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Yeast Phenotype (YP): competitive fitness 
(show info)
Biomedical Ontology
Like Gene Ontology (GO), biomedical ontology such as phenotype ontology classifies and organizes gene-mutant/null phenotypic information from the very general at the top to more specific terms in the directed acyclic graph (DAG) by viewing an individual term as a node and its relations to parental terms (allowing for multiple parents) as directed edges. To navigate this hierarchy, we display all parental phenotypic terms to the current phenotypic term of interest ordered by their shortest distances to the current term. Also, only direct children phenotypic terms of the current phenotypic term are listed. Biomedical ontologies we have incorporated are as follows:
- Disease Ontology (DO) Ontology DO semantically integrates disease and medical vocabularies through extensive cross mapping of DO terms to MeSH, ICD, NCI’s thesaurus, SNOMED and OMIM.
- Human Phenotype (HP) Ontology HP captures phenotypic abnormalities that are described in OMIM, along with the corresponding disease-causing genes. It includes three complementary biological concepts: Mode_of_Inheritance (MI), ONset_and_clinical_course (ON), and Phenotypic_Abnormality (PA).
- Mouse Phenotype (MP) Ontology MP describes phenotypes of the mouse after a specific gene is genetically disrupted. Using it, Mouse Genome Informatics (MGI) provides high-coverate gene-level phenotypes for the mouse.
- Worm Phenotype (WP) Ontology WP classifies and organizes phenotype descriptions for C. elegans and other nematodes. Using it, WormBase provides primary resource for phenotype annotations for C. elegans.
- Yeast Phenotype (YP) Ontology Based on YP which is the major contributor to the ‘Ascomycete phenotype ontology’, Saccharomyces Genome Database (SGD) provides single mutant phenotypes for every gene in the yeast genome.
- Fly Phenotype (FP) Ontology FP refers to FlyBase controlled vocabulary. Specifically, a structured controlled vocabulary is used for the annotation of alleles (for their mutagen etc) in FlyBase.
- Fly Anatomy (FA) Ontology FA is a structured controlled vocabulary of the anatomy of Drosophila melanogaster, used for the description of phenotypes and where a gene is expressed.
- Zebrafish Anatomy (ZA) Ontology ZA displays anatomical terms of the zebrafish using standard anatomical nomenclature, together with affected genes.
- Xenopus Anatomy (XA) Ontology XA represents the lineage of tissues and the timing of development for frogs (Xenopus laevis and Xenopus tropicalis). It is used to annotate Xenopus gene expression patterns and mutant and morphant phenotypes.
- Arabidopsis Plant Ontology (AP) Ontology As a major contributor to Plant Ontology which describes plant anatomical and morphological structures (AN) and growth and developmental stages (DE), the Arabidopsis Information Resource (TAIR) provides arabidopsis plant ontology annotations for the model higher plant Arabidopsis thaliana.
- Enzyme Commission (EC) Ontology Each enzyme is allocated a four-digit EC number, the first three digits of which define the reaction catalysed and the fourth of which is a unique identifier (serial number). Each enzyme is also assigned a systematic name that uniquely defines the reaction catalysed.
- UniProtKB KeyWords (KW) Ontology Keywords in UniProtKB are controlled vocabulary, providing a summary of the entry content and are used to index UniProtKB/Swiss-Prot entries based on 10 categories (the category "Technical term" being excluded here). Each keyword is attributed manually to UniProtKB/Swiss-Prot entries and automatically to UniProtKB/TrEMBL entries (according to specific annotation rules).
- CTD Diseases (CD) Ontology CD is MEDIC disease vocabulary that is modified by CTD from the "Diseases" [C] branch of Medical Subject Headings (MeSH), combined with genetic disorders from the Online Mendelian Inheritance in OMIM database.
- CTD Chemicals (CC) Ontology CC is chemical vocabulary that is adapted by CTD from the "Chemicals and Drugs" category and Supplementary Concept Records of Medical Subject Headings (MeSH, a hierarchical vocabulary used to index articles for MEDLINE/PubMed).
Jump to [ Top · Hierarchy · Annotations ]
Root: YP Hierarchy (yeast phenotype from Ascomycete phenotype ontology)
Jump to [ Top · Hierarchy ]
Superfamily( show details)
Highlighted in gray are those with FDR_all>0.001
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| Ankyrin repeat | 0 | DIRECT |
| FAD-linked oxidoreductase | 0 | DIRECT |
| FMN-linked oxidoreductases | 0 | DIRECT |
| RBP11-like subunits of RNA polymerase | 0 | DIRECT |
| Heme oxygenase-like | 0 | DIRECT |
| Cyclophilin-like | 0 | DIRECT |
| TGS-like | 0 | DIRECT |
| YjgF-like | 0 | DIRECT |
| Fumarate reductase respiratory complex transmembrane subunits | 0 | DIRECT |
| HIT-like | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| Protease propeptides/inhibitors | 0 | DIRECT |
| Ferritin-like | 0 | DIRECT |
| PreATP-grasp domain | 0 | DIRECT |
| F1F0 ATP synthase subunit C | 0 | DIRECT |
| Cullin repeat-like | 0 | DIRECT |
| Formate/glycerate dehydrogenase catalytic domain-like | 0 | DIRECT |
| Ribosomal protein L22 | 0 | DIRECT |
| The spindle assembly checkpoint protein mad2 | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| Riboflavin synthase domain-like | 0 | DIRECT |
| S13-like H2TH domain | 0 | DIRECT |
| Nucleoporin domain | 0 | DIRECT |
| HIT/MYND zinc finger-like | 0 | DIRECT |
| ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | DIRECT |
| Cation efflux protein transmembrane domain-like | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | DIRECT |
| Restriction endonuclease-like | 0 | DIRECT |
| KA1-like | 0 | DIRECT |
| Radical SAM enzymes | 0 | DIRECT |
| ThrRS/AlaRS common domain | 0 | DIRECT |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
| YAP1 redox domain | 0 | DIRECT |
| Rhomboid-like | 0 | DIRECT |
| EPT/RTPC-like | 0 | DIRECT |
| Phosphoglycerate mutase-like | 0 | DIRECT |
| PEBP-like | 0 | DIRECT |
| Concanavalin A-like lectins/glucanases | 0 | DIRECT |
| HRDC-like | 0 | DIRECT |
| NagB/RpiA/CoA transferase-like | 0 | DIRECT |
| Cullin homology domain | 0 | DIRECT |
| GST C-terminal domain-like | 0 | DIRECT |
| FMN-binding split barrel | 0 | DIRECT |
| Carbohydrate phosphatase | 0 | DIRECT |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
| FabD/lysophospholipase-like | 0 | DIRECT |
| L-aspartase-like | 0 | DIRECT |
| Aminoacid dehydrogenase-like, N-terminal domain | 0 | DIRECT |
| Seven-hairpin glycosidases | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| DNase I-like | 0 | DIRECT |
| Ferredoxin reductase-like, C-terminal NADP-linked domain | 0 | DIRECT |
| Aldolase | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| Clathrin adaptor appendage domain | 0 | DIRECT |
| Chromo domain-like | 0 | DIRECT |
| LDH C-terminal domain-like | 0 | DIRECT |
| Carbamate kinase-like | 0 | DIRECT |
| ACT-like | 0 | DIRECT |
| FAD-linked oxidases, C-terminal domain | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| ValRS/IleRS/LeuRS editing domain | 0 | DIRECT |
| Translational machinery components | 0 | DIRECT |
| E set domains | 0 | DIRECT |
| SAP domain | 0 | DIRECT |
| Citrate synthase | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| PLP-binding barrel | 0 | DIRECT |
| Tubulin C-terminal domain-like | 0 | DIRECT |
| Nucleotide-binding domain | 0 | DIRECT |
| Rudiment single hybrid motif | 0 | DIRECT |
| Protein prenylyltransferase | 0 | DIRECT |
| LexA/Signal peptidase | 0 | DIRECT |
| PX domain | 0 | DIRECT |
| ALDH-like | 0 | DIRECT |
| GHMP Kinase, C-terminal domain | 0 | DIRECT |
| Activating enzymes of the ubiquitin-like proteins | 0 | DIRECT |
| tRNA-intron endonuclease catalytic domain-like | 0 | DIRECT |
| WW domain | 0 | DIRECT |
| PP2C-like | 0 | DIRECT |
| DNA-glycosylase | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| FKBP-like | 0 | DIRECT |
| Cupredoxins | 0 | DIRECT |
| HLH, helix-loop-helix DNA-binding domain | 0 | DIRECT |
| Endosomal sorting complex assembly domain | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| Phosphoenolpyruvate/pyruvate domain | 0 | DIRECT |
| HMA, heavy metal-associated domain | 0 | DIRECT |
| DNA repair protein MutS, domain I | 0 | DIRECT |
| Amidase signature (AS) enzymes | 0 | DIRECT |
| PA domain | 0 | DIRECT |
| (Phosphotyrosine protein) phosphatases II | 0 | DIRECT |
| Cap-Gly domain | 0 | DIRECT |
| Rhodanese/Cell cycle control phosphatase | 0 | DIRECT |
| Trimeric LpxA-like enzymes | 0 | DIRECT |
| Cytochrome P450 | 0 | DIRECT |
| ClpP/crotonase | 0 | DIRECT |
| Glutamine synthetase/guanido kinase | 0 | DIRECT |
| Acid proteases | 0 | DIRECT |
| Acyl-CoA N-acyltransferases (Nat) | 0 | DIRECT |
| GroEL apical domain-like | 0 | DIRECT |
| Cytochrome b5-like heme/steroid binding domain | 0 | DIRECT |
| GTPase activation domain, GAP | 0 | DIRECT |
| Regulator of G-protein signaling, RGS | 0 | DIRECT |
| VPS9 domain | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| GYF domain | 0 | DIRECT |
| SAICAR synthase-like | 0 | DIRECT |
| CRAL/TRIO N-terminal domain | 0 | DIRECT |
| PIN domain-like | 0 | DIRECT |
| LeuD/IlvD-like | 0 | DIRECT |
| Thiolase-like | 0 | DIRECT |
| Ubiquitin-like | 0 | DIRECT |
| EF-G C-terminal domain-like | 0 | DIRECT |
| DNA repair protein MutS, domain II | 0 | DIRECT |
| Kelch motif | 0 | DIRECT |
| DNA ligase/mRNA capping enzyme, catalytic domain | 0 | DIRECT |
| Ras GEF | 0 | DIRECT |
| Ribosomal protein S8 | 0 | DIRECT |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| HMG-box | 0 | DIRECT |
| CRAL/TRIO domain | 0 | DIRECT |
| Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0 | DIRECT |
| MurD-like peptide ligases, peptide-binding domain | 0 | DIRECT |
| Prefoldin | 0 | DIRECT |
| DPP6 N-terminal domain-like | 0 | DIRECT |
| beta-beta-alpha zinc fingers | 0 | DIRECT |
| CCCH zinc finger | 0 | DIRECT |
| Actin depolymerizing proteins | 0 | DIRECT |
| Ribokinase-like | 0 | DIRECT |
| F-box domain | 0 | DIRECT |
| MurD-like peptide ligases, catalytic domain | 0 | DIRECT |
| ArfGap/RecO-like zinc finger | 0 | DIRECT |
