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Plant ANatomical entity (PAN): portion of plant tissue 
(show info)
Biomedical Ontology
Like Gene Ontology (GO), biomedical ontology such as phenotype ontology classifies and organizes gene-mutant/null phenotypic information from the very general at the top to more specific terms in the directed acyclic graph (DAG) by viewing an individual term as a node and its relations to parental terms (allowing for multiple parents) as directed edges. To navigate this hierarchy, we display all parental phenotypic terms to the current phenotypic term of interest ordered by their shortest distances to the current term. Also, only direct children phenotypic terms of the current phenotypic term are listed. Biomedical ontologies we have incorporated are as follows:
- Disease Ontology (DO) Ontology DO semantically integrates disease and medical vocabularies through extensive cross mapping of DO terms to MeSH, ICD, NCI’s thesaurus, SNOMED and OMIM.
- Human Phenotype (HP) Ontology HP captures phenotypic abnormalities that are described in OMIM, along with the corresponding disease-causing genes. It includes three complementary biological concepts: Mode_of_Inheritance (MI), ONset_and_clinical_course (ON), and Phenotypic_Abnormality (PA).
- Mouse Phenotype (MP) Ontology MP describes phenotypes of the mouse after a specific gene is genetically disrupted. Using it, Mouse Genome Informatics (MGI) provides high-coverate gene-level phenotypes for the mouse.
- Worm Phenotype (WP) Ontology WP classifies and organizes phenotype descriptions for C. elegans and other nematodes. Using it, WormBase provides primary resource for phenotype annotations for C. elegans.
- Yeast Phenotype (YP) Ontology Based on YP which is the major contributor to the ‘Ascomycete phenotype ontology’, Saccharomyces Genome Database (SGD) provides single mutant phenotypes for every gene in the yeast genome.
- Fly Phenotype (FP) Ontology FP refers to FlyBase controlled vocabulary. Specifically, a structured controlled vocabulary is used for the annotation of alleles (for their mutagen etc) in FlyBase.
- Fly Anatomy (FA) Ontology FA is a structured controlled vocabulary of the anatomy of Drosophila melanogaster, used for the description of phenotypes and where a gene is expressed.
- Zebrafish Anatomy (ZA) Ontology ZA displays anatomical terms of the zebrafish using standard anatomical nomenclature, together with affected genes.
- Xenopus Anatomy (XA) Ontology XA represents the lineage of tissues and the timing of development for frogs (Xenopus laevis and Xenopus tropicalis). It is used to annotate Xenopus gene expression patterns and mutant and morphant phenotypes.
- Arabidopsis Plant Ontology (AP) Ontology As a major contributor to Plant Ontology which describes plant anatomical and morphological structures (AN) and growth and developmental stages (DE), the Arabidopsis Information Resource (TAIR) provides arabidopsis plant ontology annotations for the model higher plant Arabidopsis thaliana.
- Enzyme Commission (EC) Ontology Each enzyme is allocated a four-digit EC number, the first three digits of which define the reaction catalysed and the fourth of which is a unique identifier (serial number). Each enzyme is also assigned a systematic name that uniquely defines the reaction catalysed.
- UniProtKB KeyWords (KW) Ontology Keywords in UniProtKB are controlled vocabulary, providing a summary of the entry content and are used to index UniProtKB/Swiss-Prot entries based on 10 categories (the category "Technical term" being excluded here). Each keyword is attributed manually to UniProtKB/Swiss-Prot entries and automatically to UniProtKB/TrEMBL entries (according to specific annotation rules).
- CTD Diseases (CD) Ontology CD is MEDIC disease vocabulary that is modified by CTD from the "Diseases" [C] branch of Medical Subject Headings (MeSH), combined with genetic disorders from the Online Mendelian Inheritance in OMIM database.
- CTD Chemicals (CC) Ontology CC is chemical vocabulary that is adapted by CTD from the "Chemicals and Drugs" category and Supplementary Concept Records of Medical Subject Headings (MeSH, a hierarchical vocabulary used to index articles for MEDLINE/PubMed).
Jump to [ Top · Hierarchy · Annotations ]
Root: AP Hierarchy (arabidopsis plant ontology with 2 sub-ontologies AN, DE)
Jump to [ Top · Hierarchy ]
Superfamily( show details)
Highlighted in gray are those with FDR_all>0.001
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| Signal peptide-binding domain | 0 | DIRECT |
| E2F-DP heterodimerization region | 0 | DIRECT |
| Cysteine alpha-hairpin motif | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| Caspase-like | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| L-aspartase-like | 0 | DIRECT |
| DNA repair protein MutS, domain I | 0 | DIRECT |
| VHP, Villin headpiece domain | 0 | DIRECT |
| SCOP hierarchy in SUPERFAMILY | 0 | DIRECT |
| ThrRS/AlaRS common domain | 0 | DIRECT |
| Lipocalins | 0 | DIRECT |
| LysM domain | 0 | DIRECT |
| RBP11-like subunits of RNA polymerase | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| TATA-box binding protein-like | 0 | DIRECT |
| Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
| RuBisCO, small subunit | 0 | DIRECT |
| Phosphofructokinase | 0 | DIRECT |
| S-adenosylmethionine decarboxylase | 0 | DIRECT |
| BSD domain-like | 0 | DIRECT |
| Rudiment single hybrid motif | 0 | DIRECT |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| Cytochrome c oxidase subunit h | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| PUG domain-like | 0 | DIRECT |
| ADP-ribosylation | 0 | DIRECT |
| beta and beta-prime subunits of DNA dependent RNA-polymerase | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| LexA/Signal peptidase | 0 | DIRECT |
| Transcription factor IIA (TFIIA), alpha-helical domain | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| TGS-like | 0 | DIRECT |
| tRNA-binding arm | 0 | DIRECT |
| EGF/Laminin | 0 | DIRECT |
| Cryptochrome/photolyase, N-terminal domain | 0 | DIRECT |
| LeuD/IlvD-like | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| Oxygen-evolving enhancer protein 3, | 0 | DIRECT |
| Tubulin C-terminal domain-like | 0 | DIRECT |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | DIRECT |
| lambda repressor-like DNA-binding domains | 0 | DIRECT |
| DNA breaking-rejoining enzymes | 0 | DIRECT |
| Insert subdomain of RNA polymerase alpha subunit | 0 | DIRECT |
| MoaD/ThiS | 0 | DIRECT |
| UROD/MetE-like | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| Creatinase/aminopeptidase | 0 | DIRECT |
| Thymidylate synthase/dCMP hydroxymethylase | 0 | DIRECT |
| Nucleotidylyl transferase | 0 | DIRECT |
| Crambin-like | 0 | DIRECT |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
| Homocysteine S-methyltransferase | 0 | DIRECT |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| Carbamate kinase-like | 0 | DIRECT |
| VC0467-like | 0 | DIRECT |
| Staphylococcal nuclease | 0 | DIRECT |
| Putative isomerase YbhE | 0 | DIRECT |
| YrdC/RibB | 0 | DIRECT |
| ACT-like | 0 | DIRECT |
| Class II aaRS ABD-related | 0 | DIRECT |
| Release factor | 0 | DIRECT |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| Tautomerase/MIF | 0 | DIRECT |
| PreATP-grasp domain | 0 | DIRECT |
| L9 N-domain-like | 0 | DIRECT |
| Ribosomal protein L1 | 0 | DIRECT |
| Glutathione synthetase ATP-binding domain-like | 0 | DIRECT |
| Ribosomal protein S3 C-terminal domain | 0 | DIRECT |
| RecA protein, C-terminal domain | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| eIF4e-like | 0 | DIRECT |
| Ribosomal protein L6 | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Electron transport accessory proteins | 0 | DIRECT |
| Endosomal sorting complex assembly domain | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| Single hybrid motif | 0 | DIRECT |
| Ribosomal protein L22 | 0 | DIRECT |
| Chelatase | 0 | DIRECT |
| FKBP-like | 0 | DIRECT |
| Metallo-hydrolase/oxidoreductase | 0 | DIRECT |
| Sec1/munc18-like (SM) proteins | 0 | DIRECT |
| PLP-binding barrel | 0 | DIRECT |
| YVTN repeat-like/Quinoprotein amine dehydrogenase | 0 | DIRECT |
| Translation initiation factor IF3, C-terminal domain | 0 | DIRECT |
| Mitochondrial glycoprotein MAM33-like | 0 | DIRECT |
| Tropomyosin | 0 | DIRECT |
| Clc chloride channel | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| Protein prenylyltransferase | 0 | DIRECT |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
| Subdomain of clathrin and coatomer appendage domain | 0 | DIRECT |
| Tubulin nucleotide-binding domain-like | 0 | DIRECT |
| Gamma-glutamyl cyclotransferase-like | 0 | DIRECT |
| NAP-like | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| Chlorophyll a-b binding protein | 0 | DIRECT |
| Transcription factor IIA (TFIIA), beta-barrel domain | 0 | DIRECT |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
| FMN-linked oxidoreductases | 0 | DIRECT |
| Pentapeptide repeat-like | 0 | DIRECT |
| Retrovirus zinc finger-like domains | 0 | DIRECT |
| Chalcone isomerase | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | 0 | DIRECT |
| beta-sandwich domain of Sec23/24 | 0 | DIRECT |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
| DNA topoisomerase IV, alpha subunit | 0 | DIRECT |
| Nucleoside diphosphate kinase, NDK | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
| EF-G C-terminal domain-like | 0 | DIRECT |
| RL5-like | 0 | DIRECT |
| Saposin | 0 | DIRECT |
| Folate-binding domain | 0 | DIRECT |
| ALDH-like | 0 | DIRECT |
| Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
| F1F0 ATP synthase subunit C | 0 | DIRECT |
| Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
| FMN-binding split barrel | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Ribonuclease PH domain 2-like | 0 | DIRECT |
| Enolase C-terminal domain-like | 0 | DIRECT |
| Heat shock protein 70kD (HSP70), peptide-binding domain | 0 | DIRECT |
| Hypothetical protein TM0160 | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| Metallo-dependent hydrolases | 0 | DIRECT |
| Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0 | DIRECT |
| HSP90 C-terminal domain | 0 | DIRECT |
| LuxS/MPP-like metallohydrolase | 0 | DIRECT |
| BAG domain | 0 | DIRECT |
| Bacterial exopeptidase dimerisation domain | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| LEA14-like | 0 | DIRECT |
| Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| beta-N-acetylhexosaminidase-like domain | 0 | DIRECT |
| EB1 dimerisation domain-like | 0 | DIRECT |
| Macro domain-like | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| LDH C-terminal domain-like | 0 | DIRECT |
| Radical SAM enzymes | 0 | DIRECT |
| N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 | 0 | DIRECT |
| Chorismate mutase II | 0 | DIRECT |
| Activating enzymes of the ubiquitin-like proteins | 0 | DIRECT |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| RNase III domain-like | 0 | DIRECT |
| ISP domain | 0 | DIRECT |
| GlnB-like | 0 | DIRECT |
| Peptidyl-tRNA hydrolase II | 0 | DIRECT |
| LigT-like | 0 | DIRECT |
| Arp2/3 complex subunits | 0 | DIRECT |
| alpha/beta knot | 0 | DIRECT |
| Chromo domain-like | 0 | DIRECT |
| Serine metabolism enzymes domain | 0 | DIRECT |
| L28p-like | 0 | DIRECT |
| Mss4-like | 0 | DIRECT |
| FAH | 0 | DIRECT |
| Band 7/SPFH domain | 0 | DIRECT |
| SH2 domain | 0 | DIRECT |
| Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
| Ferritin-like | 0 | DIRECT |
| Prokaryotic type KH domain (KH-domain type II) | 0 | DIRECT |
| Heme oxygenase-like | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| Diaminopimelate epimerase-like | 0 | DIRECT |
| WW domain | 0 | DIRECT |
| Elongation factor TFIIS domain 2 | 0 | DIRECT |
| S13-like H2TH domain | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| ITPase-like | 0 | DIRECT |
| beta-carbonic anhydrase, cab | 0 | DIRECT |
| Rubredoxin-like | 0 | DIRECT |
| DNA repair protein MutS, domain II | 0 | DIRECT |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | DIRECT |
| Ribosomal protein L16p/L10e | 0 | DIRECT |
| ssDNA-binding transcriptional regulator domain | 0 | DIRECT |
| Carbon-nitrogen hydrolase | 0 | DIRECT |
| GroEL-intermediate domain like | 0 | DIRECT |
| LanC-like | 0 | DIRECT |
| AlbA-like | 0 | DIRECT |
| Alpha-L RNA-binding motif | 0 | DIRECT |
| Clathrin adaptor appendage domain | 0 | DIRECT |
| Actin-crosslinking proteins | 0 | DIRECT |
| Heat shock protein 70kD (HSP70), C-terminal subdomain | 0 | DIRECT |
| GroEL apical domain-like | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| Trm112p-like | 0 | DIRECT |
| HIT/MYND zinc finger-like | 0 | DIRECT |
| S15/NS1 RNA-binding domain | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | DIRECT |
| FAD-linked oxidoreductase | 0 | DIRECT |
| Flavoproteins | 0 | DIRECT |
| Pseudouridine synthase | 0 | DIRECT |
| MOSC N-terminal domain-like | 0 | DIRECT |
| PriA/YqbF domain | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | DIRECT |
| Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
| OMPA-like | 0 | DIRECT |
| Allene oxide cyclase-like | 0 | DIRECT |
| Cytochrome c | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
| Probable bacterial effector-binding domain | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| GINS helical bundle-like | 0 | DIRECT |
| Class II aaRS and biotin synthetases | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| Enolase N-terminal domain-like | 0 | DIRECT |
| Mitochondrial carrier | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| Mediator hinge subcomplex-like | 0 | DIRECT |
| Initiation factor IF2/eIF5b, domain 3 | 0 | DIRECT |
| FtsH protease domain-like | 0 | DIRECT |
| Seven-hairpin glycosidases | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| RplX-like | 0 | DIRECT |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
| Thioesterase/thiol ester dehydrase-isomerase | 0 | DIRECT |
| CYTH-like phosphatases | 0 | DIRECT |
| Inorganic pyrophosphatase | 0 | DIRECT |
| SAM/Pointed domain | 0 | DIRECT |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | DIRECT |
| Ammonium transporter | 0 | DIRECT |
| Ribosomal protein S10 | 0 | DIRECT |
| Carbohydrate phosphatase | 0 | DIRECT |
| AF1104-like | 0 | DIRECT |
| Formyltransferase | 0 | DIRECT |
| alpha-helical ferredoxin | 0 | DIRECT |
| post-AAA+ oligomerization domain-like | 0 | DIRECT |
| JAB1/MPN domain | 0 | DIRECT |
| SAP domain | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| Poly A polymerase C-terminal region-like | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| EPT/RTPC-like | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| SMR domain-like | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| MurD-like peptide ligases, catalytic domain | 0 | DIRECT |
| Creatinase/prolidase N-terminal domain | 0 | DIRECT |
| 4Fe-4S ferredoxins | 0 | DIRECT |
| HRDC-like | 0 | DIRECT |
| YhbY-like | 0 | DIRECT |
| DNA clamp | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| ValRS/IleRS/LeuRS editing domain | 0 | DIRECT |
| Prefoldin | 0 | DIRECT |
| Ypt/Rab-GAP domain of gyp1p | 0 | DIRECT |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| Dihydrofolate reductase-like | 0 | DIRECT |
| Sec63 N-terminal domain-like | 0 | DIRECT |
| Tricorn protease domain 2 | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| MurD-like peptide ligases, peptide-binding domain | 0 | DIRECT |
| BAR/IMD domain-like | 0 | DIRECT |
| Ribulose-phoshate binding barrel | 0 | DIRECT |
| Peptidase/esterase 'gauge' domain | 0 | DIRECT |
| Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
| Translation initiation factor IF3, N-terminal domain | 0 | DIRECT |
| GAF domain-like | 0 | DIRECT |
| TAZ domain | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| Type II DNA topoisomerase | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| Zn-binding ribosomal proteins | 0 | DIRECT |
| HIT-like | 0 | DIRECT |
| DnaJ/Hsp40 cysteine-rich domain | 0 | DIRECT |
| Lipoxigenase | 0 | DIRECT |
| eEF-1beta-like | 0 | DIRECT |
| Tudor/PWWP/MBT | 0 | DIRECT |
| SIS domain | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| HD-domain/PDEase-like | 0 | DIRECT |
| Double Clp-N motif | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| DEK C-terminal domain | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| Smc hinge domain | 0 | DIRECT |
| ADC-like | 0 | DIRECT |
| Ribosomal proteins L15p and L18e | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Tim10-like | 0 | DIRECT |
| Rps17e-like | 0 | DIRECT |
| Amine oxidase N-terminal region | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| Amine oxidase catalytic domain | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| PX domain | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
| Phospholipase C/P1 nuclease | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| Hect, E3 ligase catalytic domain | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| Ran binding protein zinc finger-like | 0 | DIRECT |
| Heme-dependent catalase-like | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | DIRECT |
| GTPase activation domain, GAP | 0 | DIRECT |
| Nucleoside hydrolase | 0 | DIRECT |
| Dimeric alpha+beta barrel | 0 | DIRECT |
| Ribosomal L27 protein-like | 0 | DIRECT |
| Outer arm dynein light chain 1 | 0 | DIRECT |
| Formate/glycerate dehydrogenase catalytic domain-like | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| Globin-like | 0 | DIRECT |
| Mog1p/PsbP-like | 0 | DIRECT |
| Restriction endonuclease-like | 0 | DIRECT |
| RNA-binding domain, RBD | 0.000003242 | DIRECT |
| Thioredoxin-like | 0.00003349 | DIRECT |
| Chaperone J-domain | 0.0003706 | DIRECT |
| WD40 repeat-like | 0.0005202 | DIRECT |
| Nucleic acid-binding proteins | 0.0009313 | DIRECT |
| ARM repeat | 0.00117 | INHERITED FROM: guard cell || stomatal complex || shoot epidermis |
| RING/U-box | 0.001574 | INHERITED FROM: leaf epidermis || phyllome trichome || phyllome epidermis || leaf trichome |
| CAD & PB1 domains | 0.002341 | INHERITED FROM: quiescent center |
| Ribosomal protein S5 domain 2-like | 0.005219 | INHERITED FROM: epidermis || guard cell || shoot epidermal cell || stomatal complex || shoot epidermis |
| P-loop containing nucleoside triphosphate hydrolases | 0.01054 | INHERITED FROM: guard cell |
| HAD-like | 0.0447 | INHERITED FROM: phyllome primordium || ground tissue cell || vascular leaf primordium || parenchyma cell || mesophyll cell |
| Aldolase | 0.09595 | INHERITED FROM: inflorescence meristem || portion of meristem tissue |
| Trimeric LpxA-like enzymes | 0.1665 | INHERITED FROM: portion of ground tissue || ground tissue cell || leaf mesophyll || chlorenchyma || vascular system || portion of vascular tissue || companion cell || parenchyma cell || phloem |
| ClpP/crotonase | 0.1735 | INHERITED FROM: portion of meristem tissue |
| GST C-terminal domain-like | 0.2017 | INHERITED FROM: portion of vascular tissue || phloem |
| SAICAR synthase-like | 0.2269 | INHERITED FROM: root epidermal cell || root epidermis |
| DNA-binding domain | 0.2345 | INHERITED FROM: fruit dehiscence zone || dehiscence zone |
| DNase I-like | 0.2427 | INHERITED FROM: root hair cell || trichoblast |
| CheY-like | 0.3237 | INHERITED FROM: shoot apical meristem || shoot system vascular system || shoot meristem || phyllome vascular system || apical meristem || leaf vascular system || vascular system |
| HLH, helix-loop-helix DNA-binding domain | 0.3383 | INHERITED FROM: root epidermal cell || portion of transmitting tissue || root epidermis |
| Thiolase-like | 0.3666 | INHERITED FROM: leaf epidermis || phyllome trichome || phyllome epidermis || leaf trichome |
| Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.3682 | INHERITED FROM: root primordium || primordium || lateral root primordium |
| GroES-like | 0.4114 | INHERITED FROM: vascular system || portion of vascular tissue |
| Histone-fold | 0.4614 | INHERITED FROM: root primordium || shoot apical meristem || primordium || root apical meristem || lateral root apical meristem || root meristem || lateral root primordium || flower meristem || reproductive shoot apical meristem |
| ABC transporter transmembrane region | 0.501 | INHERITED FROM: portion of ground tissue || vascular bundle |
| Calcium ATPase, transduction domain A | 0.5307 | INHERITED FROM: portion of ground tissue || ground tissue cell || parenchyma cell || mesophyll cell |
| Calcium ATPase, transmembrane domain M | 0.5307 | INHERITED FROM: portion of ground tissue || ground tissue cell || parenchyma cell || mesophyll cell |
| POZ domain | 0.5415 | INHERITED FROM: embryo vascular system || shoot axis cortex || abscission zone || seed coat |
| FYVE/PHD zinc finger | 0.6615 | INHERITED FROM: shoot apical meristem || shoot meristem || apical meristem |
| Nucleotide-diphospho-sugar transferases | 0.8637 | INHERITED FROM: portion of ground tissue || leaf epidermis || ground tissue cell || leaf mesophyll || interfascicular region || trichome || vascular system || portion of vascular tissue || secondary xylem || phyllome epidermis || leaf trichome || phloem |
| MFS general substrate transporter | 0.9185 | INHERITED FROM: phyllome vascular system || vascular system || portion of vascular tissue || root cortex |
| Cullin repeat-like | 0.9309 | INHERITED FROM: portion of ground tissue || root primordium || root hair cell || primordium || vascular system || lateral root cap || root cortex || root epidermal cell || root epidermis || root parenchyma || portion of secretory tissue || root meristem || lateral root primordium || root endodermis |
| Aquaporin-like | 0.9636 | INHERITED FROM: portion of ground tissue || vascular system || portion of vascular tissue || root cortex || root epidermis |
| Bet v1-like | 0.9894 | INHERITED FROM: integument || phyllome primordium || shoot apical meristem || shoot meristem || primordium || apical meristem || trichome || vascular leaf primordium || endosperm || flower meristem |
| Concanavalin A-like lectins/glucanases | 0.9919 | INHERITED FROM: root epidermal cell |
| Adenine nucleotide alpha hydrolases-like | 1 | INHERITED FROM: trichoblast |
| Skp1 dimerisation domain-like | 1 | INHERITED FROM: shoot apical meristem || shoot meristem || apical meristem || cortex || shoot axis cortex || seed coat |
| EF-hand | 1 | INHERITED FROM: chlorenchyma cell || mesophyll cell |
| PR-1-like | 1 | INHERITED FROM: root epidermal cell |
| Cupredoxins | 1 | INHERITED FROM: leaf epidermis || shoot system vascular system || epidermal pavement cell || phyllome trichome || phyllome vascular system || leaf vascular system || trichome || papilla cell || vascular system || sepal vascular system || flower vascular system || cotyledon vascular system || petal vascular system || phyllome epidermis || leaf trichome |
| Clavaminate synthase-like | 1 | INHERITED FROM: integument || flower vascular system || outer integument |
| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 1 | INHERITED FROM: root primordium || primordium || vascular system || cotyledon vascular system || lateral root primordium |
| Cytochrome P450 | 1 | INHERITED FROM: pericarp |
| Heme-dependent peroxidases | 1 | INHERITED FROM: root hair cell || trichoblast |
| DNA-binding pseudobarrel domain | 1 | INHERITED FROM: primordium || ovary placenta || placenta || ovule primordium |
| Subtilisin-like | 1 | INHERITED FROM: shoot system vascular system || phyllome vascular system || leaf vascular system || vascular system |
| UDP-Glycosyltransferase/glycogen phosphorylase | 1 | INHERITED FROM: phyllome primordium || primordium || vascular leaf primordium || lateral root primordium |
| SRF-like | 1 | INHERITED FROM: integument || root cap || apical meristem || parenchyma || root parenchyma || endosperm |
| Cysteine-rich domain | 1 | INHERITED FROM: root epidermal cell || root epidermis |
| NAC domain | 1 | INHERITED FROM: portion of ground tissue || xylem || shoot system vascular system || vascular system || portion of vascular tissue || procambium || root parenchyma |
| L domain-like | 1 | INHERITED FROM: cambium |
| Homeodomain-like | 1 | INHERITED FROM: portion of ground tissue || integument || phyllome primordium || xylem || shoot apical meristem || shoot system vascular system || shoot meristem || primordium || phyllome vascular system || apical meristem || leaf vascular system || trichome || vascular system || portion of vascular tissue || quiescent center || protoxylem || ovary replum || non-hair root epidermal cell || flower meristem |
