependent hydrolases | 0 | Direct |
| RibA-like | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| Formyltransferase | 0 | Direct |
| beta-sandwich domain of Sec23/24 | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Ribosomal proteins L15p and L18e | 0 | Direct |
| RraA-like | 0 | Direct |
| Mog1p/PsbP-like | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| Ribosomal protein S10 | 0 | Direct |
| Putative isomerase YbhE | 0 | Direct |
| Chorismate mutase II | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| LeuD/IlvD-like | 0 | Direct |
| EF-G C-terminal domain-like | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| NHL repeat | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| RplX-like | 0 | Direct |
| L28p-like | 0 | Direct |
| YrdC/RibB | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| CYTH-like phosphatases | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
| Signal peptide-binding domain | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| Heme-dependent catalase-like | 0 | Direct |
| PapD-like | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| HesB-like domain | 0 | Direct |
| ssDNA-binding transcriptional regulator domain | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| Dimeric alpha+beta barrel | 0 | Direct |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
| GINS helical bundle-like | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| EGF/Laminin | 0 | Direct |
| Cryptochrome/photolyase, N-terminal domain | 0 | Direct |
| Tautomerase/MIF | 0 | Direct |
| eIF1-like | 0 | Direct |
| Pentapeptide repeat-like | 0 | Direct |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.0003148 | Direct |
| Sm-like ribonucleoproteins | 0.0007293 | Direct |
| NAD(P)-binding Rossmann-fold domains | 0.0008562 | Direct |
| RNA-binding domain, RBD | 0.0009003 | Direct |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Duplex) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
50447,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
50156,52096
50156 - PDZ domain-like
52096 - ClpP/crotonase | 0 | DIRECT |
52172,52172
52172 - CheY-like
52172 - CheY-like | 0 | DIRECT |
55021,56112
55021 - ACT-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
50249,55681
50249 - Nucleic acid-binding proteins
55681 - Class II aaRS and biotin synthetases | 0 | DIRECT |
53850,55021
53850 - Periplasmic binding protein-like II
55021 - ACT-like | 0 | DIRECT |
55781,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
88798,50249
88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE)
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
53738,55957
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
82171,53474
82171 - DPP6 N-terminal domain-like
53474 - alpha/beta-Hydrolases | 0 | DIRECT |
46785,54928
46785 - "Winged helix" DNA-binding domain
54928 - RNA-binding domain, RBD | 0 | DIRECT |
55785,55785
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
54534,48452
54534 - FKBP-like
48452 - TPR-like | 0 | DIRECT |
81995,82919
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24 | 0 | DIRECT |
52402,52833
52402 - Adenine nucleotide alpha hydrolases-like
52833 - Thioredoxin-like | 0 | DIRECT |
48371,50978
48371 - ARM repeat
50978 - WD40 repeat-like | 0 | DIRECT |
54980,54980
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
81383,54518
81383 - F-box domain
54518 - Tubby C-terminal domain-like | 0 | DIRECT |
143548,55021
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | DIRECT |
82919,53300
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | DIRECT |
53732,52016
53732 - Aconitase iron-sulfur domain
52016 - LeuD/IlvD-like | 0 | DIRECT |
55781,55781
55781 - GAF domain-like
55781 - GAF domain-like | 0 | DIRECT |
52317,52317
52317 - Class I glutamine amidotransferase-like
52317 - Class I glutamine amidotransferase-like | 0 | DIRECT |
51338,51556
51338 - Composite domain of metallo-dependent hydrolases
51556 - Metallo-dependent hydrolases | 0 | DIRECT |
82199,81822
82199 - SET domain
81822 - RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
54534,54534
54534 - FKBP-like
54534 - FKBP-like | 0 | DIRECT |
51230,47005
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
55821,142695
55821 - YrdC/RibB
142695 - RibA-like | 0 | DIRECT |
81296,52540
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
55874,52172
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | DIRECT |
81995,81811
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | DIRECT |
52540,90002
52540 - P-loop containing nucleoside triphosphate hydrolases
90002 - Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
53633,55021
53633 - Carbamate kinase-like
55021 - ACT-like | 0 | DIRECT |
88659,88659
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
101908,56219
101908 - Putative isomerase YbhE
56219 - DNase I-like | 0 | DIRECT |
117916,117916
117916 - Fe-S cluster assembly (FSCA) domain-like
117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | DIRECT |
52540,47446
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | DIRECT |
49723,48484
49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)
48484 - Lipoxigenase | 0 | DIRECT |
57850,49599
57850 - RING/U-box
49599 - TRAF domain-like | 0 | DIRECT |
