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Plant structure DEvelopment stage (PDE): plant embryo stage 
(show info)
Biomedical Ontology
Like Gene Ontology (GO), biomedical ontology such as phenotype ontology classifies and organizes gene-mutant/null phenotypic information from the very general at the top to more specific terms in the directed acyclic graph (DAG) by viewing an individual term as a node and its relations to parental terms (allowing for multiple parents) as directed edges. To navigate this hierarchy, we display all parental phenotypic terms to the current phenotypic term of interest ordered by their shortest distances to the current term. Also, only direct children phenotypic terms of the current phenotypic term are listed. Biomedical ontologies we have incorporated are as follows:
- Disease Ontology (DO) Ontology DO semantically integrates disease and medical vocabularies through extensive cross mapping of DO terms to MeSH, ICD, NCI’s thesaurus, SNOMED and OMIM.
- Human Phenotype (HP) Ontology HP captures phenotypic abnormalities that are described in OMIM, along with the corresponding disease-causing genes. It includes three complementary biological concepts: Mode_of_Inheritance (MI), ONset_and_clinical_course (ON), and Phenotypic_Abnormality (PA).
- Mouse Phenotype (MP) Ontology MP describes phenotypes of the mouse after a specific gene is genetically disrupted. Using it, Mouse Genome Informatics (MGI) provides high-coverate gene-level phenotypes for the mouse.
- Worm Phenotype (WP) Ontology WP classifies and organizes phenotype descriptions for C. elegans and other nematodes. Using it, WormBase provides primary resource for phenotype annotations for C. elegans.
- Yeast Phenotype (YP) Ontology Based on YP which is the major contributor to the ‘Ascomycete phenotype ontology’, Saccharomyces Genome Database (SGD) provides single mutant phenotypes for every gene in the yeast genome.
- Fly Phenotype (FP) Ontology FP refers to FlyBase controlled vocabulary. Specifically, a structured controlled vocabulary is used for the annotation of alleles (for their mutagen etc) in FlyBase.
- Fly Anatomy (FA) Ontology FA is a structured controlled vocabulary of the anatomy of Drosophila melanogaster, used for the description of phenotypes and where a gene is expressed.
- Zebrafish Anatomy (ZA) Ontology ZA displays anatomical terms of the zebrafish using standard anatomical nomenclature, together with affected genes.
- Xenopus Anatomy (XA) Ontology XA represents the lineage of tissues and the timing of development for frogs (Xenopus laevis and Xenopus tropicalis). It is used to annotate Xenopus gene expression patterns and mutant and morphant phenotypes.
- Arabidopsis Plant Ontology (AP) Ontology As a major contributor to Plant Ontology which describes plant anatomical and morphological structures (AN) and growth and developmental stages (DE), the Arabidopsis Information Resource (TAIR) provides arabidopsis plant ontology annotations for the model higher plant Arabidopsis thaliana.
- Enzyme Commission (EC) Ontology Each enzyme is allocated a four-digit EC number, the first three digits of which define the reaction catalysed and the fourth of which is a unique identifier (serial number). Each enzyme is also assigned a systematic name that uniquely defines the reaction catalysed.
- UniProtKB KeyWords (KW) Ontology Keywords in UniProtKB are controlled vocabulary, providing a summary of the entry content and are used to index UniProtKB/Swiss-Prot entries based on 10 categories (the category "Technical term" being excluded here). Each keyword is attributed manually to UniProtKB/Swiss-Prot entries and automatically to UniProtKB/TrEMBL entries (according to specific annotation rules).
- CTD Diseases (CD) Ontology CD is MEDIC disease vocabulary that is modified by CTD from the "Diseases" [C] branch of Medical Subject Headings (MeSH), combined with genetic disorders from the Online Mendelian Inheritance in OMIM database.
- CTD Chemicals (CC) Ontology CC is chemical vocabulary that is adapted by CTD from the "Chemicals and Drugs" category and Supplementary Concept Records of Medical Subject Headings (MeSH, a hierarchical vocabulary used to index articles for MEDLINE/PubMed).
Jump to [ Top · Hierarchy · Annotations ]
Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)
Jump to [ Top · Hierarchy ]
Superfamily( show details)
Highlighted in gray are those with FDR_all>0.001
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| Signal peptide-binding domain | 0 | DIRECT |
| Protease propeptides/inhibitors | 0 | DIRECT |
| E2F-DP heterodimerization region | 0 | DIRECT |
| Cysteine alpha-hairpin motif | 0 | DIRECT |
| CO dehydrogenase molybdoprotein N-domain-like | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| Caspase-like | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| DNA repair protein MutS, domain I | 0 | DIRECT |
| Lipocalins | 0 | DIRECT |
| LysM domain | 0 | DIRECT |
| RBP11-like subunits of RNA polymerase | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| TATA-box binding protein-like | 0 | DIRECT |
| Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
| Phosphofructokinase | 0 | DIRECT |
| Amidase signature (AS) enzymes | 0 | DIRECT |
| BSD domain-like | 0 | DIRECT |
| Rudiment single hybrid motif | 0 | DIRECT |
| HMG-box | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| beta and beta-prime subunits of DNA dependent RNA-polymerase | 0 | DIRECT |
| Quinoprotein alcohol dehydrogenase-like | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| PapD-like | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| tRNA-binding arm | 0 | DIRECT |
| Cryptochrome/photolyase, N-terminal domain | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| Oxygen-evolving enhancer protein 3, | 0 | DIRECT |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | DIRECT |
| lambda repressor-like DNA-binding domains | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| Creatinase/aminopeptidase | 0 | DIRECT |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| Carbamate kinase-like | 0 | DIRECT |
| Thiamin diphosphate-binding fold (THDP-binding) | 0 | DIRECT |
| Putative isomerase YbhE | 0 | DIRECT |
| YrdC/RibB | 0 | DIRECT |
| Release factor | 0 | DIRECT |
| Tautomerase/MIF | 0 | DIRECT |
| PreATP-grasp domain | 0 | DIRECT |
| L9 N-domain-like | 0 | DIRECT |
| Ribosomal protein L1 | 0 | DIRECT |
| Glutathione synthetase ATP-binding domain-like | 0 | DIRECT |
| Aminoacid dehydrogenase-like, N-terminal domain | 0 | DIRECT |
| CHY zinc finger-like | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Electron transport accessory proteins | 0 | DIRECT |
| Endosomal sorting complex assembly domain | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| Single hybrid motif | 0 | DIRECT |
| Chelatase | 0 | DIRECT |
| FKBP-like | 0 | DIRECT |
| Sec1/munc18-like (SM) proteins | 0 | DIRECT |
| PLP-binding barrel | 0 | DIRECT |
| Mitochondrial glycoprotein MAM33-like | 0 | DIRECT |
| Sm-like ribonucleoproteins | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| Homodimeric domain of signal transducing histidine kinase | 0 | DIRECT |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
| Cyclophilin-like | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| DNA ligase/mRNA capping enzyme, catalytic domain | 0 | DIRECT |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
| Pentapeptide repeat-like | 0 | DIRECT |
| Retrovirus zinc finger-like domains | 0 | DIRECT |
| Chalcone isomerase | 0 | DIRECT |
| SMAD/FHA domain | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| beta-sandwich domain of Sec23/24 | 0 | DIRECT |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
| Nucleoside diphosphate kinase, NDK | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
| EF-G C-terminal domain-like | 0 | DIRECT |
| RL5-like | 0 | DIRECT |
| Folate-binding domain | 0 | DIRECT |
| Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
| Isochorismatase-like hydrolases | 0 | DIRECT |
| Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
| FMN-binding split barrel | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Ribonuclease PH domain 2-like | 0 | DIRECT |
| Enolase C-terminal domain-like | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| TK C-terminal domain-like | 0 | DIRECT |
| Plus3-like | 0 | DIRECT |
| Metallo-dependent hydrolases | 0 | DIRECT |
| LuxS/MPP-like metallohydrolase | 0 | DIRECT |
| Bacterial exopeptidase dimerisation domain | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| BEACH domain | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| beta-N-acetylhexosaminidase-like domain | 0 | DIRECT |
| Macro domain-like | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| Radical SAM enzymes | 0 | DIRECT |
| Chorismate mutase II | 0 | DIRECT |
| Activating enzymes of the ubiquitin-like proteins | 0 | DIRECT |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
| Ribosomal protein L25-like | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| RNase III domain-like | 0 | DIRECT |
| GlnB-like | 0 | DIRECT |
| Peptidyl-tRNA hydrolase II | 0 | DIRECT |
| LigT-like | 0 | DIRECT |
| alpha/beta knot | 0 | DIRECT |
| Chromo domain-like | 0 | DIRECT |
| Serine metabolism enzymes domain | 0 | DIRECT |
| L28p-like | 0 | DIRECT |
| FAH | 0 | DIRECT |
| Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
| Zinc hairpin stack | 0 | DIRECT |
| Prokaryotic type KH domain (KH-domain type II) | 0 | DIRECT |
| Heme oxygenase-like | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| CO dehydrogenase ISP C-domain like | 0 | DIRECT |
| Diaminopimelate epimerase-like | 0 | DIRECT |
| WW domain | 0 | DIRECT |
| Elongation factor TFIIS domain 2 | 0 | DIRECT |
| S13-like H2TH domain | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| beta-carbonic anhydrase, cab | 0 | DIRECT |
| Rubredoxin-like | 0 | DIRECT |
| DNA repair protein MutS, domain II | 0 | DIRECT |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | DIRECT |
| ARID-like | 0 | DIRECT |
| Ribosomal protein L16p/L10e | 0 | DIRECT |
| ssDNA-binding transcriptional regulator domain | 0 | DIRECT |
| Carbon-nitrogen hydrolase | 0 | DIRECT |
| GroEL-intermediate domain like | 0 | DIRECT |
| LanC-like | 0 | DIRECT |
| AlbA-like | 0 | DIRECT |
| Alpha-L RNA-binding motif | 0 | DIRECT |
| CO dehydrogenase flavoprotein C-terminal domain-like | 0 | DIRECT |
| GroEL equatorial domain-like | 0 | DIRECT |
| GroEL apical domain-like | 0 | DIRECT |
| PIN domain-like | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| HIT/MYND zinc finger-like | 0 | DIRECT |
| S15/NS1 RNA-binding domain | 0 | DIRECT |
| Flavoproteins | 0 | DIRECT |
| Pseudouridine synthase | 0 | DIRECT |
| MOSC N-terminal domain-like | 0 | DIRECT |
| Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
| Cytochrome c | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
| Probable bacterial effector-binding domain | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| dsRNA-binding domain-like | 0 | DIRECT |
| GINS helical bundle-like | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| Enolase N-terminal domain-like | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| Ricin B-like lectins | 0 | DIRECT |
| Seven-hairpin glycosidases | 0 | DIRECT |
| D-aminoacid aminotransferase-like PLP-dependent enzymes | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| RplX-like | 0 | DIRECT |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
| Thioesterase/thiol ester dehydrase-isomerase | 0 | DIRECT |
| SBT domain | 0 | DIRECT |
| ATP-dependent DNA ligase DNA-binding domain | 0 | DIRECT |
| CYTH-like phosphatases | 0 | DIRECT |
| Inorganic pyrophosphatase | 0 | DIRECT |
| SAM/Pointed domain | 0 | DIRECT |
| Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
| Ribosomal protein S10 | 0 | DIRECT |
| AF1104-like | 0 | DIRECT |
| Glutamine synthetase, N-terminal domain | 0 | DIRECT |
| Formyltransferase | 0 | DIRECT |
| post-AAA+ oligomerization domain-like | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| Molybdenum cofactor-binding domain | 0 | DIRECT |
| Poly A polymerase C-terminal region-like | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| SMR domain-like | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| MurD-like peptide ligases, catalytic domain | 0 | DIRECT |
| Creatinase/prolidase N-terminal domain | 0 | DIRECT |
| DHS-like NAD/FAD-binding domain | 0 | DIRECT |
| HRDC-like | 0 | DIRECT |
| YhbY-like | 0 | DIRECT |
| DNA clamp | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| Prefoldin | 0 | DIRECT |
| PAH2 domain | 0 | DIRECT |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| Sec63 N-terminal domain-like | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| Rhodanese/Cell cycle control phosphatase | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| MurD-like peptide ligases, peptide-binding domain | 0 | DIRECT |
| BAR/IMD domain-like | 0 | DIRECT |
| Ribulose-phoshate binding barrel | 0 | DIRECT |
| Peptidase/esterase 'gauge' domain | 0 | DIRECT |
| Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| HIT-like | 0 | DIRECT |
| DnaJ/Hsp40 cysteine-rich domain | 0 | DIRECT |
| SIS domain | 0 | DIRECT |
| BRCT domain | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| Smc hinge domain | 0 | DIRECT |
| ADC-like | 0 | DIRECT |
| Ribosomal proteins L15p and L18e | 0 | DIRECT |
| Tim10-like | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| Ribonuclease Rh-like | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| Glutamine synthetase/guanido kinase | 0 | DIRECT |
| PX domain | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
| Phospholipase C/P1 nuclease | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| PAZ domain | 0 | DIRECT |
| Alkaline phosphatase-like | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| Ran binding protein zinc finger-like | 0 | DIRECT |
| Heme-dependent catalase-like | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | DIRECT |
| The spindle assembly checkpoint protein mad2 | 0 | DIRECT |
| Dimeric alpha+beta barrel | 0 | DIRECT |
| Ribosomal L27 protein-like | 0 | DIRECT |
| Formate/glycerate dehydrogenase catalytic domain-like | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| Globin-like | 0 | DIRECT |
| ClpS-like | 0 | DIRECT |
| Mog1p/PsbP-like | 0 | DIRECT |
| Phosphoglycerate mutase-like | 0 | DIRECT |
| RNA-binding domain, RBD | 0.0005709 | DIRECT |
| TPR-like | 0.0006144 | DIRECT |
| WD40 repeat-like | 0.001434 | INHERITED FROM: E expanded cotyledon stage |
| ClpP/crotonase | 0.009125 | INHERITED FROM: F mature embryo stage |
| Nucleotidylyl transferase | 0.01272 | INHERITED FROM: D bilateral stage || F mature embryo stage |
| ARM repeat | 0.02632 | INHERITED FROM: D bilateral stage || F mature embryo stage |
| Nucleic acid-binding proteins | 0.06265 | INHERITED FROM: E expanded cotyledon stage |
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| Signal peptide-binding domain | 0 | Direct |
| Protease propeptides/inhibitors | 0 | Direct |
| E2F-DP heterodimerization region | 0 | Direct |
| Cysteine alpha-hairpin motif | 0 | Direct |
| CO dehydrogenase molybdoprotein N-domain-like | 0 | Direct |
| SH3-domain | 0 | Direct |
| Caspase-like | 0 | Direct |
| RraA-like | 0 | Direct |
| DNA repair protein MutS, domain I | 0 | Direct |
| Lipocalins | 0 | Direct |
| LysM domain | 0 | Direct |
| RBP11-like subunits of RNA polymerase | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| TATA-box binding protein-like | 0 | Direct |
| Composite domain of metallo-dependent hydrolases | 0 | Direct |
| Phosphofructokinase | 0 | Direct |
| Amidase signature (AS) enzymes | 0 | Direct |
| BSD domain-like | 0 | Direct |
| Rudiment single hybrid motif | 0 | Direct |
| HMG-box | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| beta and beta-prime subunits of DNA dependent RNA-polymerase | 0 | Direct |
| Quinoprotein alcohol dehydrogenase-like | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| PapD-like | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| tRNA-binding arm | 0 | Direct |