| (Trans)glycosidases | 1 | INHERITED FROM: endosperm || micropylar endosperm |
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| Signal peptide-binding domain | 0 | Direct |
| E2F-DP heterodimerization region | 0 | Direct |
| Cysteine alpha-hairpin motif | 0 | Direct |
| SH3-domain | 0 | Direct |
| Caspase-like | 0 | Direct |
| RraA-like | 0 | Direct |
| L-aspartase-like | 0 | Direct |
| DNA repair protein MutS, domain I | 0 | Direct |
| VHP, Villin headpiece domain | 0 | Direct |
| SCOP hierarchy in SUPERFAMILY | 0 | Direct |
| ThrRS/AlaRS common domain | 0 | Direct |
| Lipocalins | 0 | Direct |
| LysM domain | 0 | Direct |
| RBP11-like subunits of RNA polymerase | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| TATA-box binding protein-like | 0 | Direct |
| Composite domain of metallo-dependent hydrolases | 0 | Direct |
| RuBisCO, small subunit | 0 | Direct |
| Phosphofructokinase | 0 | Direct |
| S-adenosylmethionine decarboxylase | 0 | Direct |
| BSD domain-like | 0 | Direct |
| Rudiment single hybrid motif | 0 | Direct |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| Cytochrome c oxidase subunit h | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| PUG domain-like | 0 | Direct |
| ADP-ribosylation | 0 | Direct |
| beta and beta-prime subunits of DNA dependent RNA-polymerase | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| LexA/Signal peptidase | 0 | Direct |
| Transcription factor IIA (TFIIA), alpha-helical domain | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| TGS-like | 0 | Direct |
| tRNA-binding arm | 0 | Direct |
| EGF/Laminin | 0 | Direct |
| Cryptochrome/photolyase, N-terminal domain | 0 | Direct |
| LeuD/IlvD-like | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| Oxygen-evolving enhancer protein 3, | 0 | Direct |
| Tubulin C-terminal domain-like | 0 | Direct |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | Direct |
| lambda repressor-like DNA-binding domains | 0 | Direct |
| DNA breaking-rejoining enzymes | 0 | Direct |
| Insert subdomain of RNA polymerase alpha subunit | 0 | Direct |
| MoaD/ThiS | 0 | Direct |
| UROD/MetE-like | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| Creatinase/aminopeptidase | 0 | Direct |
| Thymidylate synthase/dCMP hydroxymethylase | 0 | Direct |
| Nucleotidylyl transferase | 0 | Direct |
| Crambin-like | 0 | Direct |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
| Homocysteine S-methyltransferase | 0 | Direct |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| Carbamate kinase-like | 0 | Direct |
| VC0467-like | 0 | Direct |
| Staphylococcal nuclease | 0 | Direct |
| Putative isomerase YbhE | 0 | Direct |
| YrdC/RibB | 0 | Direct |
| ACT-like | 0 | Direct |
| Class II aaRS ABD-related | 0 | Direct |
| Release factor | 0 | Direct |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| Tautomerase/MIF | 0 | Direct |
| PreATP-grasp domain | 0 | Direct |
| L9 N-domain-like | 0 | Direct |
| Ribosomal protein L1 | 0 | Direct |
| Glutathione synthetase ATP-binding domain-like | 0 | Direct |
| Ribosomal protein S3 C-terminal domain | 0 | Direct |
| RecA protein, C-terminal domain | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| eIF4e-like | 0 | Direct |
| Ribosomal protein L6 | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Electron transport accessory proteins | 0 | Direct |
| Endosomal sorting complex assembly domain | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| Single hybrid motif | 0 | Direct |
| Ribosomal protein L22 | 0 | Direct |
| Chelatase | 0 | Direct |
| FKBP-like | 0 | Direct |
| Metallo-hydrolase/oxidoreductase | 0 | Direct |
| Sec1/munc18-like (SM) proteins | 0 | Direct |
| PLP-binding barrel | 0 | Direct |
| YVTN repeat-like/Quinoprotein amine dehydrogenase | 0 | Direct |
| Translation initiation factor IF3, C-terminal domain | 0 | Direct |
| Mitochondrial glycoprotein MAM33-like | 0 | Direct |
| Tropomyosin | 0 | Direct |
| Clc chloride channel | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| Protein prenylyltransferase | 0 | Direct |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
| Subdomain of clathrin and coatomer appendage domain | 0 | Direct |
| Tubulin nucleotide-binding domain-like | 0 | Direct |
| Gamma-glutamyl cyclotransferase-like | 0 | Direct |
| NAP-like | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| Chlorophyll a-b binding protein | 0 | Direct |
| Transcription factor IIA (TFIIA), beta-barrel domain | 0 | Direct |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
| FMN-linked oxidoreductases | 0 | Direct |
| Pentapeptide repeat-like | 0 | Direct |
| Retrovirus zinc finger-like domains | 0 | Direct |
| Chalcone isomerase | 0 | Direct |
| BolA-like | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | 0 | Direct |
| beta-sandwich domain of Sec23/24 | 0 | Direct |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
| DNA topoisomerase IV, alpha subunit | 0 | Direct |
| Nucleoside diphosphate kinase, NDK | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
| EF-G C-terminal domain-like | 0 | Direct |
| RL5-like | 0 | Direct |
| Saposin | 0 | Direct |
| Folate-binding domain | 0 | Direct |
| ALDH-like | 0 | Direct |
| Peptidyl-tRNA hydrolase-like | 0 | Direct |
| F1F0 ATP synthase subunit C | 0 | Direct |
| Expressed protein At2g23090/F21P24.15 | 0 | Direct |
| FMN-binding split barrel | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Ribonuclease PH domain 2-like | 0 | Direct |
| Enolase C-terminal domain-like | 0 | Direct |
| Heat shock protein 70kD (HSP70), peptide-binding domain | 0 | Direct |
| Hypothetical protein TM0160 | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| Metallo-dependent hydrolases | 0 | Direct |
| Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0 | Direct |
| HSP90 C-terminal domain | 0 | Direct |
| LuxS/MPP-like metallohydrolase | 0 | Direct |
| BAG domain | 0 | Direct |
| Bacterial exopeptidase dimerisation domain | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| LEA14-like | 0 | Direct |
| Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| beta-N-acetylhexosaminidase-like domain | 0 | Direct |
| EB1 dimerisation domain-like | 0 | Direct |
| Macro domain-like | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| LDH C-terminal domain-like | 0 | Direct |
| Radical SAM enzymes | 0 | Direct |
| N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 | 0 | Direct |
| Chorismate mutase II | 0 | Direct |
| Activating enzymes of the ubiquitin-like proteins | 0 | Direct |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
| FF domain | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| RNase III domain-like | 0 | Direct |
| ISP domain | 0 | Direct |
| GlnB-like | 0 | Direct |
| Peptidyl-tRNA hydrolase II | 0 | Direct |
| LigT-like | 0 | Direct |
| Arp2/3 complex subunits | 0 | Direct |
| alpha/beta knot | 0 | Direct |
| Chromo domain-like | 0 | Direct |
| Serine metabolism enzymes domain | 0 | Direct |
| L28p-like | 0 | Direct |
| Mss4-like | 0 | Direct |
| FAH | 0 | Direct |
| Band 7/SPFH domain | 0 | Direct |
| SH2 domain | 0 | Direct |
| Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
| Ferritin-like | 0 | Direct |
| Prokaryotic type KH domain (KH-domain type II) | 0 | Direct |
| Heme oxygenase-like | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| Diaminopimelate epimerase-like | 0 | Direct |
| WW domain | 0 | Direct |
| Elongation factor TFIIS domain 2 | 0 | Direct |
| S13-like H2TH domain | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| ITPase-like | 0 | Direct |
| beta-carbonic anhydrase, cab | 0 | Direct |
| Rubredoxin-like | 0 | Direct |
| DNA repair protein MutS, domain II | 0 | Direct |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | Direct |
| Ribosomal protein L16p/L10e | 0 | Direct |
| ssDNA-binding transcriptional regulator domain | 0 | Direct |
| Carbon-nitrogen hydrolase | 0 | Direct |
| GroEL-intermediate domain like | 0 | Direct |
| LanC-like | 0 | Direct |
| AlbA-like | 0 | Direct |
| Alpha-L RNA-binding motif | 0 | Direct |
| Clathrin adaptor appendage domain | 0 | Direct |
| Actin-crosslinking proteins | 0 | Direct |
| Heat shock protein 70kD (HSP70), C-terminal subdomain | 0 | Direct |
| GroEL apical domain-like | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| Trm112p-like | 0 | Direct |
| HIT/MYND zinc finger-like | 0 | Direct |
| S15/NS1 RNA-binding domain | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | Direct |
| FAD-linked oxidoreductase | 0 | Direct |
| Flavoproteins | 0 | Direct |
| Pseudouridine synthase | 0 | Direct |
| MOSC N-terminal domain-like | 0 | Direct |
| PriA/YqbF domain | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | Direct |
| Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
| OMPA-like | 0 | Direct |
| Allene oxide cyclase-like | 0 | Direct |
| Cytochrome c | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
| Probable bacterial effector-binding domain | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| GINS helical bundle-like | 0 | Direct |
| Class II aaRS and biotin synthetases | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| Enolase N-terminal domain-like | 0 | Direct |
| Mitochondrial carrier | 0 | Direct |
| eIF1-like | 0 | Direct |
| Mediator hinge subcomplex-like | 0 | Direct |
| Initiation factor IF2/eIF5b, domain 3 | 0 | Direct |
| FtsH protease domain-like | 0 | Direct |
| Seven-hairpin glycosidases | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| RplX-like | 0 | Direct |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
| Thioesterase/thiol ester dehydrase-isomerase | 0 | Direct |
| CYTH-like phosphatases | 0 | Direct |
| Inorganic pyrophosphatase | 0 | Direct |
| SAM/Pointed domain | 0 | Direct |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | Direct |
| Ammonium transporter | 0 | Direct |
| Ribosomal protein S10 | 0 | Direct |
| Carbohydrate phosphatase | 0 | Direct |
| AF1104-like | 0 | Direct |
| Formyltransferase | 0 | Direct |
| alpha-helical ferredoxin | 0 | Direct |
| post-AAA+ oligomerization domain-like | 0 | Direct |
| JAB1/MPN domain | 0 | Direct |
| SAP domain | 0 | Direct |
| R3H domain | 0 | Direct |
| Poly A polymerase C-terminal region-like | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| EPT/RTPC-like | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| SMR domain-like | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| MurD-like peptide ligases, catalytic domain | 0 | Direct |
| Creatinase/prolidase N-terminal domain | 0 | Direct |
| 4Fe-4S ferredoxins | 0 | Direct |
| HRDC-like | 0 | Direct |
| YhbY-like | 0 | Direct |
| DNA clamp | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| ValRS/IleRS/LeuRS editing domain | 0 | Direct |
| Prefoldin | 0 | Direct |
| Ypt/Rab-GAP domain of gyp1p | 0 | Direct |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| Dihydrofolate reductase-like | 0 | Direct |
| Sec63 N-terminal domain-like | 0 | Direct |
| Tricorn protease domain 2 | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| MurD-like peptide ligases, peptide-binding domain | 0 | Direct |
| BAR/IMD domain-like | 0 | Direct |
| Ribulose-phoshate binding barrel | 0 | Direct |
| Peptidase/esterase 'gauge' domain | 0 | Direct |
| Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
| Translation initiation factor IF3, N-terminal domain | 0 | Direct |
| GAF domain-like | 0 | Direct |
| TAZ domain | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| Type II DNA topoisomerase | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| Zn-binding ribosomal proteins | 0 | Direct |
| HIT-like | 0 | Direct |
| DnaJ/Hsp40 cysteine-rich domain | 0 | Direct |
| Lipoxigenase | 0 | Direct |
| eEF-1beta-like | 0 | Direct |
| Tudor/PWWP/MBT | 0 | Direct |
| SIS domain | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| HD-domain/PDEase-like | 0 | Direct |
| Double Clp-N motif | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| DEK C-terminal domain | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| Smc hinge domain | 0 | Direct |
| ADC-like | 0 | Direct |
| Ribosomal proteins L15p and L18e | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| Tim10-like | 0 | Direct |
| Rps17e-like | 0 | Direct |
| Amine oxidase N-terminal region | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| Amine oxidase catalytic domain | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| PX domain | 0 | Direct |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
| Phospholipase C/P1 nuclease | 0 | Direct |
| RibA-like | 0 | Direct |
| Hect, E3 ligase catalytic domain | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| NHL repeat | 0 | Direct |
| HesB-like domain | 0 | Direct |
| Ran binding protein zinc finger-like | 0 | Direct |
| Heme-dependent catalase-like | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | Direct |
| GTPase activation domain, GAP | 0 | Direct |
| Nucleoside hydrolase | 0 | Direct |
| Dimeric alpha+beta barrel | 0 | Direct |
| Ribosomal L27 protein-like | 0 | Direct |
| Outer arm dynein light chain 1 | 0 | Direct |
| Formate/glycerate dehydrogenase catalytic domain-like | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| Globin-like | 0 | Direct |
| Mog1p/PsbP-like | 0 | Direct |
| Restriction endonuclease-like | 0 | Direct |
| RNA-binding domain, RBD | 0.000003242 | Direct |
| Thioredoxin-like | 0.00003349 | Direct |
| Chaperone J-domain | 0.0003706 | Direct |
| WD40 repeat-like | 0.0005202 | Direct |
| Nucleic acid-binding proteins | 0.0009313 | Direct |
| ARM repeat | 0.00117 | Inherited |
| RING/U-box | 0.001574 | Inherited |
| CAD & PB1 domains | 0.002341 | Inherited |
| Ribosomal protein S5 domain 2-like | 0.005219 | Inherited |
| P-loop containing nucleoside triphosphate hydrolases | 0.01054 | Inherited |
| HAD-like | 0.0447 | Inherited |
| Aldolase | 0.09595 | Inherited |
| Trimeric LpxA-like enzymes | 0.1665 | Inherited |
| ClpP/crotonase | 0.1735 | Inherited |
| GST C-terminal domain-like | 0.2017 | Inherited |
| SAICAR synthase-like | 0.2269 | Inherited |
| DNA-binding domain | 0.2345 | Inherited |
| DNase I-like | 0.2427 | Inherited |
| CheY-like | 0.3237 | Inherited |
| HLH, helix-loop-helix DNA-binding domain | 0.3383 | Inherited |
| Thiolase-like | 0.3666 | Inherited |
| Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.3682 | Inherited |
| GroES-like | 0.4114 | Inherited |
| Histone-fold | 0.4614 | Inherited |
| ABC transporter transmembrane region | 0.501 | Inherited |
| Calcium ATPase, transduction domain A | 0.5307 | Inherited |
| Calcium ATPase, transmembrane domain M | 0.5307 | Inherited |
| POZ domain | 0.5415 | Inherited |
| FYVE/PHD zinc finger | 0.6615 | Inherited |
| Nucleotide-diphospho-sugar transferases | 0.8637 | Inherited |
| MFS general substrate transporter | 0.9185 | Inherited |
| Cullin repeat-like | 0.9309 | Inherited |
| Aquaporin-like | 0.9636 | Inherited |
| Bet v1-like | 0.9894 | Inherited |
| Concanavalin A-like lectins/glucanases | 0.9919 | Inherited |
| Adenine nucleotide alpha hydrolases-like | 1 | Inherited |
| Skp1 dimerisation domain-like | 1 | Inherited |
| EF-hand | 1 | Inherited |
| PR-1-like | 1 | Inherited |
| Cupredoxins | 1 | Inherited |
| Clavaminate synthase-like | 1 | Inherited |
| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 1 | Inherited |
| Cytochrome P450 | 1 | Inherited |
| Heme-dependent peroxidases | 1 | Inherited |
| DNA-binding pseudobarrel domain | 1 | Inherited |
| Subtilisin-like | 1 | Inherited |
| UDP-Glycosyltransferase/glycogen phosphorylase | 1 | Inherited |
| SRF-like | 1 | Inherited |
| Cysteine-rich domain | 1 | Inherited |
| NAC domain | 1 | Inherited |
| L domain-like | 1 | Inherited |
| Homeodomain-like | 1 | Inherited |
| (Trans)glycosidases | 1 | Inherited |
LINKTO: Domain2BO Download and Domain2BO Algorithm
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Family( show details)
Highlighted in gray are those with FDR_all>0.001
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| Proteasome subunits | 0 | DIRECT |
| GroEL-like chaperone, apical domain | 0 | DIRECT |
| DNA repair glycosylase, 2 C-terminal domains | 0 | DIRECT |
| Cytochrome c oxidase Subunit F | 0 | DIRECT |
| Galectin (animal S-lectin) | 0 | DIRECT |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| IF2B-like | 0 | DIRECT |
| EF-G/eEF-2 domains III and V | 0 | DIRECT |
| Leucine aminopeptidase, C-terminal domain | 0 | DIRECT |
| Clathrin coat assembly domain | 0 | DIRECT |
| GAPDH-like | 0 | DIRECT |
| Class I aminoacyl-tRNA synthetases (RS), catalytic domain | 0 | DIRECT |
| Pseudouridine synthase II TruB | 0 | DIRECT |
| Heme-dependent catalases | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
| Plant lipoxigenases | 0 | DIRECT |
| Tubulin, GTPase domain | 0 | DIRECT |
| Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain | 0 | DIRECT |
| Lipoxigenase N-terminal domain | 0 | DIRECT |
| Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0 | DIRECT |
| DNase I-like | 0 | DIRECT |
| Carbon-carbon bond hydrolase | 0 | DIRECT |
| Bacterial PLC | 0 | DIRECT |
| Glycerol-3-phosphate dehydrogenase | 0 | DIRECT |
| Aminoacid dehydrogenases | 0 | DIRECT |
| NADPH-cytochrome p450 reductase-like | 0 | DIRECT |
| EB1 dimerisation domain-like | 0 | DIRECT |
| Cryptochrome/photolyase, N-terminal domain | 0 | DIRECT |
| DNA polymerase III clamp loader subunits, C-terminal domain | 0 | DIRECT |
| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC | 0 | DIRECT |
| gamma-carbonic anhydrase-like | 0 | DIRECT |
| Macro domain | 0 | DIRECT |
| SH2 domain | 0 | DIRECT |
| VC0467-like | 0 | DIRECT |
| Hypoxia-inducible factor HIF ihhibitor (FIH1) | 0 | DIRECT |
| Aminomethyltransferase folate-binding domain | 0 | DIRECT |
| Sigma4 domain | 0 | DIRECT |
| NAD kinase-like | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain | 0 | DIRECT |
| LeuD-like | 0 | DIRECT |
| Prolyl oligopeptidase, N-terminal domain | 0 | DIRECT |
| Allosteric chorismate mutase | 0 | DIRECT |
| Tim10/DDP | 0 | DIRECT |
| G domain-linked domain | 0 | DIRECT |
| Crambin-like | 0 | DIRECT |
| T7 RNA polymerase | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | DIRECT |
| Poly A polymerase C-terminal region-like | 0 | DIRECT |
| N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 | 0 | DIRECT |
| Trunk domain of Sec23/24 | 0 | DIRECT |
| RWD domain | 0 | DIRECT |
| CoA-binding domain | 0 | DIRECT |
| PAPS reductase-like | 0 | DIRECT |
| Formyltransferase | 0 | DIRECT |
| (Glycosyl)asparaginase | 0 | DIRECT |
| RuBisCo LSMT catalytic domain | 0 | DIRECT |
| Translation initiation factor IF3, N-terminal domain | 0 | DIRECT |
| Spermidine synthase | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| HMGL-like | 0 | DIRECT |
| MPP-like | 0 | DIRECT |
| DNA topoisomerase IV, alpha subunit | 0 | DIRECT |
| Phoshoinositide 3-kinase (PI3K), catalytic domain | 0 | DIRECT |
| Hermes transposase-like | 0 | DIRECT |
| SpoU-like RNA 2'-O ribose methyltransferase | 0 | DIRECT |
| UEV domain | 0 | DIRECT |
| HIT (HINT, histidine triad) family of protein kinase-interacting proteins | 0 | DIRECT |
| Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
| RNA polymerase II subunit RBP4 (RpoF) | 0 | DIRECT |
| Cytokinin dehydrogenase 1 | 0 | DIRECT |
| P1 nuclease | 0 | DIRECT |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| Homoserine dehydrogenase-like | 0 | DIRECT |
| Protein prenylyltransferase | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), intermediate domain | 0 | DIRECT |
| HAT/Suf repeat | 0 | DIRECT |
| WW domain | 0 | DIRECT |
| UDP-glucose pyrophosphorylase | 0 | DIRECT |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | DIRECT |
| Cold shock DNA-binding domain-like | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Reductases | 0 | DIRECT |
| E2F dimerization segment | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), apical domain | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| PWWP domain | 0 | DIRECT |
| Serine acetyltransferase | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| Rps19E-like | 0 | DIRECT |
| beta-Phosphoglucomutase-like | 0 | DIRECT |
| HspBP1 domain | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| ZZ domain | 0 | DIRECT |
| Tetramerization domain of potassium channels | 0 | DIRECT |
| Methionine aminopeptidase, insert domain | 0 | DIRECT |
| RuBisCO, small subunit | 0 | DIRECT |
| HCP-like | 0 | DIRECT |
| UBA domain | 0 | DIRECT |
| Peptidyl-tRNA hydrolase II | 0 | DIRECT |
| XPF/Rad1/Mus81 nuclease | 0 | DIRECT |
| Nitrogenase iron protein-like | 0 | DIRECT |
| Formate/glycerate dehydrogenases, NAD-domain | 0 | DIRECT |
| 28-residue LRR | 0 | DIRECT |
| Transcription factor IIA (TFIIA), alpha-helical domain | 0 | DIRECT |
| GABARAP-like | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Poly A polymerase head domain-like | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| PyrH-like | 0 | DIRECT |
| Transcriptional coactivator PC4 C-terminal domain | 0 | DIRECT |
| Thymidylate synthase/dCMP hydroxymethylase | 0 | DIRECT |
| Mitochondrial glycoprotein MAM33-like | 0 | DIRECT |
| Hypothetical protein TM0160 | 0 | DIRECT |
| RNA polymerase alpha subunit dimerisation domain | 0 | DIRECT |
| PDI-like | 0 | DIRECT |
| Band 7/SPFH domain | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain | 0 | DIRECT |
| Nucleoside hydrolase | 0 | DIRECT |
| glucose-1-phosphate thymidylyltransferase | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| 3-Methyladenine DNA glycosylase I (Tag) | 0 | DIRECT |
| Swaposin | 0 | DIRECT |
| 5' to 3' exonuclease catalytic domain | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), catalytic domain | 0 | DIRECT |
| GAF domain | 0 | DIRECT |
| Ferredoxin domains from multidomain proteins | 0 | DIRECT |
| PaaI/YdiI-like | 0 | DIRECT |
| Branched-chain alpha-keto acid dehydrogenase Pyr module | 0 | DIRECT |
| L23p | 0 | DIRECT |
| Threonyl-tRNA synthetase (ThrRS), second 'additional' domain | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| BCR-homology GTPase activation domain (BH-domain) | 0 | DIRECT |
| Anticodon-binding domain of Class II aaRS | 0 | DIRECT |
| MioX-like | 0 | DIRECT |
| Tryptophan biosynthesis enzymes | 0 | DIRECT |
| Ribosomal proteins L24p and L21e | 0 | DIRECT |
| Gtf glycosyltransferase | 0 | DIRECT |
| Starch-binding domain | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| Ferritin | 0 | DIRECT |
| Myf domain | 0 | DIRECT |
| FAH | 0 | DIRECT |
| Sm motif of small nuclear ribonucleoproteins, SNRNP | 0 | DIRECT |
| S-adenosylmethionine decarboxylase | 0 | DIRECT |
| VPS23 C-terminal domain | 0 | DIRECT |
| Plant stress-induced protein | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| Ribosomal protein S13 | 0 | DIRECT |
| Heat shock protein 90, HSP90, N-terminal domain | 0 | DIRECT |
| AlkB-like | 0 | DIRECT |
| Ribosomal protein L18 and S11 | 0 | DIRECT |
| Penta-EF-hand proteins | 0 | DIRECT |
| Hypothetical protein HI1317 | 0 | DIRECT |
| Ubiquitin carboxyl-terminal hydrolase UCH-L | 0 | DIRECT |
| Prokaryotic type KH domain (KH-domain type II) | 0 | DIRECT |
| Type 1 signal peptidase | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| Release factor | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| rRNA adenine dimethylase-like | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| LysM domain | 0 | DIRECT |
| Tudor domain | 0 | DIRECT |
| Glucose 6-phosphate dehydrogenase-like | 0 | DIRECT |
| beta-CASP RNA-metabolising hydrolases | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| SWIRM domain | 0 | DIRECT |
| Initiation factor IF2/eIF5b, domain 3 | 0 | DIRECT |
| NOL1/NOP2/sun | 0 | DIRECT |
| Eukaryotic DNA topoisomerase I, catalytic core | 0 | DIRECT |
| Subtilase propeptides/inhibitors | 0 | DIRECT |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
| DEK C-terminal domain | 0 | DIRECT |
| Retrovirus zinc finger-like domains | 0 | DIRECT |
| RNA-polymerase beta-prime | 0 | DIRECT |
| Chalcone isomerase | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| Cytidylyltransferase | 0 | DIRECT |
| HEAT repeat | 0 | DIRECT |
| Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| Homocysteine S-methyltransferase | 0 | DIRECT |