55920,46785
55920 - Creatinase/aminopeptidase
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
47473,52540
47473 - EF-hand
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52283,51735
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains | 0 | DIRECT |
101690,69065
101690 - PAZ domain
69065 - RNase III domain-like | 0 | DIRECT |
54416,54416
54416 - Amine oxidase N-terminal region
54416 - Amine oxidase N-terminal region | 0 | DIRECT |
51735,143548
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | DIRECT |
64356,49447
64356 - SNARE-like
49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
47364,52540
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
101238,46934
101238 - XPC-binding domain
46934 - UBA-like | 0 | DIRECT |
88946,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
50104,50249
50104 - Translation proteins SH3-like domain
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
56524,81296
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0 | DIRECT |
103481,103481
103481 - Multidrug resistance efflux transporter EmrE
103481 - Multidrug resistance efflux transporter EmrE | 0 | DIRECT |
81296,51445
81296 - E set domains
51445 - (Trans)glycosidases | 0 | DIRECT |
52540,52058
52540 - P-loop containing nucleoside triphosphate hydrolases
52058 - L domain-like | 0 | DIRECT |
48452,54277
48452 - TPR-like
54277 - CAD & PB1 domains | 0 | DIRECT |
88697,52374
88697 - PUA domain-like
52374 - Nucleotidylyl transferase | 0 | DIRECT |
52087,101576
52087 - CRAL/TRIO domain
101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
48403,57850
48403 - Ankyrin repeat
57850 - RING/U-box | 0 | DIRECT |
54768,54211
54768 - dsRNA-binding domain-like
54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
57850,57933
57850 - RING/U-box
57933 - TAZ domain | 0 | DIRECT |
47895,52540
47895 - Transducin (alpha subunit), insertion domain
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
46785,158702
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
50022,55961
50022 - ISP domain
55961 - Bet v1-like | 0 | DIRECT |
54747,46906
54747 - Ribosomal L11/L12e N-terminal domain
46906 - Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
56235,52402
56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
52402 - Adenine nucleotide alpha hydrolases-like | 0 | DIRECT |
52425,48173
52425 - Cryptochrome/photolyase, N-terminal domain
48173 - Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
47384,55874
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | DIRECT |
100950,75445
100950 - NagB/RpiA/CoA transferase-like
75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
47005,52777
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | DIRECT |
158702,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52540,48403
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | DIRECT |
81811,82754
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
53756,56784
53756 - UDP-Glycosyltransferase/glycogen phosphorylase
56784 - HAD-like | 0 | DIRECT |
102848,54236
102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
54236 - Ubiquitin-like | 0 | DIRECT |
53300,81995
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
55785,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like | 0 | DIRECT |
54909,54909
54909 - Dimeric alpha+beta barrel
54909 - Dimeric alpha+beta barrel | 0 | DIRECT |
56059,52210
56059 - Glutathione synthetase ATP-binding domain-like
52210 - Succinyl-CoA synthetase domains | 0 | DIRECT |
63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | DIRECT |
48403,52540
48403 - Ankyrin repeat
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
158639,63748
158639 - ENT-like
63748 - Tudor/PWWP/MBT | 0 | DIRECT |
49899,63887
49899 - Concanavalin A-like lectins/glucanases
63887 - P-domain of calnexin/calreticulin | 0 | DIRECT |
54585,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
54637,54637
54637 - Thioesterase/thiol ester dehydrase-isomerase
54637 - Thioesterase/thiol ester dehydrase-isomerase | 0 | DIRECT |
57850,54928
57850 - RING/U-box
54928 - RNA-binding domain, RBD | 0 | DIRECT |
56112,48371
56112 - Protein kinase-like (PK-like)
48371 - ARM repeat | 0 | DIRECT |
58014,51064
58014 - Coiled-coil domain of nucleotide exchange factor GrpE
51064 - Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
158702,81296
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | DIRECT |
53383,53383
53383 - PLP-dependent transferases
53383 - PLP-dependent transferases | 0 | DIRECT |
54416,49998
54416 - Amine oxidase N-terminal region
49998 - Amine oxidase catalytic domain | 0 | DIRECT |
48179,52413
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
109604,81301
109604 - HD-domain/PDEase-like
81301 - Nucleotidyltransferase | 0 | DIRECT |
50249,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
47473,103506
47473 - EF-hand
103506 - Mitochondrial carrier | 0 | DIRECT |
51735,48179
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.0004497 | DIRECT |
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
50447,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | Direct |
50156,52096
50156 - PDZ domain-like
52096 - ClpP/crotonase | 0 | Direct |
52172,52172
52172 - CheY-like
