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Plant structure DEvelopment stage (PDE): leaf production stage 

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Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)

Shortest distance to current term
(+ for parents, - for children)		 AP term [AP ID] <#Children> #Domains
(Superfamily|Family)		 #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   plant structure development stage [PO:0009012] <7>
+ + + + 4:   whole plant development stage [PO:0007033] <3>(321|479) (321|217|77)
+ + + + 4:   life of whole plant stage [PO:0025337] <2>(317|475) (317|215|77)
+ + + 3:   sporophyte development stage [PO:0028002] <5>(317|475) (317|215|77)
+ + 2:   sporophyte vegetative stage [PO:0007134] <6>(316|474) (316|215|77)
+ 1:   1 main shoot growth stage [PO:0007112] <3>(204|324) (204|143|54)
0:   leaf production stage [PO:0007133] <20>(204|322) (204|143|54)
- 1:   LP.01 one leaf visible stage [PO:0007094](0|0) (0|0|0)
- 1:   LP.02 two leaves visible stage [PO:0007098](139|237) (141|97|40)
- 1:   LP.03 three leaves visible stage [PO:0007106](0|0) (0|0|0)
- 1:   LP.04 four leaves visible stage [PO:0007115](186|307) (186|133|51)
- 1:   LP.05 five leaves visible stage [PO:0007065](0|0) (0|0|0)
- 1:   LP.06 six leaves visible stage [PO:0007123](151|256) (151|106|45)
- 1:   LP.07 seven leaves visible stage [PO:0007063](0|0) (0|0|0)
- 1:   LP.08 eight leaves visible stage [PO:0007095](131|229) (131|94|38)
- 1:   LP.09 nine leaves visible stage [PO:0007101](0|0) (0|0|0)
- 1:   LP.10 ten leaves visible stage [PO:0007103](155|258) (155|109|44)
- 1:   LP.11 eleven leaves visible stage [PO:0007116](0|0) (0|0|0)
- 1:   LP.12 twelve leaves visible stage [PO:0007064](137|227) (137|91|37)
- 1:   LP.13 thirteen leaves visible stage [PO:0007083](0|0) (0|0|0)
- 1:   LP.14 fourteen leaves visible stage [PO:0007085](0|0) (0|0|0)
- 1:   LP.15 fifteen leaves visible stage [PO:0007104](0|0) (0|0|0)
- 1:   LP.16 sixteen leaves visible stage [PO:0007119](0|0) (0|0|0)
- 1:   LP.17 seventeen leaves visible stage [PO:0007067](0|0) (0|0|0)
- 1:   LP.18 eighteen leaves visible stage [PO:0007072](0|0) (0|0|0)
- 1:   LP.19 nineteen leaves visible stage [PO:0007120](0|0) (0|0|0)
- 1:   LP.20 twenty or more leaves whorls visible stage [PO:0007082](0|0) (0|0|0)

Superfamily

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Superfamily

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SCOP term FDR (all) Annotation (direct or inherited)
Signal peptide-binding domain0Direct
E2F-DP heterodimerization region0Direct
Cysteine alpha-hairpin motif0Direct
CO dehydrogenase molybdoprotein N-domain-like0Direct
SH3-domain0Direct
RraA-like0Direct
DNA repair protein MutS, domain I0Direct
Lipocalins0Direct
LysM domain0Direct
Head domain of nucleotide exchange factor GrpE0Direct
TATA-box binding protein-like0Direct
Composite domain of metallo-dependent hydrolases0Direct
Amidase signature (AS) enzymes0Direct
BSD domain-like0Direct
Rudiment single hybrid motif0Direct
Ribosomal L11/L12e N-terminal domain0Direct
C-terminal, gelsolin-like domain of Sec23/240Direct
Quinoprotein alcohol dehydrogenase-like0Direct
NagB/RpiA/CoA transferase-like0Direct
PapD-like0Direct
Ribosomal protein L30p/L7e0Direct
tRNA-binding arm0Direct
EGF/Laminin0Direct
Cryptochrome/photolyase, N-terminal domain0Direct
LeuD/IlvD-like0Direct
Ribosomal protein L31e0Direct
Phosphoglycerate kinase0Direct
Oxygen-evolving enhancer protein 3,0Direct
lambda repressor-like DNA-binding domains0Direct
Domain of the SRP/SRP receptor G-proteins0Direct
Creatinase/aminopeptidase0Direct
Crambin-like0Direct
Homocysteine S-methyltransferase0Direct
N-terminal, heterodimerisation domain of RBP7 (RpoE)0Direct
Putative isomerase YbhE0Direct
YrdC/RibB0Direct
Release factor0Direct
Tautomerase/MIF0Direct
PreATP-grasp domain0Direct
Ribosomal protein L10Direct
CHY zinc finger-like0Direct
Transducin (alpha subunit), insertion domain0Direct
Tetrapyrrole methylase0Direct
Ribosomal protein L40Direct
Electron transport accessory proteins0Direct
Endosomal sorting complex assembly domain0Direct
P-domain of calnexin/calreticulin0Direct
Single hybrid motif0Direct
Chelatase0Direct
FKBP-like0Direct
Sec1/munc18-like (SM) proteins0Direct
PLP-binding barrel0Direct
Mitochondrial glycoprotein MAM33-like0Direct
Clc chloride channel0Direct
Preprotein translocase SecE subunit0Direct
Sigma3 and sigma4 domains of RNA polymerase sigma factors0Direct
Cyclophilin-like0Direct
Gamma-glutamyl cyclotransferase-like0Direct
Prokaryotic type I DNA topoisomerase0Direct
Zn-finger domain of Sec23/240Direct
DNA ligase/mRNA capping enzyme, catalytic domain0Direct
Pentapeptide repeat-like0Direct
BolA-like0Direct
beta-sandwich domain of Sec23/240Direct
RuBisCo LSMT C-terminal, substrate-binding domain0Direct
Nucleoside diphosphate kinase, NDK0Direct
Ribosomal protein L19 (L19e)0Direct
EF-G C-terminal domain-like0Direct
RL5-like0Direct
Saposin0Direct
Folate-binding domain0Direct
Peptidyl-tRNA hydrolase-like0Direct