| Ribonuclease H | 0 | DIRECT |
| Flavin-binding PAS domain | 0 | DIRECT |
| Glycerol-3-phosphate transporter | 0 | DIRECT |
| HSP90 C-terminal domain | 0 | DIRECT |
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain | 0 | DIRECT |
| C-terminal domain of ribosomal protein L2 | 0 | DIRECT |
| Chromo barrel domain | 0 | DIRECT |
| B56-like | 0 | DIRECT |
| Ribosomal S5 protein, N-terminal domain | 0 | DIRECT |
| Enolase N-terminal domain-like | 0 | DIRECT |
| NAP-like | 0 | DIRECT |
| Ribosomal protein S27e | 0 | DIRECT |
| PsbO-like | 0 | DIRECT |
| Ribosomal protein L10e | 0 | DIRECT |
| Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| Anticodon-binding domain | 0 | DIRECT |
| ValRS/IleRS/LeuRS editing domain | 0 | DIRECT |
| BAR domain | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| Internalin LRR domain | 0 | DIRECT |
| DNA polymerase processivity factor | 0 | DIRECT |
| Ypt/Rab-GAP domain of gyp1p | 0 | DIRECT |
| NagD-like | 0 | DIRECT |
| Amine oxidase catalytic domain | 0 | DIRECT |
| Amylase, catalytic domain | 0 | DIRECT |
| Chlorophyll a-b binding protein | 0 | DIRECT |
| Arginine methyltransferase | 0 | DIRECT |
| Arp2/3 complex subunits | 0 | DIRECT |
| RecA protein, C-terminal domain | 0 | DIRECT |
| Cystatins | 0 | DIRECT |
| Double Clp-N motif | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| Ribosomal protein S15 | 0 | DIRECT |
| RNase III catalytic domain-like | 0 | DIRECT |
| Diacylglycerol kinase-like | 0 | DIRECT |
| LON domain-like | 0 | DIRECT |
| Rubredoxin | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| COMT-like | 0 | DIRECT |
| Clathrin adaptor appendage, alpha and beta chain-specific domain | 0 | DIRECT |
| Prefoldin | 0 | DIRECT |
| ATP sulfurylase N-terminal domain | 0 | DIRECT |
| RIO1-like kinases | 0 | DIRECT |
| SAM (sterile alpha motif) domain | 0 | DIRECT |
| MIF-related | 0 | DIRECT |
| Ran-binding domain | 0 | DIRECT |
| DNA repair protein MutS, domain I | 0 | DIRECT |
| L-aspartase/fumarase | 0 | DIRECT |
| Creatinase/aminopeptidase | 0 | DIRECT |
| Mitochondrial carrier | 0 | DIRECT |
| Ribonucleotide reductase-like | 0 | DIRECT |
| Class-II DAHP synthetase | 0 | DIRECT |
| Heat shock protein 70kD (HSP70), peptide-binding domain | 0 | DIRECT |
| beta-N-acetylhexosaminidase catalytic domain | 0 | DIRECT |
| Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| Smr domain | 0 | DIRECT |
| Eps15 homology domain (EH domain) | 0 | DIRECT |
| SerA intervening domain-like | 0 | DIRECT |
| Clc chloride channel | 0 | DIRECT |
| Ring hydroxylating alpha subunit ISP domain | 0 | DIRECT |
| Ribosomal protein L5 | 0 | DIRECT |
| Hypothetical protein TM1112 | 0 | DIRECT |
| Receiver domain of the ethylene receptor | 0 | DIRECT |
| Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| 4HBT-like | 0 | DIRECT |
| DNA gyrase/MutL, second domain | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| Clp protease, ClpP subunit | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| Cobalamin-independent methionine synthase | 0 | DIRECT |
| UBX domain | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | DIRECT |
| Aspartokinase allosteric domain-like | 0 | DIRECT |
| BAG domain | 0 | DIRECT |
| ECR1 N-terminal domain-like | 0 | DIRECT |
| EXOSC10 HRDC domain-like | 0 | DIRECT |
| RNA methyltransferase FtsJ | 0 | DIRECT |
| Choline kinase | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| Sec1/munc18-like (SM) proteins | 0 | DIRECT |
| RNB domain-like | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| 5' nucleotidase-like | 0 | DIRECT |
| 6-phosphogluconate dehydrogenase-like, N-terminal domain | 0 | DIRECT |
| Gelsolin-like | 0 | DIRECT |
| Dihydrofolate reductases | 0 | DIRECT |
| Amine oxidase N-terminal region | 0 | DIRECT |
| Branched-chain alpha-keto acid dehydrogenase PP module | 0 | DIRECT |
| Linker histone H1/H5 | 0 | DIRECT |
| MYND zinc finger | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| Cell cycle transcription factor e2f-dp | 0 | DIRECT |
| Formate/glycerate dehydrogenases, substrate-binding domain | 0 | DIRECT |
| Acyl-ACP thioesterase-like | 0 | DIRECT |
| HD domain | 0 | DIRECT |
| Lactate & malate dehydrogenases, C-terminal domain | 0 | DIRECT |
| alpha-Amylases, C-terminal beta-sheet domain | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| Ribosomal protein S10 | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| Pirin-like | 0 | DIRECT |
| Ran binding protein zinc finger-like | 0 | DIRECT |
| Dihydrodipicolinate reductase-like | 0 | DIRECT |
| Ribosomal protein S27a | 0 | DIRECT |
| DJ-1/PfpI | 0 | DIRECT |
| GAT domain | 0 | DIRECT |
| Neurolysin-like | 0 | DIRECT |
| Pseudouridine synthase I TruA | 0 | DIRECT |
| Lesion bypass DNA polymerase (Y-family), catalytic domain | 0 | DIRECT |
| Enolase | 0 | DIRECT |
| Elongation factor TFIIS domain 2 | 0 | DIRECT |
| LplA-like | 0 | DIRECT |
| NadC N-terminal domain-like | 0 | DIRECT |
| RNase Z-like | 0 | DIRECT |
| PX domain | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | DIRECT |
| Adenosine-5'phosphosulfate kinase (APS kinase) | 0 | DIRECT |
| FMN-linked oxidoreductases | 0 | DIRECT |
| Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain | 0 | DIRECT |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
| AMPK-beta glycogen binding domain-like | 0 | DIRECT |
| Phosphorelay protein-like | 0 | DIRECT |
| SAP domain | 0 | DIRECT |
| Inorganic pyrophosphatase | 0 | DIRECT |
| Tail specific protease, catalytic domain | 0 | DIRECT |
| Rieske iron-sulfur protein (ISP) | 0 | DIRECT |
| NifU C-terminal domain-like | 0 | DIRECT |
| Glyoxalase I (lactoylglutathione lyase) | 0 | DIRECT |
| Folylpolyglutamate synthetase | 0 | DIRECT |
| Sec63 C-terminal domain-like | 0 | DIRECT |
| RelA/SpoT domain | 0 | DIRECT |
| eEF-1beta-like | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| GroES | 0 | DIRECT |
| PsbP-like | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| Deoxycytidylate deaminase-like | 0 | DIRECT |
| Class I alpha-1;2-mannosidase, catalytic domain | 0 | DIRECT |
| FtsH protease domain-like | 0 | DIRECT |
| Smc hinge domain | 0 | DIRECT |
| Ribosomal protein L22 | 0 | DIRECT |
| PNP-oxidase like | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| Cdc48 N-terminal domain-like | 0 | DIRECT |
| monodomain cytochrome c | 0 | DIRECT |
| VHP, Villin headpiece domain | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| GroEL-like chaperone, intermediate domain | 0 | DIRECT |
| Ribosomal proteins L15p and L18e | 0 | DIRECT |
| Outer arm dynein light chain 1 | 0 | DIRECT |
| Ribosomal protein L19 | 0 | DIRECT |
| LEA14-like | 0 | DIRECT |
| Group II chaperonin (CCT, TRIC), ATPase domain | 0 | DIRECT |
| Gastric lipase | 0 | DIRECT |
| Leucine aminopeptidase (Aminopeptidase A), N-terminal domain | 0 | DIRECT |
| Staphylococcal nuclease | 0 | DIRECT |
| Ribosomal protein L35ae | 0 | DIRECT |
| Cytochrome b5 | 0 | DIRECT |
| AF1104-like | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| Rps17e-like | 0 | DIRECT |
| Cytochrome p450 reductase N-terminal domain-like | 0 | DIRECT |
| Alpha-adaptin ear subdomain-like | 0 | DIRECT |
| Hsp90 middle domain | 0 | DIRECT |
| Inositol monophosphatase/fructose-1,6-bisphosphatase-like | 0 | DIRECT |
| N-type ATP pyrophosphatases | 0 | DIRECT |
| IPP isomerase-like | 0 | DIRECT |
| PUG domain | 0 | DIRECT |
| BSD domain | 0 | DIRECT |
| Prolyl oligopeptidase, C-terminal domain | 0 | DIRECT |
| beta-carbonic anhydrase, cab | 0 | DIRECT |
| Thioredoxin-like 2Fe-2S ferredoxin | 0 | DIRECT |
| Thiolase-related | 0 | DIRECT |
| Zf-UBP | 0 | DIRECT |
| TAZ domain | 0 | DIRECT |
| Shikimate kinase (AroK) | 0 | DIRECT |
| F1F0 ATP synthase subunit C | 0 | DIRECT |
| GlmU C-terminal domain-like | 0 | DIRECT |
| Signal peptide-binding domain | 0 | DIRECT |
| Gamma-glutamyl cyclotransferase-like | 0 | DIRECT |
| Ribosomal protein L1 | 0 | DIRECT |
| D-ribulose-5-phosphate 3-epimerase | 0 | DIRECT |
| ALDH-like | 0 | DIRECT |
| Eukaryotic type heme oxygenase | 0 | DIRECT |
| PA domain | 0 | DIRECT |
| Translation initiation factor IF3, C-terminal domain | 0 | DIRECT |
| Plus3 | 0 | DIRECT |
| Alanine racemase-like, N-terminal domain | 0 | DIRECT |
| Tropomyosin | 0 | DIRECT |
| NadC C-terminal domain-like | 0 | DIRECT |
| Nucleoside diphosphate kinase, NDK | 0 | DIRECT |
| Cytochrome c oxidase subunit h | 0 | DIRECT |
| SelR domain | 0 | DIRECT |
| 2Fe-2S ferredoxin-related | 0 | DIRECT |
| Sedlin (SEDL) | 0 | DIRECT |
| Ammonium transporter | 0 | DIRECT |
| Chromo domain | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| PdxS-like | 0 | DIRECT |
| Ribosomal protein L3 | 0 | DIRECT |
| VHS domain | 0 | DIRECT |
| Pseudouridine synthase RsuA/RluD | 0 | DIRECT |
| Plant transcriptional regulator PBF-2 | 0 | DIRECT |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| Translation initiation factor eIF4e | 0 | DIRECT |
| Bacterial exopeptidase dimerisation domain | 0 | DIRECT |
| DNA replication initiator (cdc21/cdc54) N-terminal domain | 0 | DIRECT |
| Poly(ADP-ribose) polymerase, C-terminal domain | 0 | DIRECT |
| Phosphofructokinase | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| CAT-like | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| Ribosomal protein L6 | 0 | DIRECT |
| Epoxide hydrolase | 0 | DIRECT |
| Class I aldolase | 0 | DIRECT |
| Ribonuclease PH domain 2-like | 0 | DIRECT |
| Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | DIRECT |
| FucT-like | 0 | DIRECT |
| Calnexin/calreticulin | 0 | DIRECT |
| 1,3-glucuronyltransferase | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | DIRECT |
| Phosphoribosylpyrophosphate synthetase-like | 0 | DIRECT |
| MutT-like | 0 | DIRECT |
| WrbA-like | 0 | DIRECT |
| Clathrin adaptor core protein | 0 | DIRECT |
| GDI-like N domain | 0 | DIRECT |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
| GroEL chaperone, ATPase domain | 0 | DIRECT |
| Hypothetical protein At2g34160 | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| Transcription factor IIA (TFIIA), beta-barrel domain | 0 | DIRECT |
| Type II DNA topoisomerase | 0 | DIRECT |
| BphP N-terminal domain-like | 0 | DIRECT |
| BC ATP-binding domain-like | 0 | DIRECT |
| NLI interacting factor-like phosphatase | 0 | DIRECT |
| Heat shock protein 70kD (HSP70), C-terminal subdomain | 0 | DIRECT |
| Ribosomal protein S3 C-terminal domain | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| PB1 domain | 0 | DIRECT |
| Biotinyl/lipoyl-carrier proteins and domains | 0 | DIRECT |
| Translational machinery components | 0 | DIRECT |
| DnaJ/Hsp40 cysteine-rich domain | 0 | DIRECT |
| Tubulin, C-terminal domain | 0 | DIRECT |
| SOUL heme-binding protein | 0 | DIRECT |
| PhzC/PhzF-like | 0 | DIRECT |
| Methyl-CpG-binding domain, MBD | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| ATP sulfurylase catalytic domain | 0 | DIRECT |
| Cell cycle arrest protein BUB3 | 0 | DIRECT |
| PUA domain | 0 | DIRECT |
| PCI domain (PINT motif) | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| BC N-terminal domain-like | 0 | DIRECT |
| N-acetyl-l-glutamate kinase | 0 | DIRECT |
| HAL/PAL-like | 0 | DIRECT |
| Phytochrome-specific domain | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| Biotin dependent carboxylase carboxyltransferase domain | 0 | DIRECT |
| Ribosomal protein L37e | 0 | DIRECT |
| EDF1-like | 0 | DIRECT |
| Nucleotide and nucleoside kinases | 0 | DIRECT |
| YhbY-like | 0 | DIRECT |
| SufE-like | 0 | DIRECT |
| RplX-like | 0 | DIRECT |
| Allene oxide cyclase-like | 0 | DIRECT |
| Insert subdomain of RNA polymerase alpha subunit | 0 | DIRECT |
| Ribonuclease PH domain 1-like | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| Tetrahydrofolate dehydrogenase/cyclohydrolase | 0 | DIRECT |
| Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | DIRECT |
| TRM1-like | 0 | DIRECT |
| Pentapeptide repeats | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| Ribosomal L27 protein | 0 | DIRECT |
| FKBP immunophilin/proline isomerase | 0 | DIRECT |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| BC C-terminal domain-like | 0 | DIRECT |
| Ubiquitin activating enzymes (UBA) | 0 | DIRECT |
| beta-sandwich domain of Sec23/24 | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| Oxygen-evolving enhancer protein 3, | 0 | DIRECT |
| Hect, E3 ligase catalytic domain | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| Molybdenum cofactor biosynthesis protein MoeB | 0 | DIRECT |
| Met-10+ protein-like | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| NADPH-cytochrome p450 reductase FAD-binding domain-like | 0 | DIRECT |
| eIF5a N-terminal domain-like | 0 | DIRECT |
| Leukotriene A4 hydrolase catalytic domain | 0 | DIRECT |
| LDH N-terminal domain-like | 0 | DIRECT |
| Protein prenyltransferases | 0 | DIRECT |
| RNA-polymerase beta | 0 | DIRECT |
| Sec63 N-terminal domain | 0 | DIRECT |
| YicI N-terminal domain-like | 0 | DIRECT |
| Canonical RBD | 0.00001135 | DIRECT |
| Chaperone J-domain | 0.0002842 | DIRECT |
| WD40-repeat | 0.0008623 | DIRECT |
| GARP response regulators | 0.005973 | INHERITED FROM: shoot system vascular system || shoot meristem || phyllome vascular system || leaf vascular system || trichome || vascular system || phloem |
| G proteins | 0.01515 | INHERITED FROM: epidermis || guard cell || shoot epidermal cell || stomatal complex || shoot epidermis |
| Actin/HSP70 | 0.02723 | INHERITED FROM: trichome || parenchyma |
| Glycosyl transferases group 1 | 0.08214 | INHERITED FROM: shoot system vascular system || phyllome vascular system || leaf vascular system || cotyledon vascular system |
| Cyclin | 0.09612 | INHERITED FROM: phyllome primordium |
| RING finger domain, C3HC4 | 0.1583 | INHERITED FROM: leaf epidermis || phyllome trichome || trichome || phyllome epidermis || leaf trichome |
| Galactosyltransferase LgtC | 0.1833 | INHERITED FROM: portion of ground tissue || xylem || trichome || vascular system || portion of vascular tissue || abscission zone || secondary xylem |
| Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta | 0.2809 | INHERITED FROM: root epidermal cell || root epidermis |
| U-box | 0.2932 | INHERITED FROM: chlorenchyma || cotyledon vascular system |
| GCC-box binding domain | 0.3249 | INHERITED FROM: fruit dehiscence zone || dehiscence zone |
| HLH, helix-loop-helix DNA-binding domain | 0.3249 | INHERITED FROM: root epidermal cell || portion of transmitting tissue || root epidermis |
| Trehalose-phosphatase | 0.344 | INHERITED FROM: phyllome primordium || primordium || vascular leaf primordium |
| Glutathione S-transferase (GST), C-terminal domain | 0.3637 | INHERITED FROM: phloem |
| Leucine zipper domain | 0.3926 | INHERITED FROM: pericycle |
| Glutathione S-transferase (GST), N-terminal domain | 0.4026 | INHERITED FROM: portion of vascular tissue || phloem |
| PHD domain | 0.4688 | INHERITED FROM: shoot apical meristem || shoot meristem || apical meristem |
| CheY-related | 0.4747 | INHERITED FROM: shoot system vascular system || shoot meristem || phyllome vascular system || leaf vascular system || trichome || vascular system |
| Alcohol dehydrogenase-like, C-terminal domain | 0.503 | INHERITED FROM: vascular system || portion of vascular tissue |
| Trehalose-6-phosphate synthase, OtsA | 0.5108 | INHERITED FROM: phyllome primordium || primordium || vascular leaf primordium |
| Alcohol dehydrogenase-like, N-terminal domain | 0.5277 | INHERITED FROM: vascular system || portion of vascular tissue |
| Calcium ATPase, transduction domain A | 0.5293 | INHERITED FROM: portion of ground tissue || ground tissue cell || parenchyma cell || mesophyll cell |
| Calcium ATPase, transmembrane domain M | 0.5515 | INHERITED FROM: portion of ground tissue || ground tissue cell || parenchyma cell || mesophyll cell |
| ABC transporter transmembrane region | 0.5532 | INHERITED FROM: portion of ground tissue || vascular bundle |
| Nucleosome core histones | 0.5748 | INHERITED FROM: root primordium || shoot apical meristem || shoot meristem || primordium || root apical meristem || lateral root apical meristem || apical meristem || root meristem || lateral root primordium || flower meristem || reproductive shoot apical meristem |
| Exocyst complex component | 0.5804 | INHERITED FROM: portion of ground tissue || root primordium || root hair cell || primordium || lateral root cap || root cortex || root epidermal cell || endodermis || root vascular system || root epidermis || root parenchyma || portion of secretory tissue || root meristem || lateral root primordium || root endodermis |
| Meta-cation ATPase, catalytic domain P | 0.6041 | INHERITED FROM: portion of ground tissue || ground tissue cell || parenchyma cell || mesophyll cell |
| Chalcone synthase-like | 0.6107 | INHERITED FROM: leaf epidermis || shoot apical meristem || shoot meristem || phyllome trichome || trichome || phyllome epidermis || leaf trichome |
| Inositol polyphosphate 5-phosphatase (IPP5) | 0.6549 | INHERITED FROM: root hair cell || root epidermal cell || root epidermis || trichoblast |
| Glycosyl hydrolases family 16 | 0.6579 | INHERITED FROM: root epidermal cell || root epidermis |
| ABC transporter ATPase domain-like | 0.8154 | INHERITED FROM: portion of ground tissue || root parenchyma |
| Homeodomain | 0.82 | INHERITED FROM: portion of ground tissue || integument || phyllome primordium || shoot apical meristem || shoot meristem || primordium || apical meristem || trichome || vascular system || portion of vascular tissue || root cortex || endosperm || flower meristem |
| Polygalacturonase inhibiting protein PGIP | 0.9258 | INHERITED FROM: cambium || lateral meristem |
| Aquaporin-like | 0.957 | INHERITED FROM: portion of ground tissue || portion of vascular tissue || root cortex || root epidermis |
| Myb/SANT domain | 1 | INHERITED FROM: xylem || vascular system || portion of vascular tissue || protoxylem || microsporangium tapetum || anther wall tapetum || leaf trichome |
| B3 DNA binding domain | 1 | INHERITED FROM: primordium || ovary placenta || placenta || ovule primordium |
| SRF-like | 1 | INHERITED FROM: integument || root cap || apical meristem || parenchyma || root parenchyma || endosperm |
| NAC domain | 1 | INHERITED FROM: portion of ground tissue || xylem || shoot system vascular system || vascular system || portion of vascular tissue || procambium || root parenchyma |
| Plant lipid-transfer and hydrophobic proteins | 1 | INHERITED FROM: root primordium || primordium || cotyledon vascular system || lateral root primordium |
| BTB/POZ domain | 1 | INHERITED FROM: embryo vascular system || seed coat |
| Skp1 dimerisation domain-like | 1 | INHERITED FROM: seed coat |
| Subtilases | 1 | INHERITED FROM: shoot system vascular system || phyllome vascular system || leaf vascular system || vascular system |
| beta-glycanases | 1 | INHERITED FROM: endosperm || micropylar endosperm |
| Galacturonase | 1 | INHERITED FROM: abscission zone |
| Cytochrome P450 | 1 | INHERITED FROM: pericarp |
| PR-1-like | 1 | INHERITED FROM: root epidermal cell || root epidermis |
| UDPGT-like | 1 | INHERITED FROM: root primordium || phyllome primordium || primordium || vascular leaf primordium || lateral root primordium |
| CCP-like | 1 | INHERITED FROM: root hair cell || trichoblast |
| Multidomain cupredoxins | 1 | INHERITED FROM: leaf epidermis || shoot system vascular system || epidermal pavement cell || phyllome trichome || phyllome vascular system || leaf vascular system || trichome || papilla cell || vascular system || sepal vascular system || flower vascular system || cotyledon vascular system || petal vascular system || phyllome epidermis || leaf trichome |
| Penicillin synthase-like | 1 | INHERITED FROM: integument || flower vascular system || outer integument |
| SCOP term |
FDR (all) |
Annotation (direct or inherited) |
| Proteasome subunits | 0 | Direct |
| GroEL-like chaperone, apical domain | 0 | Direct |
| DNA repair glycosylase, 2 C-terminal domains | 0 | Direct |
| Cytochrome c oxidase Subunit F | 0 | Direct |
| Galectin (animal S-lectin) | 0 | Direct |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| FF domain | 0 | Direct |
| IF2B-like | 0 | Direct |
| EF-G/eEF-2 domains III and V | 0 | Direct |
| Leucine aminopeptidase, C-terminal domain | 0 | Direct |
| Clathrin coat assembly domain | 0 | Direct |
| GAPDH-like | 0 | Direct |
| Class I aminoacyl-tRNA synthetases (RS), catalytic domain | 0 | Direct |
| Pseudouridine synthase II TruB | 0 | Direct |
| Heme-dependent catalases | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
| Plant lipoxigenases | 0 | Direct |
| Tubulin, GTPase domain | 0 | Direct |
| Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain | 0 | Direct |
| Lipoxigenase N-terminal domain | 0 | Direct |
| Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0 | Direct |
| DNase I-like | 0 | Direct |
| Carbon-carbon bond hydrolase | 0 | Direct |
| Bacterial PLC | 0 | Direct |
| Glycerol-3-phosphate dehydrogenase | 0 | Direct |
| Aminoacid dehydrogenases | 0 | Direct |
| NADPH-cytochrome p450 reductase-like | 0 | Direct |
| EB1 dimerisation domain-like | 0 | Direct |
| Cryptochrome/photolyase, N-terminal domain | 0 | Direct |
| DNA polymerase III clamp loader subunits, C-terminal domain | 0 | Direct |
| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC | 0 | Direct |
| gamma-carbonic anhydrase-like | 0 | Direct |
| Macro domain | 0 | Direct |
| SH2 domain | 0 | Direct |
| VC0467-like | 0 | Direct |
| Hypoxia-inducible factor HIF ihhibitor (FIH1) | 0 | Direct |
| Aminomethyltransferase folate-binding domain | 0 | Direct |
| Sigma4 domain | 0 | Direct |
| NAD kinase-like | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain | 0 | Direct |
| LeuD-like | 0 | Direct |
| Prolyl oligopeptidase, N-terminal domain | 0 | Direct |
| Allosteric chorismate mutase | 0 | Direct |
| Tim10/DDP | 0 | Direct |
| G domain-linked domain | 0 | Direct |
| Crambin-like | 0 | Direct |
| T7 RNA polymerase | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | Direct |
| Poly A polymerase C-terminal region-like | 0 | Direct |
| N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 | 0 | Direct |
| Trunk domain of Sec23/24 | 0 | Direct |
| RWD domain | 0 | Direct |
| CoA-binding domain | 0 | Direct |
| PAPS reductase-like | 0 | Direct |
| Formyltransferase | 0 | Direct |
| (Glycosyl)asparaginase | 0 | Direct |
| RuBisCo LSMT catalytic domain | 0 | Direct |
| Translation initiation factor IF3, N-terminal domain | 0 | Direct |
| Spermidine synthase | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| HMGL-like | 0 | Direct |
| MPP-like | 0 | Direct |
| DNA topoisomerase IV, alpha subunit | 0 | Direct |
| Phoshoinositide 3-kinase (PI3K), catalytic domain | 0 | Direct |
| Hermes transposase-like | 0 | Direct |
| SpoU-like RNA 2'-O ribose methyltransferase | 0 | Direct |
| UEV domain | 0 | Direct |
| HIT (HINT, histidine triad) family of protein kinase-interacting proteins | 0 | Direct |
| Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
| RNA polymerase II subunit RBP4 (RpoF) | 0 | Direct |
| Cytokinin dehydrogenase 1 | 0 | Direct |
| P1 nuclease | 0 | Direct |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| Homoserine dehydrogenase-like | 0 | Direct |
| Protein prenylyltransferase | 0 | Direct |
| Group II chaperonin (CCT, TRIC), intermediate domain | 0 | Direct |
| HAT/Suf repeat | 0 | Direct |
| WW domain | 0 | Direct |
| UDP-glucose pyrophosphorylase | 0 | Direct |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB | 0 | Direct |
| Cold shock DNA-binding domain-like | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Reductases | 0 | Direct |
| E2F dimerization segment | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | 0 | Direct |
| Group II chaperonin (CCT, TRIC), apical domain | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| PWWP domain | 0 | Direct |
| Serine acetyltransferase | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| Rps19E-like | 0 | Direct |
| beta-Phosphoglucomutase-like | 0 | Direct |
| HspBP1 domain | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| ZZ domain | 0 | Direct |
| Tetramerization domain of potassium channels | 0 | Direct |
| Methionine aminopeptidase, insert domain | 0 | Direct |
| RuBisCO, small subunit | 0 | Direct |
| HCP-like | 0 | Direct |
| UBA domain | 0 | Direct |
| Peptidyl-tRNA hydrolase II | 0 | Direct |