| Cryptochrome/photolyase, N-terminal domain | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| Oxygen-evolving enhancer protein 3, | 0 | Direct |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | Direct |
| lambda repressor-like DNA-binding domains | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| Creatinase/aminopeptidase | 0 | Direct |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| Carbamate kinase-like | 0 | Direct |
| Thiamin diphosphate-binding fold (THDP-binding) | 0 | Direct |
| Putative isomerase YbhE | 0 | Direct |
| YrdC/RibB | 0 | Direct |
| Release factor | 0 | Direct |
| Tautomerase/MIF | 0 | Direct |
| PreATP-grasp domain | 0 | Direct |
| L9 N-domain-like | 0 | Direct |
| Ribosomal protein L1 | 0 | Direct |
| Glutathione synthetase ATP-binding domain-like | 0 | Direct |
| Aminoacid dehydrogenase-like, N-terminal domain | 0 | Direct |
| CHY zinc finger-like | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Electron transport accessory proteins | 0 | Direct |
| Endosomal sorting complex assembly domain | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| Single hybrid motif | 0 | Direct |
| Chelatase | 0 | Direct |
| FKBP-like | 0 | Direct |
| Sec1/munc18-like (SM) proteins | 0 | Direct |
| PLP-binding barrel | 0 | Direct |
| Mitochondrial glycoprotein MAM33-like | 0 | Direct |
| Sm-like ribonucleoproteins | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| Homodimeric domain of signal transducing histidine kinase | 0 | Direct |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
| Cyclophilin-like | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| DNA ligase/mRNA capping enzyme, catalytic domain | 0 | Direct |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
| Pentapeptide repeat-like | 0 | Direct |
| Retrovirus zinc finger-like domains | 0 | Direct |
| Chalcone isomerase | 0 | Direct |
| SMAD/FHA domain | 0 | Direct |
| BolA-like | 0 | Direct |
| beta-sandwich domain of Sec23/24 | 0 | Direct |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
| Nucleoside diphosphate kinase, NDK | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
| EF-G C-terminal domain-like | 0 | Direct |
| RL5-like | 0 | Direct |
| Folate-binding domain | 0 | Direct |
| Peptidyl-tRNA hydrolase-like | 0 | Direct |
| Isochorismatase-like hydrolases | 0 | Direct |
| Expressed protein At2g23090/F21P24.15 | 0 | Direct |
| FMN-binding split barrel | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Ribonuclease PH domain 2-like | 0 | Direct |
| Enolase C-terminal domain-like | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| TK C-terminal domain-like | 0 | Direct |
| Plus3-like | 0 | Direct |
| Metallo-dependent hydrolases | 0 | Direct |
| LuxS/MPP-like metallohydrolase | 0 | Direct |
| Bacterial exopeptidase dimerisation domain | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| BEACH domain | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| beta-N-acetylhexosaminidase-like domain | 0 | Direct |
| Macro domain-like | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| Radical SAM enzymes | 0 | Direct |
| Chorismate mutase II | 0 | Direct |
| Activating enzymes of the ubiquitin-like proteins | 0 | Direct |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
| Ribosomal protein L25-like | 0 | Direct |
| FF domain | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| RNase III domain-like | 0 | Direct |
| GlnB-like | 0 | Direct |
| Peptidyl-tRNA hydrolase II | 0 | Direct |
| LigT-like | 0 | Direct |
| alpha/beta knot | 0 | Direct |
| Chromo domain-like | 0 | Direct |
| Serine metabolism enzymes domain | 0 | Direct |
| L28p-like | 0 | Direct |
| FAH | 0 | Direct |
| Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
| Zinc hairpin stack | 0 | Direct |
| Prokaryotic type KH domain (KH-domain type II) | 0 | Direct |
| Heme oxygenase-like | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| CO dehydrogenase ISP C-domain like | 0 | Direct |
| Diaminopimelate epimerase-like | 0 | Direct |
| WW domain | 0 | Direct |
| Elongation factor TFIIS domain 2 | 0 | Direct |
| S13-like H2TH domain | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| beta-carbonic anhydrase, cab | 0 | Direct |
| Rubredoxin-like | 0 | Direct |
| DNA repair protein MutS, domain II | 0 | Direct |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | Direct |
| ARID-like | 0 | Direct |
| Ribosomal protein L16p/L10e | 0 | Direct |
| ssDNA-binding transcriptional regulator domain | 0 | Direct |
| Carbon-nitrogen hydrolase | 0 | Direct |
| GroEL-intermediate domain like | 0 | Direct |
| LanC-like | 0 | Direct |
| AlbA-like | 0 | Direct |
| Alpha-L RNA-binding motif | 0 | Direct |
| CO dehydrogenase flavoprotein C-terminal domain-like | 0 | Direct |
| GroEL equatorial domain-like | 0 | Direct |
| GroEL apical domain-like | 0 | Direct |
| PIN domain-like | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| HIT/MYND zinc finger-like | 0 | Direct |
| S15/NS1 RNA-binding domain | 0 | Direct |
| Flavoproteins | 0 | Direct |
| Pseudouridine synthase | 0 | Direct |
| MOSC N-terminal domain-like | 0 | Direct |
| Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
| Cytochrome c | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
| Probable bacterial effector-binding domain | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| dsRNA-binding domain-like | 0 | Direct |
| GINS helical bundle-like | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| Enolase N-terminal domain-like | 0 | Direct |
| eIF1-like | 0 | Direct |
| Ricin B-like lectins | 0 | Direct |
| Seven-hairpin glycosidases | 0 | Direct |
| D-aminoacid aminotransferase-like PLP-dependent enzymes | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| RplX-like | 0 | Direct |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
| Thioesterase/thiol ester dehydrase-isomerase | 0 | Direct |
| SBT domain | 0 | Direct |
| ATP-dependent DNA ligase DNA-binding domain | 0 | Direct |
| CYTH-like phosphatases | 0 | Direct |
| Inorganic pyrophosphatase | 0 | Direct |
| SAM/Pointed domain | 0 | Direct |
| Ribosomal protein L11, C-terminal domain | 0 | Direct |
| Ribosomal protein S10 | 0 | Direct |
| AF1104-like | 0 | Direct |
| Glutamine synthetase, N-terminal domain | 0 | Direct |
| Formyltransferase | 0 | Direct |
| post-AAA+ oligomerization domain-like | 0 | Direct |
| R3H domain | 0 | Direct |
| Molybdenum cofactor-binding domain | 0 | Direct |
| Poly A polymerase C-terminal region-like | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| SMR domain-like | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| MurD-like peptide ligases, catalytic domain | 0 | Direct |
| Creatinase/prolidase N-terminal domain | 0 | Direct |
| DHS-like NAD/FAD-binding domain | 0 | Direct |
| HRDC-like | 0 | Direct |
| YhbY-like | 0 | Direct |
| DNA clamp | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| Prefoldin | 0 | Direct |
| PAH2 domain | 0 | Direct |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| Sec63 N-terminal domain-like | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| Rhodanese/Cell cycle control phosphatase | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| MurD-like peptide ligases, peptide-binding domain | 0 | Direct |
| BAR/IMD domain-like | 0 | Direct |
| Ribulose-phoshate binding barrel | 0 | Direct |
| Peptidase/esterase 'gauge' domain | 0 | Direct |
| Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| HIT-like | 0 | Direct |
| DnaJ/Hsp40 cysteine-rich domain | 0 | Direct |
| SIS domain | 0 | Direct |
| BRCT domain | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| Smc hinge domain | 0 | Direct |
| ADC-like | 0 | Direct |
| Ribosomal proteins L15p and L18e | 0 | Direct |
| Tim10-like | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| Ribonuclease Rh-like | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| Glutamine synthetase/guanido kinase | 0 | Direct |
| PX domain | 0 | Direct |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
| Phospholipase C/P1 nuclease | 0 | Direct |
| RibA-like | 0 | Direct |
| PAZ domain | 0 | Direct |
| Alkaline phosphatase-like | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| NHL repeat | 0 | Direct |
| HesB-like domain | 0 | Direct |
| Ran binding protein zinc finger-like | 0 | Direct |
| Heme-dependent catalase-like | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | Direct |
| The spindle assembly checkpoint protein mad2 | 0 | Direct |
| Dimeric alpha+beta barrel | 0 | Direct |
| Ribosomal L27 protein-like | 0 | Direct |
| Formate/glycerate dehydrogenase catalytic domain-like | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| Globin-like | 0 | Direct |
| ClpS-like | 0 | Direct |
| Mog1p/PsbP-like | 0 | Direct |
| Phosphoglycerate mutase-like | 0 | Direct |
| RNA-binding domain, RBD | 0.0005709 | Direct |
| TPR-like | 0.0006144 | Direct |
| WD40 repeat-like | 0.001434 | Inherited |
| ClpP/crotonase | 0.009125 | Inherited |
| Nucleotidylyl transferase | 0.01272 | Inherited |
| ARM repeat | 0.02632 | Inherited |
| Nucleic acid-binding proteins | 0.06265 | Inherited |
LINKTO: Domain2BO Download and Domain2BO Algorithm
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Family( show details)
Highlighted in gray are those with FDR_all>0.001
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| GroEL-like chaperone, apical domain | 0 | DIRECT |
| DNA repair glycosylase, 2 C-terminal domains | 0 | DIRECT |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| Cystathionine synthase-like | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| IF2B-like | 0 | DIRECT |
| EF-G/eEF-2 domains III and V | 0 | DIRECT |
| Clathrin coat assembly domain | 0 | DIRECT |
| Cyclophilin (peptidylprolyl isomerase) | 0 | DIRECT |
| GAPDH-like | 0 | DIRECT |
| Pseudouridine synthase II TruB | 0 | DIRECT |
| Heme-dependent catalases | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
| Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain | 0 | DIRECT |
| DNase I-like | 0 | DIRECT |
| Glycerol-3-phosphate dehydrogenase | 0 | DIRECT |
| Aminoacid dehydrogenases | 0 | DIRECT |
| Mechanosensitive channel protein MscS (YggB), middle domain | 0 | DIRECT |
| NADPH-cytochrome p450 reductase-like | 0 | DIRECT |
| LIM domain | 0 | DIRECT |
| Cryptochrome/photolyase, N-terminal domain | 0 | DIRECT |
| DNA polymerase III clamp loader subunits, C-terminal domain | 0 | DIRECT |
| gamma-carbonic anhydrase-like | 0 | DIRECT |
| Macro domain | 0 | DIRECT |
| Hypoxia-inducible factor HIF ihhibitor (FIH1) | 0 | DIRECT |
| Aminomethyltransferase folate-binding domain | 0 | DIRECT |
| Sigma4 domain | 0 | DIRECT |
| CO dehydrogenase flavoprotein N-terminal domain-like | 0 | DIRECT |
| PAH2 domain | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain | 0 | DIRECT |
| Prolyl oligopeptidase, N-terminal domain | 0 | DIRECT |
| Allosteric chorismate mutase | 0 | DIRECT |
| Tim10/DDP | 0 | DIRECT |
| G domain-linked domain | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| Poly A polymerase C-terminal region-like | 0 | DIRECT |
| Adenain-like | 0 | DIRECT |
| Trunk domain of Sec23/24 | 0 | DIRECT |
| RWD domain | 0 | DIRECT |
| CoA-binding domain | 0 | DIRECT |
| PAPS reductase-like | 0 | DIRECT |
| Formyltransferase | 0 | DIRECT |
| (Glycosyl)asparaginase | 0 | DIRECT |
| RuBisCo LSMT catalytic domain | 0 | DIRECT |
| Spermidine synthase | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| MPP-like | 0 | DIRECT |
| Hermes transposase-like | 0 | DIRECT |
| SpoU-like RNA 2'-O ribose methyltransferase | 0 | DIRECT |
| HIT (HINT, histidine triad) family of protein kinase-interacting proteins | 0 | DIRECT |
| Molybdenum cofactor-binding domain | 0 | DIRECT |
| Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
| RNA polymerase II subunit RBP4 (RpoF) | 0 | DIRECT |
| P1 nuclease | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Homoserine dehydrogenase-like | 0 | DIRECT |
| Aldose 1-epimerase (mutarotase) | 0 | DIRECT |
| Pyruvate oxidase and decarboxylase, middle domain | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), intermediate domain | 0 | DIRECT |
| Glycosyl hydrolases family 35 catalytic domain | 0 | DIRECT |
| MSP-like | 0 | DIRECT |
| HAT/Suf repeat | 0 | DIRECT |
| WW domain | 0 | DIRECT |
| UDP-glucose pyrophosphorylase | 0 | DIRECT |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Reductases | 0 | DIRECT |
| E2F dimerization segment | 0 | DIRECT |
| CHY zinc finger | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), apical domain | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| PWWP domain | 0 | DIRECT |
| Serine acetyltransferase | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| Rps19E-like | 0 | DIRECT |
| SBT domain | 0 | DIRECT |
| beta-Phosphoglucomutase-like | 0 | DIRECT |
| HspBP1 domain | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| ZZ domain | 0 | DIRECT |
| Methionine aminopeptidase, insert domain | 0 | DIRECT |
| HCP-like | 0 | DIRECT |
| Peptidyl-tRNA hydrolase II | 0 | DIRECT |
| Glutamine synthetase, N-terminal domain | 0 | DIRECT |
| Nitrogenase iron protein-like | 0 | DIRECT |
| Formate/glycerate dehydrogenases, NAD-domain | 0 | DIRECT |
| 28-residue LRR | 0 | DIRECT |
| GABARAP-like | 0 | DIRECT |
| L30e/L7ae ribosomal proteins | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Poly A polymerase head domain-like | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| PyrH-like | 0 | DIRECT |
| Transcriptional coactivator PC4 C-terminal domain | 0 | DIRECT |
| Mitochondrial glycoprotein MAM33-like | 0 | DIRECT |
| Single-domain sulfurtransferase | 0 | DIRECT |
| PDI-like | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| 3-Methyladenine DNA glycosylase I (Tag) | 0 | DIRECT |
| 5' to 3' exonuclease catalytic domain | 0 | DIRECT |
| La domain | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), catalytic domain | 0 | DIRECT |
| GAF domain | 0 | DIRECT |
| PaaI/YdiI-like | 0 | DIRECT |
| Branched-chain alpha-keto acid dehydrogenase Pyr module | 0 | DIRECT |
| L23p | 0 | DIRECT |
| Zinc hairpin stack | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| Tryptophan biosynthesis enzymes | 0 | DIRECT |
| Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain | 0 | DIRECT |
| Ribosomal proteins L24p and L21e | 0 | DIRECT |
| Gtf glycosyltransferase | 0 | DIRECT |
| Starch-binding domain | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| Ferritin | 0 | DIRECT |
| Myf domain | 0 | DIRECT |
| FAH | 0 | DIRECT |
| Sm motif of small nuclear ribonucleoproteins, SNRNP | 0 | DIRECT |
| Plant stress-induced protein | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| C5 cytosine-specific DNA methylase, DCM | 0 | DIRECT |
| Ribosomal protein S13 | 0 | DIRECT |
| AlkB-like | 0 | DIRECT |
| Ribosomal protein L18 and S11 | 0 | DIRECT |
| Hypothetical protein HI1317 | 0 | DIRECT |
| Carboxylesterase/thioesterase 1 | 0 | DIRECT |
| Ubiquitin carboxyl-terminal hydrolase UCH-L | 0 | DIRECT |
| Prokaryotic type KH domain (KH-domain type II) | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| Release factor | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| Putative glucosidase YicI, domain 3 | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| rRNA adenine dimethylase-like | 0 | DIRECT |
| Pyruvate oxidase and decarboxylase Pyr module | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| LysM domain | 0 | DIRECT |
| Glucose 6-phosphate dehydrogenase-like | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| SWIRM domain | 0 | DIRECT |
| NOL1/NOP2/sun | 0 | DIRECT |
| Subtilase propeptides/inhibitors | 0 | DIRECT |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
| Retrovirus zinc finger-like domains | 0 | DIRECT |
| RNA-polymerase beta-prime | 0 | DIRECT |
| Chalcone isomerase | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| Cytidylyltransferase | 0 | DIRECT |
| HEAT repeat | 0 | DIRECT |
| Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| Glycerol-3-phosphate transporter | 0 | DIRECT |
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain | 0 | DIRECT |
| Chromo barrel domain | 0 | DIRECT |
| B56-like | 0 | DIRECT |