Isochorismatase-like hydrolases0Direct
NAD(P)-linked oxidoreductase0Direct
Expressed protein At2g23090/F21P24.150Direct
Glycolipid transfer protein, GLTP0Direct
Ribosomal protein L39e0Direct
Ribonuclease PH domain 2-like0Direct
Enolase C-terminal domain-like0Direct
Hypothetical protein YjiA, C-terminal domain0Direct
Plus3-like0Direct
Metallo-dependent hydrolases0Direct
LuxS/MPP-like metallohydrolase0Direct
Bacterial exopeptidase dimerisation domain0Direct
Cu,Zn superoxide dismutase-like0Direct
AMPKBI-like0Direct
Inosine monophosphate dehydrogenase (IMPDH)0Direct
Ribosomal protein L130Direct
Phosphoglucomutase, C-terminal domain0Direct
LDH C-terminal domain-like0Direct
Radical SAM enzymes0Direct
Chorismate mutase II0Direct
Activating enzymes of the ubiquitin-like proteins0Direct
N-terminal domain of the delta subunit of the F1F0-ATP synthase0Direct
Ligand-binding domain in the NO signalling and Golgi transport0Direct
Ribosomal protein L25-like0Direct
Phosphoglucomutase, first 3 domains0Direct
RNase III domain-like0Direct
GlnB-like0Direct
Peptidyl-tRNA hydrolase II0Direct
LigT-like0Direct
alpha/beta knot0Direct
Serine metabolism enzymes domain0Direct
L28p-like0Direct
Mss4-like0Direct
FAH0Direct
Sigma2 domain of RNA polymerase sigma factors0Direct
Zinc hairpin stack0Direct
Prokaryotic type KH domain (KH-domain type II)0Direct
Heme oxygenase-like0Direct
Ribosomal protein L10-like0Direct
CO dehydrogenase ISP C-domain like0Direct
Diaminopimelate epimerase-like0Direct
S13-like H2TH domain0Direct
Ribosomal protein S20Direct
Preprotein translocase SecY subunit0Direct
beta-carbonic anhydrase, cab0Direct
Rubredoxin-like0Direct
DNA repair protein MutS, domain II0Direct
Tetrahydrobiopterin biosynthesis enzymes-like0Direct
Ribosomal protein L16p/L10e0Direct
ssDNA-binding transcriptional regulator domain0Direct
Carbon-nitrogen hydrolase0Direct
GroEL-intermediate domain like0Direct
CO dehydrogenase flavoprotein C-terminal domain-like0Direct
GroEL equatorial domain-like0Direct
GroEL apical domain-like0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
S15/NS1 RNA-binding domain0Direct
Flavoproteins0Direct
Supernatant protein factor (SPF), C-terminal domain0Direct
Cytochrome c0Direct
FAD-dependent thiol oxidase0Direct
Nicotinate/Quinolinate PRTase C-terminal domain-like0Direct
Probable bacterial effector-binding domain0Direct
Casein kinase II beta subunit0Direct
GINS helical bundle-like0Direct
Aconitase iron-sulfur domain0Direct
Enolase N-terminal domain-like0Direct
eIF1-like0Direct
Seven-hairpin glycosidases0Direct
Succinyl-CoA synthetase domains0Direct
RplX-like0Direct
ATP-dependent DNA ligase DNA-binding domain0Direct
CYTH-like phosphatases0Direct
Ribosomal protein S100Direct
AF1104-like0Direct
Formyltransferase0Direct
R3H domain0Direct
Molybdenum cofactor-binding domain0Direct
Poly A polymerase C-terminal region-like0Direct
Peptide methionine sulfoxide reductase0Direct
Oxidoreductase molybdopterin-binding domain0Direct
Prokaryotic ribosomal protein L170Direct
MurD-like peptide ligases, catalytic domain0Direct
Creatinase/prolidase N-terminal domain0Direct
Ribosomal protein S60Direct
Prefoldin0Direct
PAH2 domain0Direct
D-ribose-5-phosphate isomerase (RpiA), lid domain0Direct
Magnesium transport protein CorA, transmembrane region0Direct
Rhodanese/Cell cycle control phosphatase0Direct
Nitrite and sulphite reductase 4Fe-4S domain-like0Direct
MurD-like peptide ligases, peptide-binding domain0Direct
Ribulose-phoshate binding barrel0Direct
Ribosomal proteins S24e, L23 and L15e0Direct
TAZ domain0Direct
Ribosomal protein L29 (L29p)0Direct
ATP synthase (F1-ATPase), gamma subunit0Direct
Lipoxigenase0Direct
SIS domain0Direct
Ribosomal protein L140Direct
NSFL1 (p97 ATPase) cofactor p47, SEP domain0Direct
Cryptochrome/photolyase FAD-binding domain0Direct
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain0Direct
Alpha subunit of glutamate synthase, C-terminal domain0Direct
S-adenosylmethionine synthetase0Direct
Ribosomal proteins L15p and L18e0Direct
FAD/NAD-linked reductases, dimerisation (C-terminal) domain0Direct
Tim10-like0Direct
Acyl-CoA binding protein0Direct
Amine oxidase catalytic domain0Direct
Helical domain of Sec23/240Direct
PX domain0Direct
Nicotinate/Quinolinate PRTase N-terminal domain-like0Direct
Aldolase0Direct
RibA-like0Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0Direct
NHL repeat0Direct
HesB-like domain0Direct
Heme-dependent catalase-like0Direct
Coiled-coil domain of nucleotide exchange factor GrpE0Direct
Dimeric alpha+beta barrel0Direct
Formate/glycerate dehydrogenase catalytic domain-like0Direct
XPC-binding domain0Direct
Globin-like0Direct
Mog1p/PsbP-like0Direct
RNA-binding domain, RBD0.00005034Direct
Thioredoxin-like0.0002952Direct
ACT-like0.003347Inherited
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain0.005291Inherited
6-phosphogluconate dehydrogenase C-terminal domain-like0.00835Inherited
NAD(P)-binding Rossmann-fold domains0.01158Inherited
Sm-like ribonucleoproteins0.02263Inherited