| XPF/Rad1/Mus81 nuclease | 0 | Direct |
| Nitrogenase iron protein-like | 0 | Direct |
| Formate/glycerate dehydrogenases, NAD-domain | 0 | Direct |
| 28-residue LRR | 0 | Direct |
| Transcription factor IIA (TFIIA), alpha-helical domain | 0 | Direct |
| GABARAP-like | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Poly A polymerase head domain-like | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| PyrH-like | 0 | Direct |
| Transcriptional coactivator PC4 C-terminal domain | 0 | Direct |
| Thymidylate synthase/dCMP hydroxymethylase | 0 | Direct |
| Mitochondrial glycoprotein MAM33-like | 0 | Direct |
| Hypothetical protein TM0160 | 0 | Direct |
| RNA polymerase alpha subunit dimerisation domain | 0 | Direct |
| PDI-like | 0 | Direct |
| Band 7/SPFH domain | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain | 0 | Direct |
| Nucleoside hydrolase | 0 | Direct |
| glucose-1-phosphate thymidylyltransferase | 0 | Direct |
| HesB-like domain | 0 | Direct |
| 3-Methyladenine DNA glycosylase I (Tag) | 0 | Direct |
| Swaposin | 0 | Direct |
| 5' to 3' exonuclease catalytic domain | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), catalytic domain | 0 | Direct |
| GAF domain | 0 | Direct |
| Ferredoxin domains from multidomain proteins | 0 | Direct |
| PaaI/YdiI-like | 0 | Direct |
| Branched-chain alpha-keto acid dehydrogenase Pyr module | 0 | Direct |
| L23p | 0 | Direct |
| Threonyl-tRNA synthetase (ThrRS), second 'additional' domain | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| BCR-homology GTPase activation domain (BH-domain) | 0 | Direct |
| Anticodon-binding domain of Class II aaRS | 0 | Direct |
| MioX-like | 0 | Direct |
| Tryptophan biosynthesis enzymes | 0 | Direct |
| Ribosomal proteins L24p and L21e | 0 | Direct |
| Gtf glycosyltransferase | 0 | Direct |
| Starch-binding domain | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| Ferritin | 0 | Direct |
| Myf domain | 0 | Direct |
| FAH | 0 | Direct |
| Sm motif of small nuclear ribonucleoproteins, SNRNP | 0 | Direct |
| S-adenosylmethionine decarboxylase | 0 | Direct |
| VPS23 C-terminal domain | 0 | Direct |
| Plant stress-induced protein | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| Ribosomal protein S13 | 0 | Direct |
| Heat shock protein 90, HSP90, N-terminal domain | 0 | Direct |
| AlkB-like | 0 | Direct |
| Ribosomal protein L18 and S11 | 0 | Direct |
| Penta-EF-hand proteins | 0 | Direct |
| Hypothetical protein HI1317 | 0 | Direct |
| Ubiquitin carboxyl-terminal hydrolase UCH-L | 0 | Direct |
| Prokaryotic type KH domain (KH-domain type II) | 0 | Direct |
| Type 1 signal peptidase | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| Release factor | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| rRNA adenine dimethylase-like | 0 | Direct |
| SH3-domain | 0 | Direct |
| LysM domain | 0 | Direct |
| Tudor domain | 0 | Direct |
| Glucose 6-phosphate dehydrogenase-like | 0 | Direct |
| beta-CASP RNA-metabolising hydrolases | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| SWIRM domain | 0 | Direct |
| Initiation factor IF2/eIF5b, domain 3 | 0 | Direct |
| NOL1/NOP2/sun | 0 | Direct |
| Eukaryotic DNA topoisomerase I, catalytic core | 0 | Direct |
| Subtilase propeptides/inhibitors | 0 | Direct |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
| DEK C-terminal domain | 0 | Direct |
| Retrovirus zinc finger-like domains | 0 | Direct |
| RNA-polymerase beta-prime | 0 | Direct |
| Chalcone isomerase | 0 | Direct |
| R3H domain | 0 | Direct |
| Cytidylyltransferase | 0 | Direct |
| HEAT repeat | 0 | Direct |
| Succinyl-CoA synthetase, beta-chain, N-terminal domain | 0 | Direct |
| RraA-like | 0 | Direct |
| Homocysteine S-methyltransferase | 0 | Direct |
| Ribonuclease H | 0 | Direct |
| Flavin-binding PAS domain | 0 | Direct |
| Glycerol-3-phosphate transporter | 0 | Direct |
| HSP90 C-terminal domain | 0 | Direct |
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain | 0 | Direct |
| C-terminal domain of ribosomal protein L2 | 0 | Direct |
| Chromo barrel domain | 0 | Direct |
| B56-like | 0 | Direct |
| Ribosomal S5 protein, N-terminal domain | 0 | Direct |
| Enolase N-terminal domain-like | 0 | Direct |
| NAP-like | 0 | Direct |
| Ribosomal protein S27e | 0 | Direct |
| PsbO-like | 0 | Direct |
| Ribosomal protein L10e | 0 | Direct |
| Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| Anticodon-binding domain | 0 | Direct |
| ValRS/IleRS/LeuRS editing domain | 0 | Direct |
| BAR domain | 0 | Direct |
| RibA-like | 0 | Direct |
| Internalin LRR domain | 0 | Direct |
| DNA polymerase processivity factor | 0 | Direct |
| Ypt/Rab-GAP domain of gyp1p | 0 | Direct |
| NagD-like | 0 | Direct |
| Amine oxidase catalytic domain | 0 | Direct |
| Amylase, catalytic domain | 0 | Direct |
| Chlorophyll a-b binding protein | 0 | Direct |
| Arginine methyltransferase | 0 | Direct |
| Arp2/3 complex subunits | 0 | Direct |
| RecA protein, C-terminal domain | 0 | Direct |
| Cystatins | 0 | Direct |
| Double Clp-N motif | 0 | Direct |
| BolA-like | 0 | Direct |
| Ribosomal protein S15 | 0 | Direct |
| RNase III catalytic domain-like | 0 | Direct |
| Diacylglycerol kinase-like | 0 | Direct |
| LON domain-like | 0 | Direct |
| Rubredoxin | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| COMT-like | 0 | Direct |
| Clathrin adaptor appendage, alpha and beta chain-specific domain | 0 | Direct |
| Prefoldin | 0 | Direct |
| ATP sulfurylase N-terminal domain | 0 | Direct |
| RIO1-like kinases | 0 | Direct |
| SAM (sterile alpha motif) domain | 0 | Direct |
| MIF-related | 0 | Direct |
| Ran-binding domain | 0 | Direct |
| DNA repair protein MutS, domain I | 0 | Direct |
| L-aspartase/fumarase | 0 | Direct |
| Creatinase/aminopeptidase | 0 | Direct |
| Mitochondrial carrier | 0 | Direct |
| Ribonucleotide reductase-like | 0 | Direct |
| Class-II DAHP synthetase | 0 | Direct |
| Heat shock protein 70kD (HSP70), peptide-binding domain | 0 | Direct |
| beta-N-acetylhexosaminidase catalytic domain | 0 | Direct |
| Peptidyl-tRNA hydrolase-like | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| Smr domain | 0 | Direct |
| Eps15 homology domain (EH domain) | 0 | Direct |
| SerA intervening domain-like | 0 | Direct |
| Clc chloride channel | 0 | Direct |
| Ring hydroxylating alpha subunit ISP domain | 0 | Direct |
| Ribosomal protein L5 | 0 | Direct |
| Hypothetical protein TM1112 | 0 | Direct |
| Receiver domain of the ethylene receptor | 0 | Direct |
| Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| 4HBT-like | 0 | Direct |
| DNA gyrase/MutL, second domain | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| Clp protease, ClpP subunit | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| Cobalamin-independent methionine synthase | 0 | Direct |
| UBX domain | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | Direct |
| Aspartokinase allosteric domain-like | 0 | Direct |
| BAG domain | 0 | Direct |
| ECR1 N-terminal domain-like | 0 | Direct |
| EXOSC10 HRDC domain-like | 0 | Direct |
| RNA methyltransferase FtsJ | 0 | Direct |
| Choline kinase | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| Sec1/munc18-like (SM) proteins | 0 | Direct |
| RNB domain-like | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| 5' nucleotidase-like | 0 | Direct |
| 6-phosphogluconate dehydrogenase-like, N-terminal domain | 0 | Direct |
| Gelsolin-like | 0 | Direct |
| Dihydrofolate reductases | 0 | Direct |
| Amine oxidase N-terminal region | 0 | Direct |
| Branched-chain alpha-keto acid dehydrogenase PP module | 0 | Direct |
| Linker histone H1/H5 | 0 | Direct |
| MYND zinc finger | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| Cell cycle transcription factor e2f-dp | 0 | Direct |
| Formate/glycerate dehydrogenases, substrate-binding domain | 0 | Direct |
| Acyl-ACP thioesterase-like | 0 | Direct |
| HD domain | 0 | Direct |
| Lactate & malate dehydrogenases, C-terminal domain | 0 | Direct |
| alpha-Amylases, C-terminal beta-sheet domain | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| Ribosomal protein S10 | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| Pirin-like | 0 | Direct |
| Ran binding protein zinc finger-like | 0 | Direct |
| Dihydrodipicolinate reductase-like | 0 | Direct |
| Ribosomal protein S27a | 0 | Direct |
| DJ-1/PfpI | 0 | Direct |
| GAT domain | 0 | Direct |
| Neurolysin-like | 0 | Direct |
| Pseudouridine synthase I TruA | 0 | Direct |
| Lesion bypass DNA polymerase (Y-family), catalytic domain | 0 | Direct |
| Enolase | 0 | Direct |
| Elongation factor TFIIS domain 2 | 0 | Direct |
| LplA-like | 0 | Direct |
| NadC N-terminal domain-like | 0 | Direct |
| RNase Z-like | 0 | Direct |
| PX domain | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | Direct |
| Adenosine-5'phosphosulfate kinase (APS kinase) | 0 | Direct |
| FMN-linked oxidoreductases | 0 | Direct |
| Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain | 0 | Direct |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
| AMPK-beta glycogen binding domain-like | 0 | Direct |
| Phosphorelay protein-like | 0 | Direct |
| SAP domain | 0 | Direct |
| Inorganic pyrophosphatase | 0 | Direct |
| Tail specific protease, catalytic domain | 0 | Direct |
| Rieske iron-sulfur protein (ISP) | 0 | Direct |
| NifU C-terminal domain-like | 0 | Direct |
| Glyoxalase I (lactoylglutathione lyase) | 0 | Direct |
| Folylpolyglutamate synthetase | 0 | Direct |
| Sec63 C-terminal domain-like | 0 | Direct |
| RelA/SpoT domain | 0 | Direct |
| eEF-1beta-like | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| GroES | 0 | Direct |
| PsbP-like | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| Deoxycytidylate deaminase-like | 0 | Direct |
| Class I alpha-1;2-mannosidase, catalytic domain | 0 | Direct |
| FtsH protease domain-like | 0 | Direct |
| Smc hinge domain | 0 | Direct |
| Ribosomal protein L22 | 0 | Direct |
| PNP-oxidase like | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| Cdc48 N-terminal domain-like | 0 | Direct |
| monodomain cytochrome c | 0 | Direct |
| VHP, Villin headpiece domain | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| GroEL-like chaperone, intermediate domain | 0 | Direct |
| Ribosomal proteins L15p and L18e | 0 | Direct |
| Outer arm dynein light chain 1 | 0 | Direct |
| Ribosomal protein L19 | 0 | Direct |
| LEA14-like | 0 | Direct |
| Group II chaperonin (CCT, TRIC), ATPase domain | 0 | Direct |
| Gastric lipase | 0 | Direct |
| Leucine aminopeptidase (Aminopeptidase A), N-terminal domain | 0 | Direct |
| Staphylococcal nuclease | 0 | Direct |
| Ribosomal protein L35ae | 0 | Direct |
| Cytochrome b5 | 0 | Direct |
| AF1104-like | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| Rps17e-like | 0 | Direct |
| Cytochrome p450 reductase N-terminal domain-like | 0 | Direct |
| Alpha-adaptin ear subdomain-like | 0 | Direct |
| Hsp90 middle domain | 0 | Direct |
| Inositol monophosphatase/fructose-1,6-bisphosphatase-like | 0 | Direct |
| N-type ATP pyrophosphatases | 0 | Direct |
| IPP isomerase-like | 0 | Direct |
| PUG domain | 0 | Direct |
| BSD domain | 0 | Direct |
| Prolyl oligopeptidase, C-terminal domain | 0 | Direct |
| beta-carbonic anhydrase, cab | 0 | Direct |
| Thioredoxin-like 2Fe-2S ferredoxin | 0 | Direct |
| Thiolase-related | 0 | Direct |
| Zf-UBP | 0 | Direct |
| TAZ domain | 0 | Direct |
| Shikimate kinase (AroK) | 0 | Direct |
| F1F0 ATP synthase subunit C | 0 | Direct |
| GlmU C-terminal domain-like | 0 | Direct |
| Signal peptide-binding domain | 0 | Direct |
| Gamma-glutamyl cyclotransferase-like | 0 | Direct |
| Ribosomal protein L1 | 0 | Direct |
| D-ribulose-5-phosphate 3-epimerase | 0 | Direct |
| ALDH-like | 0 | Direct |
| Eukaryotic type heme oxygenase | 0 | Direct |
| PA domain | 0 | Direct |
| Translation initiation factor IF3, C-terminal domain | 0 | Direct |
| Plus3 | 0 | Direct |
| Alanine racemase-like, N-terminal domain | 0 | Direct |
| Tropomyosin | 0 | Direct |
| NadC C-terminal domain-like | 0 | Direct |
| Nucleoside diphosphate kinase, NDK | 0 | Direct |
| Cytochrome c oxidase subunit h | 0 | Direct |
| SelR domain | 0 | Direct |
| 2Fe-2S ferredoxin-related | 0 | Direct |
| Sedlin (SEDL) | 0 | Direct |
| Ammonium transporter | 0 | Direct |
| Chromo domain | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| PdxS-like | 0 | Direct |
| Ribosomal protein L3 | 0 | Direct |
| VHS domain | 0 | Direct |
| Pseudouridine synthase RsuA/RluD | 0 | Direct |
| Plant transcriptional regulator PBF-2 | 0 | Direct |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| Translation initiation factor eIF4e | 0 | Direct |
| Bacterial exopeptidase dimerisation domain | 0 | Direct |
| DNA replication initiator (cdc21/cdc54) N-terminal domain | 0 | Direct |
| Poly(ADP-ribose) polymerase, C-terminal domain | 0 | Direct |
| Phosphofructokinase | 0 | Direct |
| NHL repeat | 0 | Direct |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| CAT-like | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| Ribosomal protein L6 | 0 | Direct |
| Epoxide hydrolase | 0 | Direct |
| Class I aldolase | 0 | Direct |
| Ribonuclease PH domain 2-like | 0 | Direct |
| Molybdenum-containing oxidoreductases-like dimerisation domain | 0 | Direct |
| FucT-like | 0 | Direct |
| Calnexin/calreticulin | 0 | Direct |
| 1,3-glucuronyltransferase | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase dimerisation domain | 0 | Direct |
| Phosphoribosylpyrophosphate synthetase-like | 0 | Direct |
| MutT-like | 0 | Direct |
| WrbA-like | 0 | Direct |
| Clathrin adaptor core protein | 0 | Direct |
| GDI-like N domain | 0 | Direct |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
| GroEL chaperone, ATPase domain | 0 | Direct |
| Hypothetical protein At2g34160 | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| Transcription factor IIA (TFIIA), beta-barrel domain | 0 | Direct |
| Type II DNA topoisomerase | 0 | Direct |
| BphP N-terminal domain-like | 0 | Direct |
| BC ATP-binding domain-like | 0 | Direct |
| NLI interacting factor-like phosphatase | 0 | Direct |
| Heat shock protein 70kD (HSP70), C-terminal subdomain | 0 | Direct |
| Ribosomal protein S3 C-terminal domain | 0 | Direct |
| eIF1-like | 0 | Direct |
| PB1 domain | 0 | Direct |
| Biotinyl/lipoyl-carrier proteins and domains | 0 | Direct |
| Translational machinery components | 0 | Direct |
| DnaJ/Hsp40 cysteine-rich domain | 0 | Direct |
| Tubulin, C-terminal domain | 0 | Direct |
| SOUL heme-binding protein | 0 | Direct |
| PhzC/PhzF-like | 0 | Direct |
| Methyl-CpG-binding domain, MBD | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| ATP sulfurylase catalytic domain | 0 | Direct |
| Cell cycle arrest protein BUB3 | 0 | Direct |
| PUA domain | 0 | Direct |
| PCI domain (PINT motif) | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| BC N-terminal domain-like | 0 | Direct |
| N-acetyl-l-glutamate kinase | 0 | Direct |
| HAL/PAL-like | 0 | Direct |
| Phytochrome-specific domain | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| Biotin dependent carboxylase carboxyltransferase domain | 0 | Direct |
| Ribosomal protein L37e | 0 | Direct |
| EDF1-like | 0 | Direct |
| Nucleotide and nucleoside kinases | 0 | Direct |
| YhbY-like | 0 | Direct |
| SufE-like | 0 | Direct |
| RplX-like | 0 | Direct |
| Allene oxide cyclase-like | 0 | Direct |
| Insert subdomain of RNA polymerase alpha subunit | 0 | Direct |
| Ribonuclease PH domain 1-like | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| Tetrahydrofolate dehydrogenase/cyclohydrolase | 0 | Direct |
| Glyoxalase II (hydroxyacylglutathione hydrolase) | 0 | Direct |
| TRM1-like | 0 | Direct |
| Pentapeptide repeats | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| Ribosomal L27 protein | 0 | Direct |
| FKBP immunophilin/proline isomerase | 0 | Direct |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| BC C-terminal domain-like | 0 | Direct |
| Ubiquitin activating enzymes (UBA) | 0 | Direct |
| beta-sandwich domain of Sec23/24 | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| Oxygen-evolving enhancer protein 3, | 0 | Direct |
| Hect, E3 ligase catalytic domain | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| Molybdenum cofactor biosynthesis protein MoeB | 0 | Direct |
| Met-10+ protein-like | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| NADPH-cytochrome p450 reductase FAD-binding domain-like | 0 | Direct |
| eIF5a N-terminal domain-like | 0 | Direct |
| Leukotriene A4 hydrolase catalytic domain | 0 | Direct |
| LDH N-terminal domain-like | 0 | Direct |
| Protein prenyltransferases | 0 | Direct |
| RNA-polymerase beta | 0 | Direct |
| Sec63 N-terminal domain | 0 | Direct |
| YicI N-terminal domain-like | 0 | Direct |
| Canonical RBD | 0.00001135 | Direct |
| Chaperone J-domain | 0.0002842 | Direct |
| WD40-repeat | 0.0008623 | Direct |
| GARP response regulators | 0.005973 | Inherited |
| G proteins | 0.01515 | Inherited |
| Actin/HSP70 | 0.02723 | Inherited |
| Glycosyl transferases group 1 | 0.08214 | Inherited |
| Cyclin | 0.09612 | Inherited |
| RING finger domain, C3HC4 | 0.1583 | Inherited |
| Galactosyltransferase LgtC | 0.1833 | Inherited |
| Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta | 0.2809 | Inherited |
| U-box | 0.2932 | Inherited |
| GCC-box binding domain | 0.3249 | Inherited |
| HLH, helix-loop-helix DNA-binding domain | 0.3249 | Inherited |
| Trehalose-phosphatase | 0.344 | Inherited |
| Glutathione S-transferase (GST), C-terminal domain | 0.3637 | Inherited |
| Leucine zipper domain | 0.3926 | Inherited |
| Glutathione S-transferase (GST), N-terminal domain | 0.4026 | Inherited |
| PHD domain | 0.4688 | Inherited |
| CheY-related | 0.4747 | Inherited |
| Alcohol dehydrogenase-like, C-terminal domain | 0.503 | Inherited |
| Trehalose-6-phosphate synthase, OtsA | 0.5108 | Inherited |
| Alcohol dehydrogenase-like, N-terminal domain | 0.5277 | Inherited |
| Calcium ATPase, transduction domain A | 0.5293 | Inherited |
| Calcium ATPase, transmembrane domain M | 0.5515 | Inherited |
| ABC transporter transmembrane region | 0.5532 | Inherited |
| Nucleosome core histones | 0.5748 | Inherited |
| Exocyst complex component | 0.5804 | Inherited |
| Meta-cation ATPase, catalytic domain P | 0.6041 | Inherited |
| Chalcone synthase-like | 0.6107 | Inherited |
| Inositol polyphosphate 5-phosphatase (IPP5) | 0.6549 | Inherited |
| Glycosyl hydrolases family 16 | 0.6579 | Inherited |
| ABC transporter ATPase domain-like | 0.8154 | Inherited |
| Homeodomain | 0.82 | Inherited |
| Polygalacturonase inhibiting protein PGIP | 0.9258 | Inherited |
| Aquaporin-like | 0.957 | Inherited |
| Myb/SANT domain | 1 | Inherited |
| B3 DNA binding domain | 1 | Inherited |
| SRF-like | 1 | Inherited |
| NAC domain | 1 | Inherited |
| Plant lipid-transfer and hydrophobic proteins | 1 | Inherited |
| BTB/POZ domain | 1 | Inherited |
| Skp1 dimerisation domain-like | 1 | Inherited |
| Subtilases | 1 | Inherited |
| beta-glycanases | 1 | Inherited |
| Galacturonase | 1 | Inherited |
| Cytochrome P450 | 1 | Inherited |
| PR-1-like | 1 | Inherited |
| UDPGT-like | 1 | Inherited |
| CCP-like | 1 | Inherited |
| Multidomain cupredoxins | 1 | Inherited |
| Penicillin synthase-like | 1 | Inherited |
LINKTO: Domain2BO Download and Domain2BO Algorithm
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Supra-domain (Single)( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| LysM domain | 0 | DIRECT |
| Chlorophyll a-b binding protein | 0 | DIRECT |
| RuBisCO, small subunit | 0 | DIRECT |
| Diaminopimelate epimerase-like | 0 | DIRECT |
| Electron transport accessory proteins | 0 | DIRECT |
| Ribosomal L27 protein-like | 0 | DIRECT |
| Signal peptide-binding domain | 0 | DIRECT |
| LuxS/MPP-like metallohydrolase | 0 | DIRECT |
| RNase III domain-like | 0 | DIRECT |
| Translation initiation factor IF3, C-terminal domain | 0 | DIRECT |
| HSP90 C-terminal domain | 0 | DIRECT |
| Zn-binding ribosomal proteins | 0 | DIRECT |
| L9 N-domain-like | 0 | DIRECT |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
| Oxygen-evolving enhancer protein 3, | 0 | DIRECT |
| Thioesterase/thiol ester dehydrase-isomerase | 0 | DIRECT |
| post-AAA+ oligomerization domain-like | 0 | DIRECT |
| GAF domain-like | 0 | DIRECT |
| ACT-like | 0 | DIRECT |
| Peptidyl-tRNA hydrolase-like | 0 | DIRECT |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
| ALDH-like | 0 | DIRECT |
| Glutathione synthetase ATP-binding domain-like | 0 | DIRECT |
| Ribosomal protein L39e | 0 | DIRECT |
| Ribosomal protein S6 | 0 | DIRECT |
| HRDC-like | 0 | DIRECT |
| SH2 domain | 0 | DIRECT |
| Heme oxygenase-like | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | DIRECT |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | DIRECT |
| SIS domain | 0 | DIRECT |
| lambda repressor-like DNA-binding domains | 0 | DIRECT |
| JAB1/MPN domain | 0 | DIRECT |
| Carbohydrate phosphatase | 0 | DIRECT |
| Elongation factor TFIIS domain 2 | 0 | DIRECT |
| Phosphoglycerate kinase | 0 | DIRECT |
| RraA-like | 0 | DIRECT |
| Metallo-hydrolase/oxidoreductase | 0 | DIRECT |
| Restriction endonuclease-like | 0 | DIRECT |
| Ribosomal protein S2 | 0 | DIRECT |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | DIRECT |
| E2F-DP heterodimerization region | 0 | DIRECT |
| Dihydrofolate reductase-like | 0 | DIRECT |
| RecA protein, C-terminal domain | 0 | DIRECT |
| Ribosomal protein L22 | 0 | DIRECT |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
| beta-carbonic anhydrase, cab | 0 | DIRECT |
| FAD-linked oxidoreductase | 0 | DIRECT |
| Formate/glycerate dehydrogenase catalytic domain-like | 0 | DIRECT |
| FAD-dependent thiol oxidase | 0 | DIRECT |
| Heat shock protein 70kD (HSP70), C-terminal subdomain | 0 | DIRECT |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | DIRECT |
| PreATP-grasp domain | 0 | DIRECT |
| Type II DNA topoisomerase | 0 | DIRECT |
| EGF/Laminin | 0 | DIRECT |
| Inorganic pyrophosphatase | 0 | DIRECT |
| PX domain | 0 | DIRECT |
| TAZ domain | 0 | DIRECT |
| Prokaryotic type KH domain (KH-domain type II) | 0 | DIRECT |
| Endosomal sorting complex assembly domain | 0 | DIRECT |
| PLP-binding barrel | 0 | DIRECT |
| SAP domain | 0 | DIRECT |
| Thymidylate synthase/dCMP hydroxymethylase | 0 | DIRECT |
| HD-domain/PDEase-like | 0 | DIRECT |
| Ribosomal protein L10-like | 0 | DIRECT |
| eEF-1beta-like | 0 | DIRECT |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | DIRECT |
| BolA-like | 0 | DIRECT |
| MoaD/ThiS | 0 | DIRECT |
| CYTH-like phosphatases | 0 | DIRECT |
| Trm112p-like | 0 | DIRECT |
| LEA14-like | 0 | DIRECT |
| Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
| Translation initiation factor IF3, N-terminal domain | 0 | DIRECT |
| Nucleoside diphosphate kinase, NDK | 0 | DIRECT |
| Phosphoglucomutase, first 3 domains | 0 | DIRECT |
| Prefoldin | 0 | DIRECT |
| Prokaryotic type I DNA topoisomerase | 0 | DIRECT |
| Outer arm dynein light chain 1 | 0 | DIRECT |
| ITPase-like | 0 | DIRECT |
| R3H domain | 0 | DIRECT |
| Ribonuclease PH domain 2-like | 0 | DIRECT |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
| S13-like H2TH domain | 0 | DIRECT |
| P-domain of calnexin/calreticulin | 0 | DIRECT |
| BAR/IMD domain-like | 0 | DIRECT |
| Caspase-like | 0 | DIRECT |
| LigT-like | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | 0 | DIRECT |
| Band 7/SPFH domain | 0 | DIRECT |
| Insert subdomain of RNA polymerase alpha subunit | 0 | DIRECT |
| UROD/MetE-like | 0 | DIRECT |
| AlbA-like | 0 | DIRECT |
| Tudor/PWWP/MBT | 0 | DIRECT |
| DNA breaking-rejoining enzymes | 0 | DIRECT |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | DIRECT |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | DIRECT |
| Ribulose-phoshate binding barrel | 0 | DIRECT |
| GlnB-like | 0 | DIRECT |
| Rps17e-like | 0 | DIRECT |
| Heme-dependent catalase-like | 0 | DIRECT |
| Sigma2 domain of RNA polymerase sigma factors | 0 | DIRECT |
| Amine oxidase N-terminal region | 0 | DIRECT |
| XPC-binding domain | 0 | DIRECT |
| VC0467-like | 0 | DIRECT |
| Serine metabolism enzymes domain | 0 | DIRECT |
| MurD-like peptide ligases, peptide-binding domain | 0 | DIRECT |
| Domain of the SRP/SRP receptor G-proteins | 0 | DIRECT |
| Smc hinge domain | 0 | DIRECT |
| HIT-like | 0 | DIRECT |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | DIRECT |
