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  Home > Genomes > Superfamily assignments for Entamoeba histolytica 1


Entamoeba histolytica 1 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Amoebozoa; Archamoebae; Entamoebidae; Entamoeba; Entamoeba histolytica

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 8306 total
4743 (57 %) with assignment
418 average length
41 % amino acid coverage
Domains: 6856 total
579 unique superfamilies
302 unique families
300 average length
11.8 average superfamily size
92 % formed by duplication
Domain combinations: 422 domain pairs
1413 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
655 587 78 10 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
385 373 78 3 SCOP 56112 Protein kinase-like (PK-like)
286 93 42 0 SCOP 57184 Growth factor receptor domain
257 229 54 7 SCOP 48371 ARM repeat
212 155 32 0 SCOP 52058 L domain-like
165 91 18 5 SCOP 53067 Actin-like ATPase domain
149 141 29 1 SCOP 50978 WD40 repeat-like
119 119 25 2 SCOP 48350 GTPase activation domain, GAP
118 107 47 1 SCOP 50729 PH domain-like
113 81 27 0 SCOP 54928 RNA-binding domain, RBD
99 75 25 1 SCOP 57850 RING/U-box
84 47 13 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
80 80 9 5 SCOP 54001 Cysteine proteinases
77 59 28 3 SCOP 50249 Nucleic acid-binding proteins
76 52 18 1 SCOP 48452 TPR-like
69 66 29 0 SCOP 48065 DBL homology domain (DH-domain)
68 68 5 2 SCOP 56300 Metallo-dependent phosphatases
66 54 16 1 SCOP 47473 EF-hand
64 51 12 2 SCOP 52833 Thioredoxin-like
61 61 7 0 SCOP 53474 alpha/beta-Hydrolases
49 45 21 1 SCOP 48403 Ankyrin repeat
48 48 16 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
46 46 15 6 SCOP 51735 NAD(P)-binding Rossmann-fold domains
46 41 10 0 SCOP 46689 Homeodomain-like
46 45 15 3 SCOP 51445 (Trans)glycosidases
46 46 9 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
45 45 5 6 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
45 45 7 1 SCOP 48366 Ras GEF
45 42 14 0 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
44 44 7 1 SCOP 81606 PP2C-like
44 18 10 1 SCOP 55753 Actin depolymerizing proteins
44 30 16 0 SCOP 50044 SH3-domain
43 42 14 1 SCOP 54236 Ubiquitin-like
42 28 14 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
42 39 14 0 SCOP 46785 "Winged helix" DNA-binding domain
40 40 7 3 SCOP 56784 HAD-like
37 26 17 0 SCOP 81296 E set domains
35 35 5 0 SCOP 103473 MFS general substrate transporter
35 35 17 1 SCOP 47576 Calponin-homology domain, CH-domain
33 21 10 0 SCOP 90123 ABC transporter transmembrane region
31 30 6 3 SCOP 56281 Metallo-hydrolase/oxidoreductase
30 30 7 1 SCOP 111347 Rap/Ran-GAP
29 29 5 0 SCOP 103657 BAR/IMD domain-like
29 29 12 1 SCOP 53300 vWA-like
28 22 12 0 SCOP 52047 RNI-like
28 17 10 0 SCOP 57667 beta-beta-alpha zinc fingers
27 26 14 4 SCOP 54211 Ribosomal protein S5 domain 2-like
27 27 12 0 SCOP 49899 Concanavalin A-like lectins/glucanases
26 26 6 0 SCOP 58038 SNARE fusion complex
26 26 4 1 SCOP 54495 UBC-like
25 23 12 3 SCOP 52374 Nucleotidylyl transferase
25 24 7 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
25 25 10 2 SCOP 50447 Translation proteins
25 16 8 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
24 24 7 0 SCOP 49879 SMAD/FHA domain
23 22 9 4 SCOP 53098 Ribonuclease H-like
23 23 7 1 SCOP 64356 SNARE-like
23 23 5 0 SCOP 48464 ENTH/VHS domain
23 14 10 0 SCOP 57889 Cysteine-rich domain
22 22 5 1 SCOP 50104 Translation proteins SH3-like domain
22 22 4 1 SCOP 47113 Histone-fold
22 13 7 0 SCOP 47954 Cyclin-like
21 21 13 1 SCOP 46565 Chaperone J-domain
21 21 7 0 SCOP 81665 Calcium ATPase, transmembrane domain M
21 17 10 0 SCOP 52113 BRCT domain
20 18 6 4 SCOP 53383 PLP-dependent transferases
20 20 3 2 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
19 19 2 0 SCOP 52218 Flavoproteins
19 19 6 1 SCOP 56801 Acetyl-CoA synthetase-like
19 18 10 0 SCOP 57903 FYVE/PHD zinc finger
18 18 5 2 SCOP 56219 DNase I-like
18 17 5 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
18 18 4 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
18 18 5 0 SCOP 81653 Calcium ATPase, transduction domain A
17 17 2 0 SCOP 57829 Zn-binding ribosomal proteins
17 16 3 1 SCOP 52096 ClpP/crotonase
17 17 10 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
17 17 4 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
16 16 3 1 SCOP 50182 Sm-like ribonucleoproteins
16 16 3 0 SCOP 55961 Bet v1-like
16 16 7 0 SCOP 57863 ArfGap/RecO-like zinc finger
16 13 11 0 SCOP 46934 UBA-like
15 15 4 1 SCOP 51161 Trimeric LpxA-like enzymes
15 15 4 2 SCOP 55315 L30e-like
14 14 5 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
14 14 11 1 SCOP 55681 Class II aaRS and biotin synthetases
14 14 3 0 SCOP 47095 HMG-box
14 14 5 0 SCOP 81383 F-box domain
14 14 5 0 SCOP 109993 VPS9 domain
13 12 2 1 SCOP 52317 Class I glutamine amidotransferase-like
13 12 5 1 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
13 13 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