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Family

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Family

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SCOP term FDR (all) Annotation (direct or inherited)
GroEL-like chaperone, apical domain1Inherited
DNA repair glycosylase, 2 C-terminal domains1Inherited
N-terminal, heterodimerisation domain of RBP7 (RpoE)1Inherited
Phosphoglucomutase, C-terminal domain1Inherited
IF2B-like1Inherited
EF-G/eEF-2 domains III and V1Inherited
Clathrin coat assembly domain1Inherited
Cyclophilin (peptidylprolyl isomerase)1Inherited
GAPDH-like1Inherited
Pseudouridine synthase II TruB1Inherited
Heme-dependent catalases1Inherited
AMPKBI-like1Inherited
Plant lipoxigenases1Inherited
Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain1Inherited
Lipoxigenase N-terminal domain1Inherited
DNase I-like1Inherited
Aminoacid dehydrogenases1Inherited
NADPH-cytochrome p450 reductase-like1Inherited
Cryptochrome/photolyase, N-terminal domain1Inherited
DNA polymerase III clamp loader subunits, C-terminal domain1Inherited
gamma-carbonic anhydrase-like1Inherited
Aminomethyltransferase folate-binding domain1Inherited
Sigma4 domain1Inherited
CO dehydrogenase flavoprotein N-terminal domain-like1Inherited
PAH2 domain1Inherited
Domain of the SRP/SRP receptor G-proteins1Inherited
NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain1Inherited
LeuD-like1Inherited
Prolyl oligopeptidase, N-terminal domain1Inherited
Allosteric chorismate mutase1Inherited
Tim10/DDP1Inherited
G domain-linked domain1Inherited
Crambin-like1Inherited
ATP synthase (F1-ATPase), gamma subunit1Inherited
NagB-like1Inherited
NSFL1 (p97 ATPase) cofactor p47, SEP domain1Inherited
Poly A polymerase C-terminal region-like1Inherited
Trunk domain of Sec23/241Inherited
RWD domain1Inherited
CoA-binding domain1Inherited
PAPS reductase-like1Inherited
Formyltransferase1Inherited
(Glycosyl)asparaginase1Inherited
RuBisCo LSMT catalytic domain1Inherited
Spermidine synthase1Inherited
Ribosomal protein L29 (L29p)1Inherited
HMGL-like1Inherited
MPP-like1Inherited
SpoU-like RNA 2'-O ribose methyltransferase1Inherited
HIT (HINT, histidine triad) family of protein kinase-interacting proteins1Inherited
Molybdenum cofactor-binding domain1Inherited
RNA polymerase II subunit RBP4 (RpoF)1Inherited
Ribosomal protein L41Inherited
Homoserine dehydrogenase-like1Inherited
Group II chaperonin (CCT, TRIC), intermediate domain1Inherited
MSP-like1Inherited
HAT/Suf repeat1Inherited
UDP-glucose pyrophosphorylase1Inherited
3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB1Inherited
Coiled-coil domain of nucleotide exchange factor GrpE1Inherited
Reductases1Inherited
E2F dimerization segment1Inherited
CHY zinc finger1Inherited
Group II chaperonin (CCT, TRIC), apical domain1Inherited
FAD-dependent thiol oxidase1Inherited
Serine acetyltransferase1Inherited
Rps19E-like1Inherited
beta-Phosphoglucomutase-like1Inherited
HspBP1 domain1Inherited
S-adenosylmethionine synthetase1Inherited
ZZ domain1Inherited
Methionine aminopeptidase, insert domain1Inherited
Peptidyl-tRNA hydrolase II1Inherited
Nitrogenase iron protein-like1Inherited
Formate/glycerate dehydrogenases, NAD-domain1Inherited
GABARAP-like1Inherited
Poly A polymerase head domain-like1Inherited
Nitrite and sulphite reductase 4Fe-4S domain-like1Inherited
Transcriptional coactivator PC4 C-terminal domain1Inherited
Mitochondrial glycoprotein MAM33-like1Inherited
Single-domain sulfurtransferase1Inherited
PDI-like1Inherited
Band 7/SPFH domain1Inherited
HesB-like domain1Inherited
D-ribose-5-phosphate isomerase (RpiA), catalytic domain1Inherited
Branched-chain alpha-keto acid dehydrogenase Pyr module1Inherited
L23p1Inherited
Zinc hairpin stack1Inherited
C-terminal, gelsolin-like domain of Sec23/241Inherited
Tryptophan biosynthesis enzymes1Inherited
Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain1Inherited
Ribosomal proteins L24p and L21e1Inherited
Starch-binding domain1Inherited
Aconitase iron-sulfur domain1Inherited
Myf domain1Inherited
FAH1Inherited
Plant stress-induced protein1Inherited
Ribosomal protein S61Inherited
C5 cytosine-specific DNA methylase, DCM1Inherited
Ribosomal protein S131Inherited
Ribosomal protein L18 and S111Inherited
Hypothetical protein HI13171Inherited
Ubiquitin carboxyl-terminal hydrolase UCH-L1Inherited
Prokaryotic type KH domain (KH-domain type II)1Inherited
Ribosomal protein L30p/L7e1Inherited
Release factor1Inherited
D-ribose-5-phosphate isomerase (RpiA), lid domain1Inherited
Ribosomal L11/L12e N-terminal domain1Inherited
rRNA adenine dimethylase-like1Inherited
SH3-domain1Inherited
LysM domain1Inherited
Cryptochrome/photolyase FAD-binding domain1Inherited
NOL1/NOP2/sun1Inherited
R3H domain1Inherited
Cytidylyltransferase1Inherited
HEAT repeat1Inherited
Succinyl-CoA synthetase, beta-chain, N-terminal domain1Inherited
Nuclear movement domain1Inherited
RraA-like1Inherited
Homocysteine S-methyltransferase1Inherited
B56-like1Inherited
Kunitz (STI) inhibitors1Inherited
Amidase signature (AS) enzymes1Inherited
Ribosomal S5 protein, N-terminal domain1Inherited
Enolase N-terminal domain-like1Inherited
Ribosomal protein S27e1Inherited
Ribosomal protein L10e1Inherited
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex1Inherited
RibA-like1Inherited
Amine oxidase catalytic domain1Inherited
C1-like domain1Inherited
Amylase, catalytic domain1Inherited
Cystatins1Inherited
BolA-like1Inherited
Ribosomal protein S151Inherited
RNase III catalytic domain-like1Inherited
Diacylglycerol kinase-like1Inherited
LON domain-like1Inherited
Rubredoxin1Inherited
Transducin (alpha subunit), insertion domain1Inherited
Prefoldin1Inherited
ATP sulfurylase N-terminal domain1Inherited
MIF-related1Inherited
Ran-binding domain1Inherited
DNA repair protein MutS, domain I1Inherited
Creatinase/aminopeptidase1Inherited
Class-II DAHP synthetase1Inherited
Peptidyl-tRNA hydrolase-like1Inherited
Prokaryotic ribosomal protein L171Inherited
Eps15 homology domain (EH domain)1Inherited
SerA intervening domain-like1Inherited
Clc chloride channel1Inherited
Ring hydroxylating alpha subunit ISP domain1Inherited
Ribosomal protein L51Inherited
Sigma2 domain of RNA polymerase sigma factors1Inherited
Ribosomal protein L131Inherited
Casein kinase II beta subunit1Inherited
Clp protease, ClpP subunit1Inherited
Preprotein translocase SecE subunit1Inherited
UBX domain1Inherited