| LeuD/IlvD-like | 0 | DIRECT |
| Creatinase/prolidase N-terminal domain | 0 | DIRECT |
| AF1104-like | 0 | DIRECT |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
| SMR domain-like | 0 | DIRECT |
| YrdC/RibB | 0 | DIRECT |
| Ribosomal L11/L12e N-terminal domain | 0 | DIRECT |
| Carbamate kinase-like | 0 | DIRECT |
| GINS helical bundle-like | 0 | DIRECT |
| GroEL apical domain-like | 0 | DIRECT |
| TGS-like | 0 | DIRECT |
| Ribosomal protein L16p/L10e | 0 | DIRECT |
| DNA repair protein MutS, domain II | 0 | DIRECT |
| PriA/YqbF domain | 0 | DIRECT |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | DIRECT |
| Putative isomerase YbhE | 0 | DIRECT |
| Oxidoreductase molybdopterin-binding domain | 0 | DIRECT |
| F1F0 ATP synthase subunit C | 0 | DIRECT |
| Tetrapyrrole methylase | 0 | DIRECT |
| Ribosomal proteins S24e, L23 and L15e | 0 | DIRECT |
| Metallo-dependent hydrolases | 0 | DIRECT |
| Bacterial exopeptidase dimerisation domain | 0 | DIRECT |
| Mss4-like | 0 | DIRECT |
| Ferritin-like | 0 | DIRECT |
| Arp2/3 complex subunits | 0 | DIRECT |
| Ribosomal protein S3 C-terminal domain | 0 | DIRECT |
| Ran binding protein zinc finger-like | 0 | DIRECT |
| L28p-like | 0 | DIRECT |
| alpha-helical ferredoxin | 0 | DIRECT |
| EB1 dimerisation domain-like | 0 | DIRECT |
| Peptidase/esterase 'gauge' domain | 0 | DIRECT |
| GTPase activation domain, GAP | 0 | DIRECT |
| LDH C-terminal domain-like | 0 | DIRECT |
| OMPA-like | 0 | DIRECT |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | DIRECT |
| Composite domain of metallo-dependent hydrolases | 0 | DIRECT |
| Tautomerase/MIF | 0 | DIRECT |
| Ribosomal protein L6 | 0 | DIRECT |
| Hypothetical protein TM0160 | 0 | DIRECT |
| FMN-binding split barrel | 0 | DIRECT |
| FKBP-like | 0 | DIRECT |
| Seven-hairpin glycosidases | 0 | DIRECT |
| PUG domain-like | 0 | DIRECT |
| Formyltransferase | 0 | DIRECT |
| Rubredoxin-like | 0 | DIRECT |
| Ribosomal protein L13 | 0 | DIRECT |
| HIT/MYND zinc finger-like | 0 | DIRECT |
| Pseudouridine synthase | 0 | DIRECT |
| ADC-like | 0 | DIRECT |
| Aconitase iron-sulfur domain | 0 | DIRECT |
| Ribosomal protein L31e | 0 | DIRECT |
| Flavoproteins | 0 | DIRECT |
| Double Clp-N motif | 0 | DIRECT |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | DIRECT |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | DIRECT |
| alpha/beta knot | 0 | DIRECT |
| Mog1p/PsbP-like | 0 | DIRECT |
| Prokaryotic ribosomal protein L17 | 0 | DIRECT |
| EF-G C-terminal domain-like | 0 | DIRECT |
| S15/NS1 RNA-binding domain | 0 | DIRECT |
| Ribosomal proteins L15p and L18e | 0 | DIRECT |
| DEK C-terminal domain | 0 | DIRECT |
| Glycolipid transfer protein, GLTP | 0 | DIRECT |
| Peptidyl-tRNA hydrolase II | 0 | DIRECT |
| Homocysteine S-methyltransferase | 0 | DIRECT |
| Release factor | 0 | DIRECT |
| S-adenosylmethionine synthetase | 0 | DIRECT |
| Ribosomal protein L4 | 0 | DIRECT |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
| Tubulin C-terminal domain-like | 0 | DIRECT |
| Transcription factor IIA (TFIIA), beta-barrel domain | 0 | DIRECT |
| Protein prenylyltransferase | 0 | DIRECT |
| Saposin | 0 | DIRECT |
| Single hybrid motif | 0 | DIRECT |
| Lipocalins | 0 | DIRECT |
| GroEL-intermediate domain like | 0 | DIRECT |
| Tim10-like | 0 | DIRECT |
| VHP, Villin headpiece domain | 0 | DIRECT |
| DNA repair protein MutS, domain I | 0 | DIRECT |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
| L-aspartase-like | 0 | DIRECT |
| NAP-like | 0 | DIRECT |
| FtsH protease domain-like | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | DIRECT |
| Rudiment single hybrid motif | 0 | DIRECT |
| EPT/RTPC-like | 0 | DIRECT |
| RL5-like | 0 | DIRECT |
| Probable bacterial effector-binding domain | 0 | DIRECT |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | DIRECT |
| Ribosomal protein L19 (L19e) | 0 | DIRECT |
| Ribosomal protein S10 | 0 | DIRECT |
| Succinyl-CoA synthetase domains | 0 | DIRECT |
| Peptide methionine sulfoxide reductase | 0 | DIRECT |
| Cytochrome c | 0 | DIRECT |
| Transcription factor IIA (TFIIA), alpha-helical domain | 0 | DIRECT |
| TATA-box binding protein-like | 0 | DIRECT |
| MOSC N-terminal domain-like | 0 | DIRECT |
| Leukotriene A4 hydrolase N-terminal domain | 0 | DIRECT |
| Pentapeptide repeat-like | 0 | DIRECT |
| Chorismate mutase II | 0 | DIRECT |
| Ribosomal protein L29 (L29p) | 0 | DIRECT |
| Gamma-glutamyl cyclotransferase-like | 0 | DIRECT |
| Creatinase/aminopeptidase | 0 | DIRECT |
| ThrRS/AlaRS common domain | 0 | DIRECT |
| NHL repeat | 0 | DIRECT |
| Clc chloride channel | 0 | DIRECT |
| Lipoxigenase | 0 | DIRECT |
| Cu,Zn superoxide dismutase-like | 0 | DIRECT |
| Macro domain-like | 0 | DIRECT |
| SH3-domain | 0 | DIRECT |
| Nucleoside hydrolase | 0 | DIRECT |
| Chalcone isomerase | 0 | DIRECT |
| eIF1-like | 0 | DIRECT |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| ValRS/IleRS/LeuRS editing domain | 0 | DIRECT |
| Chelatase | 0 | DIRECT |
| Cysteine alpha-hairpin motif | 0 | DIRECT |
| Poly A polymerase C-terminal region-like | 0 | DIRECT |
| Radical SAM enzymes | 0 | DIRECT |
| DNA topoisomerase IV, alpha subunit | 0 | DIRECT |
| Chromo domain-like | 0 | DIRECT |
| Heat shock protein 70kD (HSP70), peptide-binding domain | 0 | DIRECT |
| S-adenosylmethionine decarboxylase | 0 | DIRECT |
| ATP synthase (F1-ATPase), gamma subunit | 0 | DIRECT |
| Clathrin adaptor appendage domain | 0 | DIRECT |
| Sec63 N-terminal domain-like | 0 | DIRECT |
| beta-N-acetylhexosaminidase-like domain | 0 | DIRECT |
| Tricorn protease domain 2 | 0 | DIRECT |
| Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
| Allene oxide cyclase-like | 0 | DIRECT |
| Enolase N-terminal domain-like | 0 | DIRECT |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | DIRECT |
| Helical domain of Sec23/24 | 0 | DIRECT |
| DnaJ/Hsp40 cysteine-rich domain | 0 | DIRECT |
| Class II aaRS ABD-related | 0 | DIRECT |
| FF domain | 0 | DIRECT |
| Zn-finger domain of Sec23/24 | 0 | DIRECT |
| Enolase C-terminal domain-like | 0 | DIRECT |
| Magnesium transport protein CorA, transmembrane region | 0 | DIRECT |
| Actin-crosslinking proteins | 0 | DIRECT |
| Initiation factor IF2/eIF5b, domain 3 | 0 | DIRECT |
| RplX-like | 0 | DIRECT |
| tRNA-binding arm | 0 | DIRECT |
| Tubulin nucleotide-binding domain-like | 0 | DIRECT |
| Crambin-like | 0 | DIRECT |
| Ribosomal protein L14 | 0 | DIRECT |
| Hect, E3 ligase catalytic domain | 0 | DIRECT |
| LexA/Signal peptidase | 0 | DIRECT |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
| Ammonium transporter | 0 | DIRECT |
| Cdc48 domain 2-like | 0 | DIRECT |
| Folate-binding domain | 0 | DIRECT |
| Staphylococcal nuclease | 0 | DIRECT |
| ssDNA-binding transcriptional regulator domain | 0 | DIRECT |
| Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
| Retrovirus zinc finger-like domains | 0 | DIRECT |
| Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0 | DIRECT |
| Acyl-CoA binding protein | 0 | DIRECT |
| RBP11-like subunits of RNA polymerase | 0 | DIRECT |
| Phospholipase C/P1 nuclease | 0 | DIRECT |
| Dimeric alpha+beta barrel | 0 | DIRECT |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | DIRECT |
| RibA-like | 0 | DIRECT |
| BAG domain | 0 | DIRECT |
| DNA clamp | 0 | DIRECT |
| Ribosomal protein L1 | 0 | DIRECT |
| N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 | 0 | DIRECT |
| Mitochondrial glycoprotein MAM33-like | 0 | DIRECT |
| LanC-like | 0 | DIRECT |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | DIRECT |
| ISP domain | 0 | DIRECT |
| Nucleotidylyl transferase | 0 | DIRECT |
| Casein kinase II beta subunit | 0 | DIRECT |
| Tropomyosin | 0 | DIRECT |
| Preprotein translocase SecE subunit | 0 | DIRECT |
| YVTN repeat-like/Quinoprotein amine dehydrogenase | 0 | DIRECT |
| Amine oxidase catalytic domain | 0 | DIRECT |
| FMN-linked oxidoreductases | 0 | DIRECT |
| Class II aaRS and biotin synthetases | 0 | DIRECT |
| Cytochrome c oxidase subunit h | 0 | DIRECT |
| AMPKBI-like | 0 | DIRECT |
| Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
| Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
| Ypt/Rab-GAP domain of gyp1p | 0 | DIRECT |
| beta and beta-prime subunits of DNA dependent RNA-polymerase | 0 | DIRECT |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
| Transducin (alpha subunit), insertion domain | 0 | DIRECT |
| WW domain | 0 | DIRECT |
| Alpha-L RNA-binding motif | 0 | DIRECT |
| Activating enzymes of the ubiquitin-like proteins | 0 | DIRECT |
| SAM/Pointed domain | 0 | DIRECT |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | DIRECT |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
| Phosphofructokinase | 0 | DIRECT |
| beta-sandwich domain of Sec23/24 | 0 | DIRECT |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
| Ribosomal protein L30p/L7e | 0 | DIRECT |
| MurD-like peptide ligases, catalytic domain | 0 | DIRECT |
| Mitochondrial carrier | 0 | DIRECT |
| Carbon-nitrogen hydrolase | 0 | DIRECT |
| YhbY-like | 0 | DIRECT |
| Sec1/munc18-like (SM) proteins | 0 | DIRECT |
| Expressed protein At2g23090/F21P24.15 | 0 | DIRECT |
| 4Fe-4S ferredoxins | 0 | DIRECT |
| Subdomain of clathrin and coatomer appendage domain | 0 | DIRECT |
| Globin-like | 0 | DIRECT |
| Cryptochrome/photolyase, N-terminal domain | 0 | DIRECT |
| eIF4e-like | 0 | DIRECT |
| BSD domain-like | 0 | DIRECT |
| Mediator hinge subcomplex-like | 0 | DIRECT |
| FAH | 0 | DIRECT |
| ADP-ribosylation | 0 | DIRECT |
| HesB-like domain | 0 | DIRECT |
| RNA-binding domain, RBD | 0.000002521 | DIRECT |
| Thioredoxin-like | 0.00002616 | DIRECT |
| Chaperone J-domain | 0.000292 | DIRECT |
| WD40 repeat-like | 0.0004107 | DIRECT |
| Nucleic acid-binding proteins | 0.0007373 | DIRECT |
| ARM repeat | 0.0009278 | DIRECT |
| RING/U-box | 0.001251 | INHERITED FROM: phyllome epidermis || leaf trichome || leaf epidermis || phyllome trichome |
| CAD & PB1 domains | 0.001866 | INHERITED FROM: quiescent center |
| Ribosomal protein S5 domain 2-like | 0.004191 | INHERITED FROM: stomatal complex || shoot epidermis || guard cell || epidermis || shoot epidermal cell |
| P-loop containing nucleoside triphosphate hydrolases | 0.008546 | INHERITED FROM: guard cell |
| Actin-like ATPase domain | 0.0279 | INHERITED FROM: trichome |
| HAD-like | 0.03748 | INHERITED FROM: parenchyma cell || mesophyll cell || ground tissue cell || phyllome primordium || vascular leaf primordium |
| Aldolase | 0.08282 | INHERITED FROM: inflorescence meristem || portion of meristem tissue |
| Trimeric LpxA-like enzymes | 0.1484 | INHERITED FROM: parenchyma cell || companion cell || portion of vascular tissue || portion of ground tissue || phloem || leaf mesophyll || ground tissue cell || vascular system || chlorenchyma |
| ClpP/crotonase | 0.1551 | INHERITED FROM: portion of meristem tissue |
| GST C-terminal domain-like | 0.1815 | INHERITED FROM: portion of vascular tissue || phloem |
| SAICAR synthase-like | 0.2058 | INHERITED FROM: root epidermis || root epidermal cell |
| DNA-binding domain | 0.2131 | INHERITED FROM: fruit dehiscence zone || dehiscence zone |
| DNase I-like | 0.2208 | INHERITED FROM: trichoblast || root hair cell |
| CheY-like | 0.3004 | INHERITED FROM: phyllome vascular system || shoot meristem || apical meristem || shoot apical meristem || shoot system vascular system || leaf vascular system || vascular system |
| HLH, helix-loop-helix DNA-binding domain | 0.315 | INHERITED FROM: root epidermis || portion of transmitting tissue || root epidermal cell |
| Thiolase-like | 0.3426 | INHERITED FROM: phyllome epidermis || leaf trichome || leaf epidermis || phyllome trichome |
| Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.3441 | INHERITED FROM: root primordium || primordium || lateral root primordium |
| GroES-like | 0.3874 | INHERITED FROM: portion of vascular tissue || vascular system |
| Histone-fold | 0.4375 | INHERITED FROM: root primordium || lateral root apical meristem || reproductive shoot apical meristem || shoot meristem || root meristem || shoot apical meristem || root apical meristem || primordium || lateral root primordium || flower meristem |
| ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.4766 | INHERITED FROM: root meristem |
| ABC transporter transmembrane region | 0.4766 | INHERITED FROM: vascular bundle || portion of ground tissue |
| Calcium ATPase, transmembrane domain M | 0.506 | INHERITED FROM: parenchyma cell || portion of ground tissue || mesophyll cell || ground tissue cell |
| Calcium ATPase, transduction domain A | 0.506 | INHERITED FROM: parenchyma cell || portion of ground tissue || mesophyll cell || ground tissue cell |
| POZ domain | 0.5176 | INHERITED FROM: embryo vascular system || shoot apical meristem || seed coat || abscission zone || shoot axis cortex |
| FYVE/PHD zinc finger | 0.6371 | INHERITED FROM: shoot meristem || apical meristem || shoot apical meristem |
| Nucleotide-diphospho-sugar transferases | 0.8445 | INHERITED FROM: secondary xylem || phyllome epidermis || portion of vascular tissue || portion of ground tissue || phloem || leaf trichome || leaf mesophyll || trichome || ground tissue cell || leaf epidermis || interfascicular region || vascular system |
| MFS general substrate transporter | 0.9023 | INHERITED FROM: phyllome vascular system || portion of vascular tissue || vascular system || root cortex |
| Cullin repeat-like | 0.9154 | INHERITED FROM: root epidermis || root primordium || root endodermis || root meristem || root parenchyma || portion of ground tissue || endodermis || root epidermal cell || portion of secretory tissue || primordium || lateral root primordium || root hair cell || vascular system || root cortex || lateral root cap |
| Aquaporin-like | 0.9496 | INHERITED FROM: root epidermis || portion of vascular tissue || portion of ground tissue || vascular system || root cortex |
| Bet v1-like | 0.9764 | INHERITED FROM: integument || shoot meristem || apical meristem || trichome || endosperm || shoot apical meristem || primordium || flower meristem || phyllome primordium || vascular leaf primordium |
| Concanavalin A-like lectins/glucanases | 0.9793 | INHERITED FROM: root epidermal cell |
| L domain-like | 1 | INHERITED FROM: cambium |
| Mannose-binding lectins | 1 | INHERITED FROM: portion of vascular tissue |
| UDP-Glycosyltransferase/glycogen phosphorylase | 1 | INHERITED FROM: primordium || lateral root primordium || phyllome primordium || vascular leaf primordium |
| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 1 | INHERITED FROM: root primordium || cotyledon vascular system || primordium || lateral root primordium || vascular system |
| Cysteine-rich domain | 1 | INHERITED FROM: root epidermis || root epidermal cell |
| DNA-binding pseudobarrel domain | 1 | INHERITED FROM: ovary placenta || primordium || ovule primordium || placenta |
| NAC domain | 1 | INHERITED FROM: procambium || root parenchyma || portion of vascular tissue || portion of ground tissue || shoot system vascular system || vascular system || xylem |
| Skp1 dimerisation domain-like | 1 | INHERITED FROM: cortex || shoot meristem || apical meristem || shoot apical meristem || seed coat || shoot axis cortex |
| (Trans)glycosidases | 1 | INHERITED FROM: micropylar endosperm || endosperm |
| PR-1-like | 1 | INHERITED FROM: root epidermis || root epidermal cell |
| EF-hand | 1 | INHERITED FROM: chlorenchyma cell || mesophyll cell |
| Homeodomain-like | 1 | INHERITED FROM: integument || phyllome vascular system || ovary replum || shoot meristem || protoxylem || apical meristem || portion of vascular tissue || portion of ground tissue || quiescent center || trichome || shoot apical meristem || shoot system vascular system || primordium || leaf vascular system || flower meristem || phyllome primordium || vascular system || non-hair root epidermal cell || xylem |
| SRF-like | 1 | INHERITED FROM: integument || root parenchyma || apical meristem || parenchyma || root cap || endosperm |
| Cytochrome P450 | 1 | INHERITED FROM: pericarp |
| Heme-dependent peroxidases | 1 | INHERITED FROM: trichoblast || root hair cell |
| Cupredoxins | 1 | INHERITED FROM: cotyledon vascular system || sepal vascular system || papilla cell || phyllome vascular system || phyllome epidermis || flower vascular system || leaf trichome || trichome || leaf epidermis || shoot system vascular system || leaf vascular system || phyllome trichome || vascular system || epidermal pavement cell || petal vascular system |
| Clavaminate synthase-like | 1 | INHERITED FROM: integument || flower vascular system || outer integument |
| Subtilisin-like | 1 | INHERITED FROM: phyllome vascular system || shoot system vascular system || leaf vascular system || vascular system |
| Adenine nucleotide alpha hydrolases-like | 1 | INHERITED FROM: trichoblast |
| Supra-domain (Single) |
FDR (all) |
Annotation (direct or inherited) |
| LysM domain | 0 | Direct |
| Chlorophyll a-b binding protein | 0 | Direct |
| RuBisCO, small subunit | 0 | Direct |
| Diaminopimelate epimerase-like | 0 | Direct |
| Electron transport accessory proteins | 0 | Direct |
| Ribosomal L27 protein-like | 0 | Direct |
| Signal peptide-binding domain | 0 | Direct |
| LuxS/MPP-like metallohydrolase | 0 | Direct |
| RNase III domain-like | 0 | Direct |
| Translation initiation factor IF3, C-terminal domain | 0 | Direct |
| HSP90 C-terminal domain | 0 | Direct |
| Zn-binding ribosomal proteins | 0 | Direct |
| L9 N-domain-like | 0 | Direct |
| Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
| Oxygen-evolving enhancer protein 3, | 0 | Direct |
| Thioesterase/thiol ester dehydrase-isomerase | 0 | Direct |
| post-AAA+ oligomerization domain-like | 0 | Direct |
| GAF domain-like | 0 | Direct |
| ACT-like | 0 | Direct |
| Peptidyl-tRNA hydrolase-like | 0 | Direct |
| Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
| ALDH-like | 0 | Direct |
| Glutathione synthetase ATP-binding domain-like | 0 | Direct |
| Ribosomal protein L39e | 0 | Direct |
| Ribosomal protein S6 | 0 | Direct |
| HRDC-like | 0 | Direct |
| SH2 domain | 0 | Direct |
| Heme oxygenase-like | 0 | Direct |
| Nicotinate/Quinolinate PRTase C-terminal domain-like | 0 | Direct |
| NSFL1 (p97 ATPase) cofactor p47, SEP domain | 0 | Direct |
| SIS domain | 0 | Direct |
| lambda repressor-like DNA-binding domains | 0 | Direct |
| JAB1/MPN domain | 0 | Direct |
| Carbohydrate phosphatase | 0 | Direct |
| Elongation factor TFIIS domain 2 | 0 | Direct |
| Phosphoglycerate kinase | 0 | Direct |
| RraA-like | 0 | Direct |
| Metallo-hydrolase/oxidoreductase | 0 | Direct |
| Restriction endonuclease-like | 0 | Direct |
| Ribosomal protein S2 | 0 | Direct |
| Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | Direct |
| E2F-DP heterodimerization region | 0 | Direct |
| Dihydrofolate reductase-like | 0 | Direct |
| RecA protein, C-terminal domain | 0 | Direct |
| Ribosomal protein L22 | 0 | Direct |
| 5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
| FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
| beta-carbonic anhydrase, cab | 0 | Direct |
| FAD-linked oxidoreductase | 0 | Direct |
| Formate/glycerate dehydrogenase catalytic domain-like | 0 | Direct |
| FAD-dependent thiol oxidase | 0 | Direct |
| Heat shock protein 70kD (HSP70), C-terminal subdomain | 0 | Direct |
| Alpha subunit of glutamate synthase, C-terminal domain | 0 | Direct |
| PreATP-grasp domain | 0 | Direct |
| Type II DNA topoisomerase | 0 | Direct |
| EGF/Laminin | 0 | Direct |
| Inorganic pyrophosphatase | 0 | Direct |
| PX domain | 0 | Direct |
| TAZ domain | 0 | Direct |
| Prokaryotic type KH domain (KH-domain type II) | 0 | Direct |
| Endosomal sorting complex assembly domain | 0 | Direct |
| PLP-binding barrel | 0 | Direct |
| SAP domain | 0 | Direct |
| Thymidylate synthase/dCMP hydroxymethylase | 0 | Direct |
| HD-domain/PDEase-like | 0 | Direct |
| Ribosomal protein L10-like | 0 | Direct |
| eEF-1beta-like | 0 | Direct |
| 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | Direct |
| BolA-like | 0 | Direct |
| MoaD/ThiS | 0 | Direct |
| CYTH-like phosphatases | 0 | Direct |
| Trm112p-like | 0 | Direct |
| LEA14-like | 0 | Direct |
| Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
| Translation initiation factor IF3, N-terminal domain | 0 | Direct |
| Nucleoside diphosphate kinase, NDK | 0 | Direct |
| Phosphoglucomutase, first 3 domains | 0 | Direct |
| Prefoldin | 0 | Direct |
| Prokaryotic type I DNA topoisomerase | 0 | Direct |
| Outer arm dynein light chain 1 | 0 | Direct |
| ITPase-like | 0 | Direct |
| R3H domain | 0 | Direct |
| Ribonuclease PH domain 2-like | 0 | Direct |
| Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
| S13-like H2TH domain | 0 | Direct |
| P-domain of calnexin/calreticulin | 0 | Direct |
| BAR/IMD domain-like | 0 | Direct |
| Caspase-like | 0 | Direct |
| LigT-like | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain | 0 | Direct |
| Band 7/SPFH domain | 0 | Direct |
| Insert subdomain of RNA polymerase alpha subunit | 0 | Direct |
| UROD/MetE-like | 0 | Direct |
| AlbA-like | 0 | Direct |
| Tudor/PWWP/MBT | 0 | Direct |
| DNA breaking-rejoining enzymes | 0 | Direct |
| Ligand-binding domain in the NO signalling and Golgi transport | 0 | Direct |
| Tetrahydrobiopterin biosynthesis enzymes-like | 0 | Direct |
| Ribulose-phoshate binding barrel | 0 | Direct |
| GlnB-like | 0 | Direct |
| Rps17e-like | 0 | Direct |
| Heme-dependent catalase-like | 0 | Direct |
| Sigma2 domain of RNA polymerase sigma factors | 0 | Direct |
| Amine oxidase N-terminal region | 0 | Direct |
| XPC-binding domain | 0 | Direct |
| VC0467-like | 0 | Direct |
| Serine metabolism enzymes domain | 0 | Direct |
| MurD-like peptide ligases, peptide-binding domain | 0 | Direct |
| Domain of the SRP/SRP receptor G-proteins | 0 | Direct |
| Smc hinge domain | 0 | Direct |
| HIT-like | 0 | Direct |
| Nitrite and sulphite reductase 4Fe-4S domain-like | 0 | Direct |
| LeuD/IlvD-like | 0 | Direct |
| Creatinase/prolidase N-terminal domain | 0 | Direct |
| AF1104-like | 0 | Direct |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
| SMR domain-like | 0 | Direct |
| YrdC/RibB | 0 | Direct |
| Ribosomal L11/L12e N-terminal domain | 0 | Direct |
| Carbamate kinase-like | 0 | Direct |
| GINS helical bundle-like | 0 | Direct |
| GroEL apical domain-like | 0 | Direct |
| TGS-like | 0 | Direct |
| Ribosomal protein L16p/L10e | 0 | Direct |
| DNA repair protein MutS, domain II | 0 | Direct |
| PriA/YqbF domain | 0 | Direct |
| N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0 | Direct |
| Putative isomerase YbhE | 0 | Direct |
| Oxidoreductase molybdopterin-binding domain | 0 | Direct |
| F1F0 ATP synthase subunit C | 0 | Direct |
| Tetrapyrrole methylase | 0 | Direct |
| Ribosomal proteins S24e, L23 and L15e | 0 | Direct |
| Metallo-dependent hydrolases | 0 | Direct |
| Bacterial exopeptidase dimerisation domain | 0 | Direct |
| Mss4-like | 0 | Direct |
| Ferritin-like | 0 | Direct |
| Arp2/3 complex subunits | 0 | Direct |
| Ribosomal protein S3 C-terminal domain | 0 | Direct |
| Ran binding protein zinc finger-like | 0 | Direct |
| L28p-like | 0 | Direct |
| alpha-helical ferredoxin | 0 | Direct |
| EB1 dimerisation domain-like | 0 | Direct |
| Peptidase/esterase 'gauge' domain | 0 | Direct |
| GTPase activation domain, GAP | 0 | Direct |
| LDH C-terminal domain-like | 0 | Direct |
| OMPA-like | 0 | Direct |
| C-terminal autoproteolytic domain of nucleoporin nup98 | 0 | Direct |
| Composite domain of metallo-dependent hydrolases | 0 | Direct |
| Tautomerase/MIF | 0 | Direct |
| Ribosomal protein L6 | 0 | Direct |
| Hypothetical protein TM0160 | 0 | Direct |
| FMN-binding split barrel | 0 | Direct |
| FKBP-like | 0 | Direct |
| Seven-hairpin glycosidases | 0 | Direct |
| PUG domain-like | 0 | Direct |
| Formyltransferase | 0 | Direct |
| Rubredoxin-like | 0 | Direct |
| Ribosomal protein L13 | 0 | Direct |
| HIT/MYND zinc finger-like | 0 | Direct |
| Pseudouridine synthase | 0 | Direct |
| ADC-like | 0 | Direct |
| Aconitase iron-sulfur domain | 0 | Direct |
| Ribosomal protein L31e | 0 | Direct |
| Flavoproteins | 0 | Direct |
| Double Clp-N motif | 0 | Direct |
| Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | Direct |
| Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | Direct |
| alpha/beta knot | 0 | Direct |