| Amidase signature (AS) enzymes | 0 | DIRECT |
| Ribosomal S5 protein, N-terminal domain | 0 | DIRECT |
| Enolase N-terminal domain-like | 0 | DIRECT |
| Ribosomal protein S27e | 0 | DIRECT |
| Ribosomal protein L10e | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| BAR domain | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| DNA polymerase processivity factor | 0 | DIRECT |
| Cystatins | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| Ribosomal protein S15 | 0 | DIRECT |
| RNase III catalytic domain-like | 0 | DIRECT |
| Diacylglycerol kinase-like | 0 | DIRECT |
| LON domain-like | 0 | DIRECT |
| Rubredoxin | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| beta-Galactosidase/glucuronidase, N-terminal domain | 0 | DIRECT |
| Prefoldin | 0 | DIRECT |
| ATP sulfurylase N-terminal domain | 0 | DIRECT |
| Glutamine synthetase catalytic domain | 0 | DIRECT |
| SAM (sterile alpha motif) domain | 0 | DIRECT |
| MIF-related | 0 | DIRECT |
| Ran-binding domain | 0 | DIRECT |
| PAZ domain | 0 | DIRECT |
| DNA repair protein MutS, domain I | 0 | DIRECT |
| Creatinase/aminopeptidase | 0 | DIRECT |
| Class-II DAHP synthetase | 0 | DIRECT |
| beta-N-acetylhexosaminidase catalytic domain | 0 | DIRECT |
| Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| Smr domain | 0 | DIRECT |
| Eps15 homology domain (EH domain) | 0 | DIRECT |
| SerA intervening domain-like | 0 | DIRECT |
| Ring hydroxylating alpha subunit ISP domain | 0 | DIRECT |
| Ribosomal protein L5 | 0 | DIRECT |
| Hypothetical protein TM1112 | 0 | DIRECT |
| Receiver domain of the ethylene receptor | 0 | DIRECT |
| Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| 4HBT-like | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| Clp protease, ClpP subunit | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| UBX domain | 0 | DIRECT |
| Aspartokinase allosteric domain-like | 0 | DIRECT |
| RNA methyltransferase FtsJ | 0 | DIRECT |
| Choline kinase | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| Class II glutamine amidotransferases | 0 | DIRECT |
| Sec1/munc18-like (SM) proteins | 0 | DIRECT |
| RNB domain-like | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| 5' nucleotidase-like | 0 | DIRECT |
| Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
| 6-phosphogluconate dehydrogenase-like, N-terminal domain | 0 | DIRECT |
| Branched-chain alpha-keto acid dehydrogenase PP module | 0 | DIRECT |
| Linker histone H1/H5 | 0 | DIRECT |
| MYND zinc finger | 0 | DIRECT |
| CO dehydrogenase molybdoprotein N-domain-like | 0 | DIRECT |
| Ribonuclease Rh-like | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| Formate/glycerate dehydrogenases, substrate-binding domain | 0 | DIRECT |
| Acyl-ACP thioesterase-like | 0 | DIRECT |
| HD domain | 0 | DIRECT |
| alpha-Amylases, C-terminal beta-sheet domain | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| Ribosomal protein S10 | 0 | DIRECT |
| Trehalose-6-phosphate synthase, OtsA | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| CAF1-like ribonuclease | 0 | DIRECT |
| ATP-dependent DNA ligase catalytic domain | 0 | DIRECT |
| Ran binding protein zinc finger-like | 0 | DIRECT |
| Dihydrodipicolinate reductase-like | 0 | DIRECT |
| DJ-1/PfpI | 0 | DIRECT |
| GAT domain | 0 | DIRECT |
| Neurolysin-like | 0 | DIRECT |
| Pseudouridine synthase I TruA | 0 | DIRECT |
| Lesion bypass DNA polymerase (Y-family), catalytic domain | 0 | DIRECT |
| Enolase | 0 | DIRECT |
| Elongation factor TFIIS domain 2 | 0 | DIRECT |
| LplA-like | 0 | DIRECT |
| NadC N-terminal domain-like | 0 | DIRECT |
| RNase Z-like | 0 | DIRECT |
| The spindle assembly checkpoint protein mad2 | 0 | DIRECT |
| PX domain | 0 | DIRECT |
| CO dehydrogenase ISP C-domain like | 0 | DIRECT |
| Adenosine-5'phosphosulfate kinase (APS kinase) | 0 | DIRECT |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
| CO dehydrogenase flavoprotein C-terminal domain-like | 0 | DIRECT |
| AMPK-beta glycogen binding domain-like | 0 | DIRECT |
| Inorganic pyrophosphatase | 0 | DIRECT |
| Tail specific protease, catalytic domain | 0 | DIRECT |
| NifU C-terminal domain-like | 0 | DIRECT |
| Glyoxalase I (lactoylglutathione lyase) | 0 | DIRECT |
| Homodimeric domain of signal transducing histidine kinase | 0 | DIRECT |
| Folylpolyglutamate synthetase | 0 | DIRECT |
| Sec63 C-terminal domain-like | 0 | DIRECT |
| Galactosyltransferase LgtC | 0 | DIRECT |
| RelA/SpoT domain | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| GroES | 0 | DIRECT |
| PsbP-like | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| Deoxycytidylate deaminase-like | 0 | DIRECT |
| Class I alpha-1;2-mannosidase, catalytic domain | 0 | DIRECT |
| YicI catalytic domain-like | 0 | DIRECT |
| Smc hinge domain | 0 | DIRECT |
| PNP-oxidase like | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| Cdc48 N-terminal domain-like | 0 | DIRECT |
| monodomain cytochrome c | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| GroEL-like chaperone, intermediate domain | 0 | DIRECT |
| Ribosomal proteins L15p and L18e | 0 | DIRECT |
| Ribosomal protein L19 | 0 | DIRECT |
| LEA14-like | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), ATPase domain | 0 | DIRECT |
| BEACH domain | 0 | DIRECT |
| Cytochrome b5 | 0 | DIRECT |
| AF1104-like | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| Cytochrome p450 reductase N-terminal domain-like | 0 | DIRECT |
| ARID domain | 0 | DIRECT |
| N-type ATP pyrophosphatases | 0 | DIRECT |
| IPP isomerase-like | 0 | DIRECT |
| BSD domain | 0 | DIRECT |
| Prolyl oligopeptidase, C-terminal domain | 0 | DIRECT |
| beta-carbonic anhydrase, cab | 0 | DIRECT |
| Thioredoxin-like 2Fe-2S ferredoxin | 0 | DIRECT |
| Thiolase-related | 0 | DIRECT |
| Shikimate kinase (AroK) | 0 | DIRECT |
| Signal peptide-binding domain | 0 | DIRECT |
| Ribosomal protein L1 | 0 | DIRECT |
| D-ribulose-5-phosphate 3-epimerase | 0 | DIRECT |
| PA domain | 0 | DIRECT |
| Exostosin | 0 | DIRECT |
| Plus3 | 0 | DIRECT |
| NadC C-terminal domain-like | 0 | DIRECT |
| Pyruvate oxidase and decarboxylase PP module | 0 | DIRECT |
| Nucleoside diphosphate kinase, NDK | 0 | DIRECT |
| D-aminoacid aminotransferase-like PLP-dependent enzymes | 0 | DIRECT |
| 2Fe-2S ferredoxin-related | 0 | DIRECT |
| Sedlin (SEDL) | 0 | DIRECT |
| Chromo domain | 0 | DIRECT |
| Histidine kinase | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Ribosomal protein L3 | 0 | DIRECT |
| VHS domain | 0 | DIRECT |
| Pseudouridine synthase RsuA/RluD | 0 | DIRECT |
| Plant transcriptional regulator PBF-2 | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| Bacterial exopeptidase dimerisation domain | 0 | DIRECT |
| Poly(ADP-ribose) polymerase, C-terminal domain | 0 | DIRECT |
| Phosphofructokinase | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| CAT-like | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| Class I aldolase | 0 | DIRECT |
| Ribonuclease PH domain 2-like | 0 | DIRECT |
| Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | DIRECT |
| FucT-like | 0 | DIRECT |
| FHA domain | 0 | DIRECT |
| Calnexin/calreticulin | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | DIRECT |
| Pyridoxal-dependent decarboxylase | 0 | DIRECT |
| MutT-like | 0 | DIRECT |
| WrbA-like | 0 | DIRECT |
| GDI-like N domain | 0 | DIRECT |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
| GroEL chaperone, ATPase domain | 0 | DIRECT |
| Hypothetical protein At2g34160 | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| BphP N-terminal domain-like | 0 | DIRECT |
| BC ATP-binding domain-like | 0 | DIRECT |
| Isochorismatase-like hydrolases | 0 | DIRECT |
| NLI interacting factor-like phosphatase | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| STAR domain | 0 | DIRECT |
| Biotinyl/lipoyl-carrier proteins and domains | 0 | DIRECT |
| Translational machinery components | 0 | DIRECT |
| DnaJ/Hsp40 cysteine-rich domain | 0 | DIRECT |
| SOUL heme-binding protein | 0 | DIRECT |
| PhzC/PhzF-like | 0 | DIRECT |
| HMG-box | 0 | DIRECT |
| Methyl-CpG-binding domain, MBD | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| ATP sulfurylase catalytic domain | 0 | DIRECT |
| Cell cycle arrest protein BUB3 | 0 | DIRECT |
| PUA domain | 0 | DIRECT |
| PCI domain (PINT motif) | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| BC N-terminal domain-like | 0 | DIRECT |
| N-acetyl-l-glutamate kinase | 0 | DIRECT |
| RhoGDI-like | 0 | DIRECT |
| HAL/PAL-like | 0 | DIRECT |
| Phytochrome-specific domain | 0 | DIRECT |
| ATP-dependent DNA ligase DNA-binding domain | 0 | DIRECT |
| Biotin dependent carboxylase carboxyltransferase domain | 0 | DIRECT |
| Ribosomal protein L37e | 0 | DIRECT |
| EDF1-like | 0 | DIRECT |
| YhbY-like | 0 | DIRECT |
| RplX-like | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | DIRECT |
| TRM1-like | 0 | DIRECT |
| Pentapeptide repeats | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| Cofactor-dependent phosphoglycerate mutase | 0 | DIRECT |
| FKBP immunophilin/proline isomerase | 0 | DIRECT |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| Double-stranded RNA-binding domain (dsRBD) | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| BC C-terminal domain-like | 0 | DIRECT |
| Ubiquitin activating enzymes (UBA) | 0 | DIRECT |
| beta-sandwich domain of Sec23/24 | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| Oxygen-evolving enhancer protein 3, | 0 | DIRECT |
| DNA ligase/mRNA capping enzyme postcatalytic domain | 0 | DIRECT |
| Malic enzyme N-domain | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain | 0 | DIRECT |
| Molybdenum cofactor biosynthesis protein MoeB | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| NADPH-cytochrome p450 reductase FAD-binding domain-like | 0 | DIRECT |
| Leukotriene A4 hydrolase catalytic domain | 0 | DIRECT |
| ATP-dependent protease Lon (La), catalytic domain | 0 | DIRECT |
| Protein prenyltransferases | 0 | DIRECT |
| RNA-polymerase beta | 0 | DIRECT |
| Sec63 N-terminal domain | 0 | DIRECT |
| Ribosomal protein L7/12, C-terminal domain | 0 | DIRECT |
| YicI N-terminal domain-like | 0 | DIRECT |
| WD40-repeat | 0.0003885 | DIRECT |
| Canonical RBD | 0.001646 | INHERITED FROM: D bilateral stage || F mature embryo stage || E expanded cotyledon stage |
| Tandem AAA-ATPase domain | 0.0146 | INHERITED FROM: D bilateral stage || E expanded cotyledon stage |
| PHD domain | 0.02265 | INHERITED FROM: E expanded cotyledon stage |
| Cold shock DNA-binding domain-like | 0.1398 | INHERITED FROM: D bilateral stage || F mature embryo stage || E expanded cotyledon stage |
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| GroEL-like chaperone, apical domain | 0 | Direct |
| DNA repair glycosylase, 2 C-terminal domains | 0 | Direct |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| Cystathionine synthase-like | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| FF domain | 0 | Direct |
| IF2B-like | 0 | Direct |
| EF-G/eEF-2 domains III and V | 0 | Direct |
| Clathrin coat assembly domain | 0 | Direct |
| Cyclophilin (peptidylprolyl isomerase) | 0 | Direct |
| GAPDH-like | 0 | Direct |
| Pseudouridine synthase II TruB | 0 | Direct |
| Heme-dependent catalases | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
| Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain | 0 | Direct |
| DNase I-like | 0 | Direct |
| Glycerol-3-phosphate dehydrogenase | 0 | Direct |
| Aminoacid dehydrogenases | 0 | Direct |
| Mechanosensitive channel protein MscS (YggB), middle domain | 0 | Direct |
| NADPH-cytochrome p450 reductase-like | 0 | Direct |
| LIM domain | 0 | Direct |
| Cryptochrome/photolyase, N-terminal domain | 0 | Direct |
| DNA polymerase III clamp loader subunits, C-terminal domain | 0 | Direct |
| gamma-carbonic anhydrase-like | 0 | Direct |
| Macro domain | 0 | Direct |
| Hypoxia-inducible factor HIF ihhibitor (FIH1) | 0 | Direct |
| Aminomethyltransferase folate-binding domain | 0 | Direct |
| Sigma4 domain | 0 | Direct |
| CO dehydrogenase flavoprotein N-terminal domain-like | 0 | Direct |
| PAH2 domain | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain | 0 | Direct |
| Prolyl oligopeptidase, N-terminal domain | 0 | Direct |
| Allosteric chorismate mutase | 0 | Direct |
| Tim10/DDP | 0 | Direct |
| G domain-linked domain | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| Poly A polymerase C-terminal region-like | 0 | Direct |
| Adenain-like | 0 | Direct |
| Trunk domain of Sec23/24 | 0 | Direct |
| RWD domain | 0 | Direct |
| CoA-binding domain | 0 | Direct |
| PAPS reductase-like | 0 | Direct |
| Formyltransferase | 0 | Direct |
| (Glycosyl)asparaginase | 0 | Direct |
| RuBisCo LSMT catalytic domain | 0 | Direct |
| Spermidine synthase | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| MPP-like | 0 | Direct |
| Hermes transposase-like | 0 | Direct |
| SpoU-like RNA 2'-O ribose methyltransferase | 0 | Direct |
| HIT (HINT, histidine triad) family of protein kinase-interacting proteins | 0 | Direct |
| Molybdenum cofactor-binding domain | 0 | Direct |
| Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
| RNA polymerase II subunit RBP4 (RpoF) | 0 | Direct |
| P1 nuclease | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Homoserine dehydrogenase-like | 0 | Direct |
| Aldose 1-epimerase (mutarotase) | 0 | Direct |
| Pyruvate oxidase and decarboxylase, middle domain | 0 | Direct |
| Group II chaperonin (CCT, TRIC), intermediate domain | 0 | Direct |
| Glycosyl hydrolases family 35 catalytic domain | 0 | Direct |
| MSP-like | 0 | Direct |
| HAT/Suf repeat | 0 | Direct |
| WW domain | 0 | Direct |
| UDP-glucose pyrophosphorylase | 0 | Direct |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Reductases | 0 | Direct |
| E2F dimerization segment | 0 | Direct |
| CHY zinc finger | 0 | Direct |
| Group II chaperonin (CCT, TRIC), apical domain | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| PWWP domain | 0 | Direct |
| Serine acetyltransferase | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| Rps19E-like | 0 | Direct |
| SBT domain | 0 | Direct |
| beta-Phosphoglucomutase-like | 0 | Direct |
| HspBP1 domain | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| ZZ domain | 0 | Direct |
| Methionine aminopeptidase, insert domain | 0 | Direct |
| HCP-like | 0 | Direct |
| Peptidyl-tRNA hydrolase II | 0 | Direct |
| Glutamine synthetase, N-terminal domain | 0 | Direct |
| Nitrogenase iron protein-like | 0 | Direct |
| Formate/glycerate dehydrogenases, NAD-domain | 0 | Direct |
| 28-residue LRR | 0 | Direct |
| GABARAP-like | 0 | Direct |
| L30e/L7ae ribosomal proteins | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Poly A polymerase head domain-like | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| PyrH-like | 0 | Direct |
| Transcriptional coactivator PC4 C-terminal domain | 0 | Direct |
| Mitochondrial glycoprotein MAM33-like | 0 | Direct |
| Single-domain sulfurtransferase | 0 | Direct |
| PDI-like | 0 | Direct |
| HesB-like domain | 0 | Direct |
| 3-Methyladenine DNA glycosylase I (Tag) | 0 | Direct |
| 5' to 3' exonuclease catalytic domain | 0 | Direct |
| La domain | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), catalytic domain | 0 | Direct |
| GAF domain | 0 | Direct |
| PaaI/YdiI-like | 0 | Direct |
| Branched-chain alpha-keto acid dehydrogenase Pyr module | 0 | Direct |
| L23p | 0 | Direct |
| Zinc hairpin stack | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| Tryptophan biosynthesis enzymes | 0 | Direct |
| Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain | 0 | Direct |
| Ribosomal proteins L24p and L21e | 0 | Direct |
| Gtf glycosyltransferase | 0 | Direct |
| Starch-binding domain | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| Ferritin | 0 | Direct |
| Myf domain | 0 | Direct |
| FAH | 0 | Direct |
| Sm motif of small nuclear ribonucleoproteins, SNRNP | 0 | Direct |
| Plant stress-induced protein | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| C5 cytosine-specific DNA methylase, DCM | 0 | Direct |
| Ribosomal protein S13 | 0 | Direct |
| AlkB-like | 0 | Direct |
| Ribosomal protein L18 and S11 | 0 | Direct |
| Hypothetical protein HI1317 | 0 | Direct |