13 13 2 0 SCOP 143113 NAP-like
13 6 6 0 SCOP 81901 HCP-like
13 13 4 1 SCOP 48592 GroEL equatorial domain-like
13 13 3 0 SCOP 81923 Double Clp-N motif
13 7 5 1 SCOP 54980 EF-G C-terminal domain-like
13 13 4 2 SCOP 52029 GroEL apical domain-like
13 10 7 0 SCOP 57756 Retrovirus zinc finger-like domains
13 13 4 0 SCOP 54849 GroEL-intermediate domain like
12 9 5 2 SCOP 51905 FAD/NAD(P)-binding domain
12 11 4 0 SCOP 49452 Starch-binding domain-like
12 11 7 0 SCOP 49348 Clathrin adaptor appendage domain
11 9 5 4 SCOP 51556 Metallo-dependent hydrolases
11 11 5 2 SCOP 53448 Nucleotide-diphospho-sugar transferases
11 6 4 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
11 11 3 1 SCOP 51283 dUTPase-like
11 11 2 1 SCOP 56796 Dehydroquinate synthase-like
11 11 3 1 SCOP 56672 DNA/RNA polymerases
11 11 8 0 SCOP 49785 Galactose-binding domain-like
11 10 4 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
11 11 5 3 SCOP 52467 DHS-like NAD/FAD-binding domain
11 6 2 0 SCOP 53901 Thiolase-like
11 9 6 0 SCOP 54160 Chromo domain-like
11 11 9 1 SCOP 81837 BEACH domain
10 10 4 1 SCOP 55120 Pseudouridine synthase
10 10 8 0 SCOP 54862 4Fe-4S ferredoxins
10 10 3 0 SCOP 53254 Phosphoglycerate mutase-like
10 10 4 0 SCOP 49764 HSP20-like chaperones
10 10 3 1 SCOP 56815 Sec1/munc18-like (SM) proteins
10 10 2 1 SCOP 55418 eIF4e-like
10 10 3 0 SCOP 52266 SGNH hydrolase
10 10 4 0 SCOP 52151 FabD/lysophospholipase-like
10 10 4 0 SCOP 54695 POZ domain
10 10 5 1 SCOP 88697 PUA domain-like
10 10 3 1 SCOP 75632 Cullin homology domain
9 9 4 1 SCOP 53187 Zn-dependent exopeptidases
9 9 3 0 SCOP 46579 Prefoldin
9 9 6 1 SCOP 56399 ADP-ribosylation
9 9 5 0 SCOP 81301 Nucleotidyltransferase
9 9 3 1 SCOP 48019 post-AAA+ oligomerization domain-like
9 3 1 1 SCOP 55973 S-adenosylmethionine synthetase
9 9 3 0 SCOP 52075 Outer arm dynein light chain 1
9 9 5 0 SCOP 81631 PAP/OAS1 substrate-binding domain
9 3 2 1 SCOP 53738 Phosphoglucomutase, first 3 domains
9 9 3 0 SCOP 74788 Cullin repeat-like
9 9 5 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
9 9 6 1 SCOP 48425 Sec7 domain
8 8 6 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
8 8 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
8 7 4 1 SCOP 56104 SAICAR synthase-like
8 8 6 1 SCOP 88723 PIN domain-like
8 8 5 0 SCOP 52954 Class II aaRS ABD-related
8 5 4 0 SCOP 56024 Phospholipase D/nuclease
8 2 2 0 SCOP 50199 Staphylococcal nuclease
8 4 2 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
8 8 4 0 SCOP 50370 Ricin B-like lectins
8 8 7 0 SCOP 81995 beta-sandwich domain of Sec23/24
8 5 5 0 SCOP 90229 CCCH zinc finger
8 8 6 0 SCOP 47370 Bromodomain
8 8 3 0 SCOP 50911 Mannose 6-phosphate receptor domain
8 8 2 1 SCOP 47862 Saposin
7 7 2 1 SCOP 53167 Purine and uridine phosphorylases
7 7 2 1 SCOP 53613 Ribokinase-like
7 7 1 0 SCOP 52080 Ribosomal proteins L15p and L18e
7 7 3 0 SCOP 51695 PLC-like phosphodiesterases
7 7 2 0 SCOP 55174 Alpha-L RNA-binding motif
7 7 3 0 SCOP 55811 Nudix
7 7 2 1 SCOP 54534 FKBP-like
7 4 4 0 SCOP 51126 Pectin lyase-like
7 7 5 0 SCOP 64268 PX domain
7 7 3 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
7 7 4 0 SCOP 144091 Rhomboid-like
7 7 4 0 SCOP 57783 Zinc beta-ribbon
7 7 5 2 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
7 7 4 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
7 7 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
7 7 2 1 SCOP 47661 t-snare proteins
7 7 5 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
7 7 4 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
7 7 6 0 SCOP 47050 VHP, Villin headpiece domain
7 7 6 0 SCOP 82919 Zn-finger domain of Sec23/24
6 6 5 2 SCOP 56059 Glutathione synthetase ATP-binding domain-like
6 6 1 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
6 6 4 1 SCOP 53137 Translational machinery components
6 6 2 0 SCOP 160369 Ribosomal protein L10-like
6 6 3 1 SCOP 52402 Adenine nucleotide alpha hydrolases-like
6 6 3 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
6 6 2 0 SCOP 109604 HD-domain/PDEase-like
6 5 3 0 SCOP 55469 FMN-dependent nitroreductase-like
6 4 4 0 SCOP 57997 Tropomyosin
6 6 4 0 SCOP 47819 HRDC-like
6 4 2 1 SCOP 69645 Arp2/3 complex subunits
6 6 5 0 SCOP 161111 Cation efflux protein transmembrane domain-like
6 6 4 0 SCOP 82171 DPP6 N-terminal domain-like
6 6 1 0 SCOP 55895 Ribonuclease Rh-like
6 6 2 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
6 5 4 0 SCOP 55979 DNA clamp
6 6 3 0 SCOP 51011 Glycosyl hydrolase domain
6 6 1 1 SCOP 101887 Apyrase
6 3 2 1 SCOP 55945 TATA-box binding protein-like
6 5 5 0 SCOP 158702 Sec63 N-terminal domain-like
6 6 1 1 SCOP 56204 Hect, E3 ligase catalytic domain
6 5 4 0 SCOP 117839 WWE domain
6 6 1 1 SCOP 81382 Skp1 dimerisation domain-like
6 6 1 1 SCOP 88802 Pre-PUA domain
6 2 2 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
5 5 5 1 SCOP 55920 Creatinase/aminopeptidase
5 5 2 2 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