| Mog1p/PsbP-like | 0 | Direct |
| Prokaryotic ribosomal protein L17 | 0 | Direct |
| EF-G C-terminal domain-like | 0 | Direct |
| S15/NS1 RNA-binding domain | 0 | Direct |
| Ribosomal proteins L15p and L18e | 0 | Direct |
| DEK C-terminal domain | 0 | Direct |
| Glycolipid transfer protein, GLTP | 0 | Direct |
| Peptidyl-tRNA hydrolase II | 0 | Direct |
| Homocysteine S-methyltransferase | 0 | Direct |
| Release factor | 0 | Direct |
| S-adenosylmethionine synthetase | 0 | Direct |
| Ribosomal protein L4 | 0 | Direct |
| UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
| Tubulin C-terminal domain-like | 0 | Direct |
| Transcription factor IIA (TFIIA), beta-barrel domain | 0 | Direct |
| Protein prenylyltransferase | 0 | Direct |
| Saposin | 0 | Direct |
| Single hybrid motif | 0 | Direct |
| Lipocalins | 0 | Direct |
| GroEL-intermediate domain like | 0 | Direct |
| Tim10-like | 0 | Direct |
| VHP, Villin headpiece domain | 0 | Direct |
| DNA repair protein MutS, domain I | 0 | Direct |
| D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
| Coiled-coil domain of nucleotide exchange factor GrpE | 0 | Direct |
| Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
| L-aspartase-like | 0 | Direct |
| NAP-like | 0 | Direct |
| FtsH protease domain-like | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0 | Direct |
| Rudiment single hybrid motif | 0 | Direct |
| EPT/RTPC-like | 0 | Direct |
| RL5-like | 0 | Direct |
| Probable bacterial effector-binding domain | 0 | Direct |
| Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | Direct |
| Ribosomal protein L19 (L19e) | 0 | Direct |
| Ribosomal protein S10 | 0 | Direct |
| Succinyl-CoA synthetase domains | 0 | Direct |
| Peptide methionine sulfoxide reductase | 0 | Direct |
| Cytochrome c | 0 | Direct |
| Transcription factor IIA (TFIIA), alpha-helical domain | 0 | Direct |
| TATA-box binding protein-like | 0 | Direct |
| MOSC N-terminal domain-like | 0 | Direct |
| Leukotriene A4 hydrolase N-terminal domain | 0 | Direct |
| Pentapeptide repeat-like | 0 | Direct |
| Chorismate mutase II | 0 | Direct |
| Ribosomal protein L29 (L29p) | 0 | Direct |
| Gamma-glutamyl cyclotransferase-like | 0 | Direct |
| Creatinase/aminopeptidase | 0 | Direct |
| ThrRS/AlaRS common domain | 0 | Direct |
| NHL repeat | 0 | Direct |
| Clc chloride channel | 0 | Direct |
| Lipoxigenase | 0 | Direct |
| Cu,Zn superoxide dismutase-like | 0 | Direct |
| Macro domain-like | 0 | Direct |
| SH3-domain | 0 | Direct |
| Nucleoside hydrolase | 0 | Direct |
| Chalcone isomerase | 0 | Direct |
| eIF1-like | 0 | Direct |
| N-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| ValRS/IleRS/LeuRS editing domain | 0 | Direct |
| Chelatase | 0 | Direct |
| Cysteine alpha-hairpin motif | 0 | Direct |
| Poly A polymerase C-terminal region-like | 0 | Direct |
| Radical SAM enzymes | 0 | Direct |
| DNA topoisomerase IV, alpha subunit | 0 | Direct |
| Chromo domain-like | 0 | Direct |
| Heat shock protein 70kD (HSP70), peptide-binding domain | 0 | Direct |
| S-adenosylmethionine decarboxylase | 0 | Direct |
| ATP synthase (F1-ATPase), gamma subunit | 0 | Direct |
| Clathrin adaptor appendage domain | 0 | Direct |
| Sec63 N-terminal domain-like | 0 | Direct |
| beta-N-acetylhexosaminidase-like domain | 0 | Direct |
| Tricorn protease domain 2 | 0 | Direct |
| Head domain of nucleotide exchange factor GrpE | 0 | Direct |
| Allene oxide cyclase-like | 0 | Direct |
| Enolase N-terminal domain-like | 0 | Direct |
| Nicotinate/Quinolinate PRTase N-terminal domain-like | 0 | Direct |
| Helical domain of Sec23/24 | 0 | Direct |
| DnaJ/Hsp40 cysteine-rich domain | 0 | Direct |
| Class II aaRS ABD-related | 0 | Direct |
| FF domain | 0 | Direct |
| Zn-finger domain of Sec23/24 | 0 | Direct |
| Enolase C-terminal domain-like | 0 | Direct |
| Magnesium transport protein CorA, transmembrane region | 0 | Direct |
| Actin-crosslinking proteins | 0 | Direct |
| Initiation factor IF2/eIF5b, domain 3 | 0 | Direct |
| RplX-like | 0 | Direct |
| tRNA-binding arm | 0 | Direct |
| Tubulin nucleotide-binding domain-like | 0 | Direct |
| Crambin-like | 0 | Direct |
| Ribosomal protein L14 | 0 | Direct |
| Hect, E3 ligase catalytic domain | 0 | Direct |
| LexA/Signal peptidase | 0 | Direct |
| C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
| Ammonium transporter | 0 | Direct |
| Cdc48 domain 2-like | 0 | Direct |
| Folate-binding domain | 0 | Direct |
| Staphylococcal nuclease | 0 | Direct |
| ssDNA-binding transcriptional regulator domain | 0 | Direct |
| Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
| Retrovirus zinc finger-like domains | 0 | Direct |
| Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0 | Direct |
| Acyl-CoA binding protein | 0 | Direct |
| RBP11-like subunits of RNA polymerase | 0 | Direct |
| Phospholipase C/P1 nuclease | 0 | Direct |
| Dimeric alpha+beta barrel | 0 | Direct |
| Inosine monophosphate dehydrogenase (IMPDH) | 0 | Direct |
| RibA-like | 0 | Direct |
| BAG domain | 0 | Direct |
| DNA clamp | 0 | Direct |
| Ribosomal protein L1 | 0 | Direct |
| N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 | 0 | Direct |
| Mitochondrial glycoprotein MAM33-like | 0 | Direct |
| LanC-like | 0 | Direct |
| N-terminal, heterodimerisation domain of RBP7 (RpoE) | 0 | Direct |
| ISP domain | 0 | Direct |
| Nucleotidylyl transferase | 0 | Direct |
| Casein kinase II beta subunit | 0 | Direct |
| Tropomyosin | 0 | Direct |
| Preprotein translocase SecE subunit | 0 | Direct |
| YVTN repeat-like/Quinoprotein amine dehydrogenase | 0 | Direct |
| Amine oxidase catalytic domain | 0 | Direct |
| FMN-linked oxidoreductases | 0 | Direct |
| Class II aaRS and biotin synthetases | 0 | Direct |
| Cytochrome c oxidase subunit h | 0 | Direct |
| AMPKBI-like | 0 | Direct |
| Phosphoglucomutase, C-terminal domain | 0 | Direct |
| Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
| Ypt/Rab-GAP domain of gyp1p | 0 | Direct |
| beta and beta-prime subunits of DNA dependent RNA-polymerase | 0 | Direct |
| RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
| Transducin (alpha subunit), insertion domain | 0 | Direct |
| WW domain | 0 | Direct |
| Alpha-L RNA-binding motif | 0 | Direct |
| Activating enzymes of the ubiquitin-like proteins | 0 | Direct |
| SAM/Pointed domain | 0 | Direct |
| Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | Direct |
| Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
| Phosphofructokinase | 0 | Direct |
| beta-sandwich domain of Sec23/24 | 0 | Direct |
| C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
| Ribosomal protein L30p/L7e | 0 | Direct |
| MurD-like peptide ligases, catalytic domain | 0 | Direct |
| Mitochondrial carrier | 0 | Direct |
| Carbon-nitrogen hydrolase | 0 | Direct |
| YhbY-like | 0 | Direct |
| Sec1/munc18-like (SM) proteins | 0 | Direct |
| Expressed protein At2g23090/F21P24.15 | 0 | Direct |
| 4Fe-4S ferredoxins | 0 | Direct |
| Subdomain of clathrin and coatomer appendage domain | 0 | Direct |
| Globin-like | 0 | Direct |
| Cryptochrome/photolyase, N-terminal domain | 0 | Direct |
| eIF4e-like | 0 | Direct |
| BSD domain-like | 0 | Direct |
| Mediator hinge subcomplex-like | 0 | Direct |
| FAH | 0 | Direct |
| ADP-ribosylation | 0 | Direct |
| HesB-like domain | 0 | Direct |
| RNA-binding domain, RBD | 0.000002521 | Direct |
| Thioredoxin-like | 0.00002616 | Direct |
| Chaperone J-domain | 0.000292 | Direct |
| WD40 repeat-like | 0.0004107 | Direct |
| Nucleic acid-binding proteins | 0.0007373 | Direct |
| ARM repeat | 0.0009278 | Direct |
| RING/U-box | 0.001251 | Inherited |
| CAD & PB1 domains | 0.001866 | Inherited |
| Ribosomal protein S5 domain 2-like | 0.004191 | Inherited |
| P-loop containing nucleoside triphosphate hydrolases | 0.008546 | Inherited |
| Actin-like ATPase domain | 0.0279 | Inherited |
| HAD-like | 0.03748 | Inherited |
| Aldolase | 0.08282 | Inherited |
| Trimeric LpxA-like enzymes | 0.1484 | Inherited |
| ClpP/crotonase | 0.1551 | Inherited |
| GST C-terminal domain-like | 0.1815 | Inherited |
| SAICAR synthase-like | 0.2058 | Inherited |
| DNA-binding domain | 0.2131 | Inherited |
| DNase I-like | 0.2208 | Inherited |
| CheY-like | 0.3004 | Inherited |
| HLH, helix-loop-helix DNA-binding domain | 0.315 | Inherited |
| Thiolase-like | 0.3426 | Inherited |
| Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.3441 | Inherited |
| GroES-like | 0.3874 | Inherited |
| Histone-fold | 0.4375 | Inherited |
| ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.4766 | Inherited |
| ABC transporter transmembrane region | 0.4766 | Inherited |
| Calcium ATPase, transmembrane domain M | 0.506 | Inherited |
| Calcium ATPase, transduction domain A | 0.506 | Inherited |
| POZ domain | 0.5176 | Inherited |
| FYVE/PHD zinc finger | 0.6371 | Inherited |
| Nucleotide-diphospho-sugar transferases | 0.8445 | Inherited |
| MFS general substrate transporter | 0.9023 | Inherited |
| Cullin repeat-like | 0.9154 | Inherited |
| Aquaporin-like | 0.9496 | Inherited |
| Bet v1-like | 0.9764 | Inherited |
| Concanavalin A-like lectins/glucanases | 0.9793 | Inherited |
| L domain-like | 1 | Inherited |
| Mannose-binding lectins | 1 | Inherited |
| UDP-Glycosyltransferase/glycogen phosphorylase | 1 | Inherited |
| Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 1 | Inherited |
| Cysteine-rich domain | 1 | Inherited |
| DNA-binding pseudobarrel domain | 1 | Inherited |
| NAC domain | 1 | Inherited |
| Skp1 dimerisation domain-like | 1 | Inherited |
| (Trans)glycosidases | 1 | Inherited |
| PR-1-like | 1 | Inherited |
| EF-hand | 1 | Inherited |
| Homeodomain-like | 1 | Inherited |
| SRF-like | 1 | Inherited |
| Cytochrome P450 | 1 | Inherited |
| Heme-dependent peroxidases | 1 | Inherited |
| Cupredoxins | 1 | Inherited |
| Clavaminate synthase-like | 1 | Inherited |
| Subtilisin-like | 1 | Inherited |
| Adenine nucleotide alpha hydrolases-like | 1 | Inherited |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Duplex) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
53850,55021
53850 - Periplasmic binding protein-like II
55021 - ACT-like | 0 | DIRECT |
51905,55424
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | DIRECT |
54211,54980
54211 - Ribosomal protein S5 domain 2-like
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
54534,54534
54534 - FKBP-like
54534 - FKBP-like | 0 | DIRECT |
53223,51735
53223 - Aminoacid dehydrogenase-like, N-terminal domain
51735 - NAD(P)-binding Rossmann-fold domains | 0 | DIRECT |
75471,75471
75471 - YhbY-like
75471 - YhbY-like | 0 | DIRECT |
117916,117916
117916 - Fe-S cluster assembly (FSCA) domain-like
117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | DIRECT |
81296,52540
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
81333,81333
81333 - F1F0 ATP synthase subunit C
81333 - F1F0 ATP synthase subunit C | 0 | DIRECT |
49723,48484
49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)
48484 - Lipoxigenase | 0 | DIRECT |
55545,51445
55545 - beta-N-acetylhexosaminidase-like domain
51445 - (Trans)glycosidases | 0 | DIRECT |
81301,81891
81301 - Nucleotidyltransferase
81891 - Poly A polymerase C-terminal region-like | 0 | DIRECT |
51045,51045
51045 - WW domain
51045 - WW domain | 0 | DIRECT |
50447,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | DIRECT |
52156,50447
52156 - Initiation factor IF2/eIF5b, domain 3
50447 - Translation proteins | 0 | DIRECT |
57850,54001
57850 - RING/U-box
54001 - Cysteine proteinases | 0 | DIRECT |
57863,48403
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | DIRECT |
49348,55711
49348 - Clathrin adaptor appendage domain
55711 - Subdomain of clathrin and coatomer appendage domain | 0 | DIRECT |
90229,90229
90229 - CCCH zinc finger
90229 - CCCH zinc finger | 0 | DIRECT |
88946,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
53383,53383
53383 - PLP-dependent transferases
53383 - PLP-dependent transferases | 0 | DIRECT |
82199,81822
82199 - SET domain
81822 - RuBisCo LSMT C-terminal, substrate-binding domain | 0 | DIRECT |
52540,54752
52540 - P-loop containing nucleoside triphosphate hydrolases
54752 - RecA protein, C-terminal domain | 0 | DIRECT |
52540,140990
52540 - P-loop containing nucleoside triphosphate hydrolases
140990 - FtsH protease domain-like | 0 | DIRECT |
55874,52172
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | DIRECT |
58014,51064
58014 - Coiled-coil domain of nucleotide exchange factor GrpE
51064 - Head domain of nucleotide exchange factor GrpE | 0 | DIRECT |
103657,50729
103657 - BAR/IMD domain-like
50729 - PH domain-like | 0 | DIRECT |
158702,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
54980,54211
54980 - EF-G C-terminal domain-like
54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
52172,52172
52172 - CheY-like
52172 - CheY-like | 0 | DIRECT |
50447,55186
50447 - Translation proteins
55186 - ThrRS/AlaRS common domain | 0 | DIRECT |
56672,100879
56672 - DNA/RNA polymerases
100879 - Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | DIRECT |
88798,50249
88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE)
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
54171,101936
54171 - DNA-binding domain
101936 - DNA-binding pseudobarrel domain | 0 | DIRECT |
81901,48452
81901 - HCP-like
48452 - TPR-like | 0 | DIRECT |
52743,52025
52743 - Subtilisin-like
52025 - PA domain | 0 | DIRECT |
48592,54849
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like | 0 | DIRECT |
48371,56112
48371 - ARM repeat
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
53098,56672
53098 - Ribonuclease H-like
56672 - DNA/RNA polymerases | 0 | DIRECT |
69065,54768
69065 - RNase III domain-like
54768 - dsRNA-binding domain-like | 0 | DIRECT |
50729,48350
50729 - PH domain-like
48350 - GTPase activation domain, GAP | 0 | DIRECT |
50022,55961
50022 - ISP domain
55961 - Bet v1-like | 0 | DIRECT |
54416,49998
54416 - Amine oxidase N-terminal region
49998 - Amine oxidase catalytic domain | 0 | DIRECT |
82185,82185
82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | DIRECT |
90209,90209
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like | 0 | DIRECT |
54236,57829
54236 - Ubiquitin-like
57829 - Zn-binding ribosomal proteins | 0 | DIRECT |
55920,46785
55920 - Creatinase/aminopeptidase
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
50692,54585
50692 - ADC-like
54585 - Cdc48 domain 2-like | 0 | DIRECT |
48403,52540
48403 - Ankyrin repeat
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
54211,55060
54211 - Ribosomal protein S5 domain 2-like
55060 - GHMP Kinase, C-terminal domain | 0 | DIRECT |
56112,48371
56112 - Protein kinase-like (PK-like)
48371 - ARM repeat | 0 | DIRECT |
50729,57863
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | DIRECT |
46785,144074
46785 - "Winged helix" DNA-binding domain
144074 - E2F-DP heterodimerization region | 0 | DIRECT |
46785,46785
46785 - "Winged helix" DNA-binding domain
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
54768,54211
54768 - dsRNA-binding domain-like
54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
48371,54695
48371 - ARM repeat
54695 - POZ domain | 0 | DIRECT |
52540,47917
52540 - P-loop containing nucleoside triphosphate hydrolases
47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
54637,54637
54637 - Thioesterase/thiol ester dehydrase-isomerase
54637 - Thioesterase/thiol ester dehydrase-isomerase | 0 | DIRECT |
57850,57933
57850 - RING/U-box
57933 - TAZ domain | 0 | DIRECT |
54928,57756
54928 - RNA-binding domain, RBD
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
88723,47807
88723 - PIN domain-like
47807 - 5' to 3' exonuclease, C-terminal subdomain | 0 | DIRECT |
52540,48403
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | DIRECT |
54416,54416
54416 - Amine oxidase N-terminal region
54416 - Amine oxidase N-terminal region | 0 | DIRECT |
57850,54928
57850 - RING/U-box
54928 - RNA-binding domain, RBD | 0 | DIRECT |
53633,55021
53633 - Carbamate kinase-like
55021 - ACT-like | 0 | DIRECT |
53732,52016
53732 - Aconitase iron-sulfur domain
52016 - LeuD/IlvD-like | 0 | DIRECT |
54160,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
48452,81901
48452 - TPR-like
81901 - HCP-like | 0 | DIRECT |
54747,46906
54747 - Ribosomal L11/L12e N-terminal domain
46906 - Ribosomal protein L11, C-terminal domain | 0 | DIRECT |
81698,81698
81698 - FF domain
81698 - FF domain | 0 | DIRECT |
54236,63491
54236 - Ubiquitin-like
63491 - BAG domain | 0 | DIRECT |
56059,51246
56059 - Glutathione synthetase ATP-binding domain-like
51246 - Rudiment single hybrid motif | 0 | DIRECT |
48452,54277
48452 - TPR-like
54277 - CAD & PB1 domains | 0 | DIRECT |
55681,52954
55681 - Class II aaRS and biotin synthetases
52954 - Class II aaRS ABD-related | 0 | DIRECT |
54791,54791
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
55785,55785
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
52172,46689
52172 - CheY-like
46689 - Homeodomain-like | 0 | DIRECT |
46565,57938
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain | 0 | DIRECT |
48403,57850
48403 - Ankyrin repeat
57850 - RING/U-box | 0 | DIRECT |
47005,52777
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | DIRECT |
47576,140612
47576 - Calponin-homology domain, CH-domain
140612 - EB1 dimerisation domain-like | 0 | DIRECT |
52402,52833
52402 - Adenine nucleotide alpha hydrolases-like
52833 - Thioredoxin-like | 0 | DIRECT |
54814,54821
54814 - Prokaryotic type KH domain (KH-domain type II)
54821 - Ribosomal protein S3 C-terminal domain | 0 | DIRECT |
50985,50985
50985 - RCC1/BLIP-II
50985 - RCC1/BLIP-II | 0 | DIRECT |
51735,48179
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | DIRECT |
50993,53474
50993 - Peptidase/esterase 'gauge' domain
53474 - alpha/beta-Hydrolases | 0 | DIRECT |
82919,53300
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | DIRECT |
48403,48403
48403 - Ankyrin repeat
48403 - Ankyrin repeat | 0 | DIRECT |
47473,103506
47473 - EF-hand
103506 - Mitochondrial carrier | 0 | DIRECT |
101690,69065
101690 - PAZ domain
69065 - RNase III domain-like | 0 | DIRECT |
158639,63748
158639 - ENT-like
63748 - Tudor/PWWP/MBT | 0 | DIRECT |
46609,54719
46609 - Fe,Mn superoxide dismutase (SOD), N-terminal domain
54719 - Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | DIRECT |
100920,100934
100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain | 0 | DIRECT |
53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
54160,54160
54160 - Chromo domain-like
54160 - Chromo domain-like | 0 | DIRECT |
53300,57850
53300 - vWA-like
57850 - RING/U-box | 0 | DIRECT |
53187,55031
53187 - Zn-dependent exopeptidases
55031 - Bacterial exopeptidase dimerisation domain | 0 | DIRECT |
53098,47819
53098 - Ribonuclease H-like
47819 - HRDC-like | 0 | DIRECT |
57938,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
52283,51735
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains | 0 | DIRECT |
46689,51905
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain | 0 | DIRECT |
55874,54211
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
47661,58038
47661 - t-snare proteins
58038 - SNARE fusion complex | 0 | DIRECT |
54695,50978
54695 - POZ domain
50978 - WD40 repeat-like | 0 | DIRECT |
64356,49447
64356 - SNARE-like
49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | DIRECT |
51735,143548
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | DIRECT |
47592,47592
47592 - SWIB/MDM2 domain
47592 - SWIB/MDM2 domain | 0 | DIRECT |
50156,52096
50156 - PDZ domain-like
52096 - ClpP/crotonase | 0 | DIRECT |
56553,55257
56553 - Insert subdomain of RNA polymerase alpha subunit
55257 - RBP11-like subunits of RNA polymerase | 0 | DIRECT |
50249,55681
50249 - Nucleic acid-binding proteins
55681 - Class II aaRS and biotin synthetases | 0 | DIRECT |
55481,53137
55481 - N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
53137 - Translational machinery components | 0 | DIRECT |
52025,57850
52025 - PA domain
57850 - RING/U-box | 0 | DIRECT |
48371,50978
48371 - ARM repeat
50978 - WD40 repeat-like | 0 | DIRECT |
55785,81383
55785 - PYP-like sensor domain (PAS domain)
81383 - F-box domain | 0 | DIRECT |
50978,50998
50978 - WD40 repeat-like
50998 - Quinoprotein alcohol dehydrogenase-like | 0 | DIRECT |
52540,90002
52540 - P-loop containing nucleoside triphosphate hydrolases
90002 - Hypothetical protein YjiA, C-terminal domain | 0 | DIRECT |
90229,50978
90229 - CCCH zinc finger
50978 - WD40 repeat-like | 0 | DIRECT |
141673,50800
141673 - MOSC N-terminal domain-like
50800 - PK beta-barrel domain-like | 0 | DIRECT |
55781,47384
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase | 0 | DIRECT |
52087,101576
52087 - CRAL/TRIO domain
101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
57850,46689
57850 - RING/U-box
46689 - Homeodomain-like | 0 | DIRECT |
47762,47762
47762 - PAH2 domain
47762 - PAH2 domain | 0 | DIRECT |
48452,46565
48452 - TPR-like
46565 - Chaperone J-domain | 0 | DIRECT |
52540,52317
52540 - P-loop containing nucleoside triphosphate hydrolases
52317 - Class I glutamine amidotransferase-like | 0 | DIRECT |
49899,63887
49899 - Concanavalin A-like lectins/glucanases
63887 - P-domain of calnexin/calreticulin | 0 | DIRECT |
54849,52029
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | DIRECT |
54211,54211
54211 - Ribosomal protein S5 domain 2-like
54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
51338,51556
51338 - Composite domain of metallo-dependent hydrolases
51556 - Metallo-dependent hydrolases | 0 | DIRECT |
63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | DIRECT |
102848,54236
102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
54236 - Ubiquitin-like | 0 | DIRECT |
56053,56053
56053 - Ribosomal protein L6
56053 - Ribosomal protein L6 | 0 | DIRECT |
118310,118310
118310 - AN1-like Zinc finger
118310 - AN1-like Zinc finger | 0 | DIRECT |
48179,52413
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
54211,55666
54211 - Ribosomal protein S5 domain 2-like
55666 - Ribonuclease PH domain 2-like | 0 | DIRECT |
55781,55781
55781 - GAF domain-like
55781 - GAF domain-like | 0 | DIRECT |
47923,47923
47923 - Ypt/Rab-GAP domain of gyp1p
47923 - Ypt/Rab-GAP domain of gyp1p | 0 | DIRECT |
52490,55307
52490 - Tubulin nucleotide-binding domain-like
55307 - Tubulin C-terminal domain-like | 0 | DIRECT |
81383,54518
81383 - F-box domain
54518 - Tubby C-terminal domain-like | 0 | DIRECT |
54826,51604
54826 - Enolase N-terminal domain-like
51604 - Enolase C-terminal domain-like | 0 | DIRECT |
47364,52540
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
51230,47005
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | DIRECT |
90229,54928
90229 - CCCH zinc finger
54928 - RNA-binding domain, RBD | 0 | DIRECT |
57756,57756
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
52540,54211
52540 - P-loop containing nucleoside triphosphate hydrolases
54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
50630,47862
50630 - Acid proteases
47862 - Saposin | 0 | DIRECT |
55186,55681
55186 - ThrRS/AlaRS common domain
55681 - Class II aaRS and biotin synthetases | 0 | DIRECT |
55753,55753
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins | 0 | DIRECT |
52374,47323
52374 - Nucleotidylyl transferase
47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | DIRECT |
52540,47446
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | DIRECT |
54364,55200
54364 - Translation initiation factor IF3, N-terminal domain
55200 - Translation initiation factor IF3, C-terminal domain | 0 | DIRECT |
81923,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52317,52317
52317 - Class I glutamine amidotransferase-like
52317 - Class I glutamine amidotransferase-like | 0 | DIRECT |
51735,55347
51735 - NAD(P)-binding Rossmann-fold domains
55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | DIRECT |
53738,55957
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
53067,100920
53067 - Actin-like ATPase domain
100920 - Heat shock protein 70kD (HSP70), peptide-binding domain | 0 | DIRECT |
54695,48452
54695 - POZ domain
48452 - TPR-like | 0 | DIRECT |
54585,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
56235,52402
56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
52402 - Adenine nucleotide alpha hydrolases-like | 0 | DIRECT |
50104,50249
50104 - Translation proteins SH3-like domain
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