| Carboxylesterase/thioesterase 1 | 0 | Direct |
| Ubiquitin carboxyl-terminal hydrolase UCH-L | 0 | Direct |
| Prokaryotic type KH domain (KH-domain type II) | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| Release factor | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| Putative glucosidase YicI, domain 3 | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| rRNA adenine dimethylase-like | 0 | Direct |
| Pyruvate oxidase and decarboxylase Pyr module | 0 | Direct |
| SH3-domain | 0 | Direct |
| LysM domain | 0 | Direct |
| Glucose 6-phosphate dehydrogenase-like | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| SWIRM domain | 0 | Direct |
| NOL1/NOP2/sun | 0 | Direct |
| Subtilase propeptides/inhibitors | 0 | Direct |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
| Retrovirus zinc finger-like domains | 0 | Direct |
| RNA-polymerase beta-prime | 0 | Direct |
| Chalcone isomerase | 0 | Direct |
| R3H domain | 0 | Direct |
| Cytidylyltransferase | 0 | Direct |
| HEAT repeat | 0 | Direct |
| Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | Direct |
| RraA-like | 0 | Direct |
| Glycerol-3-phosphate transporter | 0 | Direct |
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain | 0 | Direct |
| Chromo barrel domain | 0 | Direct |
| B56-like | 0 | Direct |
| Amidase signature (AS) enzymes | 0 | Direct |
| Ribosomal S5 protein, N-terminal domain | 0 | Direct |
| Enolase N-terminal domain-like | 0 | Direct |
| Ribosomal protein S27e | 0 | Direct |
| Ribosomal protein L10e | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| BAR domain | 0 | Direct |
| RibA-like | 0 | Direct |
| DNA polymerase processivity factor | 0 | Direct |
| Cystatins | 0 | Direct |
| BolA-like | 0 | Direct |
| Ribosomal protein S15 | 0 | Direct |
| RNase III catalytic domain-like | 0 | Direct |
| Diacylglycerol kinase-like | 0 | Direct |
| LON domain-like | 0 | Direct |
| Rubredoxin | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| beta-Galactosidase/glucuronidase, N-terminal domain | 0 | Direct |
| Prefoldin | 0 | Direct |
| ATP sulfurylase N-terminal domain | 0 | Direct |
| Glutamine synthetase catalytic domain | 0 | Direct |
| SAM (sterile alpha motif) domain | 0 | Direct |
| MIF-related | 0 | Direct |
| Ran-binding domain | 0 | Direct |
| PAZ domain | 0 | Direct |
| DNA repair protein MutS, domain I | 0 | Direct |
| Creatinase/aminopeptidase | 0 | Direct |
| Class-II DAHP synthetase | 0 | Direct |
| beta-N-acetylhexosaminidase catalytic domain | 0 | Direct |
| Peptidyl-tRNA hydrolase-like | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| Smr domain | 0 | Direct |
| Eps15 homology domain (EH domain) | 0 | Direct |
| SerA intervening domain-like | 0 | Direct |
| Ring hydroxylating alpha subunit ISP domain | 0 | Direct |
| Ribosomal protein L5 | 0 | Direct |
| Hypothetical protein TM1112 | 0 | Direct |
| Receiver domain of the ethylene receptor | 0 | Direct |
| Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| 4HBT-like | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| Clp protease, ClpP subunit | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| UBX domain | 0 | Direct |
| Aspartokinase allosteric domain-like | 0 | Direct |
| RNA methyltransferase FtsJ | 0 | Direct |
| Choline kinase | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| Class II glutamine amidotransferases | 0 | Direct |
| Sec1/munc18-like (SM) proteins | 0 | Direct |
| RNB domain-like | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| 5' nucleotidase-like | 0 | Direct |
| Ribosomal protein L11, C-terminal domain | 0 | Direct |
| 6-phosphogluconate dehydrogenase-like, N-terminal domain | 0 | Direct |
| Branched-chain alpha-keto acid dehydrogenase PP module | 0 | Direct |
| Linker histone H1/H5 | 0 | Direct |
| MYND zinc finger | 0 | Direct |
| CO dehydrogenase molybdoprotein N-domain-like | 0 | Direct |
| Ribonuclease Rh-like | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| Formate/glycerate dehydrogenases, substrate-binding domain | 0 | Direct |
| Acyl-ACP thioesterase-like | 0 | Direct |
| HD domain | 0 | Direct |
| alpha-Amylases, C-terminal beta-sheet domain | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| Ribosomal protein S10 | 0 | Direct |
| Trehalose-6-phosphate synthase, OtsA | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| CAF1-like ribonuclease | 0 | Direct |
| ATP-dependent DNA ligase catalytic domain | 0 | Direct |
| Ran binding protein zinc finger-like | 0 | Direct |
| Dihydrodipicolinate reductase-like | 0 | Direct |
| DJ-1/PfpI | 0 | Direct |
| GAT domain | 0 | Direct |
| Neurolysin-like | 0 | Direct |
| Pseudouridine synthase I TruA | 0 | Direct |
| Lesion bypass DNA polymerase (Y-family), catalytic domain | 0 | Direct |
| Enolase | 0 | Direct |
| Elongation factor TFIIS domain 2 | 0 | Direct |
| LplA-like | 0 | Direct |
| NadC N-terminal domain-like | 0 | Direct |
| RNase Z-like | 0 | Direct |
| The spindle assembly checkpoint protein mad2 | 0 | Direct |
| PX domain | 0 | Direct |
| CO dehydrogenase ISP C-domain like | 0 | Direct |
| Adenosine-5'phosphosulfate kinase (APS kinase) | 0 | Direct |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
| CO dehydrogenase flavoprotein C-terminal domain-like | 0 | Direct |
| AMPK-beta glycogen binding domain-like | 0 | Direct |
| Inorganic pyrophosphatase | 0 | Direct |
| Tail specific protease, catalytic domain | 0 | Direct |
| NifU C-terminal domain-like | 0 | Direct |
| Glyoxalase I (lactoylglutathione lyase) | 0 | Direct |
| Homodimeric domain of signal transducing histidine kinase | 0 | Direct |
| Folylpolyglutamate synthetase | 0 | Direct |
| Sec63 C-terminal domain-like | 0 | Direct |
| Galactosyltransferase LgtC | 0 | Direct |
| RelA/SpoT domain | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| GroES | 0 | Direct |
| PsbP-like | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| Deoxycytidylate deaminase-like | 0 | Direct |
| Class I alpha-1;2-mannosidase, catalytic domain | 0 | Direct |
| YicI catalytic domain-like | 0 | Direct |
| Smc hinge domain | 0 | Direct |
| PNP-oxidase like | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| Cdc48 N-terminal domain-like | 0 | Direct |
| monodomain cytochrome c | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| GroEL-like chaperone, intermediate domain | 0 | Direct |
| Ribosomal proteins L15p and L18e | 0 | Direct |
| Ribosomal protein L19 | 0 | Direct |
| LEA14-like | 0 | Direct |
| Group II chaperonin (CCT, TRIC), ATPase domain | 0 | Direct |
| BEACH domain | 0 | Direct |
| Cytochrome b5 | 0 | Direct |
| AF1104-like | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| Cytochrome p450 reductase N-terminal domain-like | 0 | Direct |
| ARID domain | 0 | Direct |
| N-type ATP pyrophosphatases | 0 | Direct |
| IPP isomerase-like | 0 | Direct |
| BSD domain | 0 | Direct |
| Prolyl oligopeptidase, C-terminal domain | 0 | Direct |
| beta-carbonic anhydrase, cab | 0 | Direct |
| Thioredoxin-like 2Fe-2S ferredoxin | 0 | Direct |
| Thiolase-related | 0 | Direct |
| Shikimate kinase (AroK) | 0 | Direct |
| Signal peptide-binding domain | 0 | Direct |
| Ribosomal protein L1 | 0 | Direct |
| D-ribulose-5-phosphate 3-epimerase | 0 | Direct |
| PA domain | 0 | Direct |
| Exostosin | 0 | Direct |
| Plus3 | 0 | Direct |
| NadC C-terminal domain-like | 0 | Direct |
| Pyruvate oxidase and decarboxylase PP module | 0 | Direct |
| Nucleoside diphosphate kinase, NDK | 0 | Direct |
| D-aminoacid aminotransferase-like PLP-dependent enzymes | 0 | Direct |
| 2Fe-2S ferredoxin-related | 0 | Direct |
| Sedlin (SEDL) | 0 | Direct |
| Chromo domain | 0 | Direct |
| Histidine kinase | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| Ribosomal protein L3 | 0 | Direct |
| VHS domain | 0 | Direct |
| Pseudouridine synthase RsuA/RluD | 0 | Direct |
| Plant transcriptional regulator PBF-2 | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| Bacterial exopeptidase dimerisation domain | 0 | Direct |
| Poly(ADP-ribose) polymerase, C-terminal domain | 0 | Direct |
| Phosphofructokinase | 0 | Direct |
| NHL repeat | 0 | Direct |
| CAT-like | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| Class I aldolase | 0 | Direct |
| Ribonuclease PH domain 2-like | 0 | Direct |
| Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | Direct |
| FucT-like | 0 | Direct |
| FHA domain | 0 | Direct |
| Calnexin/calreticulin | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | Direct |
| Pyridoxal-dependent decarboxylase | 0 | Direct |
| MutT-like | 0 | Direct |
| WrbA-like | 0 | Direct |
| GDI-like N domain | 0 | Direct |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
| GroEL chaperone, ATPase domain | 0 | Direct |
| Hypothetical protein At2g34160 | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| BphP N-terminal domain-like | 0 | Direct |
| BC ATP-binding domain-like | 0 | Direct |
| Isochorismatase-like hydrolases | 0 | Direct |
| NLI interacting factor-like phosphatase | 0 | Direct |
| eIF1-like | 0 | Direct |
| STAR domain | 0 | Direct |
| Biotinyl/lipoyl-carrier proteins and domains | 0 | Direct |
| Translational machinery components | 0 | Direct |
| DnaJ/Hsp40 cysteine-rich domain | 0 | Direct |
| SOUL heme-binding protein | 0 | Direct |
| PhzC/PhzF-like | 0 | Direct |
| HMG-box | 0 | Direct |
| Methyl-CpG-binding domain, MBD | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| ATP sulfurylase catalytic domain | 0 | Direct |
| Cell cycle arrest protein BUB3 | 0 | Direct |
| PUA domain | 0 | Direct |
| PCI domain (PINT motif) | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| BC N-terminal domain-like | 0 | Direct |
| N-acetyl-l-glutamate kinase | 0 | Direct |
| RhoGDI-like | 0 | Direct |
| HAL/PAL-like | 0 | Direct |
| Phytochrome-specific domain | 0 | Direct |
| ATP-dependent DNA ligase DNA-binding domain | 0 | Direct |
| Biotin dependent carboxylase carboxyltransferase domain | 0 | Direct |
| Ribosomal protein L37e | 0 | Direct |
| EDF1-like | 0 | Direct |
| YhbY-like | 0 | Direct |
| RplX-like | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | Direct |
| TRM1-like | 0 | Direct |
| Pentapeptide repeats | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| Cofactor-dependent phosphoglycerate mutase | 0 | Direct |
| FKBP immunophilin/proline isomerase | 0 | Direct |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| Double-stranded RNA-binding domain (dsRBD) | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| BC C-terminal domain-like | 0 | Direct |
| Ubiquitin activating enzymes (UBA) | 0 | Direct |
| beta-sandwich domain of Sec23/24 | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| Oxygen-evolving enhancer protein 3, | 0 | Direct |
| DNA ligase/mRNA capping enzyme postcatalytic domain | 0 | Direct |
| Malic enzyme N-domain | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain | 0 | Direct |
| Molybdenum cofactor biosynthesis protein MoeB | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| NADPH-cytochrome p450 reductase FAD-binding domain-like | 0 | Direct |
| Leukotriene A4 hydrolase catalytic domain | 0 | Direct |
| ATP-dependent protease Lon (La), catalytic domain | 0 | Direct |
| Protein prenyltransferases | 0 | Direct |
| RNA-polymerase beta | 0 | Direct |
| Sec63 N-terminal domain | 0 | Direct |
| Ribosomal protein L7/12, C-terminal domain | 0 | Direct |
| YicI N-terminal domain-like | 0 | Direct |
| WD40-repeat | 0.0003885 | Direct |
| Canonical RBD | 0.001646 | Inherited |
| Tandem AAA-ATPase domain | 0.0146 | Inherited |
| PHD domain | 0.02265 | Inherited |
| Cold shock DNA-binding domain-like | 0.1398 | Inherited |
LINKTO: Domain2BO Download and Domain2BO Algorithm
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Supra-domain (Single)( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| HIT-like | 0 | DIRECT |
| Amidase signature (AS) enzymes | 0 | DIRECT |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
| HIT/MYND zinc finger-like | 0 | DIRECT |
| Alpha-L RNA-binding motif | 0 | DIRECT |
| Pseudouridine synthase | 0 | DIRECT |
| PAH2 domain | 0 | DIRECT |
| Heme oxygenase-like | 0 | DIRECT |
| Diaminopimelate epimerase-like | 0 | DIRECT |
| Ribosomal L27 protein-like | 0 | DIRECT |
| Heme-dependent catalase-like | 0 | DIRECT |
| DnaJ/Hsp40 cysteine-rich domain | 0 | DIRECT |
| CO dehydrogenase flavoprotein C-terminal domain-like | 0 | DIRECT |
| alpha/beta knot | 0 | DIRECT |
| SBT domain | 0 | DIRECT |
| Endosomal sorting complex assembly domain | 0 | DIRECT |
| SAM/Pointed domain | 0 | DIRECT |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
| Creatinase/prolidase N-terminal domain | 0 | DIRECT |
| Macro domain-like | 0 | DIRECT |
| FAH | 0 | DIRECT |
| Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| DNA ligase/mRNA capping enzyme, catalytic domain | 0 | DIRECT |
| Radical SAM enzymes | 0 | DIRECT |
| Ribonuclease Rh-like | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| dsRNA-binding domain-like | 0 | DIRECT |
| Carbamate kinase-like | 0 | DIRECT |
| Sm-like ribonucleoproteins | 0 | DIRECT |
| Globin-like | 0 | DIRECT |
| DNA clamp | 0 | DIRECT |
| ClpS-like | 0 | DIRECT |
| Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
| Mitochondrial glycoprotein MAM33-like | 0 | DIRECT |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | DIRECT |
| Inorganic pyrophosphatase | 0 | DIRECT |
| DHS-like NAD/FAD-binding domain | 0 | DIRECT |
| Sec1/munc18-like (SM) proteins | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| beta-N-acetylhexosaminidase-like domain | 0 | DIRECT |
| Ribosomal proteins L15p and L18e | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| CO dehydrogenase molybdoprotein N-domain-like | 0 | DIRECT |
| PAZ domain | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| Peptidyl-tRNA hydrolase II | 0 | DIRECT |
| YhbY-like | 0 | DIRECT |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | DIRECT |
| Serine metabolism enzymes domain | 0 | DIRECT |
| Nucleoside diphosphate kinase, NDK | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
| Seven-hairpin glycosidases | 0 | DIRECT |
| GroEL equatorial domain-like | 0 | DIRECT |
| Metallo-dependent hydrolases | 0 | DIRECT |
| Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | DIRECT |
| D-aminoacid aminotransferase-like PLP-dependent enzymes | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| LuxS/MPP-like metallohydrolase | 0 | DIRECT |
| YrdC/RibB | 0 | DIRECT |
| HMG-box | 0 | DIRECT |
| Sec63 N-terminal domain-like | 0 | DIRECT |
| ARID-like | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Cyclophilin-like | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| LanC-like | 0 | DIRECT |
| Protease propeptides/inhibitors | 0 | DIRECT |
| DNA repair protein MutS, domain II | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| Probable bacterial effector-binding domain | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| Putative isomerase YbhE | 0 | DIRECT |
| SMR domain-like | 0 | DIRECT |
| beta and beta-prime subunits of DNA dependent RNA-polymerase | 0 | DIRECT |
| Peptidase/esterase 'gauge' domain | 0 | DIRECT |
| Ribosomal protein L1 | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| Glutamine synthetase/guanido kinase | 0 | DIRECT |
| RL5-like | 0 | DIRECT |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
| Carbon-nitrogen hydrolase | 0 | DIRECT |
| Alkaline phosphatase-like | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| E2F-DP heterodimerization region | 0 | DIRECT |
| tRNA-binding arm | 0 | DIRECT |
| Ribulose-phoshate binding barrel | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| AlbA-like | 0 | DIRECT |
| beta-sandwich domain of Sec23/24 | 0 | DIRECT |
| lambda repressor-like DNA-binding domains | 0 | DIRECT |
| Folate-binding domain | 0 | DIRECT |
| BRCT domain | 0 | DIRECT |
| Ricin B-like lectins | 0 | DIRECT |
| PLP-binding barrel | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| BAR/IMD domain-like | 0 | DIRECT |
| CHY zinc finger-like | 0 | DIRECT |
| RplX-like | 0 | DIRECT |
| Pentapeptide repeat-like | 0 | DIRECT |
| MurD-like peptide ligases, catalytic domain | 0 | DIRECT |