| Galactose-binding domain-like | 0 | DIRECT |
| Glycerol-3-phosphate (1)-acyltransferase | 0 | DIRECT |
| GroEL equatorial domain-like | 0 | DIRECT |
| Tricorn protease domain 2 | 0 | DIRECT |
| FAD-binding/transporter-associated domain-like | 0 | DIRECT |
| Nop domain | 0 | DIRECT |
| Subtilisin-like | 0 | DIRECT |
| Transferrin receptor-like dimerisation domain | 0 | DIRECT |
| Oligoxyloglucan reducing end-specific cellobiohydrolase | 0 | DIRECT |
| NAD kinase/diacylglycerol kinase-like | 0 | DIRECT |
| HSP20-like chaperones | 0 | DIRECT |
| Pseudouridine synthase | 0 | DIRECT |
| RCC1/BLIP-II | 0 | DIRECT |
| Nucleotidyltransferase | 0 | DIRECT |
| Zinc beta-ribbon | 0 | DIRECT |
| BAR/IMD domain-like | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Metallo-dependent hydrolases | 0 | DIRECT |
| DNA repair protein MutS, domain III | 0 | DIRECT |
| RNI-like | 0 | DIRECT |
| Aquaporin-like | 0 | DIRECT |
| Multidrug resistance efflux transporter EmrE | 0 | DIRECT |
| Ammonium transporter | 0 | DIRECT |
| Mss4-like | 0 | DIRECT |
| Nucleotide-diphospho-sugar transferases | 0 | DIRECT |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | DIRECT |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| Methylglyoxal synthase-like | 0 | DIRECT |
| Thioesterase/thiol ester dehydrase-isomerase | 0 | DIRECT |
| CorA soluble domain-like | 0 | DIRECT |
| Homo-oligomeric flavin-containing Cys decarboxylases, HFCD | 0 | DIRECT |
| Smc hinge domain | 0 | DIRECT |
| t-snare proteins | 0 | DIRECT |
| post-HMGL domain-like | 0 | DIRECT |
| Glutathione synthetase ATP-binding domain-like | 0 | DIRECT |
| Tubulin nucleotide-binding domain-like | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| CheY-like | 0 | DIRECT |
| post-AAA+ oligomerization domain-like | 0 | DIRECT |
| PAP/OAS1 substrate-binding domain | 0 | DIRECT |
| Ypt/Rab-GAP domain of gyp1p | 0 | DIRECT |
| Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
| Phospholipase D/nuclease | 0 | DIRECT |
| DNA-binding domain of Mlu1-box binding protein MBP1 | 0 | DIRECT |
| FtsH protease domain-like | 0 | DIRECT |
| Calponin-homology domain, CH-domain | 0 | DIRECT |
| HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
| Galactose mutarotase-like | 0 | DIRECT |
| Creatinase/prolidase N-terminal domain | 0 | DIRECT |
| 4'-phosphopantetheinyl transferase | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| Sec1/munc18-like (SM) proteins | 0 | DIRECT |
| L domain-like | 0 | DIRECT |
| SpoIIaa-like | 0 | DIRECT |
| Nudix | 0 | DIRECT |
| RmlC-like cupins | 0 | DIRECT |
| GroEL-intermediate domain like | 0 | DIRECT |
| PR-1-like | 0 | DIRECT |
| Sec63 N-terminal domain-like | 0 | DIRECT |
| Clavaminate synthase-like | 0 | DIRECT |
| Hect, E3 ligase catalytic domain | 0 | DIRECT |
| DnaJ/Hsp40 cysteine-rich domain | 0 | DIRECT |
| Family A G protein-coupled receptor-like | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| Single hybrid motif | 0 | DIRECT |
| GAT-like domain | 0 | DIRECT |
| SRF-like | 0 | DIRECT |
| Cytochrome c | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Mitochondrial cytochrome c oxidase subunit IV | 0 | DIRECT |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | DIRECT |
| Sialidases | 0 | DIRECT |
| Ribosomal protein L6 | 0 | DIRECT |
| Alpha-L RNA-binding motif | 0 | DIRECT |
| PH domain-like | 0 | DIRECT |
| PYP-like sensor domain (PAS domain) | 0 | DIRECT |
| Zinc domain conserved in yeast copper-regulated transcription factors | 0 | DIRECT |
| Alkaline phosphatase-like | 0 | DIRECT |
| PLC-like phosphodiesterases | 0 | DIRECT |
| Six-hairpin glycosidases | 0 | DIRECT |
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| Ankyrin repeat | 0 | Direct |
| FAD-linked oxidoreductase | 0 | Direct |
| FMN-linked oxidoreductases | 0 | Direct |
| RBP11-like subunits of RNA polymerase | 0 | Direct |
| Heme oxygenase-like | 0 | Direct |
| Cyclophilin-like | 0 | Direct |
| TGS-like | 0 | Direct |
| YjgF-like | 0 | Direct |
| Fumarate reductase respiratory complex transmembrane subunits | 0 | Direct |
| HIT-like | 0 | Direct |
| SH3-domain | 0 | Direct |
| Protease propeptides/inhibitors | 0 | Direct |
| Ferritin-like | 0 | Direct |
| PreATP-grasp domain | 0 | Direct |
| F1F0 ATP synthase subunit C | 0 | Direct |
| Cullin repeat-like | 0 | Direct |
| Formate/glycerate dehydrogenase catalytic domain-like | 0 | Direct |
| Ribosomal protein L22 | 0 | Direct |
| The spindle assembly checkpoint protein mad2 | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| eIF1-like | 0 | Direct |
| Riboflavin synthase domain-like | 0 | Direct |
| S13-like H2TH domain | 0 | Direct |
| Nucleoporin domain | 0 | Direct |
| HIT/MYND zinc finger-like | 0 | Direct |
| ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | Direct |
| Cation efflux protein transmembrane domain-like | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | Direct |
| Restriction endonuclease-like | 0 | Direct |
| KA1-like | 0 | Direct |
| Radical SAM enzymes | 0 | Direct |
| ThrRS/AlaRS common domain | 0 | Direct |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
| YAP1 redox domain | 0 | Direct |
| Rhomboid-like | 0 | Direct |
| EPT/RTPC-like | 0 | Direct |
| Phosphoglycerate mutase-like | 0 | Direct |
| PEBP-like | 0 | Direct |
| Concanavalin A-like lectins/glucanases | 0 | Direct |
| HRDC-like | 0 | Direct |
| NagB/RpiA/CoA transferase-like | 0 | Direct |
| Cullin homology domain | 0 | Direct |
| GST C-terminal domain-like | 0 | Direct |
| FMN-binding split barrel | 0 | Direct |
| Carbohydrate phosphatase | 0 | Direct |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
| FabD/lysophospholipase-like | 0 | Direct |
| L-aspartase-like | 0 | Direct |
| Aminoacid dehydrogenase-like, N-terminal domain | 0 | Direct |
| Seven-hairpin glycosidases | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| DNase I-like | 0 | Direct |
| Ferredoxin reductase-like, C-terminal NADP-linked domain | 0 | Direct |
| Aldolase | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| Clathrin adaptor appendage domain | 0 | Direct |
| Chromo domain-like | 0 | Direct |
| LDH C-terminal domain-like | 0 | Direct |
| Carbamate kinase-like | 0 | Direct |
| ACT-like | 0 | Direct |
| FAD-linked oxidases, C-terminal domain | 0 | Direct |
| R3H domain | 0 | Direct |
| ValRS/IleRS/LeuRS editing domain | 0 | Direct |
| Translational machinery components | 0 | Direct |
| E set domains | 0 | Direct |
| SAP domain | 0 | Direct |
| Citrate synthase | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| PLP-binding barrel | 0 | Direct |
| Tubulin C-terminal domain-like | 0 | Direct |
| Nucleotide-binding domain | 0 | Direct |
| Rudiment single hybrid motif | 0 | Direct |
| Protein prenylyltransferase | 0 | Direct |
| LexA/Signal peptidase | 0 | Direct |
| PX domain | 0 | Direct |
| ALDH-like | 0 | Direct |
| GHMP Kinase, C-terminal domain | 0 | Direct |
| Activating enzymes of the ubiquitin-like proteins | 0 | Direct |
| tRNA-intron endonuclease catalytic domain-like | 0 | Direct |
| WW domain | 0 | Direct |
| PP2C-like | 0 | Direct |
| DNA-glycosylase | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| FKBP-like | 0 | Direct |
| Cupredoxins | 0 | Direct |
| HLH, helix-loop-helix DNA-binding domain | 0 | Direct |
| Endosomal sorting complex assembly domain | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| Phosphoenolpyruvate/pyruvate domain | 0 | Direct |
| HMA, heavy metal-associated domain | 0 | Direct |
| DNA repair protein MutS, domain I | 0 | Direct |
| Amidase signature (AS) enzymes | 0 | Direct |
| PA domain | 0 | Direct |
| (Phosphotyrosine protein) phosphatases II | 0 | Direct |
| Cap-Gly domain | 0 | Direct |
| Rhodanese/Cell cycle control phosphatase | 0 | Direct |
| Trimeric LpxA-like enzymes | 0 | Direct |
| Cytochrome P450 | 0 | Direct |
| ClpP/crotonase | 0 | Direct |
| Glutamine synthetase/guanido kinase | 0 | Direct |
| Acid proteases | 0 | Direct |
| Acyl-CoA N-acyltransferases (Nat) | 0 | Direct |
| GroEL apical domain-like | 0 | Direct |
| Cytochrome b5-like heme/steroid binding domain | 0 | Direct |
| GTPase activation domain, GAP | 0 | Direct |
| Regulator of G-protein signaling, RGS | 0 | Direct |
| VPS9 domain | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| GYF domain | 0 | Direct |
| SAICAR synthase-like | 0 | Direct |
| CRAL/TRIO N-terminal domain | 0 | Direct |
| PIN domain-like | 0 | Direct |
| LeuD/IlvD-like | 0 | Direct |
| Thiolase-like | 0 | Direct |
| Ubiquitin-like | 0 | Direct |
| EF-G C-terminal domain-like | 0 | Direct |
| DNA repair protein MutS, domain II | 0 | Direct |
| Kelch motif | 0 | Direct |
| DNA ligase/mRNA capping enzyme, catalytic domain | 0 | Direct |
| Ras GEF | 0 | Direct |
| Ribosomal protein S8 | 0 | Direct |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| HMG-box | 0 | Direct |
| CRAL/TRIO domain | 0 | Direct |
| Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0 | Direct |
| MurD-like peptide ligases, peptide-binding domain | 0 | Direct |
| Prefoldin | 0 | Direct |
| DPP6 N-terminal domain-like | 0 | Direct |
| beta-beta-alpha zinc fingers | 0 | Direct |
| CCCH zinc finger | 0 | Direct |
| Actin depolymerizing proteins | 0 | Direct |
| Ribokinase-like | 0 | Direct |
| F-box domain | 0 | Direct |
| MurD-like peptide ligases, catalytic domain | 0 | Direct |
| ArfGap/RecO-like zinc finger | 0 | Direct |
| Galactose-binding domain-like | 0 | Direct |
| Glycerol-3-phosphate (1)-acyltransferase | 0 | Direct |
| GroEL equatorial domain-like | 0 | Direct |
| Tricorn protease domain 2 | 0 | Direct |
| FAD-binding/transporter-associated domain-like | 0 | Direct |
| Nop domain | 0 | Direct |
| Subtilisin-like | 0 | Direct |
| Transferrin receptor-like dimerisation domain | 0 | Direct |
| Oligoxyloglucan reducing end-specific cellobiohydrolase | 0 | Direct |
| NAD kinase/diacylglycerol kinase-like | 0 | Direct |
| HSP20-like chaperones | 0 | Direct |
| Pseudouridine synthase | 0 | Direct |
| RCC1/BLIP-II | 0 | Direct |
| Nucleotidyltransferase | 0 | Direct |
| Zinc beta-ribbon | 0 | Direct |
| BAR/IMD domain-like | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| Metallo-dependent hydrolases | 0 | Direct |