5 5 3 1 SCOP 50129 GroES-like
5 5 2 0 SCOP 52161 Ribosomal protein L13
5 5 3 1 SCOP 51395 FMN-linked oxidoreductases
5 5 1 0 SCOP 55129 Ribosomal protein L30p/L7e
5 5 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
5 5 2 1 SCOP 50891 Cyclophilin-like
5 5 4 0 SCOP 54427 NTF2-like
5 5 1 1 SCOP 57798 Casein kinase II beta subunit
5 5 1 0 SCOP 55718 SCP-like
5 2 2 1 SCOP 63411 LuxS/MPP-like metallohydrolase
5 5 5 0 SCOP 69322 Tricorn protease domain 2
5 5 2 0 SCOP 82199 SET domain
5 5 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
5 5 2 0 SCOP 160443 SMR domain-like
5 3 2 0 SCOP 159034 Mib/herc2 domain-like
5 5 3 2 SCOP 52922 TK C-terminal domain-like
5 3 3 0 SCOP 90257 Myosin rod fragments
5 5 3 0 SCOP 48334 DNA repair protein MutS, domain III
5 5 1 1 SCOP 55307 Tubulin C-terminal domain-like
5 5 2 2 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
5 5 3 1 SCOP 54768 dsRNA-binding domain-like
5 5 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
5 5 1 1 SCOP 101152 Mob1/phocein
5 5 4 0 SCOP 109885 I/LWEQ domain
5 5 4 0 SCOP 51045 WW domain
5 5 1 0 SCOP 55666 Ribonuclease PH domain 2-like
4 4 2 3 SCOP 51569 Aldolase
4 2 1 0 SCOP 53271 PRTase-like
4 3 3 0 SCOP 53927 Cytidine deaminase-like
4 4 1 1 SCOP 47973 Ribosomal protein S7
4 4 1 1 SCOP 52166 Ribosomal protein L4
4 4 1 1 SCOP 55282 RL5-like
4 4 1 1 SCOP 53784 Phosphofructokinase
4 4 4 1 SCOP 100950 NagB/RpiA/CoA transferase-like
4 4 2 0 SCOP 47336 ACP-like
4 4 2 1 SCOP 53720 ALDH-like
4 4 3 0 SCOP 102114 Radical SAM enzymes
4 2 2 0 SCOP 56935 Porins
4 4 3 0 SCOP 50685 Barwin-like endoglucanases
4 4 4 1 SCOP 52949 Macro domain-like
4 4 3 0 SCOP 63829 Calcium-dependent phosphotriesterase
4 4 3 0 SCOP 53649 Alkaline phosphatase-like
4 4 2 1 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
4 4 2 1 SCOP 144000 Oxysterol-binding protein-like
4 4 2 1 SCOP 74650 Galactose mutarotase-like
4 4 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
4 4 1 0 SCOP 56317 Carbon-nitrogen hydrolase
4 4 3 1 SCOP 51182 RmlC-like cupins
4 4 1 0 SCOP 54909 Dimeric alpha+beta barrel
4 4 3 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
4 4 3 0 SCOP 46548 alpha-helical ferredoxin
4 4 1 0 SCOP 160374 RplX-like
4 4 2 0 SCOP 143865 CorA soluble domain-like
4 4 1 0 SCOP 116726 TrkA C-terminal domain-like
4 4 3 1 SCOP 53920 Fe-only hydrogenase
4 4 2 0 SCOP 49354 PapD-like
4 4 2 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
4 4 3 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
4 2 1 0 SCOP 56053 Ribosomal protein L6
4 4 2 0 SCOP 55550 SH2 domain
4 4 2 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
4 4 3 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
4 4 3 0 SCOP 158573 GINS helical bundle-like
4 3 3 0 SCOP 116846 MIT domain
4 4 2 0 SCOP 57959 Leucine zipper domain
4 4 2 0 SCOP 75553 Smc hinge domain
4 4 3 1 SCOP 81811 Helical domain of Sec23/24
3 3 2 0 SCOP 56808 Ribosomal protein L1
3 3 3 2 SCOP 53697 SIS domain
3 3 3 0 SCOP 54197 HIT-like
3 3 1 0 SCOP 54570 Ribosomal protein S19
3 3 1 0 SCOP 54843 Ribosomal protein L22
3 3 1 1 SCOP 54686 Ribosomal protein L16p/L10e
3 3 1 1 SCOP 50193 Ribosomal protein L14
3 3 1 1 SCOP 56047 Ribosomal protein S8
3 3 1 1 SCOP 103491 Preprotein translocase SecY subunit
3 3 2 0 SCOP 46946 S13-like H2TH domain
3 3 2 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
3 2 2 0 SCOP 81333 F1F0 ATP synthase subunit C
3 3 1 1 SCOP 48557 L-aspartase-like
3 3 3 0 SCOP 48150 DNA-glycosylase
3 3 3 1 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
3 3 1 1 SCOP 56655 Carbohydrate phosphatase
3 2 2 1 SCOP 55205 EPT/RTPC-like
3 3 1 0 SCOP 48576 Terpenoid synthases
3 3 2 0 SCOP 50985 RCC1/BLIP-II
3 3 1 0 SCOP 103506 Mitochondrial carrier
3 3 1 0 SCOP 52042 Ribosomal protein L32e
3 3 1 0 SCOP 50475 FMN-binding split barrel
3 3 1 0 SCOP 54575 Ribosomal protein L31e
3 3 1 1 SCOP 53774 Glutaminase/Asparaginase
3 3 1 1 SCOP 48439 Protein prenylyltransferase
3 3 2 0 SCOP 48208 Six-hairpin glycosidases
3 3 1 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
3 3 2 0 SCOP 88713 Glycoside hydrolase/deacetylase
3 3 1 0 SCOP 55770 Profilin (actin-binding protein)
3 3 2 0 SCOP 55931 Glutamine synthetase/guanido kinase
3 2 2 0 SCOP 46955 Putative DNA-binding domain
3 3 1 0 SCOP 50692 ADC-like
3 3 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
3 3 2 0 SCOP 56747 Prim-pol domain
3 3 2 0 SCOP 117457 FumA C-terminal domain-like
3 3 2 0 SCOP 103196 Roadblock/LC7 domain
3 3 3 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
3 3 1 1 SCOP 89124 Nop domain
3 3 3 0 SCOP 55186 ThrRS/AlaRS common domain
3 3 1 0 SCOP 116820 Rps17e-like
3 3 2 1 SCOP 102462 Peptidyl-tRNA hydrolase II
3 3 3 0 SCOP 53092 Creatinase/prolidase N-terminal domain
3 3 2 0 SCOP 69318 Integrin alpha N-terminal domain
3 3 3 0 SCOP 101898 NHL repeat
3 3 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
3 3 2 1 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