Aspartokinase allosteric domain-like1Inherited
Choline kinase1Inherited
Inosine monophosphate dehydrogenase (IMPDH)1Inherited
Sec1/munc18-like (SM) proteins1Inherited
RNB domain-like1Inherited
Cu,Zn superoxide dismutase-like1Inherited
5' nucleotidase-like1Inherited
6-phosphogluconate dehydrogenase-like, N-terminal domain1Inherited
Branched-chain alpha-keto acid dehydrogenase PP module1Inherited
Linker histone H1/H51Inherited
MYND zinc finger1Inherited
CO dehydrogenase molybdoprotein N-domain-like1Inherited
Magnesium transport protein CorA, transmembrane region1Inherited
Formate/glycerate dehydrogenases, substrate-binding domain1Inherited
Acyl-ACP thioesterase-like1Inherited
HD domain1Inherited
Lactate & malate dehydrogenases, C-terminal domain1Inherited
alpha-Amylases, C-terminal beta-sheet domain1Inherited
Acyl-CoA binding protein1Inherited
Ribosomal protein S101Inherited
Trehalose-6-phosphate synthase, OtsA1Inherited
Oxidoreductase molybdopterin-binding domain1Inherited
Ribosomal protein L141Inherited
P-domain of calnexin/calreticulin1Inherited
CAF1-like ribonuclease1Inherited
ATP-dependent DNA ligase catalytic domain1Inherited
Dihydrodipicolinate reductase-like1Inherited
Phosphoenolpyruvate mutase/Isocitrate lyase-like1Inherited
DJ-1/PfpI1Inherited
GAT domain1Inherited
Neurolysin-like1Inherited
Pseudouridine synthase I TruA1Inherited
Enolase1Inherited
LplA-like1Inherited
NadC N-terminal domain-like1Inherited
RNase Z-like1Inherited
Cyclin A/CDK2-associated p19, Skp21Inherited
PX domain1Inherited
CO dehydrogenase ISP C-domain like1Inherited
RuBisCo LSMT C-terminal, substrate-binding domain1Inherited
CO dehydrogenase flavoprotein C-terminal domain-like1Inherited
AMPK-beta glycogen binding domain-like1Inherited
Tail specific protease, catalytic domain1Inherited
NifU C-terminal domain-like1Inherited
Glyoxalase I (lactoylglutathione lyase)1Inherited
Folylpolyglutamate synthetase1Inherited
Sec63 C-terminal domain-like1Inherited
RelA/SpoT domain1Inherited
Glycolipid transfer protein, GLTP1Inherited
GroES1Inherited
PsbP-like1Inherited
Alpha subunit of glutamate synthase, C-terminal domain1Inherited
Deoxycytidylate deaminase-like1Inherited
Class I alpha-1;2-mannosidase, catalytic domain1Inherited
Smc hinge domain1Inherited
PNP-oxidase like1Inherited
Succinyl-CoA synthetase domains1Inherited
Cdc48 N-terminal domain-like1Inherited
Type II chitinase1Inherited
monodomain cytochrome c1Inherited
Peptide methionine sulfoxide reductase1Inherited
GroEL-like chaperone, intermediate domain1Inherited
Ribosomal proteins L15p and L18e1Inherited
Ribosomal protein L191Inherited
LEA14-like1Inherited
Group II chaperonin (CCT, TRIC), ATPase domain1Inherited
Cytochrome b51Inherited
AF1104-like1Inherited
Zn-finger domain of Sec23/241Inherited
Cytochrome p450 reductase N-terminal domain-like1Inherited
N-type ATP pyrophosphatases1Inherited
IPP isomerase-like1Inherited
BSD domain1Inherited
beta-carbonic anhydrase, cab1Inherited
Thiolase-related1Inherited
TAZ domain1Inherited
Shikimate kinase (AroK)1Inherited
Signal peptide-binding domain1Inherited
Gamma-glutamyl cyclotransferase-like1Inherited
Ribosomal protein L11Inherited
D-ribulose-5-phosphate 3-epimerase1Inherited
Plus31Inherited
NadC C-terminal domain-like1Inherited
Nucleoside diphosphate kinase, NDK1Inherited
SelR domain1Inherited
2Fe-2S ferredoxin-related1Inherited
Sedlin (SEDL)1Inherited
Chromo domain1Inherited
Histidine kinase1Inherited
Head domain of nucleotide exchange factor GrpE1Inherited
Ribosomal protein L31Inherited
VHS domain1Inherited
Plant transcriptional regulator PBF-21Inherited
Ribosomal protein L10-like1Inherited
Ribosomal protein L19 (L19e)1Inherited
Bacterial exopeptidase dimerisation domain1Inherited
Poly(ADP-ribose) polymerase, C-terminal domain1Inherited
NHL repeat1Inherited
CAT-like1Inherited
Ribosomal protein L39e1Inherited
Class I aldolase1Inherited
Ribonuclease PH domain 2-like1Inherited
Molybdenum-containing oxidoreductases-like dimerisation domain1Inherited
Calnexin/calreticulin1Inherited
UDP-glucose/GDP-mannose dehydrogenase dimerisation domain1Inherited
Phosphoribosylpyrophosphate synthetase-like1Inherited
MutT-like1Inherited
WrbA-like1Inherited
GDI-like N domain1Inherited
GroEL chaperone, ATPase domain1Inherited
Hypothetical protein YjiA, C-terminal domain1Inherited
BphP N-terminal domain-like1Inherited
BC ATP-binding domain-like1Inherited
Isochorismatase-like hydrolases1Inherited
NLI interacting factor-like phosphatase1Inherited
eIF1-like1Inherited
STAR domain1Inherited
Biotinyl/lipoyl-carrier proteins and domains1Inherited
Translational machinery components1Inherited
SOUL heme-binding protein1Inherited
PhzC/PhzF-like1Inherited
Methyl-CpG-binding domain, MBD1Inherited
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor1Inherited
Prokaryotic type I DNA topoisomerase1Inherited
ATP sulfurylase catalytic domain1Inherited
PUA domain1Inherited
PCI domain (PINT motif)1Inherited
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain1Inherited
BC N-terminal domain-like1Inherited
N-acetyl-l-glutamate kinase1Inherited
Phytochrome-specific domain1Inherited
ATP-dependent DNA ligase DNA-binding domain1Inherited
FAD/NAD-linked reductases, dimerisation (C-terminal) domain1Inherited
Biotin dependent carboxylase carboxyltransferase domain1Inherited
Ribosomal protein L37e1Inherited
EDF1-like1Inherited
SufE-like1Inherited
RplX-like1Inherited
Ribosomal protein S21Inherited
Glyoxalase II (hydroxyacylglutathione hydrolase)1Inherited
Pentapeptide repeats1Inherited
Tetrapyrrole methylase1Inherited
FKBP immunophilin/proline isomerase1Inherited
XPC-binding domain1Inherited
Phosphoglucomutase, first 3 domains1Inherited
BC C-terminal domain-like1Inherited
Ubiquitin activating enzymes (UBA)1Inherited
beta-sandwich domain of Sec23/241Inherited
Phosphoglycerate kinase1Inherited
Oxygen-evolving enhancer protein 3,1Inherited
DNA ligase/mRNA capping enzyme postcatalytic domain1Inherited
Helical domain of Sec23/241Inherited
Aldo-keto reductases (NADP)1Inherited
Molybdenum cofactor biosynthesis protein MoeB1Inherited
Ribosomal protein L31e1Inherited
NADPH-cytochrome p450 reductase FAD-binding domain-like1Inherited
Preprotein translocase SecY subunit1Inherited
eIF5a N-terminal domain-like1Inherited
LDH N-terminal domain-like1Inherited
RNA-polymerase beta1Inherited
Sec63 N-terminal domain1Inherited
YicI N-terminal domain-like1Inherited