| DNA repair protein MutS, domain III | 0 | Direct |
| RNI-like | 0 | Direct |
| Aquaporin-like | 0 | Direct |
| Multidrug resistance efflux transporter EmrE | 0 | Direct |
| Ammonium transporter | 0 | Direct |
| Mss4-like | 0 | Direct |
| Nucleotide-diphospho-sugar transferases | 0 | Direct |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | Direct |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| Methylglyoxal synthase-like | 0 | Direct |
| Thioesterase/thiol ester dehydrase-isomerase | 0 | Direct |
| CorA soluble domain-like | 0 | Direct |
| Homo-oligomeric flavin-containing Cys decarboxylases, HFCD | 0 | Direct |
| Smc hinge domain | 0 | Direct |
| t-snare proteins | 0 | Direct |
| post-HMGL domain-like | 0 | Direct |
| Glutathione synthetase ATP-binding domain-like | 0 | Direct |
| Tubulin nucleotide-binding domain-like | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| CheY-like | 0 | Direct |
| post-AAA+ oligomerization domain-like | 0 | Direct |
| PAP/OAS1 substrate-binding domain | 0 | Direct |
| Ypt/Rab-GAP domain of gyp1p | 0 | Direct |
| Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
| Phospholipase D/nuclease | 0 | Direct |
| DNA-binding domain of Mlu1-box binding protein MBP1 | 0 | Direct |
| FtsH protease domain-like | 0 | Direct |
| Calponin-homology domain, CH-domain | 0 | Direct |
| HSP40/DnaJ peptide-binding domain | 0 | Direct |
| Galactose mutarotase-like | 0 | Direct |
| Creatinase/prolidase N-terminal domain | 0 | Direct |
| 4'-phosphopantetheinyl transferase | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| Sec1/munc18-like (SM) proteins | 0 | Direct |
| L domain-like | 0 | Direct |
| SpoIIaa-like | 0 | Direct |
| Nudix | 0 | Direct |
| RmlC-like cupins | 0 | Direct |
| GroEL-intermediate domain like | 0 | Direct |
| PR-1-like | 0 | Direct |
| Sec63 N-terminal domain-like | 0 | Direct |
| Clavaminate synthase-like | 0 | Direct |
| Hect, E3 ligase catalytic domain | 0 | Direct |
| DnaJ/Hsp40 cysteine-rich domain | 0 | Direct |
| Family A G protein-coupled receptor-like | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| Single hybrid motif | 0 | Direct |
| GAT-like domain | 0 | Direct |
| SRF-like | 0 | Direct |
| Cytochrome c | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Mitochondrial cytochrome c oxidase subunit IV | 0 | Direct |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | Direct |
| Sialidases | 0 | Direct |
| Ribosomal protein L6 | 0 | Direct |
| Alpha-L RNA-binding motif | 0 | Direct |
| PH domain-like | 0 | Direct |
| PYP-like sensor domain (PAS domain) | 0 | Direct |
| Zinc domain conserved in yeast copper-regulated transcription factors | 0 | Direct |
| Alkaline phosphatase-like | 0 | Direct |
| PLC-like phosphodiesterases | 0 | Direct |
| Six-hairpin glycosidases | 0 | Direct |
LINKTO: Domain2BO Download and Domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Family( show details)
Highlighted in gray are those with FDR_all>0.001
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| eIF1-like | 0 | DIRECT |
| MIF4G domain-like | 0 | DIRECT |
| DNA ligase/mRNA capping enzyme postcatalytic domain | 0 | DIRECT |
| N-acetyl transferase, NAT | 0 | DIRECT |
| Inositol polyphosphate 5-phosphatase (IPP5) | 0 | DIRECT |
| Erythroid transcription factor GATA-1 | 0 | DIRECT |
| PyrH-like | 0 | DIRECT |
| TRAPP components | 0 | DIRECT |
| RecA protein-like (ATPase-domain) | 0 | DIRECT |
| Citrate synthase | 0 | DIRECT |
| Glucose 6-phosphate dehydrogenase-like | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| FAD-linked oxidases, N-terminal domain | 0 | DIRECT |
| beta-glycanases | 0 | DIRECT |
| Transcriptional factor domain | 0 | DIRECT |
| CRAL/TRIO N-terminal domain | 0 | DIRECT |
| FKBP immunophilin/proline isomerase | 0 | DIRECT |
| Inositol monophosphatase/fructose-1,6-bisphosphatase-like | 0 | DIRECT |
| Serine carboxypeptidase-like | 0 | DIRECT |
| Aminoacid dehydrogenases | 0 | DIRECT |
| Ferredoxin reductase FAD-binding domain-like | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | DIRECT |
| 5' to 3' exonuclease catalytic domain | 0 | DIRECT |
| FCH domain | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| Cofilin-like | 0 | DIRECT |
| HCP-like | 0 | DIRECT |
| TENA/THI-4 | 0 | DIRECT |
| Class I glutamine amidotransferases (GAT) | 0 | DIRECT |
| Glutathione peroxidase-like | 0 | DIRECT |
| Cation efflux protein transmembrane domain-like | 0 | DIRECT |
| LDH N-terminal domain-like | 0 | DIRECT |
| Hexokinase | 0 | DIRECT |
| RNA-polymerase beta-prime | 0 | DIRECT |
| RNB domain-like | 0 | DIRECT |
| Glycosyl hydrolases family 16 | 0 | DIRECT |
| Amidase signature (AS) enzymes | 0 | DIRECT |
| Heat-shock transcription factor | 0 | DIRECT |
| Glycolipid 2-alpha-mannosyltransferase | 0 | DIRECT |
| Pleckstrin-homology domain (PH domain) | 0 | DIRECT |
| CRAL/TRIO domain | 0 | DIRECT |
| BC ATP-binding domain-like | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| NagB-like | 0 | DIRECT |
| SCF ubiquitin ligase complex WHB domain | 0 | DIRECT |
| Ypt/Rab-GAP domain of gyp1p | 0 | DIRECT |
| CheY-related | 0 | DIRECT |
| Higher-molecular-weight phosphotyrosine protein phosphatases | 0 | DIRECT |
| HMGL-like | 0 | DIRECT |
| p120GAP domain-like | 0 | DIRECT |
| Smc hinge domain | 0 | DIRECT |
| Adenosine/AMP deaminase | 0 | DIRECT |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| Pseudouridine synthase I TruA | 0 | DIRECT |
| Crotonase-like | 0 | DIRECT |
| FMN-linked oxidoreductases | 0 | DIRECT |
| Formate/glycerate dehydrogenases, NAD-domain | 0 | DIRECT |
| Translational machinery components | 0 | DIRECT |
| Ribosomal protein S8 | 0 | DIRECT |
| Lysophospholipase | 0 | DIRECT |
| RING finger domain, C3HC4 | 0 | DIRECT |
| CCCH zinc finger | 0 | DIRECT |
| Subtilase propeptides/inhibitors | 0 | DIRECT |
| HLH, helix-loop-helix DNA-binding domain | 0 | DIRECT |
| Multidomain cupredoxins | 0 | DIRECT |
| DNA gyrase/MutL, N-terminal domain | 0 | DIRECT |
| Cyclin | 0 | DIRECT |
| Zinc domain conserved in yeast copper-regulated transcription factors | 0 | DIRECT |
| Thiamin biosynthesis kinases | 0 | DIRECT |
| Class I aldolase | 0 | DIRECT |
| PA domain | 0 | DIRECT |
| Tetratricopeptide repeat (TPR) | 0 | DIRECT |
| NADPH-cytochrome p450 reductase FAD-binding domain-like | 0 | DIRECT |
| DNA polymerase I | 0 | DIRECT |
| FabD-like | 0 | DIRECT |
| Pyk2-associated protein beta ARF-GAP domain | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| NADPH-cytochrome p450 reductase-like | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), intermediate domain | 0 | DIRECT |
| Ankyrin repeat | 0 | DIRECT |
| Clathrin coat assembly domain | 0 | DIRECT |
| VHS domain | 0 | DIRECT |
| DNA repair protein MutS, domain I | 0 | DIRECT |
| C-terminal domain of ribosomal protein L2 | 0 | DIRECT |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | DIRECT |
| Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0 | DIRECT |
| IF2B-like | 0 | DIRECT |
| Classic zinc finger, C2H2 | 0 | DIRECT |
| VPS9 domain | 0 | DIRECT |
| Sec1/munc18-like (SM) proteins | 0 | DIRECT |
| Glutathione S-transferase (GST), N-terminal domain | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| SAP domain | 0 | DIRECT |
| t-snare proteins | 0 | DIRECT |
| Aquaporin-like | 0 | DIRECT |
| Dual specificity phosphatase-like | 0 | DIRECT |
| Hect, E3 ligase catalytic domain | 0 | DIRECT |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain | 0 | DIRECT |
| Cofactor-dependent phosphoglycerate mutase | 0 | DIRECT |
| Class I aminoacyl-tRNA synthetases (RS), catalytic domain | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| Cyclophilin (peptidylprolyl isomerase) | 0 | DIRECT |
| 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain | 0 | DIRECT |
| Eps15 homology domain (EH domain) | 0 | DIRECT |
| Ribosomal protein L6 | 0 | DIRECT |
| Cytochrome P450 | 0 | DIRECT |
| HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
| Single strand DNA-binding domain, SSB | 0 | DIRECT |
| Subtilases | 0 | DIRECT |
| FtsH protease domain-like | 0 | DIRECT |
| Cytochrome p450 reductase N-terminal domain-like | 0 | DIRECT |
| CorA soluble domain-like | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain | 0 | DIRECT |
| Trehalose-6-phosphate synthase, OtsA | 0 | DIRECT |
| Biotinyl/lipoyl-carrier proteins and domains | 0 | DIRECT |
| Ubiquitin activating enzymes (UBA) | 0 | DIRECT |
| PR-1-like | 0 | DIRECT |
| Prefoldin | 0 | DIRECT |
| TBP-associated factors, TAFs | 0 | DIRECT |
| Cytochrome b5 | 0 | DIRECT |
| Leukotriene A4 hydrolase catalytic domain | 0 | DIRECT |
| Chaperone J-domain | 0 | DIRECT |
| Calponin-homology domain, CH-domain | 0 | DIRECT |
| YjgF/L-PSP | 0 | DIRECT |
| BC N-terminal domain-like | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| PDI-like | 0 | DIRECT |
| Ribosomal protein S13 | 0 | DIRECT |
| Ammonium transporter | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| Ribokinase-like | 0 | DIRECT |
| Ubiquitin-related | 0 | DIRECT |
| Histidine acid phosphatase | 0 | DIRECT |
| Bacteriorhodopsin-like | 0 | DIRECT |
| F1F0 ATP synthase subunit C | 0 | DIRECT |
| AMPK-beta glycogen binding domain-like | 0 | DIRECT |
| Formate/glycerate dehydrogenases, substrate-binding domain | 0 | DIRECT |
| DNA gyrase/MutL, second domain | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| AAT-like | 0 | DIRECT |
| ALDH-like | 0 | DIRECT |
| GHMP Kinase, N-terminal domain | 0 | DIRECT |
| HMA, heavy metal-associated domain | 0 | DIRECT |
| Clathrin adaptor core protein | 0 | DIRECT |
| La domain | 0 | DIRECT |
| SWIRM domain | 0 | DIRECT |
| Myb/SANT domain | 0 | DIRECT |
| XPF/Rad1/Mus81 nuclease | 0 | DIRECT |
| Transferrin receptor-like dimerisation domain | 0 | DIRECT |
| Folylpolyglutamate synthetase | 0 | DIRECT |
| DnaJ/Hsp40 cysteine-rich domain | 0 | DIRECT |
| ValRS/IleRS/LeuRS editing domain | 0 | DIRECT |
| NAD kinase-like | 0 | DIRECT |
| F-box domain | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), ATPase domain | 0 | DIRECT |
| L-aspartase/fumarase | 0 | DIRECT |
| Class I alpha-1;2-mannosidase, catalytic domain | 0 | DIRECT |
| PP2C-like | 0 | DIRECT |