| Tim10-like | 0 | DIRECT |
| Dimeric alpha+beta barrel | 0 | DIRECT |
| GroEL-intermediate domain like | 0 | DIRECT |
| BEACH domain | 0 | DIRECT |
| Ribonuclease PH domain 2-like | 0 | DIRECT |
| Aminoacid dehydrogenase-like, N-terminal domain | 0 | DIRECT |
| Elongation factor TFIIS domain 2 | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| LigT-like | 0 | DIRECT |
| AF1104-like | 0 | DIRECT |
| Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| Phosphoglycerate mutase-like | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| Rhodanese/Cell cycle control phosphatase | 0 | DIRECT |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| SIS domain | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| GroEL apical domain-like | 0 | DIRECT |
| Tautomerase/MIF | 0 | DIRECT |
| TATA-box binding protein-like | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| RBP11-like subunits of RNA polymerase | 0 | DIRECT |
| Flavoproteins | 0 | DIRECT |
| Rudiment single hybrid motif | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| Signal peptide-binding domain | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| PapD-like | 0 | DIRECT |
| Zinc hairpin stack | 0 | DIRECT |
| PX domain | 0 | DIRECT |
| DNA repair protein MutS, domain I | 0 | DIRECT |
| Release factor | 0 | DIRECT |
| GINS helical bundle-like | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| FKBP-like | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| Poly A polymerase C-terminal region-like | 0 | DIRECT |
| Chalcone isomerase | 0 | DIRECT |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
| ssDNA-binding transcriptional regulator domain | 0 | DIRECT |
| Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
| SMAD/FHA domain | 0 | DIRECT |
| LysM domain | 0 | DIRECT |
| Single hybrid motif | 0 | DIRECT |
| L9 N-domain-like | 0 | DIRECT |
| Prokaryotic type KH domain (KH-domain type II) | 0 | DIRECT |
| Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
| Cytochrome c | 0 | DIRECT |
| Mog1p/PsbP-like | 0 | DIRECT |
| MurD-like peptide ligases, peptide-binding domain | 0 | DIRECT |
| Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| ADC-like | 0 | DIRECT |
| Glutathione synthetase ATP-binding domain-like | 0 | DIRECT |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
| Oxygen-evolving enhancer protein 3, | 0 | DIRECT |
| Cysteine alpha-hairpin motif | 0 | DIRECT |
| Cryptochrome/photolyase, N-terminal domain | 0 | DIRECT |
| Smc hinge domain | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| PreATP-grasp domain | 0 | DIRECT |
| Homodimeric domain of signal transducing histidine kinase | 0 | DIRECT |
| Electron transport accessory proteins | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| EF-G C-terminal domain-like | 0 | DIRECT |
| Chorismate mutase II | 0 | DIRECT |
| Ran binding protein zinc finger-like | 0 | DIRECT |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| Enolase N-terminal domain-like | 0 | DIRECT |
| Phosphofructokinase | 0 | DIRECT |
| RNase III domain-like | 0 | DIRECT |
| Chelatase | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| Plus3-like | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| Retrovirus zinc finger-like domains | 0 | DIRECT |
| Lipocalins | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| CYTH-like phosphatases | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| PIN domain-like | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| Thioesterase/thiol ester dehydrase-isomerase | 0 | DIRECT |
| GlnB-like | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| BSD domain-like | 0 | DIRECT |
| Formate/glycerate dehydrogenase catalytic domain-like | 0 | DIRECT |
| S15/NS1 RNA-binding domain | 0 | DIRECT |
| Glutamine synthetase, N-terminal domain | 0 | DIRECT |
| beta-carbonic anhydrase, cab | 0 | DIRECT |
| L28p-like | 0 | DIRECT |
| Formyltransferase | 0 | DIRECT |
| HRDC-like | 0 | DIRECT |
| Ribosomal protein L25-like | 0 | DIRECT |
| WW domain | 0 | DIRECT |
| Ribosomal protein L16p/L10e | 0 | DIRECT |
| Prefoldin | 0 | DIRECT |
| Quinoprotein alcohol dehydrogenase-like | 0 | DIRECT |
| Activating enzymes of the ubiquitin-like proteins | 0 | DIRECT |
| ATP-dependent DNA ligase DNA-binding domain | 0 | DIRECT |
| Enolase C-terminal domain-like | 0 | DIRECT |
| S13-like H2TH domain | 0 | DIRECT |
| Ribosomal protein S10 | 0 | DIRECT |
| Caspase-like | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| CO dehydrogenase ISP C-domain like | 0 | DIRECT |
| Phospholipase C/P1 nuclease | 0 | DIRECT |
| post-AAA+ oligomerization domain-like | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| TK C-terminal domain-like | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| Bacterial exopeptidase dimerisation domain | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| Rubredoxin-like | 0 | DIRECT |
| Thiamin diphosphate-binding fold (THDP-binding) | 0 | DIRECT |
| Chromo domain-like | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
| The spindle assembly checkpoint protein mad2 | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
| Creatinase/aminopeptidase | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| FMN-binding split barrel | 0 | DIRECT |
| Molybdenum cofactor-binding domain | 0 | DIRECT |
| MOSC N-terminal domain-like | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
| Isochorismatase-like hydrolases | 0 | DIRECT |
| RNA-binding domain, RBD | 0.0004829 | DIRECT |
| TPR-like | 0.0005198 | DIRECT |
| WD40 repeat-like | 0.001215 | INHERITED FROM: E expanded cotyledon stage |
| ClpP/crotonase | 0.007803 | INHERITED FROM: F mature embryo stage |
| Nucleotidylyl transferase | 0.01089 | INHERITED FROM: F mature embryo stage || D bilateral stage || E expanded cotyledon stage |
| ARM repeat | 0.02264 | INHERITED FROM: F mature embryo stage || D bilateral stage || E expanded cotyledon stage |
| Nucleic acid-binding proteins | 0.05441 | INHERITED FROM: E expanded cotyledon stage |
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| HIT-like | 0 | Direct |
| Amidase signature (AS) enzymes | 0 | Direct |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
| HIT/MYND zinc finger-like | 0 | Direct |
| Alpha-L RNA-binding motif | 0 | Direct |
| Pseudouridine synthase | 0 | Direct |
| PAH2 domain | 0 | Direct |
| Heme oxygenase-like | 0 | Direct |
| Diaminopimelate epimerase-like | 0 | Direct |
| Ribosomal L27 protein-like | 0 | Direct |
| Heme-dependent catalase-like | 0 | Direct |
| DnaJ/Hsp40 cysteine-rich domain | 0 | Direct |
| CO dehydrogenase flavoprotein C-terminal domain-like | 0 | Direct |
| alpha/beta knot | 0 | Direct |
| SBT domain | 0 | Direct |
| Endosomal sorting complex assembly domain | 0 | Direct |
| SAM/Pointed domain | 0 | Direct |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
| Creatinase/prolidase N-terminal domain | 0 | Direct |
| Macro domain-like | 0 | Direct |
| FAH | 0 | Direct |
| Peptidyl-tRNA hydrolase-like | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| DNA ligase/mRNA capping enzyme, catalytic domain | 0 | Direct |
| Radical SAM enzymes | 0 | Direct |
| Ribonuclease Rh-like | 0 | Direct |
| FF domain | 0 | Direct |
| eIF1-like | 0 | Direct |
| dsRNA-binding domain-like | 0 | Direct |
| Carbamate kinase-like | 0 | Direct |
| Sm-like ribonucleoproteins | 0 | Direct |
| Globin-like | 0 | Direct |
| DNA clamp | 0 | Direct |
| ClpS-like | 0 | Direct |
| Expressed protein At2g23090/F21P24.15 | 0 | Direct |
| Mitochondrial glycoprotein MAM33-like | 0 | Direct |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | Direct |
| Inorganic pyrophosphatase | 0 | Direct |
| DHS-like NAD/FAD-binding domain | 0 | Direct |
| Sec1/munc18-like (SM) proteins | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| R3H domain | 0 | Direct |
| beta-N-acetylhexosaminidase-like domain | 0 | Direct |
| Ribosomal proteins L15p and L18e | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| CO dehydrogenase molybdoprotein N-domain-like | 0 | Direct |
| PAZ domain | 0 | Direct |
| BolA-like | 0 | Direct |
| Peptidyl-tRNA hydrolase II | 0 | Direct |
| YhbY-like | 0 | Direct |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | Direct |
| Serine metabolism enzymes domain | 0 | Direct |
| Nucleoside diphosphate kinase, NDK | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| Composite domain of metallo-dependent hydrolases | 0 | Direct |
| Seven-hairpin glycosidases | 0 | Direct |
| GroEL equatorial domain-like | 0 | Direct |
| Metallo-dependent hydrolases | 0 | Direct |
| Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | Direct |
| D-aminoacid aminotransferase-like PLP-dependent enzymes | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| LuxS/MPP-like metallohydrolase | 0 | Direct |
| YrdC/RibB | 0 | Direct |
| HMG-box | 0 | Direct |
| Sec63 N-terminal domain-like | 0 | Direct |
| ARID-like | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Cyclophilin-like | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| LanC-like | 0 | Direct |
| Protease propeptides/inhibitors | 0 | Direct |
| DNA repair protein MutS, domain II | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| Probable bacterial effector-binding domain | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| Putative isomerase YbhE | 0 | Direct |
| SMR domain-like | 0 | Direct |
| beta and beta-prime subunits of DNA dependent RNA-polymerase | 0 | Direct |
| Peptidase/esterase 'gauge' domain | 0 | Direct |
| Ribosomal protein L1 | 0 | Direct |
| RibA-like | 0 | Direct |
| Glutamine synthetase/guanido kinase | 0 | Direct |
| RL5-like | 0 | Direct |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
| Carbon-nitrogen hydrolase | 0 | Direct |
| Alkaline phosphatase-like | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| E2F-DP heterodimerization region | 0 | Direct |
| tRNA-binding arm | 0 | Direct |
| Ribulose-phoshate binding barrel | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| AlbA-like | 0 | Direct |
| beta-sandwich domain of Sec23/24 | 0 | Direct |
| lambda repressor-like DNA-binding domains | 0 | Direct |
| Folate-binding domain | 0 | Direct |
| BRCT domain | 0 | Direct |
| Ricin B-like lectins | 0 | Direct |
| PLP-binding barrel | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| BAR/IMD domain-like | 0 | Direct |
| CHY zinc finger-like | 0 | Direct |
| RplX-like | 0 | Direct |
| Pentapeptide repeat-like | 0 | Direct |
| MurD-like peptide ligases, catalytic domain | 0 | Direct |
| Tim10-like | 0 | Direct |
| Dimeric alpha+beta barrel | 0 | Direct |
| GroEL-intermediate domain like | 0 | Direct |
| BEACH domain | 0 | Direct |
| Ribonuclease PH domain 2-like | 0 | Direct |
| Aminoacid dehydrogenase-like, N-terminal domain | 0 | Direct |
| Elongation factor TFIIS domain 2 | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| SH3-domain | 0 | Direct |
| LigT-like | 0 | Direct |
| AF1104-like | 0 | Direct |
| Ribosomal protein L11, C-terminal domain | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| Phosphoglycerate mutase-like | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| Rhodanese/Cell cycle control phosphatase | 0 | Direct |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| SIS domain | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| GroEL apical domain-like | 0 | Direct |
| Tautomerase/MIF | 0 | Direct |
| TATA-box binding protein-like | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| RBP11-like subunits of RNA polymerase | 0 | Direct |
| Flavoproteins | 0 | Direct |
| Rudiment single hybrid motif | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| Signal peptide-binding domain | 0 | Direct |
| NHL repeat | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| PapD-like | 0 | Direct |
| Zinc hairpin stack | 0 | Direct |
| PX domain | 0 | Direct |
| DNA repair protein MutS, domain I | 0 | Direct |
| Release factor | 0 | Direct |
| GINS helical bundle-like | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| FKBP-like | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| Poly A polymerase C-terminal region-like | 0 | Direct |
| Chalcone isomerase | 0 | Direct |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
| ssDNA-binding transcriptional regulator domain | 0 | Direct |
| Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
| SMAD/FHA domain | 0 | Direct |
| LysM domain | 0 | Direct |
| Single hybrid motif | 0 | Direct |
| L9 N-domain-like | 0 | Direct |
| Prokaryotic type KH domain (KH-domain type II) | 0 | Direct |
| Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
| Cytochrome c | 0 | Direct |
| Mog1p/PsbP-like | 0 | Direct |
| MurD-like peptide ligases, peptide-binding domain | 0 | Direct |
| Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| ADC-like | 0 | Direct |
| Glutathione synthetase ATP-binding domain-like | 0 | Direct |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
| Oxygen-evolving enhancer protein 3, | 0 | Direct |
| Cysteine alpha-hairpin motif | 0 | Direct |
| Cryptochrome/photolyase, N-terminal domain | 0 | Direct |
| Smc hinge domain | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| RraA-like | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| PreATP-grasp domain | 0 | Direct |
| Homodimeric domain of signal transducing histidine kinase | 0 | Direct |
| Electron transport accessory proteins | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| EF-G C-terminal domain-like | 0 | Direct |
| Chorismate mutase II | 0 | Direct |
| Ran binding protein zinc finger-like | 0 | Direct |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| Enolase N-terminal domain-like | 0 | Direct |
| Phosphofructokinase | 0 | Direct |
| RNase III domain-like | 0 | Direct |
| Chelatase | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| Plus3-like | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| Retrovirus zinc finger-like domains | 0 | Direct |
| Lipocalins | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| CYTH-like phosphatases | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| PIN domain-like | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| Thioesterase/thiol ester dehydrase-isomerase | 0 | Direct |
| GlnB-like | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| BSD domain-like | 0 | Direct |
| Formate/glycerate dehydrogenase catalytic domain-like | 0 | Direct |
| S15/NS1 RNA-binding domain | 0 | Direct |
| Glutamine synthetase, N-terminal domain | 0 | Direct |
| beta-carbonic anhydrase, cab | 0 | Direct |
| L28p-like | 0 | Direct |
| Formyltransferase | 0 | Direct |
| HRDC-like | 0 | Direct |
| Ribosomal protein L25-like | 0 | Direct |
| WW domain | 0 | Direct |
| Ribosomal protein L16p/L10e | 0 | Direct |
| Prefoldin | 0 | Direct |
| Quinoprotein alcohol dehydrogenase-like | 0 | Direct |
| Activating enzymes of the ubiquitin-like proteins | 0 | Direct |
| ATP-dependent DNA ligase DNA-binding domain | 0 | Direct |
| Enolase C-terminal domain-like | 0 | Direct |
| S13-like H2TH domain | 0 | Direct |
| Ribosomal protein S10 | 0 | Direct |
| Caspase-like | 0 | Direct |
| HesB-like domain | 0 | Direct |
| CO dehydrogenase ISP C-domain like | 0 | Direct |
| Phospholipase C/P1 nuclease | 0 | Direct |
| post-AAA+ oligomerization domain-like | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| TK C-terminal domain-like | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| Bacterial exopeptidase dimerisation domain | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| Rubredoxin-like | 0 | Direct |
| Thiamin diphosphate-binding fold (THDP-binding) | 0 | Direct |
| Chromo domain-like | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
| The spindle assembly checkpoint protein mad2 | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
| Creatinase/aminopeptidase | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| FMN-binding split barrel | 0 | Direct |
| Molybdenum cofactor-binding domain | 0 | Direct |
| MOSC N-terminal domain-like | 0 | Direct |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
| Isochorismatase-like hydrolases | 0 | Direct |
| RNA-binding domain, RBD | 0.0004829 | Direct |
| TPR-like | 0.0005198 | Direct |
