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  Home > Genomes > Superfamily assignments for The Salmonella enterica Pan-genome


The Salmonella enterica Pan-genome superfamily assignments

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 141831 total
93886 (66 %) with assignment
297 average length
65 % amino acid coverage
Domains: 136428 total
899 unique superfamilies
1123 unique families
290 average length
151.8 average superfamily size
99 % formed by duplication
Domain combinations: 614 domain pairs
1650 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
7827 6812 94 11 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
4016 3919 35 16 SCOP 46785 "Winged helix" DNA-binding domain
3243 3213 33 9 SCOP 51735 NAD(P)-binding Rossmann-fold domains
2825 2749 7 2 SCOP 103473 MFS general substrate transporter
2807 2807 12 1 SCOP 53850 Periplasmic binding protein-like II
2405 1944 32 2 SCOP 46689 Homeodomain-like
1678 1019 12 8 SCOP 53067 Actin-like ATPase domain
1479 1419 12 24 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
1407 1375 4 1 SCOP 161098 MetI-like
1349 982 24 5 SCOP 50249 Nucleic acid-binding proteins
1324 1295 9 5 SCOP 53383 PLP-dependent transferases
1319 1288 15 2 SCOP 52172 CheY-like
1295 1281 10 8 SCOP 52833 Thioredoxin-like
1118 1118 9 2 SCOP 46894 C-terminal effector domain of the bipartite response regulators
1074 1043 17 2 SCOP 54862 4Fe-4S ferredoxins
1068 1067 29 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
1024 1024 11 9 SCOP 56784 HAD-like
952 952 11 3 SCOP 47413 lambda repressor-like DNA-binding domains
949 945 24 5 SCOP 51905 FAD/NAD(P)-binding domain
943 943 2 1 SCOP 49401 Bacterial adhesins
886 481 10 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
880 880 11 3 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
878 546 7 1 SCOP 103481 Multidrug resistance efflux transporter EmrE
785 785 6 5 SCOP 53448 Nucleotide-diphospho-sugar transferases
781 781 5 6 SCOP 51569 Aldolase
756 756 11 8 SCOP 51182 RmlC-like cupins
752 721 11 5 SCOP 52402 Adenine nucleotide alpha hydrolases-like
743 631 6 5 SCOP 100950 NagB/RpiA/CoA transferase-like
728 728 5 3 SCOP 102114 Radical SAM enzymes
724 724 7 7 SCOP 53474 alpha/beta-Hydrolases
709 525 15 6 SCOP 55021 ACT-like
696 696 11 5 SCOP 53098 Ribonuclease H-like
694 694 16 1 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
686 611 21 8 SCOP 54211 Ribosomal protein S5 domain 2-like
676 676 4 4 SCOP 56935 Porins
675 675 6 1 SCOP 53822 Periplasmic binding protein-like I
664 571 7 7 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
660 564 12 2 SCOP 48452 TPR-like
636 339 16 3 SCOP 81296 E set domains
629 629 3 6 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
616 616 14 3 SCOP 52374 Nucleotidylyl transferase
611 611 9 6 SCOP 52317 Class I glutamine amidotransferase-like
599 172 3 1 SCOP 82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
590 590 14 5 SCOP 53955 Lysozyme-like
574 574 6 4 SCOP 53613 Ribokinase-like
569 569 16 5 SCOP 51445 (Trans)glycosidases
513 482 10 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
507 488 8 5 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
499 442 4 2 SCOP 50129 GroES-like
499 469 4 4 SCOP 55811 Nudix
494 494 11 3 SCOP 55681 Class II aaRS and biotin synthetases
464 464 9 3 SCOP 56601 beta-lactamase/transpeptidase-like