3 3 2 0 SCOP 51971 Nucleotide-binding domain
3 3 2 0 SCOP 160059 PriA/YqbF domain
3 3 3 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
3 3 1 1 SCOP 56327 LDH C-terminal domain-like
3 3 2 0 SCOP 144232 HIT/MYND zinc finger-like
3 3 1 0 SCOP 47933 ERP29 C domain-like
3 3 2 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
3 3 2 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
3 3 1 0 SCOP 81271 TGS-like
3 3 1 1 SCOP 48445 14-3-3 protein
3 3 2 0 SCOP 101690 PAZ domain
3 3 2 0 SCOP 48097 Regulator of G-protein signaling, RGS
3 3 2 0 SCOP 109905 Surp module (SWAP domain)
3 3 2 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
3 3 1 0 SCOP 110942 HSP90 C-terminal domain
3 3 2 0 SCOP 49590 PHL pollen allergen
3 3 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
3 3 1 0 SCOP 47912 Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
3 3 2 0 SCOP 47031 Second domain of FERM
3 3 2 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
3 3 2 0 SCOP 140383 BSD domain-like
3 3 1 1 SCOP 54585 Cdc48 domain 2-like
2 2 2 0 SCOP 81338 Aquaporin-like
2 2 2 1 SCOP 52141 Uracil-DNA glycosylase-like
2 2 1 1 SCOP 51366 Ribulose-phoshate binding barrel
2 2 1 0 SCOP 54999 Ribosomal protein S10
2 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
2 2 2 1 SCOP 75217 alpha/beta knot
2 2 2 0 SCOP 52980 Restriction endonuclease-like
2 2 1 0 SCOP 47060 S15/NS1 RNA-binding domain
2 2 2 1 SCOP 51713 tRNA-guanine transglycosylase
2 2 2 1 SCOP 50715 Ribosomal protein L25-like
2 2 1 1 SCOP 52313 Ribosomal protein S2
2 2 2 0 SCOP 101908 Putative isomerase YbhE
2 2 2 2 SCOP 51419 PLP-binding barrel
2 2 1 0 SCOP 48140 Ribosomal protein L19 (L19e)
2 2 1 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
2 2 1 0 SCOP 103456 Preprotein translocase SecE subunit
2 2 2 0 SCOP 140718 Mediator hinge subcomplex-like
2 2 1 0 SCOP 50630 Acid proteases
2 2 2 0 SCOP 55144 LigT-like
2 2 2 0 SCOP 89895 FYSH domain
2 2 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
2 2 1 0 SCOP 48662 Ribosomal protein L39e
2 2 1 2 SCOP 52972 ITPase-like
2 2 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
2 2 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
2 2 2 0 SCOP 55159 eIF1-like
2 2 1 0 SCOP 143447 AMMECR1-like
2 2 2 2 SCOP 52768 Arginase/deacetylase
2 2 1 0 SCOP 52788 Phosphotyrosine protein phosphatases I
2 2 1 0 SCOP 54631 CBS-domain pair
2 2 2 0 SCOP 102712 JAB1/MPN domain
2 2 2 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
2 2 2 0 SCOP 51230 Single hybrid motif
2 2 1 0 SCOP 89550 PHP domain-like
2 2 2 0 SCOP 55154 CYTH-like phosphatases
2 2 1 0 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 1 0 SCOP 81340 Clc chloride channel
2 2 2 0 SCOP 53822 Periplasmic binding protein-like I
2 2 1 1 SCOP 103365 Hypothetical protein PH1602
2 2 1 0 SCOP 158634 RPA2825-like
2 2 2 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
2 2 2 0 SCOP 102588 LmbE-like
2 2 1 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
2 2 2 0 SCOP 100939 SPOC domain-like
2 2 1 0 SCOP 56726 DNA topoisomerase IV, alpha subunit
2 2 1 0 SCOP 46950 Double-stranded DNA-binding domain
2 2 1 0 SCOP 160350 Rnp2-like
2 2 1 0 SCOP 54984 eEF-1beta-like
2 2 1 0 SCOP 143437 THUMP domain-like
2 2 2 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
2 2 1 1 SCOP 103032 Hypothetical protein YwqG
2 2 1 1 SCOP 102645 CoaB-like
2 2 1 0 SCOP 117281 Kelch motif
2 2 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
2 2 2 0 SCOP 118116 DNA mismatch repair protein MutL
2 2 1 0 SCOP 141066 ICP-like
2 1 1 1 SCOP 52210 Succinyl-CoA synthetase domains
2 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
2 1 1 0 SCOP 46966 Spectrin repeat
2 2 2 0 SCOP 160148 CPE0013-like
2 2 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
2 2 2 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
2 2 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
2 2 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
2 2 2 0 SCOP 47794 Rad51 N-terminal domain-like
2 2 1 1 SCOP 54373 FAD-linked reductases, C-terminal domain
2 2 2 0 SCOP 63748 Tudor/PWWP/MBT
2 2 1 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
2 2 2 0 SCOP 57845 B-box zinc-binding domain
2 2 1 0 SCOP 63570 PABC (PABP) domain
2 2 2 0 SCOP 47769 SAM/Pointed domain
2 2 1 1 SCOP 55455 SRF-like
2 2 1 0 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
2 2 1 0 SCOP 63491 BAG domain
2 2 2 0 SCOP 47454 A DNA-binding domain in eukaryotic transcription factors
2 2 2 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
2 2 2 0 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 0 SCOP 160527 V-type ATPase subunit E-like
2 2 1 0 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
2 1 1 0 SCOP 81698 FF domain
2 2 2 1 SCOP 50989 Clathrin heavy-chain terminal domain
2 2 2 0 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
2 2 2 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
2 2 1 0 SCOP 140586 Dcp2 domain-like