| WD40 repeat-like | 0.001215 | Inherited |
| ClpP/crotonase | 0.007803 | Inherited |
| Nucleotidylyl transferase | 0.01089 | Inherited |
| ARM repeat | 0.02264 | Inherited |
| Nucleic acid-binding proteins | 0.05441 | Inherited |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Duplex) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
81383,54518
81383 - F-box domain
54518 - Tubby C-terminal domain-like | 0 | DIRECT |
69065,54768
69065 - RNase III domain-like
54768 - dsRNA-binding domain-like | 0 | DIRECT |
56176,55447
56176 - FAD-binding/transporter-associated domain-like
55447 - CO dehydrogenase flavoprotein C-terminal domain-like | 0 | DIRECT |
52402,52833
52402 - Adenine nucleotide alpha hydrolases-like
52833 - Thioredoxin-like | 0 | DIRECT |
54368,55931
54368 - Glutamine synthetase, N-terminal domain
55931 - Glutamine synthetase/guanido kinase | 0 | DIRECT |
51338,51556
51338 - Composite domain of metallo-dependent hydrolases
51556 - Metallo-dependent hydrolases | 0 | DIRECT |
50985,50985
50985 - RCC1/BLIP-II
50985 - RCC1/BLIP-II | 0 | DIRECT |
81324,81324
81324 - Voltage-gated potassium channels
81324 - Voltage-gated potassium channels | 0 | DIRECT |
52025,57850
52025 - PA domain
57850 - RING/U-box | 0 | DIRECT |
47895,52540
47895 - Transducin (alpha subunit), insertion domain
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
52440,56059
52440 - PreATP-grasp domain
56059 - Glutathione synthetase ATP-binding domain-like | 0 | DIRECT |
47762,47762
47762 - PAH2 domain
47762 - PAH2 domain | 0 | DIRECT |
54909,54909
54909 - Dimeric alpha+beta barrel
54909 - Dimeric alpha+beta barrel | 0 | DIRECT |
50978,50978
50978 - WD40 repeat-like
50978 - WD40 repeat-like | 0 | DIRECT |
50249,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
47364,52540
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
53633,55021
53633 - Carbamate kinase-like
55021 - ACT-like | 0 | DIRECT |
52518,52518
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52518 - Thiamin diphosphate-binding fold (THDP-binding) | 0 | DIRECT |
46689,51905
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain | 0 | DIRECT |
52047,52047
52047 - RNI-like
52047 - RNI-like | 0 | DIRECT |
52425,48173
52425 - Cryptochrome/photolyase, N-terminal domain
48173 - Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
48592,54849
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like | 0 | DIRECT |
50729,55961
50729 - PH domain-like
55961 - Bet v1-like | 0 | DIRECT |
47473,103506
47473 - EF-hand
103506 - Mitochondrial carrier | 0 | DIRECT |
63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | DIRECT |
57850,57933
57850 - RING/U-box
57933 - TAZ domain | 0 | DIRECT |
50156,52096
50156 - PDZ domain-like
52096 - ClpP/crotonase | 0 | DIRECT |
88798,50249
88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE)
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
53187,55031
53187 - Zn-dependent exopeptidases
55031 - Bacterial exopeptidase dimerisation domain | 0 | DIRECT |
81383,50978
81383 - F-box domain
50978 - WD40 repeat-like | 0 | DIRECT |
55781,55781
55781 - GAF domain-like
55781 - GAF domain-like | 0 | DIRECT |
46785,158702
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
55785,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like | 0 | DIRECT |
47005,52777
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | DIRECT |
55545,51445
55545 - beta-N-acetylhexosaminidase-like domain
51445 - (Trans)glycosidases | 0 | DIRECT |
52087,101576
52087 - CRAL/TRIO domain
101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
55781,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
52743,52025
52743 - Subtilisin-like
52025 - PA domain | 0 | DIRECT |
57850,52540
57850 - RING/U-box
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52540,48340
52540 - P-loop containing nucleoside triphosphate hydrolases
48340 - Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
101690,69065
101690 - PAZ domain
69065 - RNase III domain-like | 0 | DIRECT |
52540,47446
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | DIRECT |
161219,161245
161219 - CHY zinc finger-like
161245 - Zinc hairpin stack | 0 | DIRECT |
53300,81995
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
57850,54928
57850 - RING/U-box
54928 - RNA-binding domain, RBD | 0 | DIRECT |
102848,54236
102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
54236 - Ubiquitin-like | 0 | DIRECT |
75471,75471
75471 - YhbY-like
75471 - YhbY-like | 0 | DIRECT |
49785,49785
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like | 0 | DIRECT |
52540,52317
52540 - P-loop containing nucleoside triphosphate hydrolases
52317 - Class I glutamine amidotransferase-like | 0 | DIRECT |
56112,57850
56112 - Protein kinase-like (PK-like)
57850 - RING/U-box | 0 | DIRECT |
56112,48371
56112 - Protein kinase-like (PK-like)
48371 - ARM repeat | 0 | DIRECT |
109604,81301
109604 - HD-domain/PDEase-like
81301 - Nucleotidyltransferase | 0 | DIRECT |
55785,55785
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
52518,52467
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52467 - DHS-like NAD/FAD-binding domain | 0 | DIRECT |
52172,52172
52172 - CheY-like
52172 - CheY-like | 0 | DIRECT |
50729,81837
50729 - PH domain-like
81837 - BEACH domain | 0 | DIRECT |
81296,52540
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
53738,55957
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
51735,143548
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | DIRECT |
48403,57850
48403 - Ankyrin repeat
57850 - RING/U-box | 0 | DIRECT |
81698,81698
81698 - FF domain
81698 - FF domain | 0 | DIRECT |
47384,55874
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | DIRECT |
101238,46934
101238 - XPC-binding domain
46934 - UBA-like | 0 | DIRECT |
57716,57716
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | DIRECT |
53850,55021
53850 - Periplasmic binding protein-like II
55021 - ACT-like | 0 | DIRECT |
48179,52413
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
58014,51064
58014 - Coiled-coil domain of nucleotide exchange factor GrpE
51064 - Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
57850,46689
57850 - RING/U-box
46689 - Homeodomain-like | 0 | DIRECT |
143548,55021
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | DIRECT |
56524,81296
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0 | DIRECT |
52317,52317
52317 - Class I glutamine amidotransferase-like
52317 - Class I glutamine amidotransferase-like | 0 | DIRECT |
54211,55666
54211 - Ribosomal protein S5 domain 2-like
55666 - Ribonuclease PH domain 2-like | 0 | DIRECT |
81995,81811
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | DIRECT |
81301,81891
81301 - Nucleotidyltransferase
81891 - Poly A polymerase C-terminal region-like | 0 | DIRECT |
54826,51604
54826 - Enolase N-terminal domain-like
51604 - Enolase C-terminal domain-like | 0 | DIRECT |
56059,52210
56059 - Glutathione synthetase ATP-binding domain-like
52210 - Succinyl-CoA synthetase domains | 0 | DIRECT |
57938,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
54171,54171
54171 - DNA-binding domain
54171 - DNA-binding domain | 0 | DIRECT |
51445,49785
51445 - (Trans)glycosidases
49785 - Galactose-binding domain-like | 0 | DIRECT |
54768,54768
54768 - dsRNA-binding domain-like
54768 - dsRNA-binding domain-like | 0 | DIRECT |
50447,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
51230,47005
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
48403,52540
48403 - Ankyrin repeat
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
82199,81822
82199 - SET domain
81822 - RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | DIRECT |
54695,48452
54695 - POZ domain
48452 - TPR-like | 0 | DIRECT |
50249,55681
50249 - Nucleic acid-binding proteins
55681 - Class II aaRS and biotin synthetases | 0 | DIRECT |
46785,144074
46785 - "Winged helix" DNA-binding domain
144074 - E2F-DP heterodimerization region | 0 | DIRECT |
47661,58038
47661 - t-snare proteins
58038 - SNARE fusion complex | 0 | DIRECT |
52540,54211
52540 - P-loop containing nucleoside triphosphate hydrolases
54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
54534,54534
54534 - FKBP-like
54534 - FKBP-like | 0 | DIRECT |
110324,50249
110324 - Ribosomal L27 protein-like
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
81296,51445
81296 - E set domains
51445 - (Trans)glycosidases | 0 | DIRECT |
74650,51445
74650 - Galactose mutarotase-like
51445 - (Trans)glycosidases | 0 | DIRECT |
56091,50249
56091 - DNA ligase/mRNA capping enzyme, catalytic domain
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
161245,57850
161245 - Zinc hairpin stack
57850 - RING/U-box | 0 | DIRECT |
46785,54928
46785 - "Winged helix" DNA-binding domain
54928 - RNA-binding domain, RBD | 0 | DIRECT |
51695,51695
51695 - PLC-like phosphodiesterases
51695 - PLC-like phosphodiesterases | 0 | DIRECT |
46565,57938
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain | 0 | DIRECT |
53383,53383
53383 - PLP-dependent transferases
53383 - PLP-dependent transferases | 0 | DIRECT |
141673,50800
141673 - MOSC N-terminal domain-like
50800 - PK beta-barrel domain-like | 0 | DIRECT |
55821,142695
55821 - YrdC/RibB
142695 - RibA-like | 0 | DIRECT |
53300,57850
53300 - vWA-like
57850 - RING/U-box | 0 | DIRECT |
101908,56219
101908 - Putative isomerase YbhE
56219 - DNase I-like | 0 | DIRECT |
82919,53300
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | DIRECT |
54637,54637
54637 - Thioesterase/thiol ester dehydrase-isomerase
54637 - Thioesterase/thiol ester dehydrase-isomerase | 0 | DIRECT |
57903,57903
57903 - FYVE/PHD zinc finger
57903 - FYVE/PHD zinc finger | 0 | DIRECT |
55021,56112
55021 - ACT-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
53756,56784
53756 - UDP-Glycosyltransferase/glycogen phosphorylase
56784 - HAD-like | 0 | DIRECT |
47741,56176
47741 - CO dehydrogenase ISP C-domain like
56176 - FAD-binding/transporter-associated domain-like | 0 | DIRECT |
56059,51246
56059 - Glutathione synthetase ATP-binding domain-like
51246 - Rudiment single hybrid motif | 0 | DIRECT |
50692,54585
50692 - ADC-like
54585 - Cdc48 domain 2-like | 0 | DIRECT |
46689,46785
46689 - Homeodomain-like
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
88697,52374
88697 - PUA domain-like
52374 - Nucleotidylyl transferase | 0 | DIRECT |
48371,50978
48371 - ARM repeat
50978 - WD40 repeat-like | 0 | DIRECT |
50022,55961
50022 - ISP domain
55961 - Bet v1-like | 0 | DIRECT |
55447,54665
55447 - CO dehydrogenase flavoprotein C-terminal domain-like
54665 - CO dehydrogenase molybdoprotein N-domain-like | 0 | DIRECT |
158702,81296
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | DIRECT |
52283,51735
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains | 0 | DIRECT |
81383,52058
81383 - F-box domain
52058 - L domain-like | 0 | DIRECT |
52540,48403
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | DIRECT |
63737,55486
63737 - Leukotriene A4 hydrolase N-terminal domain
55486 - Metalloproteases ("zincins"), catalytic domain | 0 | DIRECT |
48452,81901
48452 - TPR-like
81901 - HCP-like | 0 | DIRECT |
56672,100879
56672 - DNA/RNA polymerases
100879 - Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
52540,90002
52540 - P-loop containing nucleoside triphosphate hydrolases
90002 - Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
55781,47384
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase | 0 | DIRECT |
54292,47741
54292 - 2Fe-2S ferredoxin-like
47741 - CO dehydrogenase ISP C-domain like | 0 | DIRECT |
56219,56219
56219 - DNase I-like
56219 - DNase I-like | 0 | DIRECT |
57850,49599
57850 - RING/U-box
49599 - TRAF domain-like | 0 | DIRECT |
52540,48019
52540 - P-loop containing nucleoside triphosphate hydrolases
48019 - post-AAA+ oligomerization domain-like | 0 | DIRECT |
117916,117916
117916 - Fe-S cluster assembly (FSCA) domain-like
117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | DIRECT |
51735,48179
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | DIRECT |
64356,49447
64356 - SNARE-like
49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
54791,54791
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
103657,50729
103657 - BAR/IMD domain-like
50729 - PH domain-like | 0 | DIRECT |
47592,159042
47592 - SWIB/MDM2 domain
159042 - Plus3-like | 0 | DIRECT |
81995,82919
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24 | 0 | DIRECT |
57903,55729
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | DIRECT |
158639,63748
158639 - ENT-like
63748 - Tudor/PWWP/MBT | 0 | DIRECT |
100950,75445
100950 - NagB/RpiA/CoA transferase-like
75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
54665,56003
54665 - CO dehydrogenase molybdoprotein N-domain-like
56003 - Molybdenum cofactor-binding domain | 0 | DIRECT |
90209,90209
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like | 0 | DIRECT |
51045,51045
51045 - WW domain
51045 - WW domain | 0 | DIRECT |
54897,52743
54897 - Protease propeptides/inhibitors
52743 - Subtilisin-like | 0 | DIRECT |
54747,46906
54747 - Ribosomal L11/L12e N-terminal domain
46906 - Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
54980,54980
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
82185,82185
82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | DIRECT |
117018,56091
117018 - ATP-dependent DNA ligase DNA-binding domain
56091 - DNA ligase/mRNA capping enzyme, catalytic domain | 0 | DIRECT |
56235,53271
56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
53271 - PRTase-like | 0 | DIRECT |
52540,52058
52540 - P-loop containing nucleoside triphosphate hydrolases
52058 - L domain-like | 0 | DIRECT |
53223,51735
53223 - Aminoacid dehydrogenase-like, N-terminal domain
51735 - NAD(P)-binding Rossmann-fold domains | 0 | DIRECT |
54160,54160
54160 - Chromo domain-like
54160 - Chromo domain-like | 0 | DIRECT |
88946,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
82171,53474
82171 - DPP6 N-terminal domain-like
53474 - alpha/beta-Hydrolases | 0 | DIRECT |
101936,101936
101936 - DNA-binding pseudobarrel domain
101936 - DNA-binding pseudobarrel domain | 0 | DIRECT |
54928,57756
54928 - RNA-binding domain, RBD
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
52518,52922
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52922 - TK C-terminal domain-like | 0 | DIRECT |
49899,63887
49899 - Concanavalin A-like lectins/glucanases
63887 - P-domain of calnexin/calreticulin | 0 | DIRECT |
51735,55347
51735 - NAD(P)-binding Rossmann-fold domains
55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | DIRECT |
54160,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
54585,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
56235,52402
56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
52402 - Adenine nucleotide alpha hydrolases-like | 0 | DIRECT |
88723,47807
88723 - PIN domain-like
47807 - 5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
54534,48452
54534 - FKBP-like
48452 - TPR-like | 0 | DIRECT |
54768,54211
54768 - dsRNA-binding domain-like
54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
53732,52016
53732 - Aconitase iron-sulfur domain
52016 - LeuD/IlvD-like | 0 | DIRECT |
50993,53474
50993 - Peptidase/esterase 'gauge' domain
53474 - alpha/beta-Hydrolases | 0 | DIRECT |
48452,54277
48452 - TPR-like
54277 - CAD & PB1 domains | 0 | DIRECT |
158702,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
57756,57756
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
52374,47323
52374 - Nucleotidylyl transferase
47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | DIRECT |
57863,48403
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | DIRECT |
81901,81901
81901 - HCP-like
81901 - HCP-like | 0 | DIRECT |
50729,57863
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | DIRECT |
47473,52540
47473 - EF-hand
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52467,52518
52467 - DHS-like NAD/FAD-binding domain
52518 - Thiamin diphosphate-binding fold (THDP-binding) | 0 | DIRECT |
55920,46785
55920 - Creatinase/aminopeptidase
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
55874,52172
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | DIRECT |