461 461 6 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
460 460 5 2 SCOP 50692 ADC-like
453 453 5 0 SCOP 141868 EAL domain-like
452 280 6 1 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
451 302 7 1 SCOP 111369 HlyD-like secretion proteins
450 450 7 10 SCOP 51556 Metallo-dependent hydrolases
447 416 2 5 SCOP 51366 Ribulose-phoshate binding barrel
442 442 6 2 SCOP 53720 ALDH-like
437 437 5 3 SCOP 53697 SIS domain
431 431 2 1 SCOP 48008 GntR ligand-binding domain-like
429 429 4 5 SCOP 52218 Flavoproteins
429 429 4 1 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
424 424 4 1 SCOP 49354 PapD-like
421 421 4 3 SCOP 50182 Sm-like ribonucleoproteins
413 413 3 1 SCOP 49584 Periplasmic chaperone C-domain
410 410 6 3 SCOP 53187 Zn-dependent exopeptidases
405 405 4 1 SCOP 46955 Putative DNA-binding domain
399 339 3 1 SCOP 159871 YdgH-like
393 393 6 3 SCOP 53649 Alkaline phosphatase-like
391 362 8 2 SCOP 52794 PTS system IIB component-like
386 355 8 2 SCOP 55781 GAF domain-like
379 347 7 3 SCOP 52096 ClpP/crotonase
376 376 7 1 SCOP 56349 DNA breaking-rejoining enzymes
367 336 5 4 SCOP 52440 PreATP-grasp domain
367 123 3 0 SCOP 53738 Phosphoglucomutase, first 3 domains
366 336 7 2 SCOP 54534 FKBP-like
363 332 4 5 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
362 362 3 6 SCOP 51161 Trimeric LpxA-like enzymes
357 327 10 0 SCOP 55785 PYP-like sensor domain (PAS domain)
351 290 6 1 SCOP 143414 CcmK-like
348 348 3 6 SCOP 54909 Dimeric alpha+beta barrel
344 172 3 1 SCOP 82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
342 311 8 1 SCOP 55804 Phoshotransferase/anion transport protein
341 341 1 1 SCOP 48498 Tetracyclin repressor-like, C-terminal domain
341 309 5 1 SCOP 90123 ABC transporter transmembrane region
338 307 10 2 SCOP 50447 Translation proteins
336 336 4 4 SCOP 55120 Pseudouridine synthase
335 335 1 1 SCOP 47616 GST C-terminal domain-like
333 181 2 2 SCOP 53901 Thiolase-like
332 332 4 1 SCOP 55073 Nucleotide cyclase
331 331 5 4 SCOP 52467 DHS-like NAD/FAD-binding domain
326 326 6 3 SCOP 56300 Metallo-dependent phosphatases
326 172 6 2 SCOP 56024 Phospholipase D/nuclease
325 325 2 1 SCOP 141729 FimD N-terminal domain-like
319 319 1 6 SCOP 51658 Xylose isomerase-like
319 319 4 1 SCOP 54826 Enolase N-terminal domain-like
317 317 3 4 SCOP 51197 Clavaminate synthase-like
316 172 8 1 SCOP 81901 HCP-like
315 315 3 2 SCOP 51604 Enolase C-terminal domain-like
308 308 4 2 SCOP 56796 Dehydroquinate synthase-like
305 305 3 5 SCOP 47240 Ferritin-like
302 302 3 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
298 267 9 3 SCOP 63380 Riboflavin synthase domain-like
293 293 7 2 SCOP 109604 HD-domain/PDEase-like
288 288 4 5 SCOP 56281 Metallo-hydrolase/oxidoreductase
288 288 4 0 SCOP 54631 CBS-domain pair
287 27 4 0 SCOP 101967 Adhesin YadA, collagen-binding domain
285 254 6 2 SCOP 81301 Nucleotidyltransferase
282 282 3 2 SCOP 56925 OMPA-like
282 282 10 1 SCOP 46548 alpha-helical ferredoxin
278 247 5 2 SCOP 52821 Rhodanese/Cell cycle control phosphatase
278 278 4 1 SCOP 51395 FMN-linked oxidoreductases
277 277 5 4 SCOP 75217 alpha/beta knot
277 277 9 6 SCOP 74650 Galactose mutarotase-like
276 276 3 1 SCOP 56801 Acetyl-CoA synthetase-like
276 153 3 0 SCOP 116726 TrkA C-terminal domain-like
275 273 4 2 SCOP 56112 Protein kinase-like (PK-like)