2 2 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
2 2 2 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 1 SCOP 53790 Tetrapyrrole methylase
1 1 1 0 SCOP 142433 CinA-like
1 1 1 0 SCOP 64182 DHH phosphoesterases
1 1 1 0 SCOP 47240 Ferritin-like
1 1 1 0 SCOP 110324 Ribosomal L27 protein-like
1 1 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 0 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 0 SCOP 53633 Carbamate kinase-like
1 1 1 1 SCOP 51316 Mss4-like
1 1 1 1 SCOP 55821 YrdC/RibB
1 1 1 0 SCOP 54285 MoaD/ThiS
1 1 1 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
1 1 1 0 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 1 SCOP 55298 YjgF-like
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 69500 DTD-like
1 1 1 1 SCOP 53590 Nucleoside hydrolase
1 1 1 0 SCOP 54648 DLC
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 63393 RNA polymerase subunits
1 1 1 0 SCOP 144210 Nop10-like SnoRNP
1 1 1 0 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 1 0 SCOP 56019 The spindle assembly checkpoint protein mad2
1 1 1 0 SCOP 51306 LexA/Signal peptidase
1 1 1 0 SCOP 54919 Nucleoside diphosphate kinase, NDK
1 1 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 53056 beta-carbonic anhydrase, cab
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
1 1 1 0 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 1 SCOP 55909 Pentein
1 1 1 1 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 101546 ASF1-like
1 1 1 0 SCOP 101478 ADP-ribosylglycohydrolase
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 0 SCOP 81324 Voltage-gated potassium channels
1 1 1 0 SCOP 50494 Trypsin-like serine proteases
1 1 1 1 SCOP 118196 YaeB-like
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 0 SCOP 47413 lambda repressor-like DNA-binding domains
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 54447 ssDNA-binding transcriptional regulator domain
1 1 1 0 SCOP 143990 YbiA-like
1 1 1 0 SCOP 50800 PK beta-barrel domain-like
1 1 1 0 SCOP 69065 RNase III domain-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
1 1 1 0 SCOP 55826 YbaK/ProRS associated domain
1 1 1 1 SCOP 110581 Indigoidine synthase A-like
1 1 1 1 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
1 1 1 1 SCOP 56821 Prismane protein-like
1 1 1 0 SCOP 57802 Rubredoxin-like
1 1 1 1 SCOP 110738 Glycerate kinase I
1 1 1 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
1 1 1 0 SCOP 159659 Cgl1923-like
1 1 1 0 SCOP 69786 YggU-like
1 1 1 1 SCOP 51604 Enolase C-terminal domain-like
1 1 1 0 SCOP 47781 RuvA domain 2-like
1 1 1 0 SCOP 140736 Rv1873-like
1 1 1 0 SCOP 74784 Translin
1 1 1 1 SCOP 56574 Serpins
1 1 1 0 SCOP 69819 MTH1598-like
1 1 1 1 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 0 SCOP 69695 SRP19
1 1 1 0 SCOP 52777 CoA-dependent acyltransferases
1 1 1 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
1 1 1 0 SCOP 46589 tRNA-binding arm
1 1 1 0 SCOP 158832 Tex N-terminal region-like
1 1 1 0 SCOP 50156 PDZ domain-like
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 0 SCOP 142823 ComB-like
1 1 1 0 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 1 SCOP 102110 (2r)-phospho-3-sulfolactate synthase ComA
1 1 1 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
1 1 1 0 SCOP 142921 WGR domain-like
1 1 1 1 SCOP 56719 Type II DNA topoisomerase
1 1 1 0 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 0 SCOP 52440 PreATP-grasp domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
1 1 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 0 SCOP 50621 Alanine racemase C-terminal domain-like
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 141086 Agglutinin HPA-like
1 1 1 1 SCOP 54826 Enolase N-terminal domain-like
1 1 1 0 SCOP 55060 GHMP Kinase, C-terminal domain
1 1 1 0 SCOP 68906 SAP domain
1 1 1 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
1 1 1 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
1 1 1 1 SCOP 55637 Cell cycle regulatory proteins
1 1 1 1 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
1 1 1 0 SCOP 48431 Lipovitellin-phosvitin complex, superhelical domain
1 1 1 0 SCOP 90250 Troponin coil-coiled subunits
1 1 1 0 SCOP 118310 AN1-like Zinc finger
1 1 1 0 SCOP 101852 Bacterial fluorinating enzyme, C-terminal domain
1 1 1 0 SCOP 159283 Guanosine diphospho-D-mannose pyrophosphorylase/mannose-6-phosphate isomerase linker domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 144284 Sec2 N-terminal region
1 1 1 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
1 1 1 0 SCOP 47446 Signal peptide-binding domain
1 1 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
1 1 1 0 SCOP 82708 R3H domain
1 1 1 0 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 102522 Bacterial fluorinating enzyme, N-terminal domain
1 1 1 0 SCOP 116742 eIF2alpha middle domain-like
1 1 1 1 SCOP 89817 Mago nashi protein
1 1 1 0 SCOP 54277 CAD & PB1 domains
1 1 1 0 SCOP 52087 CRAL/TRIO domain