| Tetrahydrofolate dehydrogenase/cyclohydrolase | 0 | DIRECT |
| Thiolase-related | 0 | DIRECT |
| tRNA-intron endonuclease catalytic domain-like | 0 | DIRECT |
| FYVE, a phosphatidylinositol-3-phosphate binding domain | 0 | DIRECT |
| WW domain | 0 | DIRECT |
| DnaQ-like 3'-5' exonuclease | 0 | DIRECT |
| DNA polymerase III clamp loader subunits, C-terminal domain | 0 | DIRECT |
| PX domain | 0 | DIRECT |
| HMG-box | 0 | DIRECT |
| Regulator of G-protein signaling, RGS | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| Ribosomal protein S4 | 0 | DIRECT |
| Cullin homology domain | 0 | DIRECT |
| UBA domain | 0 | DIRECT |
| Pseudouridine synthase RsuA/RluD | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), apical domain | 0 | DIRECT |
| Phosphoribulokinase/pantothenate kinase | 0 | DIRECT |
| ENTH domain | 0 | DIRECT |
| Forkhead DNA-binding domain | 0 | DIRECT |
| GAPDH-like | 0 | DIRECT |
| EF-G/eEF-2 domains III and V | 0 | DIRECT |
| GYF domain | 0 | DIRECT |
| Vacuolar sorting protein domain | 0 | DIRECT |
| Glutathione S-transferase (GST), C-terminal domain | 0 | DIRECT |
| Ribosomal protein L18 and S11 | 0 | DIRECT |
| Ras GEF | 0 | DIRECT |
| Glycosyl transferases group 1 | 0 | DIRECT |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
| Tryptophan biosynthesis enzymes | 0 | DIRECT |
| Homo-oligomeric flavin-containing Cys decarboxylases, HFCD | 0 | DIRECT |
| Cap-Gly domain | 0 | DIRECT |
| Lactate & malate dehydrogenases, C-terminal domain | 0 | DIRECT |
| YAP1 redox domain | 0 | DIRECT |
| Aminoacid dehydrogenase-like, C-terminal domain | 0 | DIRECT |
| FAD-linked reductases, N-terminal domain | 0 | DIRECT |
| LeuD-like | 0 | DIRECT |
| BCR-homology GTPase activation domain (BH-domain) | 0 | DIRECT |
| SRF-like | 0 | DIRECT |
| Ran-binding domain | 0 | DIRECT |
| Ribosomal protein L22 | 0 | DIRECT |
| Nucleosome core histones | 0 | DIRECT |
| Phosphate binding protein-like | 0 | DIRECT |
| Pepsin-like | 0 | DIRECT |
| Choline/Carnitine O-acyltransferase | 0 | DIRECT |
| Deoxycytidylate deaminase-like | 0 | DIRECT |
| BC C-terminal domain-like | 0 | DIRECT |
| Reductases | 0 | DIRECT |
| NLI interacting factor-like phosphatase | 0 | DIRECT |
| DNA repair protein MutS, domain III | 0 | DIRECT |
| DNA-binding domain of Mlu1-box binding protein MBP1 | 0 | DIRECT |
| Gastric lipase | 0 | DIRECT |
| RuBisCo LSMT catalytic domain | 0 | DIRECT |
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| eIF1-like | 0 | Direct |
| MIF4G domain-like | 0 | Direct |
| DNA ligase/mRNA capping enzyme postcatalytic domain | 0 | Direct |
| N-acetyl transferase, NAT | 0 | Direct |
| Inositol polyphosphate 5-phosphatase (IPP5) | 0 | Direct |
| Erythroid transcription factor GATA-1 | 0 | Direct |
| PyrH-like | 0 | Direct |
| TRAPP components | 0 | Direct |
| RecA protein-like (ATPase-domain) | 0 | Direct |
| Citrate synthase | 0 | Direct |
| Glucose 6-phosphate dehydrogenase-like | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| FAD-linked oxidases, N-terminal domain | 0 | Direct |
| beta-glycanases | 0 | Direct |
| Transcriptional factor domain | 0 | Direct |
| CRAL/TRIO N-terminal domain | 0 | Direct |
| FKBP immunophilin/proline isomerase | 0 | Direct |
| Inositol monophosphatase/fructose-1,6-bisphosphatase-like | 0 | Direct |
| Serine carboxypeptidase-like | 0 | Direct |
| Aminoacid dehydrogenases | 0 | Direct |
| Ferredoxin reductase FAD-binding domain-like | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | Direct |
| 5' to 3' exonuclease catalytic domain | 0 | Direct |
| FCH domain | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| Cofilin-like | 0 | Direct |
| HCP-like | 0 | Direct |
| TENA/THI-4 | 0 | Direct |
| Class I glutamine amidotransferases (GAT) | 0 | Direct |
| Glutathione peroxidase-like | 0 | Direct |
| Cation efflux protein transmembrane domain-like | 0 | Direct |
| LDH N-terminal domain-like | 0 | Direct |
| Hexokinase | 0 | Direct |
| RNA-polymerase beta-prime | 0 | Direct |
| RNB domain-like | 0 | Direct |
| Glycosyl hydrolases family 16 | 0 | Direct |
| Amidase signature (AS) enzymes | 0 | Direct |
| Heat-shock transcription factor | 0 | Direct |
| Glycolipid 2-alpha-mannosyltransferase | 0 | Direct |
| Pleckstrin-homology domain (PH domain) | 0 | Direct |
| CRAL/TRIO domain | 0 | Direct |
| BC ATP-binding domain-like | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| NagB-like | 0 | Direct |
| SCF ubiquitin ligase complex WHB domain | 0 | Direct |
| Ypt/Rab-GAP domain of gyp1p | 0 | Direct |
| CheY-related | 0 | Direct |
| Higher-molecular-weight phosphotyrosine protein phosphatases | 0 | Direct |
| HMGL-like | 0 | Direct |
| p120GAP domain-like | 0 | Direct |
| Smc hinge domain | 0 | Direct |
| Adenosine/AMP deaminase | 0 | Direct |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| Pseudouridine synthase I TruA | 0 | Direct |
| Crotonase-like | 0 | Direct |
| FMN-linked oxidoreductases | 0 | Direct |
| Formate/glycerate dehydrogenases, NAD-domain | 0 | Direct |
| Translational machinery components | 0 | Direct |
| Ribosomal protein S8 | 0 | Direct |
| Lysophospholipase | 0 | Direct |
| RING finger domain, C3HC4 | 0 | Direct |
| CCCH zinc finger | 0 | Direct |
| Subtilase propeptides/inhibitors | 0 | Direct |
| HLH, helix-loop-helix DNA-binding domain | 0 | Direct |
| Multidomain cupredoxins | 0 | Direct |
| DNA gyrase/MutL, N-terminal domain | 0 | Direct |
| Cyclin | 0 | Direct |
| Zinc domain conserved in yeast copper-regulated transcription factors | 0 | Direct |
| Thiamin biosynthesis kinases | 0 | Direct |
| Class I aldolase | 0 | Direct |
| PA domain | 0 | Direct |
| Tetratricopeptide repeat (TPR) | 0 | Direct |
| NADPH-cytochrome p450 reductase FAD-binding domain-like | 0 | Direct |
| DNA polymerase I | 0 | Direct |
| FabD-like | 0 | Direct |
| Pyk2-associated protein beta ARF-GAP domain | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| NADPH-cytochrome p450 reductase-like | 0 | Direct |
| Group II chaperonin (CCT, TRIC), intermediate domain | 0 | Direct |
| Ankyrin repeat | 0 | Direct |
| Clathrin coat assembly domain | 0 | Direct |
| VHS domain | 0 | Direct |
| DNA repair protein MutS, domain I | 0 | Direct |
| C-terminal domain of ribosomal protein L2 | 0 | Direct |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | Direct |
| Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0 | Direct |
| IF2B-like | 0 | Direct |
| Classic zinc finger, C2H2 | 0 | Direct |
| VPS9 domain | 0 | Direct |
| Sec1/munc18-like (SM) proteins | 0 | Direct |
| Glutathione S-transferase (GST), N-terminal domain | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| SH3-domain | 0 | Direct |
| SAP domain | 0 | Direct |
| t-snare proteins | 0 | Direct |
| Aquaporin-like | 0 | Direct |
| Dual specificity phosphatase-like | 0 | Direct |
| Hect, E3 ligase catalytic domain | 0 | Direct |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain | 0 | Direct |
| Cofactor-dependent phosphoglycerate mutase | 0 | Direct |
| Class I aminoacyl-tRNA synthetases (RS), catalytic domain | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| Cyclophilin (peptidylprolyl isomerase) | 0 | Direct |
| 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain | 0 | Direct |
| Eps15 homology domain (EH domain) | 0 | Direct |
| Ribosomal protein L6 | 0 | Direct |
| Cytochrome P450 | 0 | Direct |
| HSP40/DnaJ peptide-binding domain | 0 | Direct |
| Single strand DNA-binding domain, SSB | 0 | Direct |
| Subtilases | 0 | Direct |
| FtsH protease domain-like | 0 | Direct |
| Cytochrome p450 reductase N-terminal domain-like | 0 | Direct |
| CorA soluble domain-like | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain | 0 | Direct |
| Trehalose-6-phosphate synthase, OtsA | 0 | Direct |
| Biotinyl/lipoyl-carrier proteins and domains | 0 | Direct |
| Ubiquitin activating enzymes (UBA) | 0 | Direct |
| PR-1-like | 0 | Direct |
| Prefoldin | 0 | Direct |
| TBP-associated factors, TAFs | 0 | Direct |
| Cytochrome b5 | 0 | Direct |
| Leukotriene A4 hydrolase catalytic domain | 0 | Direct |
| Chaperone J-domain | 0 | Direct |
| Calponin-homology domain, CH-domain | 0 | Direct |
| YjgF/L-PSP | 0 | Direct |
| BC N-terminal domain-like | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| PDI-like | 0 | Direct |
| Ribosomal protein S13 | 0 | Direct |
| Ammonium transporter | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| Ribokinase-like | 0 | Direct |
| Ubiquitin-related | 0 | Direct |
| Histidine acid phosphatase | 0 | Direct |
| Bacteriorhodopsin-like | 0 | Direct |
| F1F0 ATP synthase subunit C | 0 | Direct |
| AMPK-beta glycogen binding domain-like | 0 | Direct |
| Formate/glycerate dehydrogenases, substrate-binding domain | 0 | Direct |
| DNA gyrase/MutL, second domain | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| AAT-like | 0 | Direct |
| ALDH-like | 0 | Direct |
| GHMP Kinase, N-terminal domain | 0 | Direct |
| HMA, heavy metal-associated domain | 0 | Direct |
| Clathrin adaptor core protein | 0 | Direct |
| La domain | 0 | Direct |
| SWIRM domain | 0 | Direct |
| Myb/SANT domain | 0 | Direct |
| XPF/Rad1/Mus81 nuclease | 0 | Direct |
| Transferrin receptor-like dimerisation domain | 0 | Direct |
| Folylpolyglutamate synthetase | 0 | Direct |
| DnaJ/Hsp40 cysteine-rich domain | 0 | Direct |
| ValRS/IleRS/LeuRS editing domain | 0 | Direct |
| NAD kinase-like | 0 | Direct |
| F-box domain | 0 | Direct |
| Group II chaperonin (CCT, TRIC), ATPase domain | 0 | Direct |
| L-aspartase/fumarase | 0 | Direct |
| Class I alpha-1;2-mannosidase, catalytic domain | 0 | Direct |
| PP2C-like | 0 | Direct |
| Tetrahydrofolate dehydrogenase/cyclohydrolase | 0 | Direct |
| Thiolase-related | 0 | Direct |
| tRNA-intron endonuclease catalytic domain-like | 0 | Direct |
| FYVE, a phosphatidylinositol-3-phosphate binding domain | 0 | Direct |
| WW domain | 0 | Direct |
| DnaQ-like 3'-5' exonuclease | 0 | Direct |
| DNA polymerase III clamp loader subunits, C-terminal domain | 0 | Direct |
| PX domain | 0 | Direct |
| HMG-box | 0 | Direct |
| Regulator of G-protein signaling, RGS | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| Ribosomal protein S4 | 0 | Direct |
| Cullin homology domain | 0 | Direct |