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Supra-domain (Single|Duplex|Triple)

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Supra-domain (Single)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Electron transport accessory proteins0Direct
Molybdenum cofactor-binding domain0Direct
Cyclophilin-like0Direct
Metallo-dependent hydrolases0Direct
Mss4-like0Direct
Heme-dependent catalase-like0Direct
TAZ domain0Direct
Preprotein translocase SecE subunit0Direct
Ribosomal protein L10-like0Direct
Supernatant protein factor (SPF), C-terminal domain0Direct
CO dehydrogenase ISP C-domain like0Direct
Phosphoglucomutase, C-terminal domain0Direct
Ribosomal protein L40Direct
XPC-binding domain0Direct
Homocysteine S-methyltransferase0Direct
DNA repair protein MutS, domain I0Direct
ssDNA-binding transcriptional regulator domain0Direct
NSFL1 (p97 ATPase) cofactor p47, SEP domain0Direct
Cysteine alpha-hairpin motif0Direct
Peptide methionine sulfoxide reductase0Direct
Ligand-binding domain in the NO signalling and Golgi transport0Direct
RNase III domain-like0Direct
UDP-glucose/GDP-mannose dehydrogenase C-terminal domain0Direct
R3H domain0Direct
Ribosomal protein L10Direct
AF1104-like0Direct
NHL repeat0Direct
Endosomal sorting complex assembly domain0Direct
tRNA-binding arm0Direct
Rubredoxin-like0Direct
PapD-like0Direct
Formate/glycerate dehydrogenase catalytic domain-like0Direct
Aconitase iron-sulfur domain0Direct
Poly A polymerase C-terminal region-like0Direct
Peptidyl-tRNA hydrolase-like0Direct
eIF1-like0Direct
Tim10-like0Direct
Heme oxygenase-like0Direct
Carbon-nitrogen hydrolase0Direct
Quinoprotein alcohol dehydrogenase-like0Direct
Ribosomal protein S20Direct
E2F-DP heterodimerization region0Direct
Probable bacterial effector-binding domain0Direct
LuxS/MPP-like metallohydrolase0Direct
GroEL-intermediate domain like0Direct
Nicotinate/Quinolinate PRTase N-terminal domain-like0Direct
Putative isomerase YbhE0Direct
Ribosomal L11/L12e N-terminal domain0Direct
Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex0Direct
P-domain of calnexin/calreticulin0Direct
GINS helical bundle-like0Direct
Ribosomal protein L130Direct
MurD-like peptide ligases, peptide-binding domain0Direct
Serine metabolism enzymes domain0Direct
GlnB-like0Direct
Diaminopimelate epimerase-like0Direct
Succinyl-CoA synthetase domains0Direct
Chorismate mutase II0Direct
Signal peptide-binding domain0Direct
Lipocalins0Direct
beta-carbonic anhydrase, cab0Direct
N-terminal domain of the delta subunit of the F1F0-ATP synthase0Direct
Amine oxidase catalytic domain0Direct
LysM domain0Direct
Tetrapyrrole methylase0Direct
Oxygen-evolving enhancer protein 3,0Direct
Single hybrid motif0Direct
CYTH-like phosphatases0Direct
Glycolipid transfer protein, GLTP0Direct
Isochorismatase-like hydrolases0Direct
RuBisCo LSMT C-terminal, substrate-binding domain0Direct
Casein kinase II beta subunit0Direct
N-terminal, heterodimerisation domain of RBP7 (RpoE)0Direct
Ribosomal protein L140Direct
Ribosomal protein L30p/L7e0Direct
Ribulose-phoshate binding barrel0Direct
Ribosomal proteins L15p and L18e0Direct
Aldolase0Direct
S15/NS1 RNA-binding domain0Direct
Cu,Zn superoxide dismutase-like0Direct
Gamma-glutamyl cyclotransferase-like0Direct
Dimeric alpha+beta barrel0Direct
S-adenosylmethionine synthetase0Direct
Enolase C-terminal domain-like0Direct
EF-G C-terminal domain-like0Direct
Tetrahydrobiopterin biosynthesis enzymes-like0Direct
Peptidyl-tRNA hydrolase II0Direct
Sigma3 and sigma4 domains of RNA polymerase sigma factors0Direct
Sec1/munc18-like (SM) proteins0Direct
FAD/NAD-linked reductases, dimerisation (C-terminal) domain0Direct
Ribosomal protein S60Direct
RplX-like0Direct
Enolase N-terminal domain-like0Direct
TATA-box binding protein-like0Direct
LigT-like0Direct
Acyl-CoA binding protein0Direct
Ribosomal protein L29 (L29p)0Direct
Nitrite and sulphite reductase 4Fe-4S domain-like0Direct
Radical SAM enzymes0Direct
Formyltransferase0Direct
Prokaryotic ribosomal protein L170Direct
Chelatase0Direct
Release factor0Direct
Helical domain of Sec23/240Direct
CO dehydrogenase flavoprotein C-terminal domain-like0Direct
Plus3-like0Direct
PAH2 domain0Direct
LeuD/IlvD-like0Direct
alpha/beta knot0Direct
Domain of the SRP/SRP receptor G-proteins0Direct
Ribonuclease PH domain 2-like0Direct
Transducin (alpha subunit), insertion domain0Direct
beta-sandwich domain of Sec23/240Direct
Ribosomal protein L16p/L10e0Direct
Zn-finger domain of Sec23/240Direct
Tautomerase/MIF0Direct
Ribosomal proteins S24e, L23 and L15e0Direct
Coiled-coil domain of nucleotide exchange factor GrpE0Direct
Hypothetical protein YjiA, C-terminal domain0Direct
Nicotinate/Quinolinate PRTase C-terminal domain-like0Direct
Prefoldin0Direct
PLP-binding barrel0Direct
Lipoxigenase0Direct
C-terminal, gelsolin-like domain of Sec23/240Direct
Rhodanese/Cell cycle control phosphatase0Direct
CHY zinc finger-like0Direct
BolA-like0Direct
Ribosomal protein L31e0Direct
Zinc hairpin stack0Direct
Seven-hairpin glycosidases0Direct
Bacterial exopeptidase dimerisation domain0Direct
Pentapeptide repeat-like0Direct
Prokaryotic type KH domain (KH-domain type II)0Direct
DNA ligase/mRNA capping enzyme, catalytic domain0Direct
RraA-like0Direct
Head domain of nucleotide exchange factor GrpE0Direct
Creatinase/aminopeptidase0Direct
ATP synthase (F1-ATPase), gamma subunit0Direct
NAD(P)-linked oxidoreductase0Direct
FKBP-like0Direct
MurD-like peptide ligases, catalytic domain0Direct
Ribosomal protein L39e0Direct
Phosphoglucomutase, first 3 domains0Direct
Alpha subunit of glutamate synthase, C-terminal domain0Direct
Inosine monophosphate dehydrogenase (IMPDH)0Direct
DNA repair protein MutS, domain II0Direct
Cryptochrome/photolyase FAD-binding domain0Direct
Oxidoreductase molybdopterin-binding domain0Direct
Mitochondrial glycoprotein MAM33-like0Direct
Folate-binding domain0Direct
S13-like H2TH domain0Direct
Ribosomal protein S100Direct
BSD domain-like0Direct
Flavoproteins0Direct
Clc chloride channel0Direct
PX domain0Direct
AMPKBI-like0Direct
Creatinase/prolidase N-terminal domain0Direct
lambda repressor-like DNA-binding domains0Direct
Activating enzymes of the ubiquitin-like proteins0Direct
Crambin-like0Direct
PreATP-grasp domain0Direct
SH3-domain0Direct
EGF/Laminin0Direct
FAD-dependent thiol oxidase0Direct
FAH0Direct
Prokaryotic type I DNA topoisomerase0Direct
Saposin0Direct
RL5-like0Direct
L28p-like0Direct
Rudiment single hybrid motif0Direct
Ribosomal protein L19 (L19e)0Direct
Magnesium transport protein CorA, transmembrane region0Direct
CO dehydrogenase molybdoprotein N-domain-like0Direct
GroEL apical domain-like0Direct
HesB-like domain0Direct
Ribosomal protein L25-like0Direct
SIS domain0Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0Direct
NagB/RpiA/CoA transferase-like0Direct
Expressed protein At2g23090/F21P24.150Direct
GroEL equatorial domain-like0Direct
Nucleoside diphosphate kinase, NDK0Direct
D-ribose-5-phosphate isomerase (RpiA), lid domain0Direct
LDH C-terminal domain-like0Direct
Amidase signature (AS) enzymes0Direct
Cryptochrome/photolyase, N-terminal domain0Direct
Mog1p/PsbP-like0Direct
Globin-like0Direct
Sigma2 domain of RNA polymerase sigma factors0Direct
Preprotein translocase SecY subunit0Direct
YrdC/RibB0Direct
Phosphoglycerate kinase0Direct
ATP-dependent DNA ligase DNA-binding domain0Direct
Composite domain of metallo-dependent hydrolases0Direct
Cytochrome c0Direct
RibA-like0Direct
RNA-binding domain, RBD0.00004243Direct
Thioredoxin-like0.0002494Direct
ACT-like0.00285Inherited
Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain0.004514Inherited
6-phosphogluconate dehydrogenase C-terminal domain-like0.007138Inherited
NAD(P)-binding Rossmann-fold domains0.009906Inherited
Sm-like ribonucleoproteins0.01944Inherited

LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm

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Supra-domain (Duplex) in N- to C-terminal order