81811,82754
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
54849,52029
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | DIRECT |
81923,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
81901,48452
81901 - HCP-like
48452 - TPR-like | 0 | DIRECT |
88659,88659
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
103481,103481
103481 - Multidrug resistance efflux transporter EmrE
103481 - Multidrug resistance efflux transporter EmrE | 0 | DIRECT |
48452,46565
48452 - TPR-like
46565 - Chaperone J-domain | 0 | DIRECT |
54928,54928
54928 - RNA-binding domain, RBD
54928 - RNA-binding domain, RBD | 0.1542 | INHERITED FROM: E expanded cotyledon stage || C globular stage |
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
81383,54518
81383 - F-box domain
54518 - Tubby C-terminal domain-like | 0 | Direct |
69065,54768
69065 - RNase III domain-like
54768 - dsRNA-binding domain-like | 0 | Direct |
56176,55447
56176 - FAD-binding/transporter-associated domain-like
55447 - CO dehydrogenase flavoprotein C-terminal domain-like | 0 | Direct |
52402,52833
52402 - Adenine nucleotide alpha hydrolases-like
52833 - Thioredoxin-like | 0 | Direct |
54368,55931
54368 - Glutamine synthetase, N-terminal domain
55931 - Glutamine synthetase/guanido kinase | 0 | Direct |
51338,51556
51338 - Composite domain of metallo-dependent hydrolases
51556 - Metallo-dependent hydrolases | 0 | Direct |
50985,50985
50985 - RCC1/BLIP-II
50985 - RCC1/BLIP-II | 0 | Direct |
81324,81324
81324 - Voltage-gated potassium channels
81324 - Voltage-gated potassium channels | 0 | Direct |
52025,57850
52025 - PA domain
57850 - RING/U-box | 0 | Direct |
47895,52540
47895 - Transducin (alpha subunit), insertion domain
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
52440,56059
52440 - PreATP-grasp domain
56059 - Glutathione synthetase ATP-binding domain-like | 0 | Direct |
47762,47762
47762 - PAH2 domain
47762 - PAH2 domain | 0 | Direct |
54909,54909
54909 - Dimeric alpha+beta barrel
54909 - Dimeric alpha+beta barrel | 0 | Direct |
50978,50978
50978 - WD40 repeat-like
50978 - WD40 repeat-like | 0 | Direct |
50249,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
47364,52540
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
53633,55021
53633 - Carbamate kinase-like
55021 - ACT-like | 0 | Direct |
52518,52518
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52518 - Thiamin diphosphate-binding fold (THDP-binding) | 0 | Direct |
46689,51905
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain | 0 | Direct |
52047,52047
52047 - RNI-like
52047 - RNI-like | 0 | Direct |
52425,48173
52425 - Cryptochrome/photolyase, N-terminal domain
48173 - Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
48592,54849
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like | 0 | Direct |
50729,55961
50729 - PH domain-like
55961 - Bet v1-like | 0 | Direct |
47473,103506
47473 - EF-hand
103506 - Mitochondrial carrier | 0 | Direct |
63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | Direct |
57850,57933
57850 - RING/U-box
57933 - TAZ domain | 0 | Direct |
50156,52096
50156 - PDZ domain-like
52096 - ClpP/crotonase | 0 | Direct |
88798,50249
88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE)
50249 - Nucleic acid-binding proteins | 0 | Direct |
53187,55031
53187 - Zn-dependent exopeptidases
55031 - Bacterial exopeptidase dimerisation domain | 0 | Direct |
81383,50978
81383 - F-box domain
50978 - WD40 repeat-like | 0 | Direct |
55781,55781
55781 - GAF domain-like
55781 - GAF domain-like | 0 | Direct |
46785,158702
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | Direct |
55785,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like | 0 | Direct |
47005,52777
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | Direct |
55545,51445
55545 - beta-N-acetylhexosaminidase-like domain
51445 - (Trans)glycosidases | 0 | Direct |
52087,101576
52087 - CRAL/TRIO domain
101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
55781,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
52743,52025
52743 - Subtilisin-like
52025 - PA domain | 0 | Direct |
57850,52540
57850 - RING/U-box
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52540,48340
52540 - P-loop containing nucleoside triphosphate hydrolases
48340 - Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
101690,69065
101690 - PAZ domain
69065 - RNase III domain-like | 0 | Direct |
52540,47446
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | Direct |
161219,161245
161219 - CHY zinc finger-like
161245 - Zinc hairpin stack | 0 | Direct |
53300,81995
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | Direct |
57850,54928
57850 - RING/U-box
54928 - RNA-binding domain, RBD | 0 | Direct |
102848,54236
102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
54236 - Ubiquitin-like | 0 | Direct |
75471,75471
75471 - YhbY-like
75471 - YhbY-like | 0 | Direct |
49785,49785
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like | 0 | Direct |
52540,52317
52540 - P-loop containing nucleoside triphosphate hydrolases
52317 - Class I glutamine amidotransferase-like | 0 | Direct |
56112,57850
56112 - Protein kinase-like (PK-like)
57850 - RING/U-box | 0 | Direct |
56112,48371
56112 - Protein kinase-like (PK-like)
48371 - ARM repeat | 0 | Direct |
109604,81301
109604 - HD-domain/PDEase-like
81301 - Nucleotidyltransferase | 0 | Direct |
55785,55785
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
52518,52467
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52467 - DHS-like NAD/FAD-binding domain | 0 | Direct |
52172,52172
52172 - CheY-like
52172 - CheY-like | 0 | Direct |
50729,81837
50729 - PH domain-like
81837 - BEACH domain | 0 | Direct |
81296,52540
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
53738,55957
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
51735,143548
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | Direct |
48403,57850
48403 - Ankyrin repeat
57850 - RING/U-box | 0 | Direct |
81698,81698
81698 - FF domain
81698 - FF domain | 0 | Direct |
47384,55874
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | Direct |
101238,46934
101238 - XPC-binding domain
46934 - UBA-like | 0 | Direct |
57716,57716
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | Direct |
53850,55021
53850 - Periplasmic binding protein-like II
55021 - ACT-like | 0 | Direct |
48179,52413
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
58014,51064
58014 - Coiled-coil domain of nucleotide exchange factor GrpE
51064 - Head domain of nucleotide exchange factor GrpE | 0 | Direct |
57850,46689
57850 - RING/U-box
46689 - Homeodomain-like | 0 | Direct |
143548,55021
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | Direct |
56524,81296
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0 | Direct |
52317,52317
52317 - Class I glutamine amidotransferase-like
52317 - Class I glutamine amidotransferase-like | 0 | Direct |
54211,55666
54211 - Ribosomal protein S5 domain 2-like
55666 - Ribonuclease PH domain 2-like | 0 | Direct |
81995,81811
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | Direct |
81301,81891
81301 - Nucleotidyltransferase
81891 - Poly A polymerase C-terminal region-like | 0 | Direct |
54826,51604
54826 - Enolase N-terminal domain-like
51604 - Enolase C-terminal domain-like | 0 | Direct |
56059,52210
56059 - Glutathione synthetase ATP-binding domain-like
52210 - Succinyl-CoA synthetase domains | 0 | Direct |
57938,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | Direct |
54171,54171
54171 - DNA-binding domain
54171 - DNA-binding domain | 0 | Direct |
51445,49785
51445 - (Trans)glycosidases
49785 - Galactose-binding domain-like | 0 | Direct |
54768,54768
54768 - dsRNA-binding domain-like
54768 - dsRNA-binding domain-like | 0 | Direct |
50447,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | Direct |
51230,47005
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
48403,52540
48403 - Ankyrin repeat
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
82199,81822
82199 - SET domain
81822 - RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | Direct |
54695,48452
54695 - POZ domain
48452 - TPR-like | 0 | Direct |
50249,55681
50249 - Nucleic acid-binding proteins
55681 - Class II aaRS and biotin synthetases | 0 | Direct |
46785,144074
46785 - "Winged helix" DNA-binding domain
144074 - E2F-DP heterodimerization region | 0 | Direct |
47661,58038
47661 - t-snare proteins
58038 - SNARE fusion complex | 0 | Direct |
52540,54211
52540 - P-loop containing nucleoside triphosphate hydrolases
54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
54534,54534
54534 - FKBP-like
54534 - FKBP-like | 0 | Direct |
110324,50249
110324 - Ribosomal L27 protein-like
50249 - Nucleic acid-binding proteins | 0 | Direct |
81296,51445
81296 - E set domains
51445 - (Trans)glycosidases | 0 | Direct |
74650,51445
74650 - Galactose mutarotase-like
51445 - (Trans)glycosidases | 0 | Direct |
56091,50249
56091 - DNA ligase/mRNA capping enzyme, catalytic domain
50249 - Nucleic acid-binding proteins | 0 | Direct |
161245,57850
161245 - Zinc hairpin stack
57850 - RING/U-box | 0 | Direct |
46785,54928
46785 - "Winged helix" DNA-binding domain
54928 - RNA-binding domain, RBD | 0 | Direct |
51695,51695
51695 - PLC-like phosphodiesterases
51695 - PLC-like phosphodiesterases | 0 | Direct |
46565,57938
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain | 0 | Direct |
53383,53383
53383 - PLP-dependent transferases
53383 - PLP-dependent transferases | 0 | Direct |
141673,50800
141673 - MOSC N-terminal domain-like
50800 - PK beta-barrel domain-like | 0 | Direct |
55821,142695
55821 - YrdC/RibB
142695 - RibA-like | 0 | Direct |
53300,57850
53300 - vWA-like
57850 - RING/U-box | 0 | Direct |
101908,56219
101908 - Putative isomerase YbhE
56219 - DNase I-like | 0 | Direct |
82919,53300
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | Direct |
54637,54637
54637 - Thioesterase/thiol ester dehydrase-isomerase
54637 - Thioesterase/thiol ester dehydrase-isomerase | 0 | Direct |
57903,57903
57903 - FYVE/PHD zinc finger
57903 - FYVE/PHD zinc finger | 0 | Direct |
55021,56112
55021 - ACT-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
53756,56784
53756 - UDP-Glycosyltransferase/glycogen phosphorylase
56784 - HAD-like | 0 | Direct |
47741,56176
47741 - CO dehydrogenase ISP C-domain like
56176 - FAD-binding/transporter-associated domain-like | 0 | Direct |
56059,51246
56059 - Glutathione synthetase ATP-binding domain-like
51246 - Rudiment single hybrid motif | 0 | Direct |
50692,54585
50692 - ADC-like
54585 - Cdc48 domain 2-like | 0 | Direct |
46689,46785
46689 - Homeodomain-like
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
88697,52374
88697 - PUA domain-like
52374 - Nucleotidylyl transferase | 0 | Direct |
48371,50978
48371 - ARM repeat
50978 - WD40 repeat-like | 0 | Direct |
50022,55961
50022 - ISP domain
55961 - Bet v1-like | 0 | Direct |
55447,54665
55447 - CO dehydrogenase flavoprotein C-terminal domain-like
54665 - CO dehydrogenase molybdoprotein N-domain-like | 0 | Direct |
158702,81296
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | Direct |
52283,51735
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains | 0 | Direct |
81383,52058
81383 - F-box domain
52058 - L domain-like | 0 | Direct |
52540,48403
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | Direct |
63737,55486
63737 - Leukotriene A4 hydrolase N-terminal domain
55486 - Metalloproteases ("zincins"), catalytic domain | 0 | Direct |
48452,81901
48452 - TPR-like
81901 - HCP-like | 0 | Direct |
56672,100879
56672 - DNA/RNA polymerases
100879 - Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
52540,90002
52540 - P-loop containing nucleoside triphosphate hydrolases
90002 - Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
55781,47384
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase | 0 | Direct |
54292,47741
54292 - 2Fe-2S ferredoxin-like
47741 - CO dehydrogenase ISP C-domain like | 0 | Direct |
56219,56219
56219 - DNase I-like
56219 - DNase I-like | 0 | Direct |
57850,49599
57850 - RING/U-box
49599 - TRAF domain-like | 0 | Direct |
52540,48019
52540 - P-loop containing nucleoside triphosphate hydrolases
48019 - post-AAA+ oligomerization domain-like | 0 | Direct |
117916,117916
117916 - Fe-S cluster assembly (FSCA) domain-like
117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | Direct |
51735,48179
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | Direct |
64356,49447
64356 - SNARE-like
49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
54791,54791
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
103657,50729
103657 - BAR/IMD domain-like
50729 - PH domain-like | 0 | Direct |
47592,159042
47592 - SWIB/MDM2 domain
159042 - Plus3-like | 0 | Direct |
81995,82919
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24 | 0 | Direct |
57903,55729
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | Direct |
158639,63748
158639 - ENT-like
63748 - Tudor/PWWP/MBT | 0 | Direct |
100950,75445
100950 - NagB/RpiA/CoA transferase-like
75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
54665,56003
54665 - CO dehydrogenase molybdoprotein N-domain-like
56003 - Molybdenum cofactor-binding domain | 0 | Direct |
90209,90209
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like | 0 | Direct |
51045,51045
51045 - WW domain
51045 - WW domain | 0 | Direct |
54897,52743
54897 - Protease propeptides/inhibitors
52743 - Subtilisin-like | 0 | Direct |
54747,46906
54747 - Ribosomal L11/L12e N-terminal domain
46906 - Ribosomal protein L11, C-terminal domain | 0 | Direct |
54980,54980
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | Direct |
82185,82185
82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | Direct |
117018,56091
117018 - ATP-dependent DNA ligase DNA-binding domain
56091 - DNA ligase/mRNA capping enzyme, catalytic domain | 0 | Direct |
56235,53271
56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
53271 - PRTase-like | 0 | Direct |
52540,52058
52540 - P-loop containing nucleoside triphosphate hydrolases
52058 - L domain-like | 0 | Direct |
53223,51735
53223 - Aminoacid dehydrogenase-like, N-terminal domain
51735 - NAD(P)-binding Rossmann-fold domains | 0 | Direct |
54160,54160
54160 - Chromo domain-like
54160 - Chromo domain-like | 0 | Direct |
88946,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
82171,53474
82171 - DPP6 N-terminal domain-like
53474 - alpha/beta-Hydrolases | 0 | Direct |
101936,101936
101936 - DNA-binding pseudobarrel domain
101936 - DNA-binding pseudobarrel domain | 0 | Direct |
54928,57756
54928 - RNA-binding domain, RBD
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
52518,52922
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52922 - TK C-terminal domain-like | 0 | Direct |
49899,63887
49899 - Concanavalin A-like lectins/glucanases
63887 - P-domain of calnexin/calreticulin | 0 | Direct |
51735,55347
51735 - NAD(P)-binding Rossmann-fold domains
55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | Direct |
54160,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
54585,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
56235,52402
56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
52402 - Adenine nucleotide alpha hydrolases-like | 0 | Direct |
88723,47807
88723 - PIN domain-like
47807 - 5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
54534,48452
54534 - FKBP-like
48452 - TPR-like | 0 | Direct |
54768,54211
54768 - dsRNA-binding domain-like
54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
53732,52016
53732 - Aconitase iron-sulfur domain
52016 - LeuD/IlvD-like | 0 | Direct |
50993,53474
50993 - Peptidase/esterase 'gauge' domain
53474 - alpha/beta-Hydrolases | 0 | Direct |
48452,54277
48452 - TPR-like
54277 - CAD & PB1 domains | 0 | Direct |
158702,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
57756,57756
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
52374,47323
52374 - Nucleotidylyl transferase
47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | Direct |
57863,48403
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | Direct |
81901,81901
81901 - HCP-like
81901 - HCP-like | 0 | Direct |