1 1 1 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
1 1 1 0 SCOP 47895 Transducin (alpha subunit), insertion domain
1 1 1 1 SCOP 82109 MIR domain
1 1 1 0 SCOP 47220 alpha-catenin/vinculin-like
1 1 1 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 0 SCOP 49599 TRAF domain-like
1 1 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 1 0 SCOP 63707 Ganglioside M2 (gm2) activator
1 1 1 0 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
1 1 1 0 SCOP 143791 DUSP-like
1 1 1 0 SCOP 101233 PWI domain
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
1 1 1 0 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 1 SCOP 89942 eEF1-gamma domain
1 1 1 0 SCOP 140111 Endosomal sorting complex assembly domain
1 1 1 0 SCOP 143885 RGC domain-like
1 1 1 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
1 1 1 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
1 1 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
1 1 1 0 SCOP 54556 Chitinase insertion domain
1 1 1 0 SCOP 101391 Hsp90 co-chaperone CDC37
1 1 1 0 SCOP 46942 Elongation factor TFIIS domain 2
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 0 SCOP 89000 post-HMGL domain-like
1 1 1 0 SCOP 159042 Plus3-like
1 1 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
1 1 1 0 SCOP 82615 Polo-box domain
1 1 1 0 SCOP 102860 mRNA decapping enzyme DcpS N-terminal domain
1 1 1 1 SCOP 63887 P-domain of calnexin/calreticulin
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 0 SCOP 47587 Domain of poly(ADP-ribose) polymerase
1 1 1 0 SCOP 101238 XPC-binding domain
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 158230 PRP4-like

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The following superfamilies have one or more weak hits:

SCOP superfamily Head morphogenesis protein gp7
SCOP superfamily GCM domain
SCOP superfamily YajQ-like
SCOP superfamily Proguanylin
SCOP superfamily Collagen-binding domain
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily TorD-like
SCOP superfamily GAT-like domain
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors
SCOP superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region
SCOP superfamily GIY-YIG endonuclease
SCOP superfamily AlbA-like
SCOP superfamily Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
SCOP superfamily BRCA2 helical domain
SCOP superfamily RuBisCo LSMT C-terminal, substrate-binding domain
SCOP superfamily Crustacean CHH/MIH/GIH neurohormone
SCOP superfamily Pre-protein crosslinking domain of SecA
SCOP superfamily Plasmid maintenance system epsilon/zeta, antidote epsilon subunit
SCOP superfamily Nucleotidyltransferase substrate binding subunit/domain
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
SCOP superfamily Bacterial aa3 type cytochrome c oxidase subunit IV
SCOP superfamily Cytochrome c oxidase subunit II-like, transmembrane region
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily Transmembrane di-heme cytochromes
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Release factor
SCOP superfamily Putative transcriptional regulator TM1602, C-terminal domain
SCOP superfamily Hypothetical protein MTH1880
SCOP superfamily Rotavirus NSP2 fragment, C-terminal domain
SCOP superfamily Arabinanase/levansucrase/invertase
SCOP superfamily V-region of surface antigen I/II (SA I/II, PAC)
SCOP superfamily Lamin A/C globular tail domain
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Colicin E3 receptor domain
SCOP superfamily Ribosome binding protein Y (YfiA homologue)
SCOP superfamily Urease metallochaperone UreE, C-terminal domain
SCOP superfamily DsrC, the gamma subunit of dissimilatory sulfite reductase
SCOP superfamily DNA-binding C-terminal domain of the transcription factor MotA
SCOP superfamily Cell wall binding repeat
SCOP superfamily Phage fibre proteins
SCOP superfamily Phage tail proteins
SCOP superfamily Nucleoplasmin-like core domain
SCOP superfamily Glutamyl tRNA-reductase dimerization domain
SCOP superfamily PEP carboxykinase N-terminal domain
SCOP superfamily Phase 1 flagellin
SCOP superfamily CNF1/YfiH-like putative cysteine hydrolases
SCOP superfamily SirA-like
SCOP superfamily Prokaryotic ribosomal protein L17
SCOP superfamily Sortase
SCOP superfamily Cytolysin/lectin
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily PTS-regulatory domain, PRD
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Bacterial hemolysins
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Virus ectodomain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily Fibritin
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Rotavirus nonstructural proteins
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily XRCC4, C-terminal oligomerization domain
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Coiled-coil domain of nucleotide exchange factor GrpE
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Trimerization domain of TRAF