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
81296,52540
  • 81296 - E set domains
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    47473,52540
  • 47473 - EF-hand
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    52425,48173
  • 52425 - Cryptochrome/photolyase, N-terminal domain
  • 48173 - Cryptochrome/photolyase FAD-binding domain
    		• 0Direct
    55781,55781
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
    		• 0Direct
    46689,51905
  • 46689 - Homeodomain-like
  • 51905 - FAD/NAD(P)-binding domain
    		• 0Direct
    88798,50249
  • 88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE)
  • 50249 - Nucleic acid-binding proteins
    		• 0Direct
    56219,56219
  • 56219 - DNase I-like
  • 56219 - DNase I-like
    		• 0Direct
    53732,52016
  • 53732 - Aconitase iron-sulfur domain
  • 52016 - LeuD/IlvD-like
    		• 0Direct
    50729,55961
  • 50729 - PH domain-like
  • 55961 - Bet v1-like
    		• 0Direct
    54534,48452
  • 54534 - FKBP-like
  • 48452 - TPR-like
    		• 0Direct
    50249,52540
  • 50249 - Nucleic acid-binding proteins
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
    		• 0Direct
    52540,52317
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52317 - Class I glutamine amidotransferase-like
    		• 0Direct
    52540,47446
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47446 - Signal peptide-binding domain
    		• 0Direct
    64356,49447
  • 64356 - SNARE-like
  • 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
    		• 0Direct
    57850,57933
  • 57850 - RING/U-box
  • 57933 - TAZ domain
    		• 0Direct
    48179,52413
  • 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
  • 52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
    		• 0Direct
    54416,54416
  • 54416 - Amine oxidase N-terminal region
  • 54416 - Amine oxidase N-terminal region
    		• 0Direct
    55447,54665
  • 55447 - CO dehydrogenase flavoprotein C-terminal domain-like
  • 54665 - CO dehydrogenase molybdoprotein N-domain-like
    		• 0Direct
    53187,55031
  • 53187 - Zn-dependent exopeptidases
  • 55031 - Bacterial exopeptidase dimerisation domain
    		• 0Direct
    56059,51246
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 51246 - Rudiment single hybrid motif
    		• 0Direct
    55920,46785
  • 55920 - Creatinase/aminopeptidase
  • 46785 - "Winged helix" DNA-binding domain
    		• 0Direct
    158702,81296
  • 158702 - Sec63 N-terminal domain-like
  • 81296 - E set domains
    		• 0Direct
    161245,57850
  • 161245 - Zinc hairpin stack
  • 57850 - RING/U-box
    		• 0Direct
    54826,51604
  • 54826 - Enolase N-terminal domain-like
  • 51604 - Enolase C-terminal domain-like
    		• 0Direct
    51735,143548
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 143548 - Serine metabolism enzymes domain
    		• 0Direct
    158639,63748
  • 158639 - ENT-like
  • 63748 - Tudor/PWWP/MBT
    		• 0Direct
    82199,81822
  • 82199 - SET domain
  • 81822 - RuBisCo LSMT C-terminal, substrate-binding domain
    		• 0Direct
    51735,56327
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 56327 - LDH C-terminal domain-like
    		• 0Direct
    55821,142695
  • 55821 - YrdC/RibB
  • 142695 - RibA-like
    		• 0Direct
    51905,55424
  • 51905 - FAD/NAD(P)-binding domain
  • 55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain
    		• 0Direct
    52540,52058
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52058 - L domain-like
    		• 0Direct
    53300,81995
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
    		• 0Direct
    47005,52777
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
    		• 0Direct
    50022,55961
  • 50022 - ISP domain
  • 55961 - Bet v1-like
    		• 0Direct
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
    		• 0Direct
    54928,57756
  • 54928 - RNA-binding domain, RBD
  • 57756 - Retrovirus zinc finger-like domains
    		• 0Direct
    46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
    		• 0Direct
    48452,54277
  • 48452 - TPR-like
  • 54277 - CAD & PB1 domains
    		• 0Direct
    54747,46906
  • 54747 - Ribosomal L11/L12e N-terminal domain
  • 46906 - Ribosomal protein L11, C-terminal domain
    		• 0Direct
    56059,52210
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 52210 - Succinyl-CoA synthetase domains
    		• 0Direct
    46785,54928
  • 46785 - "Winged helix" DNA-binding domain
  • 54928 - RNA-binding domain, RBD
    		• 0Direct
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
    		• 0Direct
    52172,52172
  • 52172 - CheY-like
  • 52172 - CheY-like
    		• 0Direct
    53223,51735
  • 53223 - Aminoacid dehydrogenase-like, N-terminal domain
  • 51735 - NAD(P)-binding Rossmann-fold domains
    		• 0Direct
    48403,57850
  • 48403 - Ankyrin repeat
  • 57850 - RING/U-box
    		• 0Direct
    47473,103506
  • 47473 - EF-hand
  • 103506 - Mitochondrial carrier
    		• 0Direct
    101690,69065
  • 101690 - PAZ domain
  • 69065 - RNase III domain-like
    		• 0Direct
    81995,82919
  • 81995 - beta-sandwich domain of Sec23/24
  • 82919 - Zn-finger domain of Sec23/24
    		• 0Direct
    50104,50249
  • 50104 - Translation proteins SH3-like domain
  • 50249 - Nucleic acid-binding proteins
    		• 0Direct
    54416,49998
  • 54416 - Amine oxidase N-terminal region
  • 49998 - Amine oxidase catalytic domain
    		• 0Direct
    50249,57756
  • 50249 - Nucleic acid-binding proteins
  • 57756 - Retrovirus zinc finger-like domains
    		• 0Direct
    49723,48484
  • 49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)
  • 48484 - Lipoxigenase
    		• 0Direct
    51338,51556
  • 51338 - Composite domain of metallo-dependent hydrolases
  • 51556 - Metallo-dependent hydrolases
    		• 0Direct
    103481,103481
  • 103481 - Multidrug resistance efflux transporter EmrE
  • 103481 - Multidrug resistance efflux transporter EmrE
    		• 0Direct
    48403,52540
  • 48403 - Ankyrin repeat
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    46785,158702
  • 46785 - "Winged helix" DNA-binding domain
  • 158702 - Sec63 N-terminal domain-like
    		• 0Direct
    54211,55666
  • 54211 - Ribosomal protein S5 domain 2-like
  • 55666 - Ribonuclease PH domain 2-like
    		• 0Direct
    109604,81301
  • 109604 - HD-domain/PDEase-like
  • 81301 - Nucleotidyltransferase
    		• 0Direct
    54980,54980
  • 54980 - EF-G C-terminal domain-like
  • 54980 - EF-G C-terminal domain-like
    		• 0Direct
    55021,56112
  • 55021 - ACT-like
  • 56112 - Protein kinase-like (PK-like)
    		• 0Direct
    54160,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    81811,82754
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
    		• 0Direct
    51230,47005
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
    		• 0Direct
    55781,55785
  • 55781 - GAF domain-like
  • 55785 - PYP-like sensor domain (PAS domain)
    		• 0Direct
    53738,55957
  • 53738 - Phosphoglucomutase, first 3 domains
  • 55957 - Phosphoglucomutase, C-terminal domain
    		• 0Direct
    63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
    		• 0Direct
    161219,161245
  • 161219 - CHY zinc finger-like
  • 161245 - Zinc hairpin stack
    		• 0Direct
    50156,52096
  • 50156 - PDZ domain-like
  • 52096 - ClpP/crotonase
    		• 0Direct
    54665,56003
  • 54665 - CO dehydrogenase molybdoprotein N-domain-like
  • 56003 - Molybdenum cofactor-binding domain
    		• 0Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
    		• 0Direct
    102848,54236
  • 102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
  • 54236 - Ubiquitin-like