50729,57863
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | Direct |
47473,52540
47473 - EF-hand
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52467,52518
52467 - DHS-like NAD/FAD-binding domain
52518 - Thiamin diphosphate-binding fold (THDP-binding) | 0 | Direct |
55920,46785
55920 - Creatinase/aminopeptidase
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
55874,52172
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | Direct |
81811,82754
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
54849,52029
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | Direct |
81923,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
81901,48452
81901 - HCP-like
48452 - TPR-like | 0 | Direct |
88659,88659
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
103481,103481
103481 - Multidrug resistance efflux transporter EmrE
103481 - Multidrug resistance efflux transporter EmrE | 0 | Direct |
48452,46565
48452 - TPR-like
46565 - Chaperone J-domain | 0 | Direct |
54928,54928
54928 - RNA-binding domain, RBD
54928 - RNA-binding domain, RBD | 0.1542 | Inherited |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Triple) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52440,56059,51246
52440 - PreATP-grasp domain
56059 - Glutathione synthetase ATP-binding domain-like
51246 - Rudiment single hybrid motif | 0 | DIRECT |
54928,54928,54928
54928 - RNA-binding domain, RBD
54928 - RNA-binding domain, RBD
54928 - RNA-binding domain, RBD | 0 | DIRECT |
81296,51445,51011
81296 - E set domains
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | DIRECT |
74650,51445,51011
74650 - Galactose mutarotase-like
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | DIRECT |
57850,57850,57933
57850 - RING/U-box
57850 - RING/U-box
57933 - TAZ domain | 0 | DIRECT |
52540,52540,46785
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
55785,55781,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
55781 - GAF domain-like | 0 | DIRECT |
52518,52467,52518
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52467 - DHS-like NAD/FAD-binding domain
52518 - Thiamin diphosphate-binding fold (THDP-binding) | 0 | DIRECT |
54292,47741,56176
54292 - 2Fe-2S ferredoxin-like
47741 - CO dehydrogenase ISP C-domain like
56176 - FAD-binding/transporter-associated domain-like | 0 | DIRECT |
47741,56176,55447
47741 - CO dehydrogenase ISP C-domain like
56176 - FAD-binding/transporter-associated domain-like
55447 - CO dehydrogenase flavoprotein C-terminal domain-like | 0 | DIRECT |
81383,52047,52047
81383 - F-box domain
52047 - RNI-like
52047 - RNI-like | 0 | DIRECT |
46938,52087,101576
46938 - CRAL/TRIO N-terminal domain
52087 - CRAL/TRIO domain
101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
53738,53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
54534,54534,54534
54534 - FKBP-like
54534 - FKBP-like
54534 - FKBP-like | 0 | DIRECT |
50447,54980,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
52047,52047,56112
52047 - RNI-like
52047 - RNI-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
52518,52518,52922
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52922 - TK C-terminal domain-like | 0 | DIRECT |
57903,57903,55729
57903 - FYVE/PHD zinc finger
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | DIRECT |
81995,81811,82754
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
48592,54849,52029
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | DIRECT |
46689,51905,54373
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain
54373 - FAD-linked reductases, C-terminal domain | 0 | DIRECT |
158702,52540,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
161219,161245,57850
161219 - CHY zinc finger-like
161245 - Zinc hairpin stack
57850 - RING/U-box | 0 | DIRECT |
50249,57756,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
88946,88659,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
52833,52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | DIRECT |
52540,50447,54980
52540 - P-loop containing nucleoside triphosphate hydrolases
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
51445,49785,49785
51445 - (Trans)glycosidases
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like | 0 | DIRECT |
46565,57938,49493
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
54534,54534,48452
54534 - FKBP-like
54534 - FKBP-like
48452 - TPR-like | 0 | DIRECT |
50729,57863,48403
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | DIRECT |
47364,52540,47446
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | DIRECT |
51230,47005,52777
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | DIRECT |
81995,82919,53300
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | DIRECT |
46785,158702,52540
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
57938,49493,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
82919,53300,81995
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
103657,50729,57863
103657 - BAR/IMD domain-like
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | DIRECT |
55781,55785,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
117018,56091,50249
117018 - ATP-dependent DNA ligase DNA-binding domain
56091 - DNA ligase/mRNA capping enzyme, catalytic domain
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
53633,55021,55021
53633 - Carbamate kinase-like
55021 - ACT-like
55021 - ACT-like | 0 | DIRECT |
54160,52540,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
46785,158702,81296
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | DIRECT |
81698,81698,81698
81698 - FF domain
81698 - FF domain
81698 - FF domain | 0 | DIRECT |
57716,57716,57716
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | DIRECT |
55447,54665,56003
55447 - CO dehydrogenase flavoprotein C-terminal domain-like
54665 - CO dehydrogenase molybdoprotein N-domain-like
56003 - Molybdenum cofactor-binding domain | 0 | DIRECT |
55781,47384,55874
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | DIRECT |
55781,55781,55785
55781 - GAF domain-like
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
53738,53738,55957
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
51735,48179,52413
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
55973,55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
50692,54585,52540
50692 - ADC-like
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52047,52058,56112
52047 - RNI-like
52058 - L domain-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
81923,52540,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
51735,143548,55021
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | DIRECT |
54695,48452,48452
54695 - POZ domain
48452 - TPR-like
48452 - TPR-like | 0 | DIRECT |
49785,49785,51445
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like
51445 - (Trans)glycosidases | 0 | DIRECT |
101936,101936,101936
101936 - DNA-binding pseudobarrel domain
101936 - DNA-binding pseudobarrel domain
101936 - DNA-binding pseudobarrel domain | 0 | DIRECT |
54160,54160,52540
54160 - Chromo domain-like
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
48452,48452,48452
48452 - TPR-like
48452 - TPR-like
48452 - TPR-like | 0 | DIRECT |
52283,51735,143548
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | DIRECT |
53300,81995,81811
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | DIRECT |
90209,90209,90209
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like | 0 | DIRECT |
52540,46785,158702
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
47384,55874,52172
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | DIRECT |
54585,52540,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52058,52058,56112
52058 - L domain-like
52058 - L domain-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
90229,90229,90229
90229 - CCCH zinc finger
90229 - CCCH zinc finger
90229 - CCCH zinc finger | 0 | DIRECT |
56176,55447,54665
56176 - FAD-binding/transporter-associated domain-like
55447 - CO dehydrogenase flavoprotein C-terminal domain-like
54665 - CO dehydrogenase molybdoprotein N-domain-like | 0 | DIRECT |
63411,63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | DIRECT |
81296,52540,48403
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | DIRECT |
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
52440,56059,51246
52440 - PreATP-grasp domain
56059 - Glutathione synthetase ATP-binding domain-like
51246 - Rudiment single hybrid motif | 0 | Direct |
54928,54928,54928
54928 - RNA-binding domain, RBD
54928 - RNA-binding domain, RBD
54928 - RNA-binding domain, RBD | 0 | Direct |
81296,51445,51011
81296 - E set domains
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | Direct |
74650,51445,51011
74650 - Galactose mutarotase-like
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | Direct |
57850,57850,57933
57850 - RING/U-box
57850 - RING/U-box
57933 - TAZ domain | 0 | Direct |
52540,52540,46785
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
55785,55781,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
55781 - GAF domain-like | 0 | Direct |
52518,52467,52518
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52467 - DHS-like NAD/FAD-binding domain
52518 - Thiamin diphosphate-binding fold (THDP-binding) | 0 | Direct |
54292,47741,56176
54292 - 2Fe-2S ferredoxin-like
47741 - CO dehydrogenase ISP C-domain like
56176 - FAD-binding/transporter-associated domain-like | 0 | Direct |
47741,56176,55447
47741 - CO dehydrogenase ISP C-domain like
56176 - FAD-binding/transporter-associated domain-like
55447 - CO dehydrogenase flavoprotein C-terminal domain-like | 0 | Direct |
81383,52047,52047
81383 - F-box domain
52047 - RNI-like
52047 - RNI-like | 0 | Direct |
46938,52087,101576
46938 - CRAL/TRIO N-terminal domain
52087 - CRAL/TRIO domain
101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
53738,53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
54534,54534,54534
54534 - FKBP-like
54534 - FKBP-like
54534 - FKBP-like | 0 | Direct |
50447,54980,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | Direct |
52047,52047,56112
52047 - RNI-like
52047 - RNI-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
52518,52518,52922
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52518 - Thiamin diphosphate-binding fold (THDP-binding)
52922 - TK C-terminal domain-like | 0 | Direct |
57903,57903,55729
57903 - FYVE/PHD zinc finger
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | Direct |
81995,81811,82754
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
48592,54849,52029
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | Direct |
46689,51905,54373
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain
54373 - FAD-linked reductases, C-terminal domain | 0 | Direct |
158702,52540,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
161219,161245,57850
161219 - CHY zinc finger-like
161245 - Zinc hairpin stack
57850 - RING/U-box | 0 | Direct |
50249,57756,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
88946,88659,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
52833,52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | Direct |
52540,50447,54980
52540 - P-loop containing nucleoside triphosphate hydrolases
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | Direct |
51445,49785,49785
51445 - (Trans)glycosidases
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like | 0 | Direct |
46565,57938,49493
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | Direct |
54534,54534,48452
54534 - FKBP-like
54534 - FKBP-like
48452 - TPR-like | 0 | Direct |
50729,57863,48403
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | Direct |
47364,52540,47446
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | Direct |
51230,47005,52777
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | Direct |
81995,82919,53300
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | Direct |
46785,158702,52540
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
57938,49493,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | Direct |
82919,53300,81995
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
103657,50729,57863
103657 - BAR/IMD domain-like
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | Direct |
55781,55785,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
117018,56091,50249
117018 - ATP-dependent DNA ligase DNA-binding domain
56091 - DNA ligase/mRNA capping enzyme, catalytic domain
50249 - Nucleic acid-binding proteins | 0 | Direct |
53633,55021,55021
53633 - Carbamate kinase-like
55021 - ACT-like
55021 - ACT-like | 0 | Direct |
54160,52540,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
46785,158702,81296
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | Direct |
81698,81698,81698
81698 - FF domain
81698 - FF domain
81698 - FF domain | 0 | Direct |
57716,57716,57716
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain)
57716 - Glucocorticoid receptor-like (DNA-binding domain) | 0 | Direct |
55447,54665,56003
55447 - CO dehydrogenase flavoprotein C-terminal domain-like
54665 - CO dehydrogenase molybdoprotein N-domain-like
56003 - Molybdenum cofactor-binding domain | 0 | Direct |
55781,47384,55874
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | Direct |
55781,55781,55785
55781 - GAF domain-like
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
53738,53738,55957
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
51735,48179,52413
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
55973,55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | Direct |
50692,54585,52540
50692 - ADC-like
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52047,52058,56112
52047 - RNI-like
52058 - L domain-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
81923,52540,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
51735,143548,55021
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | Direct |
54695,48452,48452
54695 - POZ domain
48452 - TPR-like
48452 - TPR-like | 0 | Direct |
49785,49785,51445
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like
51445 - (Trans)glycosidases | 0 | Direct |
101936,101936,101936
101936 - DNA-binding pseudobarrel domain
101936 - DNA-binding pseudobarrel domain
101936 - DNA-binding pseudobarrel domain | 0 | Direct |
54160,54160,52540
54160 - Chromo domain-like
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
48452,48452,48452
48452 - TPR-like
48452 - TPR-like
48452 - TPR-like | 0 | Direct |
52283,51735,143548
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | Direct |
53300,81995,81811
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | Direct |
90209,90209,90209
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like | 0 | Direct |
52540,46785,158702
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | Direct |
47384,55874,52172
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | Direct |
54585,52540,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52058,52058,56112
52058 - L domain-like
52058 - L domain-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
90229,90229,90229
90229 - CCCH zinc finger
90229 - CCCH zinc finger
90229 - CCCH zinc finger | 0 | Direct |
56176,55447,54665
56176 - FAD-binding/transporter-associated domain-like
55447 - CO dehydrogenase flavoprotein C-terminal domain-like
54665 - CO dehydrogenase molybdoprotein N-domain-like | 0 | Direct |
63411,63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | Direct |
81296,52540,48403
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | Direct |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Plot distribution on species Tree Of Life (sTOL) for Superfamily and/or Family domains annotated by this AP term
 |
Plot tree as:
| |
Download Newick format tree:
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( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domain
architecture data for all genomes in SUPERFAMILY. The PAUP
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
Plot distribution on species Tree Of Life (sTOL) for single supra-domains annotated by this AP term
|
Plot tree as:
| |
Download Newick format tree:
| |
Browsing in TREE OF LIFE:
|
( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
|
|
> BO Hierarchy > plant embryo stage