47895,52540
47895 - Transducin (alpha subunit), insertion domain
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
110324,50249
110324 - Ribosomal L27 protein-like
50249 - Nucleic acid-binding proteins | 0 | DIRECT |
55021,55021
55021 - ACT-like
55021 - ACT-like | 0 | DIRECT |
143548,55021
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | DIRECT |
81901,81901
81901 - HCP-like
81901 - HCP-like | 0 | DIRECT |
54534,48452
54534 - FKBP-like
48452 - TPR-like | 0 | DIRECT |
109604,81301
109604 - HD-domain/PDEase-like
81301 - Nucleotidyltransferase | 0 | DIRECT |
82171,53474
82171 - DPP6 N-terminal domain-like
53474 - alpha/beta-Hydrolases | 0 | DIRECT |
52540,48340
52540 - P-loop containing nucleoside triphosphate hydrolases
48340 - Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | DIRECT |
48371,48371
48371 - ARM repeat
48371 - ARM repeat | 0 | DIRECT |
81296,51445
81296 - E set domains
51445 - (Trans)glycosidases | 0 | DIRECT |
50249,52540
50249 - Nucleic acid-binding proteins
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
88659,88659
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
54909,54909
54909 - Dimeric alpha+beta barrel
54909 - Dimeric alpha+beta barrel | 0 | DIRECT |
81811,82754
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
52540,81271
52540 - P-loop containing nucleoside triphosphate hydrolases
81271 - TGS-like | 0 | DIRECT |
158702,81296
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | DIRECT |
63737,55486
63737 - Leukotriene A4 hydrolase N-terminal domain
55486 - Metalloproteases ("zincins"), catalytic domain | 0 | DIRECT |
52425,48173
52425 - Cryptochrome/photolyase, N-terminal domain
48173 - Cryptochrome/photolyase FAD-binding domain | 0 | DIRECT |
50249,54791
50249 - Nucleic acid-binding proteins
54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
46689,46785
46689 - Homeodomain-like
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
50249,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
81324,81324
81324 - Voltage-gated potassium channels
81324 - Voltage-gated potassium channels | 0 | DIRECT |
50615,52540
50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
53300,81995
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
81995,81811
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | DIRECT |
81324,47473
81324 - Voltage-gated potassium channels
47473 - EF-hand | 0 | DIRECT |
88697,52374
88697 - PUA domain-like
52374 - Nucleotidylyl transferase | 0 | DIRECT |
53597,55831
53597 - Dihydrofolate reductase-like
55831 - Thymidylate synthase/dCMP hydroxymethylase | 0 | DIRECT |
56219,56219
56219 - DNase I-like
56219 - DNase I-like | 0 | DIRECT |
51905,56425
51905 - FAD/NAD(P)-binding domain
56425 - Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | DIRECT |
56524,81296
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0 | DIRECT |
54695,48403
54695 - POZ domain
48403 - Ankyrin repeat | 0 | DIRECT |
52540,52156
52540 - P-loop containing nucleoside triphosphate hydrolases
52156 - Initiation factor IF2/eIF5b, domain 3 | 0 | DIRECT |
52540,52058
52540 - P-loop containing nucleoside triphosphate hydrolases
52058 - L domain-like | 0 | DIRECT |
101908,56219
101908 - Putative isomerase YbhE
56219 - DNase I-like | 0 | DIRECT |
81383,50978
81383 - F-box domain
50978 - WD40 repeat-like | 0 | DIRECT |
54768,54768
54768 - dsRNA-binding domain-like
54768 - dsRNA-binding domain-like | 0 | DIRECT |
100950,75445
100950 - NagB/RpiA/CoA transferase-like
75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | DIRECT |
46785,158702
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
56059,52210
56059 - Glutathione synthetase ATP-binding domain-like
52210 - Succinyl-CoA synthetase domains | 0 | DIRECT |
51735,56327
51735 - NAD(P)-binding Rossmann-fold domains
56327 - LDH C-terminal domain-like | 0 | DIRECT |
101238,46934
101238 - XPC-binding domain
46934 - UBA-like | 0 | DIRECT |
50677,52374
50677 - ValRS/IleRS/LeuRS editing domain
52374 - Nucleotidylyl transferase | 0 | DIRECT |
55821,142695
55821 - YrdC/RibB
142695 - RibA-like | 0 | DIRECT |
160059,158573
160059 - PriA/YqbF domain
158573 - GINS helical bundle-like | 0 | DIRECT |
81995,82919
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24 | 0 | DIRECT |
51726,51726
51726 - UROD/MetE-like
51726 - UROD/MetE-like | 0 | DIRECT |
53448,51161
53448 - Nucleotide-diphospho-sugar transferases
51161 - Trimeric LpxA-like enzymes | 0 | DIRECT |
52949,53187
52949 - Macro domain-like
53187 - Zn-dependent exopeptidases | 0 | DIRECT |
49599,54695
49599 - TRAF domain-like
54695 - POZ domain | 0 | DIRECT |
55781,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
55021,56112
55021 - ACT-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
54980,54980
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
55785,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like | 0 | DIRECT |
52440,56059
52440 - PreATP-grasp domain
56059 - Glutathione synthetase ATP-binding domain-like | 0 | DIRECT |
47473,51695
47473 - EF-hand
51695 - PLC-like phosphodiesterases | 0 | DIRECT |
52540,48019
52540 - P-loop containing nucleoside triphosphate hydrolases
48019 - post-AAA+ oligomerization domain-like | 0 | DIRECT |
53067,53067
53067 - Actin-like ATPase domain
53067 - Actin-like ATPase domain | 0.007851 | INHERITED FROM: trichome |
57850,48371
57850 - RING/U-box
48371 - ARM repeat | 0.02148 | INHERITED FROM: cotyledon vascular system || parenchyma || chlorenchyma |
52047,52058
52047 - RNI-like
52058 - L domain-like | 0.2395 | INHERITED FROM: anther wall tapetum || tapetum || shoot meristem || apical meristem || shoot apical meristem || microsporangium tapetum |
52833,47616
52833 - Thioredoxin-like
47616 - GST C-terminal domain-like | 0.2932 | INHERITED FROM: portion of vascular tissue || phloem |
53901,53901
53901 - Thiolase-like
53901 - Thiolase-like | 0.4132 | INHERITED FROM: phyllome epidermis || leaf trichome || leaf epidermis || phyllome trichome |
53756,56784
53756 - UDP-Glycosyltransferase/glycogen phosphorylase
56784 - HAD-like | 0.4199 | INHERITED FROM: primordium || phyllome primordium || vascular leaf primordium |
56784,81665
56784 - HAD-like
81665 - Calcium ATPase, transmembrane domain M | 0.4766 | INHERITED FROM: parenchyma cell || portion of ground tissue || mesophyll cell || ground tissue cell |
90123,52540
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases | 0.5015 | INHERITED FROM: vascular bundle || portion of ground tissue |
50129,51735
50129 - GroES-like
51735 - NAD(P)-binding Rossmann-fold domains | 0.5015 | INHERITED FROM: portion of vascular tissue || vascular system |
55961,55961
55961 - Bet v1-like
55961 - Bet v1-like | 0.7878 | INHERITED FROM: shoot meristem || apical meristem || trichome || endosperm || shoot apical meristem || primordium || flower meristem || phyllome primordium || vascular leaf primordium |
52540,90123
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region | 0.8339 | INHERITED FROM: vascular bundle || portion of ground tissue |
49503,49503
49503 - Cupredoxins
49503 - Cupredoxins | 1 | INHERITED FROM: cotyledon vascular system || sepal vascular system || papilla cell || phyllome vascular system || phyllome epidermis || flower vascular system || leaf trichome || trichome || leaf epidermis || shoot system vascular system || leaf vascular system || phyllome trichome || vascular system || epidermal pavement cell || petal vascular system |
57850,57850
57850 - RING/U-box
57850 - RING/U-box | 1 | INHERITED FROM: shoot meristem || apical meristem || shoot apical meristem |
54695,81382
54695 - POZ domain
81382 - Skp1 dimerisation domain-like | 1 | INHERITED FROM: cortex || shoot meristem || apical meristem || shoot apical meristem || seed coat || shoot axis cortex |
101148,51126
101148 - Plant invertase/pectin methylesterase inhibitor
51126 - Pectin lyase-like | 1 | INHERITED FROM: root epidermal cell |
57889,57889
57889 - Cysteine-rich domain
57889 - Cysteine-rich domain | 1 | INHERITED FROM: root epidermis || root epidermal cell |
| Supra-domain (Duplex) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
53850,55021
53850 - Periplasmic binding protein-like II
55021 - ACT-like | 0 | Direct |
51905,55424
51905 - FAD/NAD(P)-binding domain
55424 - FAD/NAD-linked reductases, dimerisation (C-terminal) domain | 0 | Direct |
54211,54980
54211 - Ribosomal protein S5 domain 2-like
54980 - EF-G C-terminal domain-like | 0 | Direct |
54534,54534
54534 - FKBP-like
54534 - FKBP-like | 0 | Direct |
53223,51735
53223 - Aminoacid dehydrogenase-like, N-terminal domain
51735 - NAD(P)-binding Rossmann-fold domains | 0 | Direct |
75471,75471
75471 - YhbY-like
75471 - YhbY-like | 0 | Direct |
117916,117916
117916 - Fe-S cluster assembly (FSCA) domain-like
117916 - Fe-S cluster assembly (FSCA) domain-like | 0 | Direct |
81296,52540
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
81333,81333
81333 - F1F0 ATP synthase subunit C
81333 - F1F0 ATP synthase subunit C | 0 | Direct |
49723,48484
49723 - Lipase/lipooxygenase domain (PLAT/LH2 domain)
48484 - Lipoxigenase | 0 | Direct |
55545,51445
55545 - beta-N-acetylhexosaminidase-like domain
51445 - (Trans)glycosidases | 0 | Direct |
81301,81891
81301 - Nucleotidyltransferase
81891 - Poly A polymerase C-terminal region-like | 0 | Direct |
51045,51045
51045 - WW domain
51045 - WW domain | 0 | Direct |
50447,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | Direct |
52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | Direct |
52156,50447
52156 - Initiation factor IF2/eIF5b, domain 3
50447 - Translation proteins | 0 | Direct |
57850,54001
57850 - RING/U-box
54001 - Cysteine proteinases | 0 | Direct |
57863,48403
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | Direct |
49348,55711
49348 - Clathrin adaptor appendage domain
55711 - Subdomain of clathrin and coatomer appendage domain | 0 | Direct |
90229,90229
90229 - CCCH zinc finger
90229 - CCCH zinc finger | 0 | Direct |
88946,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
53383,53383
53383 - PLP-dependent transferases
53383 - PLP-dependent transferases | 0 | Direct |
82199,81822
82199 - SET domain
81822 - RuBisCo LSMT C-terminal, substrate-binding domain | 0 | Direct |
52540,54752
52540 - P-loop containing nucleoside triphosphate hydrolases
54752 - RecA protein, C-terminal domain | 0 | Direct |
52540,140990
52540 - P-loop containing nucleoside triphosphate hydrolases
140990 - FtsH protease domain-like | 0 | Direct |
55874,52172
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | Direct |
58014,51064
58014 - Coiled-coil domain of nucleotide exchange factor GrpE
51064 - Head domain of nucleotide exchange factor GrpE | 0 | Direct |
103657,50729
103657 - BAR/IMD domain-like
50729 - PH domain-like | 0 | Direct |
158702,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
54980,54211
54980 - EF-G C-terminal domain-like
54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
52172,52172
52172 - CheY-like
52172 - CheY-like | 0 | Direct |
50447,55186
50447 - Translation proteins
55186 - ThrRS/AlaRS common domain | 0 | Direct |
56672,100879
56672 - DNA/RNA polymerases
100879 - Lesion bypass DNA polymerase (Y-family), little finger domain | 0 | Direct |
88798,50249
88798 - N-terminal, heterodimerisation domain of RBP7 (RpoE)
50249 - Nucleic acid-binding proteins | 0 | Direct |
54171,101936
54171 - DNA-binding domain
101936 - DNA-binding pseudobarrel domain | 0 | Direct |
81901,48452
81901 - HCP-like
48452 - TPR-like | 0 | Direct |
52743,52025
52743 - Subtilisin-like
52025 - PA domain | 0 | Direct |
48592,54849
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like | 0 | Direct |
48371,56112
48371 - ARM repeat
56112 - Protein kinase-like (PK-like) | 0 | Direct |
53098,56672
53098 - Ribonuclease H-like
56672 - DNA/RNA polymerases | 0 | Direct |
69065,54768
69065 - RNase III domain-like
54768 - dsRNA-binding domain-like | 0 | Direct |
50729,48350
50729 - PH domain-like
48350 - GTPase activation domain, GAP | 0 | Direct |
50022,55961
50022 - ISP domain
55961 - Bet v1-like | 0 | Direct |
54416,49998
54416 - Amine oxidase N-terminal region
49998 - Amine oxidase catalytic domain | 0 | Direct |
82185,82185
82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
82185 - Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 0 | Direct |
90209,90209
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like | 0 | Direct |
54236,57829
54236 - Ubiquitin-like
57829 - Zn-binding ribosomal proteins | 0 | Direct |
55920,46785
55920 - Creatinase/aminopeptidase
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
50692,54585
50692 - ADC-like
54585 - Cdc48 domain 2-like | 0 | Direct |
48403,52540
48403 - Ankyrin repeat
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
54211,55060
54211 - Ribosomal protein S5 domain 2-like
55060 - GHMP Kinase, C-terminal domain | 0 | Direct |
56112,48371
56112 - Protein kinase-like (PK-like)
48371 - ARM repeat | 0 | Direct |
50729,57863
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | Direct |
46785,144074
46785 - "Winged helix" DNA-binding domain
144074 - E2F-DP heterodimerization region | 0 | Direct |
46785,46785
46785 - "Winged helix" DNA-binding domain
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
54768,54211
54768 - dsRNA-binding domain-like
54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
48371,54695
48371 - ARM repeat
54695 - POZ domain | 0 | Direct |
52540,47917
52540 - P-loop containing nucleoside triphosphate hydrolases
47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
54637,54637
54637 - Thioesterase/thiol ester dehydrase-isomerase
54637 - Thioesterase/thiol ester dehydrase-isomerase | 0 | Direct |
57850,57933
57850 - RING/U-box
57933 - TAZ domain | 0 | Direct |
54928,57756
54928 - RNA-binding domain, RBD
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
88723,47807
88723 - PIN domain-like
47807 - 5' to 3' exonuclease, C-terminal subdomain | 0 | Direct |
52540,48403
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | Direct |
54416,54416
54416 - Amine oxidase N-terminal region
54416 - Amine oxidase N-terminal region | 0 | Direct |
57850,54928
57850 - RING/U-box
54928 - RNA-binding domain, RBD | 0 | Direct |
53633,55021
53633 - Carbamate kinase-like
55021 - ACT-like | 0 | Direct |
53732,52016
53732 - Aconitase iron-sulfur domain
52016 - LeuD/IlvD-like | 0 | Direct |
54160,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
48452,81901
48452 - TPR-like
81901 - HCP-like | 0 | Direct |
54747,46906
54747 - Ribosomal L11/L12e N-terminal domain
46906 - Ribosomal protein L11, C-terminal domain | 0 | Direct |
81698,81698
81698 - FF domain
81698 - FF domain | 0 | Direct |
54236,63491
54236 - Ubiquitin-like
63491 - BAG domain | 0 | Direct |
56059,51246
56059 - Glutathione synthetase ATP-binding domain-like
51246 - Rudiment single hybrid motif | 0 | Direct |
48452,54277
48452 - TPR-like
54277 - CAD & PB1 domains | 0 | Direct |
55681,52954
55681 - Class II aaRS and biotin synthetases
52954 - Class II aaRS ABD-related | 0 | Direct |
54791,54791
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
55785,55785
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
52172,46689
52172 - CheY-like
46689 - Homeodomain-like | 0 | Direct |
46565,57938
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain | 0 | Direct |
48403,57850
48403 - Ankyrin repeat
57850 - RING/U-box | 0 | Direct |
47005,52777
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | Direct |
47576,140612
47576 - Calponin-homology domain, CH-domain
140612 - EB1 dimerisation domain-like | 0 | Direct |
52402,52833
52402 - Adenine nucleotide alpha hydrolases-like
52833 - Thioredoxin-like | 0 | Direct |
54814,54821
54814 - Prokaryotic type KH domain (KH-domain type II)
54821 - Ribosomal protein S3 C-terminal domain | 0 | Direct |
50985,50985
50985 - RCC1/BLIP-II
50985 - RCC1/BLIP-II | 0 | Direct |
51735,48179
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like | 0 | Direct |
50993,53474
50993 - Peptidase/esterase 'gauge' domain
53474 - alpha/beta-Hydrolases | 0 | Direct |
82919,53300
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | Direct |
48403,48403
48403 - Ankyrin repeat
48403 - Ankyrin repeat | 0 | Direct |
47473,103506
47473 - EF-hand
103506 - Mitochondrial carrier | 0 | Direct |
101690,69065
101690 - PAZ domain
69065 - RNase III domain-like | 0 | Direct |
158639,63748
158639 - ENT-like
63748 - Tudor/PWWP/MBT | 0 | Direct |
46609,54719
46609 - Fe,Mn superoxide dismutase (SOD), N-terminal domain
54719 - Fe,Mn superoxide dismutase (SOD), C-terminal domain | 0 | Direct |
100920,100934
100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain | 0 | Direct |
53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | Direct |
54160,54160
54160 - Chromo domain-like
54160 - Chromo domain-like | 0 | Direct |
53300,57850
53300 - vWA-like
57850 - RING/U-box | 0 | Direct |
53187,55031
53187 - Zn-dependent exopeptidases
55031 - Bacterial exopeptidase dimerisation domain | 0 | Direct |
53098,47819
53098 - Ribonuclease H-like
47819 - HRDC-like | 0 | Direct |
57938,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | Direct |
52283,51735
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains | 0 | Direct |
46689,51905
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain | 0 | Direct |
55874,54211
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
47661,58038
47661 - t-snare proteins
58038 - SNARE fusion complex | 0 | Direct |
54695,50978
54695 - POZ domain
50978 - WD40 repeat-like | 0 | Direct |
64356,49447
64356 - SNARE-like
49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor | 0 | Direct |
51735,143548
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | Direct |
47592,47592
47592 - SWIB/MDM2 domain
47592 - SWIB/MDM2 domain | 0 | Direct |
50156,52096
50156 - PDZ domain-like
52096 - ClpP/crotonase | 0 | Direct |
56553,55257
56553 - Insert subdomain of RNA polymerase alpha subunit
55257 - RBP11-like subunits of RNA polymerase | 0 | Direct |
50249,55681
50249 - Nucleic acid-binding proteins
55681 - Class II aaRS and biotin synthetases | 0 | Direct |
55481,53137
55481 - N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
53137 - Translational machinery components | 0 | Direct |
52025,57850
52025 - PA domain
57850 - RING/U-box | 0 | Direct |
48371,50978
48371 - ARM repeat
50978 - WD40 repeat-like | 0 | Direct |
55785,81383
55785 - PYP-like sensor domain (PAS domain)
81383 - F-box domain | 0 | Direct |
50978,50998
50978 - WD40 repeat-like
50998 - Quinoprotein alcohol dehydrogenase-like | 0 | Direct |
52540,90002
52540 - P-loop containing nucleoside triphosphate hydrolases
90002 - Hypothetical protein YjiA, C-terminal domain | 0 | Direct |
90229,50978
90229 - CCCH zinc finger
50978 - WD40 repeat-like | 0 | Direct |
141673,50800
141673 - MOSC N-terminal domain-like
50800 - PK beta-barrel domain-like | 0 | Direct |
55781,47384
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase | 0 | Direct |
52087,101576
52087 - CRAL/TRIO domain
101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
57850,46689
57850 - RING/U-box
46689 - Homeodomain-like | 0 | Direct |
47762,47762
47762 - PAH2 domain
47762 - PAH2 domain | 0 | Direct |
48452,46565
48452 - TPR-like
46565 - Chaperone J-domain | 0 | Direct |
52540,52317
52540 - P-loop containing nucleoside triphosphate hydrolases
52317 - Class I glutamine amidotransferase-like | 0 | Direct |
49899,63887
49899 - Concanavalin A-like lectins/glucanases
63887 - P-domain of calnexin/calreticulin | 0 | Direct |
54849,52029
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | Direct |
54211,54211
54211 - Ribosomal protein S5 domain 2-like
54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
51338,51556
51338 - Composite domain of metallo-dependent hydrolases
51556 - Metallo-dependent hydrolases | 0 | Direct |
63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | Direct |
102848,54236
102848 - NSFL1 (p97 ATPase) cofactor p47, SEP domain
54236 - Ubiquitin-like | 0 | Direct |
56053,56053
56053 - Ribosomal protein L6
56053 - Ribosomal protein L6 | 0 | Direct |
118310,118310
118310 - AN1-like Zinc finger
118310 - AN1-like Zinc finger | 0 | Direct |
48179,52413
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
54211,55666
54211 - Ribosomal protein S5 domain 2-like
55666 - Ribonuclease PH domain 2-like | 0 | Direct |
55781,55781
55781 - GAF domain-like
55781 - GAF domain-like | 0 | Direct |
47923,47923
47923 - Ypt/Rab-GAP domain of gyp1p
47923 - Ypt/Rab-GAP domain of gyp1p | 0 | Direct |
52490,55307
52490 - Tubulin nucleotide-binding domain-like
55307 - Tubulin C-terminal domain-like | 0 | Direct |
81383,54518
81383 - F-box domain
54518 - Tubby C-terminal domain-like | 0 | Direct |
54826,51604
54826 - Enolase N-terminal domain-like
51604 - Enolase C-terminal domain-like | 0 | Direct |
47364,52540
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
51230,47005
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex | 0 | Direct |
90229,54928
90229 - CCCH zinc finger
54928 - RNA-binding domain, RBD | 0 | Direct |
57756,57756
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
52540,54211
52540 - P-loop containing nucleoside triphosphate hydrolases
54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
50630,47862
50630 - Acid proteases
47862 - Saposin | 0 | Direct |
55186,55681
55186 - ThrRS/AlaRS common domain
55681 - Class II aaRS and biotin synthetases | 0 | Direct |
55753,55753
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins | 0 | Direct |
52374,47323
52374 - Nucleotidylyl transferase
47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0 | Direct |
52540,47446
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | Direct |
54364,55200
54364 - Translation initiation factor IF3, N-terminal domain
55200 - Translation initiation factor IF3, C-terminal domain | 0 | Direct |
81923,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52317,52317
52317 - Class I glutamine amidotransferase-like
52317 - Class I glutamine amidotransferase-like | 0 | Direct |
51735,55347
51735 - NAD(P)-binding Rossmann-fold domains
55347 - Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0 | Direct |
53738,55957
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
53067,100920
53067 - Actin-like ATPase domain
100920 - Heat shock protein 70kD (HSP70), peptide-binding domain | 0 | Direct |
54695,48452
54695 - POZ domain
48452 - TPR-like | 0 | Direct |
54585,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
56235,52402
56235 - N-terminal nucleophile aminohydrolases (Ntn hydrolases)
52402 - Adenine nucleotide alpha hydrolases-like | 0 | Direct |
50104,50249
50104 - Translation proteins SH3-like domain
50249 - Nucleic acid-binding proteins | 0 | Direct |
47895,52540
47895 - Transducin (alpha subunit), insertion domain
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
110324,50249
110324 - Ribosomal L27 protein-like
50249 - Nucleic acid-binding proteins | 0 | Direct |
55021,55021
55021 - ACT-like
55021 - ACT-like | 0 | Direct |
143548,55021
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | Direct |
81901,81901
81901 - HCP-like
81901 - HCP-like | 0 | Direct |
54534,48452
54534 - FKBP-like
48452 - TPR-like | 0 | Direct |
109604,81301
109604 - HD-domain/PDEase-like
81301 - Nucleotidyltransferase | 0 | Direct |
82171,53474
82171 - DPP6 N-terminal domain-like
53474 - alpha/beta-Hydrolases | 0 | Direct |
52540,48340
52540 - P-loop containing nucleoside triphosphate hydrolases
48340 - Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0 | Direct |
48371,48371
48371 - ARM repeat
48371 - ARM repeat | 0 | Direct |
81296,51445
81296 - E set domains
51445 - (Trans)glycosidases | 0 | Direct |
50249,52540
50249 - Nucleic acid-binding proteins
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
88659,88659
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
54909,54909
54909 - Dimeric alpha+beta barrel
54909 - Dimeric alpha+beta barrel | 0 | Direct |
81811,82754
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
52540,81271
52540 - P-loop containing nucleoside triphosphate hydrolases
81271 - TGS-like | 0 | Direct |
158702,81296
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | Direct |
63737,55486
63737 - Leukotriene A4 hydrolase N-terminal domain
55486 - Metalloproteases ("zincins"), catalytic domain | 0 | Direct |
52425,48173
52425 - Cryptochrome/photolyase, N-terminal domain
48173 - Cryptochrome/photolyase FAD-binding domain | 0 | Direct |