52172 - CheY-like | 0 | Direct |
55021,56112
55021 - ACT-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
50249,55681
50249 - Nucleic acid-binding proteins
55681 - Class II aaRS and biotin synthetases | 0 | Direct |
53850,55021
53850 - Periplasmic binding protein-like II
55021 - ACT-like | 0 | Direct |
55781,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
88798,50249
88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE)
50249 - Nucleic acid-binding proteins | 0 | Direct |
53738,55957
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
82171,53474
82171 - DPP6 N-terminal domain-like
53474 - alpha/beta-Hydrolases | 0 | Direct |
46785,54928
46785 - "Winged helix" DNA-binding domain
54928 - RNA-binding domain, RBD | 0 | Direct |
55785,55785
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
54534,48452
54534 - FKBP-like
48452 - TPR-like | 0 | Direct |
81995,82919
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24 | 0 | Direct |
52402,52833
52402 - Adenine nucleotide alpha hydrolases-like
52833 - Thioredoxin-like | 0 | Direct |
48371,50978
48371 - ARM repeat
50978 - WD40 repeat-like | 0 | Direct |
54980,54980
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | Direct |
81383,54518
81383 - F-box domain
54518 - Tubby C-terminal domain-like | 0 | Direct |
143548,55021
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | Direct |
82919,53300
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | Direct |
53732,52016
53732 - Aconitase iron-sulfur domain
52016 - LeuD/IlvD-like | 0 | Direct |
55781,55781
55781 - GAF domain-like
55781 - GAF domain-like | 0 | Direct |
52317,52317
52317 - Class I glutamine amidotransferase-like
52317 - Class I glutamine amidotransferase-like | 0 | Direct |
51338,51556
51338 - Composite domain of metallo-dependent hydrolases
51556 - Metallo-dependent hydrolases | 0 | Direct |
82199,81822
82199 - SET domain
81822 - RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
54534,54534
54534 - FKBP-like
54534 - FKBP-like | 0 | Direct |
51230,47005
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
55821,142695
55821 - YrdC/RibB
142695 - RibA-like | 0 | Direct |
81296,52540
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
55874,52172
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | Direct |
81995,81811
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | Direct |
52540,90002
52540 - P-loop containing nucleoside triphosphate hydrolases
90002 - Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
53633,55021
53633 - Carbamate kinase-like
55021 - ACT-like | 0 | Direct |
88659,88659
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
101908,56219
101908 - Putative isomerase YbhE
56219 - DNase I-like | 0 | Direct |
117916,117916
117916 - Fe-S cluster assembly (FSCA) domain-like
117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | Direct |
52540,47446
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | Direct |
49723,48484
49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)
48484 - Lipoxigenase | 0 | Direct |
57850,49599
57850 - RING/U-box
49599 - TRAF domain-like | 0 | Direct |
55920,46785
55920 - Creatinase/aminopeptidase
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
47473,52540
47473 - EF-hand
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52283,51735
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains | 0 | Direct |
101690,69065
101690 - PAZ domain
69065 - RNase III domain-like | 0 | Direct |
54416,54416
54416 - Amine oxidase N-terminal region
54416 - Amine oxidase N-terminal region | 0 | Direct |
51735,143548
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | Direct |
64356,49447
64356 - SNARE-like
49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
47364,52540
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
101238,46934
101238 - XPC-binding domain
46934 - UBA-like | 0 | Direct |
88946,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
50104,50249
50104 - Translation proteins SH3-like domain
50249 - Nucleic acid-binding proteins | 0 | Direct |
56524,81296
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0 | Direct |
103481,103481
103481 - Multidrug resistance efflux transporter EmrE
103481 - Multidrug resistance efflux transporter EmrE | 0 | Direct |
81296,51445
81296 - E set domains
51445 - (Trans)glycosidases | 0 | Direct |
52540,52058
52540 - P-loop containing nucleoside triphosphate hydrolases
52058 - L domain-like | 0 | Direct |
48452,54277
48452 - TPR-like
54277 - CAD & PB1 domains | 0 | Direct |
88697,52374
88697 - PUA domain-like
52374 - Nucleotidylyl transferase | 0 | Direct |
52087,101576
52087 - CRAL/TRIO domain
101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
48403,57850
48403 - Ankyrin repeat
57850 - RING/U-box | 0 | Direct |
54768,54211
54768 - dsRNA-binding domain-like
54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
57850,57933
57850 - RING/U-box
57933 - TAZ domain | 0 | Direct |
47895,52540
47895 - Transducin (alpha subunit), insertion domain
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
46785,158702
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | Direct |
50022,55961
50022 - ISP domain
55961 - Bet v1-like | 0 | Direct |
54747,46906
