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Home > SCOP hierarchy > Reverse transcriptase family

Reverse transcriptase family

SCOP classification

Root:	SCOP hierarchy in SUPERFAMILY [ 0] (11)
Class:	Multi-domain proteins (alpha and beta) [ 56572] (66)
Fold:	DNA/RNA polymerases [ 56671]
Superfamily:	DNA/RNA polymerases [ 56672] (6)
Family:	Reverse transcriptase [ 56686] (2)

Family statistics

	Genomes (130)	Uniprot 2018_03 genome	PDB chains (SCOP 1.75)
Domains	3,676	303,920	82
Proteins	3,662	303,857	82

Enzyme Commission (EC)

(show details)

	EC term	FDR (all)	SDEO level	Annotation (direct or inherited)
Enzyme Commission (EC)	Nucleotidyltransferases	0	Least Informative	Direct
Enzyme Commission (EC)	Acting on ester bonds	0	Least Informative	Direct
Enzyme Commission (EC)	Acting on peptide bonds (peptide hydrolases)	0.000000000000003089	Least Informative	Direct
Enzyme Commission (EC)	Acting on acid anhydrides	1	Least Informative	Inherited
Enzyme Commission (EC)	In phosphorous-containing anhydrides	0.0002888	Moderately Informative	Direct
Enzyme Commission (EC)	Endoribonucleases producing 5'-phosphomonoesters	0	Informative	Direct
Enzyme Commission (EC)	Exoribonucleases producing 5'-phosphomonoesters	0	Informative	Direct
Enzyme Commission (EC)	DNA-directed DNA polymerase	0	Informative	Direct
Enzyme Commission (EC)	Aspartic endopeptidases	0	Informative	Direct
Enzyme Commission (EC)	RNA-directed DNA polymerase	0	Informative	Direct
Enzyme Commission (EC)	dUTP diphosphatase	0.0000000004795	Highly Informative	Direct

Document: EC annotation of SCOP domains

Enzyme Commission (EC)

(show details)

	EC term	FDR (all)	SDEC level	Annotation (direct or inherited)
Enzyme Commission (EC)	Hydrolases	0	Least Informative	Direct
Enzyme Commission (EC)	Transferases	0	Least Informative	Direct
Enzyme Commission (EC)	Nucleotidyltransferases	0	Moderately Informative	Direct
Enzyme Commission (EC)	Acting on ester bonds	0	Moderately Informative	Direct
Enzyme Commission (EC)	Acting on peptide bonds (peptidases)	0.000000000000243	Moderately Informative	Direct
Enzyme Commission (EC)	Acting on acid anhydrides	1	Moderately Informative	Inherited
Enzyme Commission (EC)	DNA-directed DNA polymerase	0	Informative	Direct
Enzyme Commission (EC)	In phosphorus-containing anhydrides	0.000000004299	Informative	Direct
Enzyme Commission (EC)	Exoribonucleases producing 5'-phosphomonoesters	0	Highly Informative	Direct
Enzyme Commission (EC)	Retroviral ribonuclease H	0	Highly Informative	Direct
Enzyme Commission (EC)	RNA-directed DNA polymerase	0	Highly Informative	Direct
Enzyme Commission (EC)	Aspartic endopeptidases	0	Highly Informative	Direct
Enzyme Commission (EC)	dUTP diphosphatase	0	Highly Informative	Direct

Document: EC annotation of SCOP domains

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Internal database links


Superfamily level	Family level

Browse genome assignments for this superfamily. The SUPERFAMILY hidden Markov model library has been used to carry out SCOP domain assignments to all genomes at the superfamily level.


Superfamily level	Family level

Alignments of sequences to 49 models in this superfamily are available by clicking on the 'Alignments' icon above. PDB sequences less than 40% identical are shown by default, but any other sequence(s) may be aligned. Select PDB sequences, genome sequences, or paste in or upload your own sequences.

Superfamily level

Browse and view proteins in genomes which have different domain combinations including a DNA/RNA polymerases domain.


Superfamily level	Family level

Examine the distribution of domain superfamilies, or families, across the major taxonomic kingdoms or genomes within a kingdom. This gives an immediate impression of how superfamilies, or families, are restricted to certain kingdoms of life.

Jump to [ Top of page · SCOP classification · Enzyme Commission (EC) · Enzyme Commission (EC) · Internal database links ]