| UBA domain | 0 | Direct |
| Pseudouridine synthase RsuA/RluD | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain | 0 | Direct |
| Group II chaperonin (CCT, TRIC), apical domain | 0 | Direct |
| Phosphoribulokinase/pantothenate kinase | 0 | Direct |
| ENTH domain | 0 | Direct |
| Forkhead DNA-binding domain | 0 | Direct |
| GAPDH-like | 0 | Direct |
| EF-G/eEF-2 domains III and V | 0 | Direct |
| GYF domain | 0 | Direct |
| Vacuolar sorting protein domain | 0 | Direct |
| Glutathione S-transferase (GST), C-terminal domain | 0 | Direct |
| Ribosomal protein L18 and S11 | 0 | Direct |
| Ras GEF | 0 | Direct |
| Glycosyl transferases group 1 | 0 | Direct |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
| Tryptophan biosynthesis enzymes | 0 | Direct |
| Homo-oligomeric flavin-containing Cys decarboxylases, HFCD | 0 | Direct |
| Cap-Gly domain | 0 | Direct |
| Lactate & malate dehydrogenases, C-terminal domain | 0 | Direct |
| YAP1 redox domain | 0 | Direct |
| Aminoacid dehydrogenase-like, C-terminal domain | 0 | Direct |
| FAD-linked reductases, N-terminal domain | 0 | Direct |
| LeuD-like | 0 | Direct |
| BCR-homology GTPase activation domain (BH-domain) | 0 | Direct |
| SRF-like | 0 | Direct |
| Ran-binding domain | 0 | Direct |
| Ribosomal protein L22 | 0 | Direct |
| Nucleosome core histones | 0 | Direct |
| Phosphate binding protein-like | 0 | Direct |
| Pepsin-like | 0 | Direct |
| Choline/Carnitine O-acyltransferase | 0 | Direct |
| Deoxycytidylate deaminase-like | 0 | Direct |
| BC C-terminal domain-like | 0 | Direct |
| Reductases | 0 | Direct |
| NLI interacting factor-like phosphatase | 0 | Direct |
| DNA repair protein MutS, domain III | 0 | Direct |
| DNA-binding domain of Mlu1-box binding protein MBP1 | 0 | Direct |
| Gastric lipase | 0 | Direct |
| RuBisCo LSMT catalytic domain | 0 | Direct |
LINKTO: Domain2BO Download and Domain2BO Algorithm
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Supra-domain (Single)( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| Amidase signature (AS) enzymes | 0 | DIRECT |
| Actin depolymerizing proteins | 0 | DIRECT |
| Tubulin nucleotide-binding domain-like | 0 | DIRECT |
| Carbamate kinase-like | 0 | DIRECT |
| Cytochrome P450 | 0 | DIRECT |
| LexA/Signal peptidase | 0 | DIRECT |
| FKBP-like | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| PA domain | 0 | DIRECT |
| Mitochondrial cytochrome c oxidase subunit IV | 0 | DIRECT |
| post-AAA+ oligomerization domain-like | 0 | DIRECT |
| Seven-hairpin glycosidases | 0 | DIRECT |
| PAP/OAS1 substrate-binding domain | 0 | DIRECT |
| Translational machinery components | 0 | DIRECT |
| (Phosphotyrosine protein) phosphatases II | 0 | DIRECT |
| DNA-glycosylase | 0 | DIRECT |
| Aldolase | 0 | DIRECT |
| PLP-binding barrel | 0 | DIRECT |
| EPT/RTPC-like | 0 | DIRECT |
| L domain-like | 0 | DIRECT |
| CRAL/TRIO N-terminal domain | 0 | DIRECT |
| GYF domain | 0 | DIRECT |
| CorA soluble domain-like | 0 | DIRECT |
| beta-beta-alpha zinc fingers | 0 | DIRECT |
| Ribosomal protein L22 | 0 | DIRECT |
| Sec63 N-terminal domain-like | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| Nucleotide-diphospho-sugar transferases | 0 | DIRECT |
| ALDH-like | 0 | DIRECT |
| Zinc domain conserved in yeast copper-regulated transcription factors | 0 | DIRECT |
| Multidrug resistance efflux transporter EmrE | 0 | DIRECT |
| CRAL/TRIO domain | 0 | DIRECT |
| YjgF-like | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| Nudix | 0 | DIRECT |
| HSP20-like chaperones | 0 | DIRECT |
| Smc hinge domain | 0 | DIRECT |
| LDH C-terminal domain-like | 0 | DIRECT |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
| Radical SAM enzymes | 0 | DIRECT |
| Glutamine synthetase/guanido kinase | 0 | DIRECT |
| Cupredoxins | 0 | DIRECT |
| Trimeric LpxA-like enzymes | 0 | DIRECT |
| Phosphoenolpyruvate/pyruvate domain | 0 | DIRECT |
| Zinc beta-ribbon | 0 | DIRECT |
| PP2C-like | 0 | DIRECT |
| KA1-like | 0 | DIRECT |
| TGS-like | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| FMN-binding split barrel | 0 | DIRECT |
| Citrate synthase | 0 | DIRECT |
| PR-1-like | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| Transferrin receptor-like dimerisation domain | 0 | DIRECT |
| DNA repair protein MutS, domain I | 0 | DIRECT |
| Concanavalin A-like lectins/glucanases | 0 | DIRECT |
| Activating enzymes of the ubiquitin-like proteins | 0 | DIRECT |
| Tubulin C-terminal domain-like | 0 | DIRECT |
| tRNA-intron endonuclease catalytic domain-like | 0 | DIRECT |
| FabD/lysophospholipase-like | 0 | DIRECT |
| SAP domain | 0 | DIRECT |
| Acyl-CoA N-acyltransferases (Nat) | 0 | DIRECT |
| ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | DIRECT |
| Clavaminate synthase-like | 0 | DIRECT |
| Methylglyoxal synthase-like | 0 | DIRECT |
| RmlC-like cupins | 0 | DIRECT |
| The spindle assembly checkpoint protein mad2 | 0 | DIRECT |
| NagB/RpiA/CoA transferase-like | 0 | DIRECT |
| Aquaporin-like | 0 | DIRECT |
| Nucleotide-binding domain | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| HMG-box | 0 | DIRECT |
| DNase I-like | 0 | DIRECT |
| F1F0 ATP synthase subunit C | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| RBP11-like subunits of RNA polymerase | 0 | DIRECT |
| Glutathione synthetase ATP-binding domain-like | 0 | DIRECT |
| Ferritin-like | 0 | DIRECT |
| Galactose mutarotase-like | 0 | DIRECT |
| Rhomboid-like | 0 | DIRECT |
| HRDC-like | 0 | DIRECT |
| Creatinase/prolidase N-terminal domain | 0 | DIRECT |
| PYP-like sensor domain (PAS domain) | 0 | DIRECT |
| Clathrin adaptor appendage domain | 0 | DIRECT |
| ThrRS/AlaRS common domain | 0 | DIRECT |
| ACT-like | 0 | DIRECT |
| post-HMGL domain-like | 0 | DIRECT |
| t-snare proteins | 0 | DIRECT |
| MurD-like peptide ligases, peptide-binding domain | 0 | DIRECT |
| HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | DIRECT |
| Restriction endonuclease-like | 0 | DIRECT |
| ArfGap/RecO-like zinc finger | 0 | DIRECT |
| Calponin-homology domain, CH-domain | 0 | DIRECT |
| Heme oxygenase-like | 0 | DIRECT |
| Cyclophilin-like | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| FtsH protease domain-like | 0 | DIRECT |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
| PEBP-like | 0 | DIRECT |
| DPP6 N-terminal domain-like | 0 | DIRECT |
| ValRS/IleRS/LeuRS editing domain | 0 | DIRECT |
| HIT/MYND zinc finger-like | 0 | DIRECT |
| Alkaline phosphatase-like | 0 | DIRECT |
| PH domain-like | 0 | DIRECT |
| Hect, E3 ligase catalytic domain | 0 | DIRECT |
| L-aspartase-like | 0 | DIRECT |
| Rhodanese/Cell cycle control phosphatase | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| DNA repair protein MutS, domain II | 0 | DIRECT |
| HLH, helix-loop-helix DNA-binding domain | 0 | DIRECT |
| Ribokinase-like | 0 | DIRECT |
| PX domain | 0 | DIRECT |
| SAICAR synthase-like | 0 | DIRECT |
| Nop domain | 0 | DIRECT |
| Acid proteases | 0 | DIRECT |
| Ankyrin repeat | 0 | DIRECT |
| FAD-binding/transporter-associated domain-like | 0 | DIRECT |
| Sec1/munc18-like (SM) proteins | 0 | DIRECT |
| MurD-like peptide ligases, catalytic domain | 0 | DIRECT |
| Carbohydrate phosphatase | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| Subtilisin-like | 0 | DIRECT |
| Phospholipase D/nuclease | 0 | DIRECT |
| Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
| LeuD/IlvD-like | 0 | DIRECT |
| PLC-like phosphodiesterases | 0 | DIRECT |
| Cation efflux protein transmembrane domain-like | 0 | DIRECT |
| YAP1 redox domain | 0 | DIRECT |
| Aminoacid dehydrogenase-like, N-terminal domain | 0 | DIRECT |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| Cullin homology domain | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| FAD-linked oxidoreductase | 0 | DIRECT |
| FAD-linked oxidases, C-terminal domain | 0 | DIRECT |
| Homo-oligomeric flavin-containing Cys decarboxylases, HFCD | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | DIRECT |
| Ras GEF | 0 | DIRECT |
| DNA repair protein MutS, domain III | 0 | DIRECT |
| Regulator of G-protein signaling, RGS | 0 | DIRECT |
| Protease propeptides/inhibitors | 0 | DIRECT |
| Prefoldin | 0 | DIRECT |
| RNI-like | 0 | DIRECT |
| Riboflavin synthase domain-like | 0 | DIRECT |
| RCC1/BLIP-II | 0 | DIRECT |
| Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0 | DIRECT |
| Nucleoporin domain | 0 | DIRECT |
| NAD kinase/diacylglycerol kinase-like | 0 | DIRECT |
| Cytochrome c | 0 | DIRECT |
| HIT-like | 0 | DIRECT |
| Mss4-like | 0 | DIRECT |
| EF-G C-terminal domain-like | 0 | DIRECT |
| SRF-like | 0 | DIRECT |
| Pseudouridine synthase | 0 | DIRECT |
| FMN-linked oxidoreductases | 0 | DIRECT |
| Glycerol-3-phosphate (1)-acyltransferase | 0 | DIRECT |
| E set domains | 0 | DIRECT |
| Ferredoxin reductase-like, C-terminal NADP-linked domain | 0 | DIRECT |
| DNA ligase/mRNA capping enzyme, catalytic domain | 0 | DIRECT |
| Metallo-dependent hydrolases | 0 | DIRECT |
| Oligoxyloglucan reducing end-specific cellobiohydrolase | 0 | DIRECT |
| Rudiment single hybrid motif | 0 | DIRECT |
| SpoIIaa-like | 0 | DIRECT |
| Cytochrome b5-like heme/steroid binding domain | 0 | DIRECT |
| GroEL equatorial domain-like | 0 | DIRECT |
| PIN domain-like | 0 | DIRECT |
| 4'-phosphopantetheinyl transferase | 0 | DIRECT |
| HMA, heavy metal-associated domain | 0 | DIRECT |
| Cullin repeat-like | 0 | DIRECT |
| GAT-like domain | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| Family A G protein-coupled receptor-like | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Kelch motif | 0 | DIRECT |
| Tricorn protease domain 2 | 0 | DIRECT |
| GTPase activation domain, GAP | 0 | DIRECT |
| CheY-like | 0 | DIRECT |
| Ammonium transporter | 0 | DIRECT |
| Formate/glycerate dehydrogenase catalytic domain-like | 0 | DIRECT |
| Endosomal sorting complex assembly domain | 0 | DIRECT |
| Ypt/Rab-GAP domain of gyp1p | 0 | DIRECT |
| Galactose-binding domain-like | 0 | DIRECT |
| ClpP/crotonase | 0 | DIRECT |
| F-box domain | 0 | DIRECT |
| WW domain | 0 | DIRECT |
| DNA-binding domain of Mlu1-box binding protein MBP1 | 0 | DIRECT |
| CCCH zinc finger | 0 | DIRECT |
| GST C-terminal domain-like | 0 | DIRECT |