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Invertebrate chitin-binding proteins
SCOP superfamily Heparin-binding domain from vascular endothelial growth factor
SCOP superfamily LDL receptor-like module
SCOP superfamily EGF/Laminin
SCOP superfamily Viral glycoprotein, central and dimerisation domains
SCOP superfamily Perfringolysin
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Lipovitellin-phosvitin complex; beta-sheet shell regions
SCOP superfamily Light-harvesting complex subunits
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Colicin
SCOP superfamily Upper collar protein gp10 (connector protein)
SCOP superfamily Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
SCOP superfamily Acyl-CoA dehydrogenase NM domain-like
SCOP superfamily Replication terminator protein (Tus)
SCOP superfamily A heparin-binding domain
SCOP superfamily Ribosome inactivating proteins (RIP)
SCOP superfamily DNA breaking-rejoining enzymes
SCOP superfamily Nitrile hydratase alpha chain
SCOP superfamily PheT/TilS domain
SCOP superfamily Nitrite and sulphite reductase 4Fe-4S domain-like
SCOP superfamily DNA topoisomerase I domain
SCOP superfamily PR-1-like
SCOP superfamily CytB endotoxin-like
SCOP superfamily Tetrahydrobiopterin biosynthesis enzymes-like
SCOP superfamily Origin of replication-binding domain, RBD-like
SCOP superfamily Bactericidal permeability-increasing protein, BPI
SCOP superfamily GYF domain
SCOP superfamily GAD domain-like
SCOP superfamily RuBisCO, small subunit
SCOP superfamily Ribosome recycling factor, RRF
SCOP superfamily Methyl-coenzyme M reductase subunits
SCOP superfamily ACT-like
SCOP superfamily Anticodon-binding domain of PheRS
SCOP superfamily Protease propeptides/inhibitors
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
SCOP superfamily DNA damage-inducible protein DinI
SCOP superfamily ClpS-like
SCOP superfamily Chalcone isomerase
SCOP superfamily DNA-binding domain of Mlu1-box binding protein MBP1
SCOP superfamily Mitochondrial glycoprotein MAM33-like
SCOP superfamily Tubby C-terminal domain-like
SCOP superfamily MHC antigen-recognition domain
SCOP superfamily Superantigen toxins, C-terminal domain
SCOP superfamily Staphylokinase/streptokinase
SCOP superfamily Prion-like
SCOP superfamily Lysozyme-like
SCOP superfamily "Helical backbone" metal receptor
SCOP superfamily Formate dehydrogenase/DMSO reductase, domains 1-3
SCOP superfamily Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
SCOP superfamily Isochorismatase-like hydrolases
SCOP superfamily Hypothetical protein MTH538
SCOP superfamily Toll/Interleukin receptor TIR domain
SCOP superfamily Caspase-like
SCOP superfamily Malate synthase G
SCOP superfamily Inosine monophosphate dehydrogenase (IMPDH)
SCOP superfamily alpha-D-mannose-specific plant lectins
SCOP superfamily Mannose-binding lectins
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily Nitrous oxide reductase, N-terminal domain
SCOP superfamily Galactose oxidase, central domain
SCOP superfamily TolB, C-terminal domain
SCOP superfamily Soluble quinoprotein glucose dehydrogenase
SCOP superfamily Sialidases
SCOP superfamily Rap30/74 interaction domains
SCOP superfamily beta-Barrel protease inhibitors
SCOP superfamily Avidin/streptavidin
SCOP superfamily Lipocalins
SCOP superfamily Actin-crosslinking proteins
SCOP superfamily Cytokine
SCOP superfamily TIMP-like
SCOP superfamily Bacterial enterotoxins
SCOP superfamily TNF-like
SCOP superfamily Rab geranylgeranyltransferase alpha-subunit, insert domain
SCOP superfamily Periplasmic chaperone C-domain
SCOP superfamily Cupredoxins
SCOP superfamily Cna protein B-type domain
SCOP superfamily p53-like transcription factors
SCOP superfamily Alpha-macroglobulin receptor domain
SCOP superfamily Superoxide reductase-like
SCOP superfamily Transglutaminase, two C-terminal domains
SCOP superfamily PKD domain
SCOP superfamily Fibronectin type III
SCOP superfamily Immunoglobulin
SCOP superfamily Multiheme cytochromes
SCOP superfamily Tetraspanin
SCOP superfamily Phospholipase A2, PLA2
SCOP superfamily Chorismate mutase II
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily gene 59 helicase assembly protein
SCOP superfamily Lipoxigenase
SCOP superfamily Ribosomal protein L7/12, oligomerisation (N-terminal) domain
SCOP superfamily TrpR-like
SCOP superfamily Seven-hairpin glycosidases
SCOP superfamily Cryptochrome/photolyase FAD-binding domain
SCOP superfamily An anticodon-binding domain of class I aminoacyl-tRNA synthetases
SCOP superfamily Heme-dependent peroxidases
SCOP superfamily Transcription factor STAT-4 N-domain
SCOP superfamily Di-copper centre-containing domain
SCOP superfamily Guanido kinase N-terminal domain
SCOP superfamily FliG
SCOP superfamily Annexin
SCOP superfamily Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
SCOP superfamily PAH2 domain
SCOP superfamily STAT
SCOP superfamily Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