54747 - Ribosomal L11/L12e N-terminal domain
46906 - Ribosomal protein L11, C-terminal domain | 0 | Direct |
56235,52402
56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
52402 - Adenine nucleotide alpha hydrolases-like | 0 | Direct |
52425,48173
52425 - Cryptochrome/photolyase, N-terminal domain
48173 - Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
47384,55874
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | Direct |
100950,75445
100950 - NagB/RpiA/CoA transferase-like
75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
47005,52777
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | Direct |
158702,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52540,48403
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | Direct |
81811,82754
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
53756,56784
53756 - UDP-Glycosyltransferase/glycogen phosphorylase
56784 - HAD-like | 0 | Direct |
102848,54236
102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
54236 - Ubiquitin-like | 0 | Direct |
53300,81995
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | Direct |
55785,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like | 0 | Direct |
54909,54909
54909 - Dimeric alpha+beta barrel
54909 - Dimeric alpha+beta barrel | 0 | Direct |
56059,52210
56059 - Glutathione synthetase ATP-binding domain-like
52210 - Succinyl-CoA synthetase domains | 0 | Direct |
63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | Direct |
48403,52540
48403 - Ankyrin repeat
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
158639,63748
158639 - ENT-like
63748 - Tudor/PWWP/MBT | 0 | Direct |
49899,63887
49899 - Concanavalin A-like lectins/glucanases
63887 - P-domain of calnexin/calreticulin | 0 | Direct |
54585,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
54637,54637
54637 - Thioesterase/thiol ester dehydrase-isomerase
54637 - Thioesterase/thiol ester dehydrase-isomerase | 0 | Direct |
57850,54928
57850 - RING/U-box
54928 - RNA-binding domain, RBD | 0 | Direct |
56112,48371
56112 - Protein kinase-like (PK-like)
48371 - ARM repeat | 0 | Direct |
58014,51064
58014 - Coiled-coil domain of nucleotide exchange factor GrpE
51064 - Head domain of nucleotide exchange factor GrpE | 0 | Direct |
158702,81296
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | Direct |
53383,53383
53383 - PLP-dependent transferases
53383 - PLP-dependent transferases | 0 | Direct |
54416,49998
54416 - Amine oxidase N-terminal region
49998 - Amine oxidase catalytic domain | 0 | Direct |
48179,52413
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
109604,81301
109604 - HD-domain/PDEase-like
81301 - Nucleotidyltransferase | 0 | Direct |
50249,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
47473,103506
47473 - EF-hand
103506 - Mitochondrial carrier | 0 | Direct |
51735,48179
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.0004497 | Direct |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Triple) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52540,52540,46785
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
46785,158702,81296
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | DIRECT |
52283,51735,143548
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | DIRECT |
158702,52540,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
57850,57850,57933
57850 - RING/U-box
57850 - RING/U-box
57933 - TAZ domain | 0 | DIRECT |
54585,52540,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52540,46785,158702
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
53300,81995,81811
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | DIRECT |
63411,63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | DIRECT |
54416,54416,49998
54416 - Amine oxidase N-terminal region
54416 - Amine oxidase N-terminal region
49998 - Amine oxidase catalytic domain | 0 | DIRECT |
54534,54534,54534
54534 - FKBP-like
54534 - FKBP-like
54534 - FKBP-like | 0 | DIRECT |
55973,55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
50249,57756,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
55781,55785,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
51735,143548,55021
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | DIRECT |
47364,52540,47446
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | DIRECT |
55785,55781,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
55781 - GAF domain-like | 0 | DIRECT |
50447,54980,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
90209,90209,90209
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like | 0 | DIRECT |
51735,48179,52413
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
81995,81811,82754
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
55781,47384,55874
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | DIRECT |
53738,53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
46938,52087,101576
46938 - CRAL/TRIO N-terminal domain
52087 - CRAL/TRIO domain
101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
51230,47005,52777
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | DIRECT |
52540,50447,54980
52540 - P-loop containing nucleoside triphosphate hydrolases
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
53738,53738,55957