| DnaJ/Hsp40 cysteine-rich domain | 0 | DIRECT |
| Ribosomal protein S8 | 0 | DIRECT |
| Phosphoglycerate mutase-like | 0 | DIRECT |
| Cap-Gly domain | 0 | DIRECT |
| Chromo domain-like | 0 | DIRECT |
| Six-hairpin glycosidases | 0 | DIRECT |
| Ribosomal protein L6 | 0 | DIRECT |
| Single hybrid motif | 0 | DIRECT |
| Thiolase-like | 0 | DIRECT |
| PreATP-grasp domain | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| BAR/IMD domain-like | 0 | DIRECT |
| Thioesterase/thiol ester dehydrase-isomerase | 0 | DIRECT |
| Alpha-L RNA-binding motif | 0 | DIRECT |
| GroEL-intermediate domain like | 0 | DIRECT |
| GHMP Kinase, C-terminal domain | 0 | DIRECT |
| VPS9 domain | 0 | DIRECT |
| Fumarate reductase respiratory complex transmembrane subunits | 0 | DIRECT |
| S13-like H2TH domain | 0 | DIRECT |
| Ubiquitin-like | 0 | DIRECT |
| Protein prenylyltransferase | 0 | DIRECT |
| Nucleotidyltransferase | 0 | DIRECT |
| GroEL apical domain-like | 0 | DIRECT |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | DIRECT |
| Sialidases | 0 | DIRECT |
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| Amidase signature (AS) enzymes | 0 | Direct |
| Actin depolymerizing proteins | 0 | Direct |
| Tubulin nucleotide-binding domain-like | 0 | Direct |
| Carbamate kinase-like | 0 | Direct |
| Cytochrome P450 | 0 | Direct |
| LexA/Signal peptidase | 0 | Direct |
| FKBP-like | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| PA domain | 0 | Direct |
| Mitochondrial cytochrome c oxidase subunit IV | 0 | Direct |
| post-AAA+ oligomerization domain-like | 0 | Direct |
| Seven-hairpin glycosidases | 0 | Direct |
| PAP/OAS1 substrate-binding domain | 0 | Direct |
| Translational machinery components | 0 | Direct |
| (Phosphotyrosine protein) phosphatases II | 0 | Direct |
| DNA-glycosylase | 0 | Direct |
| Aldolase | 0 | Direct |
| PLP-binding barrel | 0 | Direct |
| EPT/RTPC-like | 0 | Direct |
| L domain-like | 0 | Direct |
| CRAL/TRIO N-terminal domain | 0 | Direct |
| GYF domain | 0 | Direct |
| CorA soluble domain-like | 0 | Direct |
| beta-beta-alpha zinc fingers | 0 | Direct |
| Ribosomal protein L22 | 0 | Direct |
| Sec63 N-terminal domain-like | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| Nucleotide-diphospho-sugar transferases | 0 | Direct |
| ALDH-like | 0 | Direct |
| Zinc domain conserved in yeast copper-regulated transcription factors | 0 | Direct |
| Multidrug resistance efflux transporter EmrE | 0 | Direct |
| CRAL/TRIO domain | 0 | Direct |
| YjgF-like | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| Nudix | 0 | Direct |
| HSP20-like chaperones | 0 | Direct |
| Smc hinge domain | 0 | Direct |
| LDH C-terminal domain-like | 0 | Direct |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
| Radical SAM enzymes | 0 | Direct |
| Glutamine synthetase/guanido kinase | 0 | Direct |
| Cupredoxins | 0 | Direct |
| Trimeric LpxA-like enzymes | 0 | Direct |
| Phosphoenolpyruvate/pyruvate domain | 0 | Direct |
| Zinc beta-ribbon | 0 | Direct |
| PP2C-like | 0 | Direct |
| KA1-like | 0 | Direct |
| TGS-like | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| FMN-binding split barrel | 0 | Direct |
| Citrate synthase | 0 | Direct |
| PR-1-like | 0 | Direct |
| eIF1-like | 0 | Direct |
| Transferrin receptor-like dimerisation domain | 0 | Direct |
| DNA repair protein MutS, domain I | 0 | Direct |
| Concanavalin A-like lectins/glucanases | 0 | Direct |
| Activating enzymes of the ubiquitin-like proteins | 0 | Direct |
| Tubulin C-terminal domain-like | 0 | Direct |
| tRNA-intron endonuclease catalytic domain-like | 0 | Direct |
| FabD/lysophospholipase-like | 0 | Direct |
| SAP domain | 0 | Direct |
| Acyl-CoA N-acyltransferases (Nat) | 0 | Direct |
| ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | Direct |
| Clavaminate synthase-like | 0 | Direct |
| Methylglyoxal synthase-like | 0 | Direct |
| RmlC-like cupins | 0 | Direct |
| The spindle assembly checkpoint protein mad2 | 0 | Direct |
| NagB/RpiA/CoA transferase-like | 0 | Direct |
| Aquaporin-like | 0 | Direct |
| Nucleotide-binding domain | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| HMG-box | 0 | Direct |
| DNase I-like | 0 | Direct |
| F1F0 ATP synthase subunit C | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| RBP11-like subunits of RNA polymerase | 0 | Direct |
| Glutathione synthetase ATP-binding domain-like | 0 | Direct |
| Ferritin-like | 0 | Direct |
| Galactose mutarotase-like | 0 | Direct |
| Rhomboid-like | 0 | Direct |
| HRDC-like | 0 | Direct |
| Creatinase/prolidase N-terminal domain | 0 | Direct |
| PYP-like sensor domain (PAS domain) | 0 | Direct |
| Clathrin adaptor appendage domain | 0 | Direct |
| ThrRS/AlaRS common domain | 0 | Direct |
| ACT-like | 0 | Direct |
| post-HMGL domain-like | 0 | Direct |
| t-snare proteins | 0 | Direct |
| MurD-like peptide ligases, peptide-binding domain | 0 | Direct |
| HSP40/DnaJ peptide-binding domain | 0 | Direct |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | Direct |
| Restriction endonuclease-like | 0 | Direct |
| ArfGap/RecO-like zinc finger | 0 | Direct |
| Calponin-homology domain, CH-domain | 0 | Direct |
| Heme oxygenase-like | 0 | Direct |
| Cyclophilin-like | 0 | Direct |
| R3H domain | 0 | Direct |
| FtsH protease domain-like | 0 | Direct |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
| PEBP-like | 0 | Direct |
| DPP6 N-terminal domain-like | 0 | Direct |
| ValRS/IleRS/LeuRS editing domain | 0 | Direct |
| HIT/MYND zinc finger-like | 0 | Direct |
| Alkaline phosphatase-like | 0 | Direct |
| PH domain-like | 0 | Direct |
| Hect, E3 ligase catalytic domain | 0 | Direct |
| L-aspartase-like | 0 | Direct |
| Rhodanese/Cell cycle control phosphatase | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| DNA repair protein MutS, domain II | 0 | Direct |
| HLH, helix-loop-helix DNA-binding domain | 0 | Direct |
| Ribokinase-like | 0 | Direct |
| PX domain | 0 | Direct |
| SAICAR synthase-like | 0 | Direct |
| Nop domain | 0 | Direct |
| Acid proteases | 0 | Direct |
| Ankyrin repeat | 0 | Direct |
| FAD-binding/transporter-associated domain-like | 0 | Direct |
| Sec1/munc18-like (SM) proteins | 0 | Direct |
| MurD-like peptide ligases, catalytic domain | 0 | Direct |
| Carbohydrate phosphatase | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| Subtilisin-like | 0 | Direct |
| Phospholipase D/nuclease | 0 | Direct |
| Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
| LeuD/IlvD-like | 0 | Direct |
| PLC-like phosphodiesterases | 0 | Direct |
| Cation efflux protein transmembrane domain-like | 0 | Direct |
| YAP1 redox domain | 0 | Direct |
| Aminoacid dehydrogenase-like, N-terminal domain | 0 | Direct |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| SH3-domain | 0 | Direct |
| Cullin homology domain | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| FAD-linked oxidoreductase | 0 | Direct |
| FAD-linked oxidases, C-terminal domain | 0 | Direct |
| Homo-oligomeric flavin-containing Cys decarboxylases, HFCD | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | Direct |
| Ras GEF | 0 | Direct |
| DNA repair protein MutS, domain III | 0 | Direct |
| Regulator of G-protein signaling, RGS | 0 | Direct |
| Protease propeptides/inhibitors | 0 | Direct |
| Prefoldin | 0 | Direct |
| RNI-like | 0 | Direct |
| Riboflavin synthase domain-like | 0 | Direct |
| RCC1/BLIP-II | 0 | Direct |
| Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0 | Direct |
| Nucleoporin domain | 0 | Direct |
| NAD kinase/diacylglycerol kinase-like | 0 | Direct |
| Cytochrome c | 0 | Direct |
| HIT-like | 0 | Direct |
| Mss4-like | 0 | Direct |
| EF-G C-terminal domain-like | 0 | Direct |
| SRF-like | 0 | Direct |
| Pseudouridine synthase | 0 | Direct |
| FMN-linked oxidoreductases | 0 | Direct |
| Glycerol-3-phosphate (1)-acyltransferase | 0 | Direct |
| E set domains | 0 | Direct |
| Ferredoxin reductase-like, C-terminal NADP-linked domain | 0 | Direct |
| DNA ligase/mRNA capping enzyme, catalytic domain | 0 | Direct |
| Metallo-dependent hydrolases | 0 | Direct |
| Oligoxyloglucan reducing end-specific cellobiohydrolase | 0 | Direct |
| Rudiment single hybrid motif | 0 | Direct |
| SpoIIaa-like | 0 | Direct |
| Cytochrome b5-like heme/steroid binding domain | 0 | Direct |
| GroEL equatorial domain-like | 0 | Direct |
| PIN domain-like | 0 | Direct |
| 4'-phosphopantetheinyl transferase | 0 | Direct |
| HMA, heavy metal-associated domain | 0 | Direct |
| Cullin repeat-like | 0 | Direct |
| GAT-like domain | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| Family A G protein-coupled receptor-like | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| Kelch motif | 0 | Direct |
| Tricorn protease domain 2 | 0 | Direct |
| GTPase activation domain, GAP | 0 | Direct |
| CheY-like | 0 | Direct |
| Ammonium transporter | 0 | Direct |
| Formate/glycerate dehydrogenase catalytic domain-like | 0 | Direct |
| Endosomal sorting complex assembly domain | 0 | Direct |
| Ypt/Rab-GAP domain of gyp1p | 0 | Direct |
| Galactose-binding domain-like | 0 | Direct |
| ClpP/crotonase | 0 | Direct |
| F-box domain | 0 | Direct |
| WW domain | 0 | Direct |
| DNA-binding domain of Mlu1-box binding protein MBP1 | 0 | Direct |
| CCCH zinc finger | 0 | Direct |
| GST C-terminal domain-like | 0 | Direct |
| DnaJ/Hsp40 cysteine-rich domain | 0 | Direct |
| Ribosomal protein S8 | 0 | Direct |
| Phosphoglycerate mutase-like | 0 | Direct |
| Cap-Gly domain | 0 | Direct |
| Chromo domain-like | 0 | Direct |
| Six-hairpin glycosidases | 0 | Direct |
| Ribosomal protein L6 | 0 | Direct |
| Single hybrid motif | 0 | Direct |
| Thiolase-like | 0 | Direct |
| PreATP-grasp domain | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| BAR/IMD domain-like | 0 | Direct |
| Thioesterase/thiol ester dehydrase-isomerase | 0 | Direct |
| Alpha-L RNA-binding motif | 0 | Direct |
| GroEL-intermediate domain like | 0 | Direct |
| GHMP Kinase, C-terminal domain | 0 | Direct |
| VPS9 domain | 0 | Direct |
| Fumarate reductase respiratory complex transmembrane subunits | 0 | Direct |
| S13-like H2TH domain | 0 | Direct |
| Ubiquitin-like | 0 | Direct |
| Protein prenylyltransferase | 0 | Direct |