    		• 0Direct
    52087,101576
  • 52087 - CRAL/TRIO domain
  • 101576 - Supernatant protein factor (SPF), C-terminal domain
    		• 0Direct
    52540,48403
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 48403 - Ankyrin repeat
    		• 0Direct
    57850,46689
  • 57850 - RING/U-box
  • 46689 - Homeodomain-like
    		• 0Direct
    52540,90002
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 90002 - Hypothetical protein YjiA, C-terminal domain
    		• 0Direct
    75471,75471
  • 75471 - YhbY-like
  • 75471 - YhbY-like
    		• 0Direct
    48371,50978
  • 48371 - ARM repeat
  • 50978 - WD40 repeat-like
    		• 0Direct
    47384,55874
  • 47384 - Homodimeric domain of signal transducing histidine kinase
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
    		• 0Direct
    53850,55021
  • 53850 - Periplasmic binding protein-like II
  • 55021 - ACT-like
    		• 0Direct
    81383,54518
  • 81383 - F-box domain
  • 54518 - Tubby C-terminal domain-like
    		• 0Direct
    50249,55681
  • 50249 - Nucleic acid-binding proteins
  • 55681 - Class II aaRS and biotin synthetases
    		• 0Direct
    81995,81811
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
    		• 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
    		• 0Direct
    88946,88659
  • 88946 - Sigma2 domain of RNA polymerase sigma factors
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
    		• 0Direct
    81296,51445
  • 81296 - E set domains
  • 51445 - (Trans)glycosidases
    		• 0Direct
    47762,47762
  • 47762 - PAH2 domain
  • 47762 - PAH2 domain
    		• 0Direct
    52317,52317
  • 52317 - Class I glutamine amidotransferase-like
  • 52317 - Class I glutamine amidotransferase-like
    		• 0Direct
    54585,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    54637,54637
  • 54637 - Thioesterase/thiol ester dehydrase-isomerase
  • 54637 - Thioesterase/thiol ester dehydrase-isomerase
    		• 0Direct
    81324,81324
  • 81324 - Voltage-gated potassium channels
  • 81324 - Voltage-gated potassium channels
    		• 0Direct
    53756,56784
  • 53756 - UDP-Glycosyltransferase/glycogen phosphorylase
  • 56784 - HAD-like
    		• 0Direct
    52283,51735
  • 52283 - Formate/glycerate dehydrogenase catalytic domain-like
  • 51735 - NAD(P)-binding Rossmann-fold domains
    		• 0Direct
    53633,55021
  • 53633 - Carbamate kinase-like
  • 55021 - ACT-like
    		• 0Direct
    81301,81891
  • 81301 - Nucleotidyltransferase
  • 81891 - Poly A polymerase C-terminal region-like
    		• 0Direct
    54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
    		• 0Direct
    69065,54768
  • 69065 - RNase III domain-like
  • 54768 - dsRNA-binding domain-like
    		• 0Direct
    56091,50249
  • 56091 - DNA ligase/mRNA capping enzyme, catalytic domain
  • 50249 - Nucleic acid-binding proteins
    		• 0Direct
    52402,52833
  • 52402 - Adenine nucleotide alpha hydrolases-like
  • 52833 - Thioredoxin-like
    		• 0Direct
    47473,51695
  • 47473 - EF-hand
  • 51695 - PLC-like phosphodiesterases
    		• 0Direct
    100950,75445
  • 100950 - NagB/RpiA/CoA transferase-like
  • 75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain
    		• 0Direct
    54768,54211
  • 54768 - dsRNA-binding domain-like
  • 54211 - Ribosomal protein S5 domain 2-like
    		• 0Direct
    46689,46785
  • 46689 - Homeodomain-like
  • 46785 - "Winged helix" DNA-binding domain
    		• 0Direct
    50447,54980
  • 50447 - Translation proteins
  • 54980 - EF-G C-terminal domain-like
    		• 0Direct
    47364,52540
  • 47364 - Domain of the SRP/SRP receptor G-proteins
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    53383,53383
  • 53383 - PLP-dependent transferases
  • 53383 - PLP-dependent transferases
    		• 0Direct
    101238,46934
  • 101238 - XPC-binding domain
  • 46934 - UBA-like
    		• 0Direct
    57850,49599
  • 57850 - RING/U-box
  • 49599 - TRAF domain-like
    		• 0Direct
    143548,55021
  • 143548 - Serine metabolism enzymes domain
  • 55021 - ACT-like
    		• 0Direct
    54695,48403
  • 54695 - POZ domain
  • 48403 - Ankyrin repeat
    		• 0Direct
    158702,52540
  • 158702 - Sec63 N-terminal domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    50985,50985
  • 50985 - RCC1/BLIP-II
  • 50985 - RCC1/BLIP-II
    		• 0Direct
    47741,56176
  • 47741 - CO dehydrogenase ISP C-domain like
  • 56176 - FAD-binding/transporter-associated domain-like
    		• 0Direct
    55874,52172
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 52172 - CheY-like
    		• 0Direct
    55785,55785
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
    		• 0Direct
    49899,63887
  • 49899 - Concanavalin A-like lectins/glucanases
  • 63887 - P-domain of calnexin/calreticulin
    		• 0Direct
    88659,88659
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
    		• 0Direct
    82919,53300
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
    		• 0Direct
    101908,56219
  • 101908 - Putative isomerase YbhE
  • 56219 - DNase I-like
    		• 0Direct
    55785,55781
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55781 - GAF domain-like
    		• 0Direct
    54909,54909
  • 54909 - Dimeric alpha+beta barrel
  • 54909 - Dimeric alpha+beta barrel
    		• 0Direct
    49599,49599
  • 49599 - TRAF domain-like
  • 49599 - TRAF domain-like
    		• 0Direct
    47661,58038
  • 47661 - t-snare proteins
  • 58038 - SNARE fusion complex
    		• 0Direct
    56235,52402
  • 56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
  • 52402 - Adenine nucleotide alpha hydrolases-like
    		• 0Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    53300,57850
  • 53300 - vWA-like
  • 57850 - RING/U-box
    		• 0Direct
    52440,56059
  • 52440 - PreATP-grasp domain
  • 56059 - Glutathione synthetase ATP-binding domain-like
    		• 0Direct
    57850,54928
  • 57850 - RING/U-box
  • 54928 - RNA-binding domain, RBD
    		• 0Direct
    82171,53474
  • 82171 - DPP6 N-terminal domain-like
  • 53474 - alpha/beta-Hydrolases
    		• 0Direct
    53738,53738
  • 53738 - Phosphoglucomutase, first 3 domains
  • 53738 - Phosphoglucomutase, first 3 domains
    		• 0Direct
    58014,51064
  • 58014 - Coiled-coil domain of nucleotide exchange factor GrpE
  • 51064 - Head domain of nucleotide exchange factor GrpE
    		• 0Direct
    48452,46565
  • 48452 - TPR-like
  • 46565 - Chaperone J-domain
    		• 0Direct
    56112,48371
  • 56112 - Protein kinase-like (PK-like)
  • 48371 - ARM repeat
    		• 0Direct
    50630,47862
  • 50630 - Acid proteases
  • 47862 - Saposin
    		• 0Direct
    117916,117916
  • 117916 - Fe-S cluster assembly (FSCA) domain-like
  • 117916 - Fe-S cluster assembly (FSCA) domain-like
    		• 0Direct
    56176,55447
  • 56176 - FAD-binding/transporter-associated domain-like
  • 55447 - CO dehydrogenase flavoprotein C-terminal domain-like
    		• 0Direct
    47592,159042
  • 47592 - SWIB/MDM2 domain
  • 159042 - Plus3-like
    		• 0Direct
    54292,47741
  • 54292 - 2Fe-2S ferredoxin-like
  • 47741 - CO dehydrogenase ISP C-domain like
    		• 0Direct
    88697,52374
  • 88697 - PUA domain-like
  • 52374 - Nucleotidylyl transferase
    		• 0Direct
    56524,81296
  • 56524 - Oxidoreductase molybdopterin-binding domain
  • 81296 - E set domains
    		• 0Direct
    117018,56091
  • 117018 - ATP-dependent DNA ligase DNA-binding domain
  • 56091 - DNA ligase/mRNA capping enzyme, catalytic domain
    		• 0Direct
    51735,55347
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
    		• 0.004514Inherited
    51735,48179
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
    		• 0.008984Inherited

    LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm

    Jump to [ Top · Hierarchy ]

    Supra-domain (Triple) in N- to C-terminal order

    (    show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    117018,56091,50249
  • 117018 - ATP-dependent DNA ligase DNA-binding domain
  • 56091 - DNA ligase/mRNA capping enzyme, catalytic domain
  • 50249 - Nucleic acid-binding proteins
    		• 0Direct
    81296,51445,51011
  • 81296 - E set domains
  • 51445 - (Trans)glycosidases
  • 51011 - Glycosyl hydrolase domain
    		• 0Direct
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
    		• 0Direct
    81995,82919,53300
  • 81995 - beta-sandwich domain of Sec23/24
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
    		• 0Direct
    88946,88659,88659
  • 88946 - Sigma2 domain of RNA polymerase sigma factors
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
  • 88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
    		• 0Direct
    54534,54534,48452
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 48452 - TPR-like
    		• 0Direct
    52540,46785,158702
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 46785 - "Winged helix" DNA-binding domain
  • 158702 - Sec63 N-terminal domain-like
    		• 0Direct
    52540,52540,46785
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 46785 - "Winged helix" DNA-binding domain
    		• 0Direct
    53738,53738,53738
  • 53738 - Phosphoglucomutase, first 3 domains
  • 53738 - Phosphoglucomutase, first 3 domains
  • 53738 - Phosphoglucomutase, first 3 domains
    		• 0Direct
    49785,49785,51445
  • 49785 - Galactose-binding domain-like
  • 49785 - Galactose-binding domain-like
  • 51445 - (Trans)glycosidases
    		• 0Direct
    54534,54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 54534 - FKBP-like
    		• 0Direct
    53633,55021,55021
  • 53633 - Carbamate kinase-like
  • 55021 - ACT-like
  • 55021 - ACT-like
    		• 0Direct
    55447,54665,56003
  • 55447 - CO dehydrogenase flavoprotein C-terminal domain-like
  • 54665 - CO dehydrogenase molybdoprotein N-domain-like
  • 56003 - Molybdenum cofactor-binding domain
    		• 0Direct
    50447,54980,54980
  • 50447 - Translation proteins
  • 54980 - EF-G C-terminal domain-like
  • 54980 - EF-G C-terminal domain-like
    		• 0Direct
    81995,81811,82754
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
    		• 0Direct
    47364,52540,47446
  • 47364 - Domain of the SRP/SRP receptor G-proteins
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47446 - Signal peptide-binding domain
    		• 0Direct
    52047,52058,56112
  • 52047 - RNI-like
  • 52058 - L domain-like
  • 56112 - Protein kinase-like (PK-like)
    		• 0Direct
    52058,52047,56112
  • 52058 - L domain-like
  • 52047 - RNI-like
  • 56112 - Protein kinase-like (PK-like)
    		• 0Direct
    55781,47384,55874
  • 55781 - GAF domain-like
  • 47384 - Homodimeric domain of signal transducing histidine kinase
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
    		• 0Direct
    54160,52540,52540
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    46689,51905,54373
  • 46689 - Homeodomain-like
  • 51905 - FAD/NAD(P)-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
    		• 0Direct
    54160,54160,52540
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
    		• 0Direct
    47741,56176,55447
  • 47741 - CO dehydrogenase ISP C-domain like
  • 56176 - FAD-binding/transporter-associated domain-like
  • 55447 - CO dehydrogenase flavoprotein C-terminal domain-like
    		• 0Direct
    82919,53300,81995
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
    		• 0Direct
    57850,57850,57933
  • 57850 - RING/U-box
  • 57850 - RING/U-box
  • 57933 - TAZ domain
    		• 0Direct
    46938,52087,101576
  • 46938 - CRAL/TRIO N-terminal domain
  • 52087 - CRAL/TRIO domain
  • 101576 - Supernatant protein factor (SPF), C-terminal domain
    		• 0Direct
    52540,50447,54980
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 54980 - EF-G C-terminal domain-like
    		• 0Direct
    54585,52540,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    81296,52540,48403
  • 81296 - E set domains
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 48403 - Ankyrin repeat
    		• 0Direct
    46785,158702,52540
  • 46785 - "Winged helix" DNA-binding domain
  • 158702 - Sec63 N-terminal domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    46785,158702,81296
  • 46785 - "Winged helix" DNA-binding domain
  • 158702 - Sec63 N-terminal domain-like
  • 81296 - E set domains
    		• 0Direct
    63411,63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
    		• 0Direct
    47384,55874,52172
  • 47384 - Homodimeric domain of signal transducing histidine kinase
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 52172 - CheY-like
    		• 0Direct
    90209,90209,90209
  • 90209 - Ran binding protein zinc finger-like
  • 90209 - Ran binding protein zinc finger-like
  • 90209 - Ran binding protein zinc finger-like
    		• 0Direct
    50249,57756,57756
  • 50249 - Nucleic acid-binding proteins
  • 57756 - Retrovirus zinc finger-like domains
  • 57756 - Retrovirus zinc finger-like domains
    		• 0Direct
    51230,47005,52777
  • 51230 - Single hybrid motif
  • 47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
  • 52777 - CoA-dependent acyltransferases
    		• 0Direct
    47473,51695,49562
  • 47473 - EF-hand
  • 51695 - PLC-like phosphodiesterases
  • 49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
    		• 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
    		• 0Direct
    161219,161245,57850
  • 161219 - CHY zinc finger-like
  • 161245 - Zinc hairpin stack
  • 57850 - RING/U-box
    		• 0Direct
    54416,54416,49998
  • 54416 - Amine oxidase N-terminal region
  • 54416 - Amine oxidase N-terminal region
  • 49998 - Amine oxidase catalytic domain
    		• 0Direct
    53300,81995,81811
  • 53300 - vWA-like
  • 81995 - beta-sandwich domain of Sec23/24
  • 81811 - Helical domain of Sec23/24
    		• 0Direct
    55781,55781,55785
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
  • 55785 - PYP-like sensor domain (PAS domain)
    		• 0Direct
    56176,55447,54665
  • 56176 - FAD-binding/transporter-associated domain-like
  • 55447 - CO dehydrogenase flavoprotein C-terminal domain-like
  • 54665 - CO dehydrogenase molybdoprotein N-domain-like
    		• 0Direct
    52440,56059,51246
  • 52440 - PreATP-grasp domain
  • 56059 - Glutathione synthetase ATP-binding domain-like
  • 51246 - Rudiment single hybrid motif
    		• 0Direct
    158702,52540,52540
  • 158702 - Sec63 N-terminal domain-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    55785,55781,55781
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55781 - GAF domain-like
  • 55781 - GAF domain-like
    		• 0Direct
    53738,53738,55957
  • 53738 - Phosphoglucomutase, first 3 domains
  • 53738 - Phosphoglucomutase, first 3 domains
  • 55957 - Phosphoglucomutase, C-terminal domain
    		• 0Direct
    51735,48179,52413
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
  • 52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
    		• 0Direct
    54292,47741,56176
  • 54292 - 2Fe-2S ferredoxin-like
  • 47741 - CO dehydrogenase ISP C-domain like
  • 56176 - FAD-binding/transporter-associated domain-like
    		• 0Direct
    52283,51735,143548
  • 52283 - Formate/glycerate dehydrogenase catalytic domain-like
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 143548 - Serine metabolism enzymes domain
    		• 0Direct
    51735,143548,55021
  • 51735 - NAD(P)-binding Rossmann-fold domains
  • 143548 - Serine metabolism enzymes domain
  • 55021 - ACT-like
    		• 0Direct
    50692,54585,52540
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
    		• 0Direct
    55781,55785,55785
  • 55781 - GAF domain-like
  • 55785 - PYP-like sensor domain (PAS domain)
  • 55785 - PYP-like sensor domain (PAS domain)
    		• 0Direct

    LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm

    Distribution on sTOL

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    Locations of visitors to this page Using dcGO in your work, please cite Nucleic Acids Research 2013, 41(Database issue):D536-44.
    On questions and detailed information, please contact Dr. Hai Fang or Prof. Julian Gough