SCOP superfamily GST C-terminal domain-like
SCOP superfamily Ribbon-helix-helix
SCOP superfamily SWIB/MDM2 domain
SCOP superfamily HLH, helix-loop-helix DNA-binding domain
SCOP superfamily ROP protein
SCOP superfamily Apolipoprotein
SCOP superfamily Mitochondrial import receptor subunit Tom20
SCOP superfamily Bacterial immunoglobulin/albumin-binding domains
SCOP superfamily Tubulin chaperone cofactor A
SCOP superfamily C-terminal effector domain of the bipartite response regulators
SCOP superfamily Cytochrome c
SCOP superfamily Globin-like
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily RILP dimerisation region
SCOP superfamily Zinc hairpin stack
SCOP superfamily CHY zinc finger-like
SCOP superfamily YfgJ-like
SCOP superfamily MetI-like
SCOP superfamily SNF-like
SCOP superfamily ATP synthase D chain-like
SCOP superfamily Photosystem II reaction center protein J, PsbJ
SCOP superfamily AF1531-like
SCOP superfamily YacF-like
SCOP superfamily Taf5 N-terminal domain-like
SCOP superfamily YehR-like
SCOP superfamily FLJ32549 C-terminal domain-like
SCOP superfamily BT0923-like
SCOP superfamily BLRF2-like
SCOP superfamily BH3703-like
SCOP superfamily FlaG-like
SCOP superfamily TBP-interacting protein-like
SCOP superfamily YkvR-like
SCOP superfamily BC4932-like
SCOP superfamily YopX-like
SCOP superfamily NEAT domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily Sama2622-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily RbcX-like
SCOP superfamily Jann4075-like
SCOP superfamily BH3980-like
SCOP superfamily FLJ32549 domain-like
SCOP superfamily Bacillus cereus metalloprotein-like
SCOP superfamily TM1646-like
SCOP superfamily occludin/ELL-like
SCOP superfamily E2F-DP heterodimerization region
SCOP superfamily Thermophilic metalloprotease-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily AF2331-like
SCOP superfamily L,D-transpeptidase pre-catalytic domain-like
SCOP superfamily YwmB-like
SCOP superfamily L28p-like
SCOP superfamily PHP14-like
SCOP superfamily GAS2 domain-like
SCOP superfamily TTP0101/SSO1404-like
SCOP superfamily TTHA1013/TTHA0281-like
SCOP superfamily YjbR-like
SCOP superfamily Pentapeptide repeat-like
SCOP superfamily Hcp1-like
SCOP superfamily L21p-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily RUN domain-like
SCOP superfamily PA2201 C-terminal domain-like
SCOP superfamily AF0941-like
SCOP superfamily IpaD-like
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily HP1531-like
SCOP superfamily VPS28 C-terminal domain-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily Calcyclin-binding protein-like
SCOP superfamily Expressed protein At2g23090/F21P24.15
SCOP superfamily Proton glutamate symport protein
SCOP superfamily Viral ssDNA binding protein
SCOP superfamily RalF, C-terminal domain
SCOP superfamily Nucleoporin domain
SCOP superfamily LEA14-like
SCOP superfamily DNA primase DnaG, C-terminal domain
SCOP superfamily YfbU-like
SCOP superfamily RNA-binding protein She2p
SCOP superfamily EspA/CesA-like
SCOP superfamily Hook domain
SCOP superfamily XseB-like
SCOP superfamily Fzo-like conserved region
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily OmpH-like
SCOP superfamily Mitochondrial ATP synthase coupling factor 6
SCOP superfamily Recombination protein RecR
SCOP superfamily Putative modulator of DNA gyrase, PmbA/TldD
SCOP superfamily Bacillus phage protein
SCOP superfamily Hypothetical protein yfbM
SCOP superfamily TTHA0583/YokD-like
SCOP superfamily Toprim domain
SCOP superfamily Hypothetical protein MG354
SCOP superfamily Triger factor/SurA peptide-binding domain-like
SCOP superfamily A middle domain of Talin 1
SCOP superfamily Hypothetical protein D-63
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily Nickel-containing superoxide dismutase, NiSOD
SCOP superfamily PhoU-like
SCOP superfamily Transcriptional repressor TraM
SCOP superfamily Proline/betaine transporter ProP, C-terminal cytoplasmic domain
SCOP superfamily Plexin repeat
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily 39 kda initiator binding protein, IBP39, C-terminal domains
SCOP superfamily Antivirulence factor
SCOP superfamily Suppressor of Fused, N-terminal domain
SCOP superfamily Sensory domain-like
SCOP superfamily Holliday junction resolvase RusA
SCOP superfamily Hypothetical protein TT1725
SCOP superfamily Stabilizer of iron transporter SufD
SCOP superfamily GyrA/ParC C-terminal domain-like
SCOP superfamily Replicase NSP9
SCOP superfamily Stathmin
SCOP superfamily Hypothetical protein ST1625
SCOP superfamily C-terminal domain of Ku80
SCOP superfamily YgfB-like
SCOP superfamily YcfC-like
SCOP superfamily HAND domain of the nucleosome remodeling ATPase ISWI
SCOP superfamily Flagellar export chaperone FliS
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily Chemosensory protein Csp2
SCOP superfamily IP3 receptor type 1 binding core, domain 2

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.