| Nucleotidyltransferase | 0 | Direct |
| GroEL apical domain-like | 0 | Direct |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | Direct |
| Sialidases | 0 | Direct |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Duplex) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
49493,49493
49493 - HSP40/DnaJ peptide-binding domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
49503,49503
49503 - Cupredoxins
49503 - Cupredoxins | 0 | DIRECT |
52283,51735
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains | 0 | DIRECT |
53901,53901
53901 - Thiolase-like
53901 - Thiolase-like | 0 | DIRECT |
51905,51905
51905 - FAD/NAD(P)-binding domain
51905 - FAD/NAD(P)-binding domain | 0 | DIRECT |
57938,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
47923,47923
47923 - Ypt/Rab-GAP domain of gyp1p
47923 - Ypt/Rab-GAP domain of gyp1p | 0 | DIRECT |
63380,52343
63380 - Riboflavin synthase domain-like
52343 - Ferredoxin reductase-like, C-terminal NADP-linked domain | 0 | DIRECT |
52540,81271
52540 - P-loop containing nucleoside triphosphate hydrolases
81271 - TGS-like | 0 | DIRECT |
52440,56059
52440 - PreATP-grasp domain
56059 - Glutathione synthetase ATP-binding domain-like | 0 | DIRECT |
56059,51246
56059 - Glutathione synthetase ATP-binding domain-like
51246 - Rudiment single hybrid motif | 0 | DIRECT |
48592,54849
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like | 0 | DIRECT |
88723,47807
88723 - PIN domain-like
47807 - 5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
47661,58038
47661 - t-snare proteins
58038 - SNARE fusion complex | 0 | DIRECT |
54211,54980
54211 - Ribosomal protein S5 domain 2-like
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
50615,52540
50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
46938,52087
46938 - CRAL/TRIO N-terminal domain
52087 - CRAL/TRIO domain | 0 | DIRECT |
49562,49562
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | DIRECT |
51905,56425
51905 - FAD/NAD(P)-binding domain
56425 - Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | DIRECT |
51905,55424
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
51735,55347
51735 - NAD(P)-binding Rossmann-fold domains
55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | DIRECT |
81301,81631
81301 - Nucleotidyltransferase
81631 - PAP/OAS1 substrate-binding domain | 0 | DIRECT |
56235,52402
56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
52402 - Adenine nucleotide alpha hydrolases-like | 0 | DIRECT |
52777,52777
52777 - CoA-dependent acyltransferases
52777 - CoA-dependent acyltransferases | 0 | DIRECT |
54236,57829
54236 - Ubiquitin-like
57829 - Zn-binding ribosomal proteins | 0 | DIRECT |
46689,46689
46689 - Homeodomain-like
46689 - Homeodomain-like | 0 | DIRECT |
53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
53732,52016
53732 - Aconitase iron-sulfur domain
52016 - LeuD/IlvD-like | 0 | DIRECT |
53098,56672
53098 - Ribonuclease H-like
56672 - DNA/RNA polymerases | 0 | DIRECT |
48371,-7
48371 - ARM repeat
-7 - CATH | 0 | DIRECT |
53623,53244
53623 - MurD-like peptide ligases, catalytic domain
53244 - MurD-like peptide ligases, peptide-binding domain | 0 | DIRECT |
50447,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
75632,46785
75632 - Cullin homology domain
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
52540,48019
52540 - P-loop containing nucleoside triphosphate hydrolases
48019 - post-AAA+ oligomerization domain-like | 0 | DIRECT |
81333,81333
81333 - F1F0 ATP synthase subunit C
81333 - F1F0 ATP synthase subunit C | 0 | DIRECT |
143865,144083
143865 - CorA soluble domain-like
144083 - Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
46565,57938
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain | 0 | DIRECT |
52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | DIRECT |
51569,89000
51569 - Aldolase
89000 - post-HMGL domain-like | 0 | DIRECT |
54791,54791
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
54849,52029
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | DIRECT |
53756,56784
53756 - UDP-Glycosyltransferase/glycogen phosphorylase
56784 - HAD-like | 0 | DIRECT |
53150,48334
53150 - DNA repair protein MutS, domain II
48334 - DNA repair protein MutS, domain III | 0 | DIRECT |
53187,47672
53187 - Zn-dependent exopeptidases
47672 - Transferrin receptor-like dimerisation domain | 0 | DIRECT |
52540,47917
52540 - P-loop containing nucleoside triphosphate hydrolases
47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
48334,52540
48334 - DNA repair protein MutS, domain III
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
50044,50044
50044 - SH3-domain
50044 - SH3-domain | 0 | DIRECT |
54211,55060
54211 - Ribosomal protein S5 domain 2-like
55060 - GHMP Kinase, C-terminal domain | 0 | DIRECT |
52025,53187
52025 - PA domain
53187 - Zn-dependent exopeptidases | 0 | DIRECT |
90229,90229
90229 - CCCH zinc finger
90229 - CCCH zinc finger | 0 | DIRECT |
52540,140990
52540 - P-loop containing nucleoside triphosphate hydrolases
140990 - FtsH protease domain-like | 0 | DIRECT |
53223,51735
53223 - Aminoacid dehydrogenase-like, N-terminal domain
51735 - NAD(P)-binding Rossmann-fold domains | 0 | DIRECT |
54897,52743
54897 - Protease propeptides/inhibitors
52743 - Subtilisin-like | 0 | DIRECT |
52490,55307
52490 - Tubulin nucleotide-binding domain-like
55307 - Tubulin C-terminal domain-like | 0 | DIRECT |
53613,48613
53613 - Ribokinase-like
48613 - Heme oxygenase-like | 0 | DIRECT |
50249,50249
50249 - Nucleic acid-binding proteins
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
56176,55103
56176 - FAD-binding/transporter-associated domain-like
55103 - FAD-linked oxidases, C-terminal domain | 0 | DIRECT |
53738,55957
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
56091,50249
56091 - DNA ligase/mRNA capping enzyme, catalytic domain
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
54980,54211
54980 - EF-G C-terminal domain-like
54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
50978,50978
50978 - WD40 repeat-like
50978 - WD40 repeat-like | 0 | DIRECT |
48464,89009
48464 - ENTH/VHS domain
89009 - GAT-like domain | 0 | DIRECT |
52833,47616
52833 - Thioredoxin-like
47616 - GST C-terminal domain-like | 0 | DIRECT |
54631,54631
54631 - CBS-domain pair
54631 - CBS-domain pair | 0 | DIRECT |
50677,52374
50677 - ValRS/IleRS/LeuRS editing domain
52374 - Nucleotidylyl transferase | 0 | DIRECT |
52540,53254
52540 - P-loop containing nucleoside triphosphate hydrolases
53254 - Phosphoglycerate mutase-like | 0 | DIRECT |
52374,47323
52374 - Nucleotidylyl transferase
47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | DIRECT |
56053,56053
56053 - Ribosomal protein L6
56053 - Ribosomal protein L6 | 0 | DIRECT |
54928,54928
54928 - RNA-binding domain, RBD
54928 - RNA-binding domain, RBD | 0 | DIRECT |
52540,90123
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region | 0 | DIRECT |
103657,50729
103657 - BAR/IMD domain-like
50729 - PH domain-like | 0 | DIRECT |
56024,56024
56024 - Phospholipase D/nuclease
56024 - Phospholipase D/nuclease | 0 | DIRECT |
51735,56327
51735 - NAD(P)-binding Rossmann-fold domains
56327 - LDH C-terminal domain-like | 0 | DIRECT |
57756,57756
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
-9,-9
-9 - PDB
-9 - PDB | 0 | DIRECT |
46785,46785
46785 - "Winged helix" DNA-binding domain
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
57667,57667
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers | 0 | DIRECT |
52058,52058
52058 - L domain-like
52058 - L domain-like | 0 | DIRECT |
50249,50104
50249 - Nucleic acid-binding proteins
50104 - Translation proteins SH3-like domain | 0 | DIRECT |
103473,103473
103473 - MFS general substrate transporter
103473 - MFS general substrate transporter | 0 | DIRECT |
57850,52540
57850 - RING/U-box
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
55874,54211
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
49493,49493
49493 - HSP40/DnaJ peptide-binding domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | Direct |
49503,49503
49503 - Cupredoxins
49503 - Cupredoxins | 0 | Direct |
52283,51735
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains | 0 | Direct |
53901,53901
53901 - Thiolase-like
53901 - Thiolase-like | 0 | Direct |
51905,51905
51905 - FAD/NAD(P)-binding domain
51905 - FAD/NAD(P)-binding domain | 0 | Direct |
57938,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | Direct |
47923,47923
47923 - Ypt/Rab-GAP domain of gyp1p
47923 - Ypt/Rab-GAP domain of gyp1p | 0 | Direct |
63380,52343
63380 - Riboflavin synthase domain-like
52343 - Ferredoxin reductase-like, C-terminal NADP-linked domain | 0 | Direct |
52540,81271
52540 - P-loop containing nucleoside triphosphate hydrolases
81271 - TGS-like | 0 | Direct |
52440,56059
52440 - PreATP-grasp domain
56059 - Glutathione synthetase ATP-binding domain-like | 0 | Direct |
56059,51246
56059 - Glutathione synthetase ATP-binding domain-like
51246 - Rudiment single hybrid motif | 0 | Direct |
48592,54849
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like | 0 | Direct |
88723,47807
88723 - PIN domain-like
47807 - 5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
47661,58038
47661 - t-snare proteins
58038 - SNARE fusion complex | 0 | Direct |
54211,54980
54211 - Ribosomal protein S5 domain 2-like
54980 - EF-G C-terminal domain-like | 0 | Direct |
50615,52540
50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
46938,52087
46938 - CRAL/TRIO N-terminal domain
52087 - CRAL/TRIO domain | 0 | Direct |
49562,49562
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | Direct |
51905,56425
51905 - FAD/NAD(P)-binding domain
56425 - Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | Direct |
51905,55424
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
51735,55347
51735 - NAD(P)-binding Rossmann-fold domains
55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | Direct |
81301,81631
81301 - Nucleotidyltransferase
81631 - PAP/OAS1 substrate-binding domain | 0 | Direct |
56235,52402
56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
52402 - Adenine nucleotide alpha hydrolases-like | 0 | Direct |
52777,52777
52777 - CoA-dependent acyltransferases