50249,54791
50249 - Nucleic acid-binding proteins
54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
46689,46785
46689 - Homeodomain-like
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
50249,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
81324,81324
81324 - Voltage-gated potassium channels
81324 - Voltage-gated potassium channels | 0 | Direct |
50615,52540
50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
53300,81995
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
81995,81811
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | Direct |
81324,47473
81324 - Voltage-gated potassium channels
47473 - EF-hand | 0 | Direct |
88697,52374
88697 - PUA domain-like
52374 - Nucleotidylyl transferase | 0 | Direct |
53597,55831
53597 - Dihydrofolate reductase-like
55831 - Thymidylate synthase/dCMP hydroxymethylase | 0 | Direct |
56219,56219
56219 - DNase I-like
56219 - DNase I-like | 0 | Direct |
51905,56425
51905 - FAD/NAD(P)-binding domain
56425 - Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0 | Direct |
56524,81296
56524 - Oxidoreductase molybdopterin-binding domain
81296 - E set domains | 0 | Direct |
54695,48403
54695 - POZ domain
48403 - Ankyrin repeat | 0 | Direct |
52540,52156
52540 - P-loop containing nucleoside triphosphate hydrolases
52156 - Initiation factor IF2/eIF5b, domain 3 | 0 | Direct |
52540,52058
52540 - P-loop containing nucleoside triphosphate hydrolases
52058 - L domain-like | 0 | Direct |
101908,56219
101908 - Putative isomerase YbhE
56219 - DNase I-like | 0 | Direct |
81383,50978
81383 - F-box domain
50978 - WD40 repeat-like | 0 | Direct |
54768,54768
54768 - dsRNA-binding domain-like
54768 - dsRNA-binding domain-like | 0 | Direct |
100950,75445
100950 - NagB/RpiA/CoA transferase-like
75445 - D-ribose-5-phosphate isomerase (RpiA), lid domain | 0 | Direct |
46785,158702
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | Direct |
56059,52210
56059 - Glutathione synthetase ATP-binding domain-like
52210 - Succinyl-CoA synthetase domains | 0 | Direct |
51735,56327
51735 - NAD(P)-binding Rossmann-fold domains
56327 - LDH C-terminal domain-like | 0 | Direct |
101238,46934
101238 - XPC-binding domain
46934 - UBA-like | 0 | Direct |
50677,52374
50677 - ValRS/IleRS/LeuRS editing domain
52374 - Nucleotidylyl transferase | 0 | Direct |
55821,142695
55821 - YrdC/RibB
142695 - RibA-like | 0 | Direct |
160059,158573
160059 - PriA/YqbF domain
158573 - GINS helical bundle-like | 0 | Direct |
81995,82919
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24 | 0 | Direct |
51726,51726
51726 - UROD/MetE-like
51726 - UROD/MetE-like | 0 | Direct |
53448,51161
53448 - Nucleotide-diphospho-sugar transferases
51161 - Trimeric LpxA-like enzymes | 0 | Direct |
52949,53187
52949 - Macro domain-like
53187 - Zn-dependent exopeptidases | 0 | Direct |
49599,54695
49599 - TRAF domain-like
54695 - POZ domain | 0 | Direct |
55781,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
55021,56112
55021 - ACT-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
54980,54980
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | Direct |
55785,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like | 0 | Direct |
52440,56059
52440 - PreATP-grasp domain
56059 - Glutathione synthetase ATP-binding domain-like | 0 | Direct |
47473,51695
47473 - EF-hand
51695 - PLC-like phosphodiesterases | 0 | Direct |
52540,48019
52540 - P-loop containing nucleoside triphosphate hydrolases
48019 - post-AAA+ oligomerization domain-like | 0 | Direct |
53067,53067
53067 - Actin-like ATPase domain
53067 - Actin-like ATPase domain | 0.007851 | Inherited |
57850,48371
57850 - RING/U-box
48371 - ARM repeat | 0.02148 | Inherited |
52047,52058
52047 - RNI-like
52058 - L domain-like | 0.2395 | Inherited |
52833,47616
52833 - Thioredoxin-like
47616 - GST C-terminal domain-like | 0.2932 | Inherited |
53901,53901
53901 - Thiolase-like
53901 - Thiolase-like | 0.4132 | Inherited |
53756,56784
53756 - UDP-Glycosyltransferase/glycogen phosphorylase
56784 - HAD-like | 0.4199 | Inherited |
56784,81665
56784 - HAD-like
81665 - Calcium ATPase, transmembrane domain M | 0.4766 | Inherited |
90123,52540
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases | 0.5015 | Inherited |
50129,51735
50129 - GroES-like
51735 - NAD(P)-binding Rossmann-fold domains | 0.5015 | Inherited |
55961,55961
55961 - Bet v1-like
55961 - Bet v1-like | 0.7878 | Inherited |
52540,90123
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region | 0.8339 | Inherited |
49503,49503
49503 - Cupredoxins
49503 - Cupredoxins | 1 | Inherited |
57850,57850
57850 - RING/U-box
57850 - RING/U-box | 1 | Inherited |
54695,81382
54695 - POZ domain
81382 - Skp1 dimerisation domain-like | 1 | Inherited |
101148,51126
101148 - Plant invertase/pectin methylesterase inhibitor
51126 - Pectin lyase-like | 1 | Inherited |
57889,57889
57889 - Cysteine-rich domain
57889 - Cysteine-rich domain | 1 | Inherited |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Jump to [ Top · Hierarchy ]
Supra-domain (Triple) in N- to C-terminal order( show details)
Highlighted in gray are those with FDR>0.001
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
54160,54160,52540
54160 - Chromo domain-like
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
81383,117281,117281
81383 - F-box domain
117281 - Kelch motif
117281 - Kelch motif | 0 | DIRECT |
46785,158702,81296
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | DIRECT |
103657,50729,57863
103657 - BAR/IMD domain-like
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | DIRECT |
82919,53300,81995
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | DIRECT |
54416,54416,49998
54416 - Amine oxidase N-terminal region
54416 - Amine oxidase N-terminal region
49998 - Amine oxidase catalytic domain | 0 | DIRECT |
50692,54585,52540
50692 - ADC-like
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
52540,52540,46785
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain | 0 | DIRECT |
81296,52540,48403
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | DIRECT |
55186,55681,52954
55186 - ThrRS/AlaRS common domain
55681 - Class II aaRS and biotin synthetases
52954 - Class II aaRS ABD-related | 0 | DIRECT |
81296,51445,51011
81296 - E set domains
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | DIRECT |
54160,52540,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
54534,54534,48452
54534 - FKBP-like
54534 - FKBP-like
48452 - TPR-like | 0 | DIRECT |
55785,55781,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
55781 - GAF domain-like | 0 | DIRECT |
46785,158702,52540
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
53738,53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | DIRECT |
50615,52540,47917
50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
52540 - P-loop containing nucleoside triphosphate hydrolases
47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | DIRECT |
54534,54534,54534
54534 - FKBP-like
54534 - FKBP-like
54534 - FKBP-like | 0 | DIRECT |
52058,52047,52058
52058 - L domain-like
52047 - RNI-like
52058 - L domain-like | 0 | DIRECT |
47364,52540,47446
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | DIRECT |
81995,82919,53300
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | DIRECT |
46689,51905,54373
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain
54373 - FAD-linked reductases, C-terminal domain | 0 | DIRECT |
110324,50249,54791
110324 - Ribosomal L27 protein-like
50249 - Nucleic acid-binding proteins
54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
54791,54791,54791
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | DIRECT |
52833,52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | DIRECT |
90229,90229,90229
90229 - CCCH zinc finger
90229 - CCCH zinc finger
90229 - CCCH zinc finger | 0 | DIRECT |
52540,46785,158702
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | DIRECT |
46565,57938,49493
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
47473,51695,49562
47473 - EF-hand
51695 - PLC-like phosphodiesterases
49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | DIRECT |
52540,50447,54980
52540 - P-loop containing nucleoside triphosphate hydrolases
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
55785,81383,117281
55785 - PYP-like sensor domain (PAS domain)
81383 - F-box domain
117281 - Kelch motif | 0 | DIRECT |
57903,57903,55729
57903 - FYVE/PHD zinc finger
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | DIRECT |
52540,52156,50447
52540 - P-loop containing nucleoside triphosphate hydrolases
52156 - Initiation factor IF2/eIF5b, domain 3
50447 - Translation proteins | 0 | DIRECT |
158702,52540,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
90209,90209,90209
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like | 0 | DIRECT |
52440,56059,51246
52440 - PreATP-grasp domain
56059 - Glutathione synthetase ATP-binding domain-like
51246 - Rudiment single hybrid motif | 0 | DIRECT |
55781,55781,55785
55781 - GAF domain-like
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
53738,53738,55957
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | DIRECT |
57850,57850,57933
57850 - RING/U-box
57850 - RING/U-box
57933 - TAZ domain | 0 | DIRECT |
52047,52058,56112
52047 - RNI-like
52058 - L domain-like
56112 - Protein kinase-like (PK-like) | 0 | DIRECT |
81383,52047,52047
81383 - F-box domain
52047 - RNI-like
52047 - RNI-like | 0 | DIRECT |
53067,100920,100934
53067 - Actin-like ATPase domain
100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain | 0 | DIRECT |
54980,54211,54980
54980 - EF-G C-terminal domain-like
54211 - Ribosomal protein S5 domain 2-like
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
52283,51735,143548
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | DIRECT |
57938,49493,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | DIRECT |
48592,54849,52029
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | DIRECT |
55781,47384,55874
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | DIRECT |
50249,57756,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | DIRECT |
53633,55021,55021
53633 - Carbamate kinase-like
55021 - ACT-like
55021 - ACT-like | 0 | DIRECT |
50729,57863,48403
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | DIRECT |
55781,55785,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | DIRECT |
81698,81698,81698
81698 - FF domain
81698 - FF domain
81698 - FF domain | 0 | DIRECT |
48371,48371,48371
48371 - ARM repeat
48371 - ARM repeat
48371 - ARM repeat | 0 | DIRECT |
51735,48179,52413
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | DIRECT |
55481,53137,55315
55481 - N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
53137 - Translational machinery components
55315 - L30e-like | 0 | DIRECT |
57850,48371,48371
57850 - RING/U-box
48371 - ARM repeat
48371 - ARM repeat | 0 | DIRECT |
50447,54980,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | DIRECT |
54695,48452,48452
54695 - POZ domain
48452 - TPR-like
48452 - TPR-like | 0 | DIRECT |
81923,52540,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
48452,48452,48452
48452 - TPR-like
48452 - TPR-like
48452 - TPR-like | 0 | DIRECT |
55973,55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | DIRECT |
54585,52540,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | DIRECT |
88946,88659,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | DIRECT |
53067,53067,100920
53067 - Actin-like ATPase domain
53067 - Actin-like ATPase domain
100920 - Heat shock protein 70kD (HSP70), peptide-binding domain | 0 | DIRECT |
47384,55874,52172
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | DIRECT |
51735,143548,55021
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | DIRECT |
51230,47005,52777
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | DIRECT |
49785,49785,51445
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like
51445 - (Trans)glycosidases | 0 | DIRECT |
63411,63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | DIRECT |
53300,81995,81811
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | DIRECT |
55753,55753,55753
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins | 0 | DIRECT |
46938,52087,101576
46938 - CRAL/TRIO N-terminal domain
52087 - CRAL/TRIO domain
101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | DIRECT |
48452,48452,46565
48452 - TPR-like
48452 - TPR-like
46565 - Chaperone J-domain | 0 | DIRECT |
50447,54980,54211
50447 - Translation proteins
54980 - EF-G C-terminal domain-like
54211 - Ribosomal protein S5 domain 2-like | 0 | DIRECT |
81995,81811,82754
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | DIRECT |
81324,81324,47473
81324 - Voltage-gated potassium channels
81324 - Voltage-gated potassium channels
47473 - EF-hand | 0 | DIRECT |
90123,52540,90123
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region | 0.8609 | INHERITED FROM: vascular bundle || portion of ground tissue |
52540,90123,52540
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases | 0.8609 | INHERITED FROM: vascular bundle || portion of ground tissue |
| Supra-domain (Triple) in N- to C-terminal order |
FDR (all) |
Annotation (direct or inherited) |
54160,54160,52540
54160 - Chromo domain-like
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
81383,117281,117281
81383 - F-box domain
117281 - Kelch motif
117281 - Kelch motif | 0 | Direct |
46785,158702,81296
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
81296 - E set domains | 0 | Direct |
103657,50729,57863
103657 - BAR/IMD domain-like
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger | 0 | Direct |
82919,53300,81995
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24 | 0 | Direct |
54416,54416,49998
54416 - Amine oxidase N-terminal region
54416 - Amine oxidase N-terminal region
49998 - Amine oxidase catalytic domain | 0 | Direct |
50692,54585,52540
50692 - ADC-like
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
52540,52540,46785
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain | 0 | Direct |
81296,52540,48403
81296 - E set domains
52540 - P-loop containing nucleoside triphosphate hydrolases
48403 - Ankyrin repeat | 0 | Direct |
55186,55681,52954
55186 - ThrRS/AlaRS common domain
55681 - Class II aaRS and biotin synthetases
52954 - Class II aaRS ABD-related | 0 | Direct |
81296,51445,51011
81296 - E set domains
51445 - (Trans)glycosidases
51011 - Glycosyl hydrolase domain | 0 | Direct |
54160,52540,52540
54160 - Chromo domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
54534,54534,48452
54534 - FKBP-like
54534 - FKBP-like
48452 - TPR-like | 0 | Direct |
55785,55781,55781
55785 - PYP-like sensor domain (PAS domain)
55781 - GAF domain-like
55781 - GAF domain-like | 0 | Direct |
46785,158702,52540
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
53738,53738,53738
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains | 0 | Direct |
50615,52540,47917
50615 - N-terminal domain of alpha and beta subunits of F1 ATP synthase
52540 - P-loop containing nucleoside triphosphate hydrolases
47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0 | Direct |
54534,54534,54534
54534 - FKBP-like
54534 - FKBP-like
54534 - FKBP-like | 0 | Direct |
52058,52047,52058
52058 - L domain-like
52047 - RNI-like
52058 - L domain-like | 0 | Direct |
47364,52540,47446
47364 - Domain of the SRP/SRP receptor G-proteins
52540 - P-loop containing nucleoside triphosphate hydrolases
47446 - Signal peptide-binding domain | 0 | Direct |
81995,82919,53300
81995 - beta-sandwich domain of Sec23/24
82919 - Zn-finger domain of Sec23/24
53300 - vWA-like | 0 | Direct |
46689,51905,54373
46689 - Homeodomain-like
51905 - FAD/NAD(P)-binding domain
54373 - FAD-linked reductases, C-terminal domain | 0 | Direct |
110324,50249,54791
110324 - Ribosomal L27 protein-like
50249 - Nucleic acid-binding proteins
54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
54791,54791,54791
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I)
54791 - Eukaryotic type KH-domain (KH-domain type I) | 0 | Direct |
52833,52833,52833
52833 - Thioredoxin-like
52833 - Thioredoxin-like
52833 - Thioredoxin-like | 0 | Direct |
90229,90229,90229
90229 - CCCH zinc finger
90229 - CCCH zinc finger
90229 - CCCH zinc finger | 0 | Direct |
52540,46785,158702
52540 - P-loop containing nucleoside triphosphate hydrolases
46785 - "Winged helix" DNA-binding domain
158702 - Sec63 N-terminal domain-like | 0 | Direct |
46565,57938,49493
46565 - Chaperone J-domain
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | Direct |
47473,51695,49562
47473 - EF-hand
51695 - PLC-like phosphodiesterases
49562 - C2 domain (Calcium/lipid-binding domain, CaLB) | 0 | Direct |
52540,50447,54980
52540 - P-loop containing nucleoside triphosphate hydrolases
50447 - Translation proteins
54980 - EF-G C-terminal domain-like | 0 | Direct |
55785,81383,117281
55785 - PYP-like sensor domain (PAS domain)
81383 - F-box domain
117281 - Kelch motif | 0 | Direct |
57903,57903,55729
57903 - FYVE/PHD zinc finger
57903 - FYVE/PHD zinc finger
55729 - Acyl-CoA N-acyltransferases (Nat) | 0 | Direct |
52540,52156,50447
52540 - P-loop containing nucleoside triphosphate hydrolases
52156 - Initiation factor IF2/eIF5b, domain 3
50447 - Translation proteins | 0 | Direct |
158702,52540,52540
158702 - Sec63 N-terminal domain-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
90209,90209,90209
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like
90209 - Ran binding protein zinc finger-like | 0 | Direct |
52440,56059,51246
52440 - PreATP-grasp domain
56059 - Glutathione synthetase ATP-binding domain-like
51246 - Rudiment single hybrid motif | 0 | Direct |
55781,55781,55785
55781 - GAF domain-like
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
53738,53738,55957
53738 - Phosphoglucomutase, first 3 domains
53738 - Phosphoglucomutase, first 3 domains
55957 - Phosphoglucomutase, C-terminal domain | 0 | Direct |
57850,57850,57933
57850 - RING/U-box
57850 - RING/U-box
57933 - TAZ domain | 0 | Direct |
52047,52058,56112
52047 - RNI-like
52058 - L domain-like
56112 - Protein kinase-like (PK-like) | 0 | Direct |
81383,52047,52047
81383 - F-box domain
52047 - RNI-like
52047 - RNI-like | 0 | Direct |
53067,100920,100934
53067 - Actin-like ATPase domain
100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain | 0 | Direct |
54980,54211,54980
54980 - EF-G C-terminal domain-like
54211 - Ribosomal protein S5 domain 2-like
54980 - EF-G C-terminal domain-like | 0 | Direct |
52283,51735,143548
52283 - Formate/glycerate dehydrogenase catalytic domain-like
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain | 0 | Direct |
57938,49493,49493
57938 - DnaJ/Hsp40 cysteine-rich domain
49493 - HSP40/DnaJ peptide-binding domain
49493 - HSP40/DnaJ peptide-binding domain | 0 | Direct |
48592,54849,52029
48592 - GroEL equatorial domain-like
54849 - GroEL-intermediate domain like
52029 - GroEL apical domain-like | 0 | Direct |
55781,47384,55874
55781 - GAF domain-like
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0 | Direct |
50249,57756,57756
50249 - Nucleic acid-binding proteins
57756 - Retrovirus zinc finger-like domains
57756 - Retrovirus zinc finger-like domains | 0 | Direct |
53633,55021,55021
53633 - Carbamate kinase-like
55021 - ACT-like
55021 - ACT-like | 0 | Direct |
50729,57863,48403
50729 - PH domain-like
57863 - ArfGap/RecO-like zinc finger
48403 - Ankyrin repeat | 0 | Direct |
55781,55785,55785
55781 - GAF domain-like
55785 - PYP-like sensor domain (PAS domain)
55785 - PYP-like sensor domain (PAS domain) | 0 | Direct |
81698,81698,81698
81698 - FF domain
81698 - FF domain
81698 - FF domain | 0 | Direct |
48371,48371,48371
48371 - ARM repeat
48371 - ARM repeat
48371 - ARM repeat | 0 | Direct |
51735,48179,52413
51735 - NAD(P)-binding Rossmann-fold domains
48179 - 6-phosphogluconate dehydrogenase C-terminal domain-like
52413 - UDP-glucose/GDP-mannose dehydrogenase C-terminal domain | 0 | Direct |
55481,53137,55315
55481 - N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
53137 - Translational machinery components
55315 - L30e-like | 0 | Direct |
57850,48371,48371
57850 - RING/U-box
48371 - ARM repeat
48371 - ARM repeat | 0 | Direct |
50447,54980,54980
50447 - Translation proteins
54980 - EF-G C-terminal domain-like
54980 - EF-G C-terminal domain-like | 0 | Direct |
54695,48452,48452
54695 - POZ domain
48452 - TPR-like
48452 - TPR-like | 0 | Direct |
81923,52540,52540
81923 - Double Clp-N motif
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
48452,48452,48452
48452 - TPR-like
48452 - TPR-like
48452 - TPR-like | 0 | Direct |
55973,55973,55973
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase
55973 - S-adenosylmethionine synthetase | 0 | Direct |
54585,52540,52540
54585 - Cdc48 domain 2-like
52540 - P-loop containing nucleoside triphosphate hydrolases
52540 - P-loop containing nucleoside triphosphate hydrolases | 0 | Direct |
88946,88659,88659
88946 - Sigma2 domain of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors
88659 - Sigma3 and sigma4 domains of RNA polymerase sigma factors | 0 | Direct |
53067,53067,100920
53067 - Actin-like ATPase domain
53067 - Actin-like ATPase domain
100920 - Heat shock protein 70kD (HSP70), peptide-binding domain | 0 | Direct |
47384,55874,52172
47384 - Homodimeric domain of signal transducing histidine kinase
55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
52172 - CheY-like | 0 | Direct |
51735,143548,55021
51735 - NAD(P)-binding Rossmann-fold domains
143548 - Serine metabolism enzymes domain
55021 - ACT-like | 0 | Direct |
51230,47005,52777
51230 - Single hybrid motif
47005 - Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
52777 - CoA-dependent acyltransferases | 0 | Direct |
49785,49785,51445
49785 - Galactose-binding domain-like
49785 - Galactose-binding domain-like
51445 - (Trans)glycosidases | 0 | Direct |
63411,63411,63411
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase
63411 - LuxS/MPP-like metallohydrolase | 0 | Direct |
53300,81995,81811
53300 - vWA-like
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24 | 0 | Direct |
55753,55753,55753
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins
55753 - Actin depolymerizing proteins | 0 | Direct |
46938,52087,101576
46938 - CRAL/TRIO N-terminal domain
52087 - CRAL/TRIO domain
101576 - Supernatant protein factor (SPF), C-terminal domain | 0 | Direct |
48452,48452,46565
48452 - TPR-like
48452 - TPR-like
46565 - Chaperone J-domain | 0 | Direct |
50447,54980,54211
50447 - Translation proteins
54980 - EF-G C-terminal domain-like
54211 - Ribosomal protein S5 domain 2-like | 0 | Direct |
81995,81811,82754
81995 - beta-sandwich domain of Sec23/24
81811 - Helical domain of Sec23/24
82754 - C-terminal, gelsolin-like domain of Sec23/24 | 0 | Direct |
81324,81324,47473
81324 - Voltage-gated potassium channels
81324 - Voltage-gated potassium channels
47473 - EF-hand | 0 | Direct |
90123,52540,90123
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region | 0.8609 | Inherited |
52540,90123,52540
52540 - P-loop containing nucleoside triphosphate hydrolases
90123 - ABC transporter transmembrane region
52540 - P-loop containing nucleoside triphosphate hydrolases | 0.8609 | Inherited |
LINKTO: Supra-domain2BO Download and Supra-domain2BO Algorithm
Plot distribution on species Tree Of Life (sTOL) for Superfamily and/or Family domains annotated by this AP term
 |
Plot tree as:
| |
Download Newick format tree:
|
( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domain
architecture data for all genomes in SUPERFAMILY. The PAUP
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
Plot distribution on species Tree Of Life (sTOL) for single supra-domains annotated by this AP term
|
Plot tree as:
| |
Download Newick format tree:
| |
Browsing in TREE OF LIFE:
|
( show help)
Trees by TreeVector
A presence/absence matrix is generated using protein domains and supradomains
for all genomes in SUPERFAMILY. The RAxML
software is used to produce a single, large tree topology using
heuristic parsimony methods. Genome combinations, or specific clades, can be displayed as
if individual trees had been produced. However, this data is extracted from the single
large tree. This produces a higher quality topology than if the trees had been produced
on their own, and allows the trees to be displayed instantly.
|
|
> BO Hierarchy > portion of plant tissue