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
81995,82919,53300
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | DIRECT |
52047,52058,56112
52047 - RNI-like
52058 - L domain-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
47384,55874,52172
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | DIRECT |
53633,55021,55021
53633 - Carbamate kinase-like
55021 - ACT-like
55021 - ACT-like | 0 | DIRECT |
82919,53300,81995
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
88946,88659,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
50692,54585,52540
50692 - ADC-like
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
81296,52540,48403
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | DIRECT |
55781,55781,55785
55781 - GAF domain-like
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
54534,54534,48452
54534 - FKBP-like
54534 - FKBP-like
48452 - TPR-like | 0 | DIRECT |
52833,52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | DIRECT |
81296,51445,51011
81296 - E set domains
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | DIRECT |
46785,158702,52540
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52540,52540,46785
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
46785,158702,81296
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | Direct |
52283,51735,143548
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | Direct |
158702,52540,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
57850,57850,57933
57850 - RING/U-box
57850 - RING/U-box
57933 - TAZ domain | 0 | Direct |
54585,52540,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52540,46785,158702
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | Direct |
53300,81995,81811
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | Direct |
63411,63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | Direct |
54416,54416,49998
54416 - Amine oxidase N-terminal region
54416 - Amine oxidase N-terminal region
49998 - Amine oxidase catalytic domain | 0 | Direct |
54534,54534,54534
54534 - FKBP-like
54534 - FKBP-like
54534 - FKBP-like | 0 | Direct |
55973,55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | Direct |
50249,57756,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
55781,55785,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
51735,143548,55021
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | Direct |
47364,52540,47446
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | Direct |
55785,55781,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
55781 - GAF domain-like | 0 | Direct |
50447,54980,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | Direct |
90209,90209,90209
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like | 0 | Direct |
51735,48179,52413
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
81995,81811,82754
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
55781,47384,55874
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | Direct |
53738,53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
46938,52087,101576
46938 - CRAL/TRIO N-terminal domain
52087 - CRAL/TRIO domain
101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
51230,47005,52777
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | Direct |
52540,50447,54980
52540 - P-loop containing nucleoside triphosphate hydrolases
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | Direct |
53738,53738,55957
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
81995,82919,53300
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | Direct |
52047,52058,56112
52047 - RNI-like
52058 - L domain-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
47384,55874,52172
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | Direct |
53633,55021,55021
53633 - Carbamate kinase-like
55021 - ACT-like
55021 - ACT-like | 0 | Direct |
82919,53300,81995
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
88946,88659,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
50692,54585,52540
50692 - ADC-like
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
81296,52540,48403
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | Direct |
55781,55781,55785
55781 - GAF domain-like
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
54534,54534,48452
54534 - FKBP-like
54534 - FKBP-like
48452 - TPR-like | 0 | Direct |
52833,52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | Direct |
81296,51445,51011
81296 - E set domains
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | Direct |
46785,158702,52540
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Plot distribution on species Tree Of Life (sTOL) for Superfamily and/or Family domains annotated by this AP term
 |
Plot tree as:
| |
Download Newick format tree:
|
( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domain
architecture data for all genomes in SUPERFAMILY. The PAUP
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
Plot distribution on species Tree Of Life (sTOL) for single supra-domains annotated by this AP term
|
Plot tree as:
| |
Download Newick format tree:
| |
Browsing in TREE OF LIFE:
|
( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
|
|
> BO Hierarchy > LP.02 two leaves visible stage