52777 - CoA-dependent acyltransferases | 0 | Direct |
54236,57829
54236 - Ubiquitin-like
57829 - Zn-binding ribosomal proteins | 0 | Direct |
46689,46689
46689 - Homeodomain-like
46689 - Homeodomain-like | 0 | Direct |
53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
53732,52016
53732 - Aconitase iron-sulfur domain
52016 - LeuD/IlvD-like | 0 | Direct |
53098,56672
53098 - Ribonuclease H-like
56672 - DNA/RNA polymerases | 0 | Direct |
48371,-7
48371 - ARM repeat
-7 - CATH | 0 | Direct |
53623,53244
53623 - MurD-like peptide ligases, catalytic domain
53244 - MurD-like peptide ligases, peptide-binding domain | 0 | Direct |
50447,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | Direct |
75632,46785
75632 - Cullin homology domain
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
52540,48019
52540 - P-loop containing nucleoside triphosphate hydrolases
48019 - post-AAA+ oligomerization domain-like | 0 | Direct |
81333,81333
81333 - F1F0 ATP synthase subunit C
81333 - F1F0 ATP synthase subunit C | 0 | Direct |
143865,144083
143865 - CorA soluble domain-like
144083 - Magnesium transport protein CorA, transmembrane region | 0 | Direct |
46565,57938
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain | 0 | Direct |
52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | Direct |
51569,89000
51569 - Aldolase
89000 - post-HMGL domain-like | 0 | Direct |
54791,54791
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
54849,52029
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | Direct |
53756,56784
53756 - UDP-Glycosyltransferase/glycogen phosphorylase
56784 - HAD-like | 0 | Direct |
53150,48334
53150 - DNA repair protein MutS, domain II
48334 - DNA repair protein MutS, domain III | 0 | Direct |
53187,47672
53187 - Zn-dependent exopeptidases
47672 - Transferrin receptor-like dimerisation domain | 0 | Direct |
52540,47917
52540 - P-loop containing nucleoside triphosphate hydrolases
47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
48334,52540
48334 - DNA repair protein MutS, domain III
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
50044,50044
50044 - SH3-domain
50044 - SH3-domain | 0 | Direct |
54211,55060
54211 - Ribosomal protein S5 domain 2-like
55060 - GHMP Kinase, C-terminal domain | 0 | Direct |
52025,53187
52025 - PA domain
53187 - Zn-dependent exopeptidases | 0 | Direct |
90229,90229
90229 - CCCH zinc finger
90229 - CCCH zinc finger | 0 | Direct |
52540,140990
52540 - P-loop containing nucleoside triphosphate hydrolases
140990 - FtsH protease domain-like | 0 | Direct |
53223,51735
53223 - Aminoacid dehydrogenase-like, N-terminal domain
51735 - NAD(P)-binding Rossmann-fold domains | 0 | Direct |
54897,52743
54897 - Protease propeptides/inhibitors
52743 - Subtilisin-like | 0 | Direct |
52490,55307
52490 - Tubulin nucleotide-binding domain-like
55307 - Tubulin C-terminal domain-like | 0 | Direct |
53613,48613
53613 - Ribokinase-like
48613 - Heme oxygenase-like | 0 | Direct |
50249,50249
50249 - Nucleic acid-binding proteins
50249 - Nucleic acid-binding proteins | 0 | Direct |
56176,55103
56176 - FAD-binding/transporter-associated domain-like
55103 - FAD-linked oxidases, C-terminal domain | 0 | Direct |
53738,55957
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
56091,50249
56091 - DNA ligase/mRNA capping enzyme, catalytic domain
50249 - Nucleic acid-binding proteins | 0 | Direct |
54980,54211
54980 - EF-G C-terminal domain-like
54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
50978,50978
50978 - WD40 repeat-like
50978 - WD40 repeat-like | 0 | Direct |
48464,89009
48464 - ENTH/VHS domain
89009 - GAT-like domain | 0 | Direct |
52833,47616
52833 - Thioredoxin-like
47616 - GST C-terminal domain-like | 0 | Direct |
54631,54631
54631 - CBS-domain pair
54631 - CBS-domain pair | 0 | Direct |
50677,52374
50677 - ValRS/IleRS/LeuRS editing domain
52374 - Nucleotidylyl transferase | 0 | Direct |
52540,53254
52540 - P-loop containing nucleoside triphosphate hydrolases
53254 - Phosphoglycerate mutase-like | 0 | Direct |
52374,47323
52374 - Nucleotidylyl transferase
47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | Direct |
56053,56053
56053 - Ribosomal protein L6
56053 - Ribosomal protein L6 | 0 | Direct |
54928,54928
54928 - RNA-binding domain, RBD
54928 - RNA-binding domain, RBD | 0 | Direct |
52540,90123
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region | 0 | Direct |
103657,50729
103657 - BAR/IMD domain-like
50729 - PH domain-like | 0 | Direct |
56024,56024
56024 - Phospholipase D/nuclease
56024 - Phospholipase D/nuclease | 0 | Direct |
51735,56327
51735 - NAD(P)-binding Rossmann-fold domains
56327 - LDH C-terminal domain-like | 0 | Direct |
57756,57756
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
-9,-9
-9 - PDB
-9 - PDB | 0 | Direct |
46785,46785
46785 - "Winged helix" DNA-binding domain
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
57667,57667
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers | 0 | Direct |
52058,52058
52058 - L domain-like
52058 - L domain-like | 0 | Direct |
50249,50104
50249 - Nucleic acid-binding proteins
50104 - Translation proteins SH3-like domain | 0 | Direct |
103473,103473
103473 - MFS general substrate transporter
103473 - MFS general substrate transporter | 0 | Direct |
57850,52540
57850 - RING/U-box
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
55874,54211
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Triple) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
53738,53738,55957
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
53150,48334,52540
53150 - DNA repair protein MutS, domain II
48334 - DNA repair protein MutS, domain III
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
48452,48452,48452
48452 - TPR-like
48452 - TPR-like
48452 - TPR-like | 0 | DIRECT |
57938,49493,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
49503,49503,49503
49503 - Cupredoxins
49503 - Cupredoxins
49503 - Cupredoxins | 0 | DIRECT |
50615,52540,47917
50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
52540 - P-loop containing nucleoside triphosphate hydrolases
47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
52540,90123,52540
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
48592,54849,52029
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | DIRECT |
52440,56059,51246
52440 - PreATP-grasp domain
56059 - Glutathione synthetase ATP-binding domain-like
51246 - Rudiment single hybrid motif | 0 | DIRECT |
54980,54211,54980
54980 - EF-G C-terminal domain-like
54211 - Ribosomal protein S5 domain 2-like
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
90123,52540,90123
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region | 0 | DIRECT |
52025,53187,47672
52025 - PA domain
53187 - Zn-dependent exopeptidases
47672 - Transferrin receptor-like dimerisation domain | 0 | DIRECT |
49562,49562,49562
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | DIRECT |
53738,53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
57756,57756,57756
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
46565,57938,49493
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
52540,50447,54980
52540 - P-loop containing nucleoside triphosphate hydrolases
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
50447,54980,54211
50447 - Translation proteins
54980 - EF-G C-terminal domain-like
54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
53738,53738,55957
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
53150,48334,52540
53150 - DNA repair protein MutS, domain II
48334 - DNA repair protein MutS, domain III
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
48452,48452,48452
48452 - TPR-like
48452 - TPR-like
48452 - TPR-like | 0 | Direct |
57938,49493,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | Direct |
49503,49503,49503
49503 - Cupredoxins
49503 - Cupredoxins
49503 - Cupredoxins | 0 | Direct |
50615,52540,47917
50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
52540 - P-loop containing nucleoside triphosphate hydrolases
47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
52540,90123,52540
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
48592,54849,52029
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | Direct |
52440,56059,51246
52440 - PreATP-grasp domain
56059 - Glutathione synthetase ATP-binding domain-like
51246 - Rudiment single hybrid motif | 0 | Direct |
54980,54211,54980
54980 - EF-G C-terminal domain-like
54211 - Ribosomal protein S5 domain 2-like
54980 - EF-G C-terminal domain-like | 0 | Direct |
90123,52540,90123
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region | 0 | Direct |
52025,53187,47672
52025 - PA domain
53187 - Zn-dependent exopeptidases
47672 - Transferrin receptor-like dimerisation domain | 0 | Direct |
49562,49562,49562
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
49562 - C2 domain (Calcium/lipid-binding domain, CaLB)
49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | Direct |
53738,53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
57756,57756,57756
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
46565,57938,49493
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | Direct |
52540,50447,54980
52540 - P-loop containing nucleoside triphosphate hydrolases
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | Direct |
50447,54980,54211
50447 - Translation proteins
54980 - EF-G C-terminal domain-like
54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Plot distribution on species Tree Of Life (sTOL) for Superfamily and/or Family domains annotated by this YP term
 |
Plot tree as:
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Download Newick format tree:
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( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domain
architecture data for all genomes in SUPERFAMILY. The PAUP
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
Plot distribution on species Tree Of Life (sTOL) for single supra-domains annotated by this YP term
|
Plot tree as:
| |
Download Newick format tree:
| |
Browsing in TREE OF LIFE:
|
( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
|
|
> BO Hierarchy > competitive fitness