274 274 6 3 SCOP 53633 Carbamate kinase-like
274 246 2 1 SCOP 81345 ABC transporter involved in vitamin B12 uptake, BtuC
274 247 3 2 SCOP 50331 MOP-like
273 273 4 2 SCOP 54001 Cysteine proteinases
269 269 3 3 SCOP 55174 Alpha-L RNA-binding motif
267 180 6 1 SCOP 54980 EF-G C-terminal domain-like
263 263 3 3 SCOP 51998 PFL-like glycyl radical enzymes
262 201 7 1 SCOP 51230 Single hybrid motif
260 260 6 1 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
260 260 5 1 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
259 259 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
254 254 6 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
252 252 3 4 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
251 251 6 3 SCOP 56176 FAD-binding/transporter-associated domain-like
248 157 6 1 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
248 155 5 1 SCOP 50156 PDZ domain-like
247 247 3 2 SCOP 53271 PRTase-like
246 153 10 1 SCOP 57783 Zinc beta-ribbon
244 244 7 2 SCOP 47598 Ribbon-helix-helix
240 240 2 1 SCOP 81342 Transmembrane di-heme cytochromes
240 210 10 3 SCOP 47781 RuvA domain 2-like
239 239 4 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
239 239 4 4 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
238 238 3 1 SCOP 82689 Mechanosensitive channel protein MscS (YggB), C-terminal domain
236 236 6 2 SCOP 54292 2Fe-2S ferredoxin-like
236 236 7 2 SCOP 51011 Glycosyl hydrolase domain
229 229 6 9 SCOP 52980 Restriction endonuclease-like
224 224 7 2 SCOP 51419 PLP-binding barrel
221 221 5 2 SCOP 54373 FAD-linked reductases, C-terminal domain
219 93 4 2 SCOP 49503 Cupredoxins
217 93 3 2 SCOP 63411 LuxS/MPP-like metallohydrolase
214 214 3 2 SCOP 88713 Glycoside hydrolase/deacetylase
214 214 6 3 SCOP 88697 PUA domain-like
212 155 9 0 SCOP 63520 PTS-regulatory domain, PRD
207 207 2 1 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
206 206 2 2 SCOP 64288 Chorismate lyase-like
205 205 7 3 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
203 203 7 0 SCOP 81665 Calcium ATPase, transmembrane domain M
201 201 3 1 SCOP 89155 TorD-like
197 197 4 2 SCOP 52016 LeuD/IlvD-like
195 195 6 1 SCOP 46565 Chaperone J-domain
195 195 4 0 SCOP 141523 L,D-transpeptidase catalytic domain-like
192 192 6 1 SCOP 53062 PTS system fructose IIA component-like
191 191 5 2 SCOP 52922 TK C-terminal domain-like
189 189 6 1 SCOP 51261 Duplicated hybrid motif
188 188 1 2 SCOP 53254 Phosphoglycerate mutase-like
186 186 3 1 SCOP 53790 Tetrapyrrole methylase
186 186 4 2 SCOP 50475 FMN-binding split barrel
186 186 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
186 155 3 1 SCOP 56042 PurM C-terminal domain-like
186 155 3 1 SCOP 55326 PurM N-terminal domain-like
184 183 4 2 SCOP 56762 HydB/Nqo4-like
184 184 3 1 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
184 184 3 2 SCOP 53623 MurD-like peptide ligases, catalytic domain
183 152 4 3 SCOP 53927 Cytidine deaminase-like
183 183 5 3 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
181 181 1 1 SCOP 53639 AraD/HMP-PK domain-like
181 181 1 2 SCOP 53807 "Helical backbone" metal receptor
180 180 4 3 SCOP 48208 Six-hairpin glycosidases
178 178 7 0 SCOP 81653 Calcium ATPase, transduction domain A
172 139 20 1 SCOP 51126 Pectin lyase-like
172 143 3 1 SCOP 56529 FAH
168 84 1 0 SCOP 53681 Aspartate/glutamate racemase
168 115 4 1 SCOP 52210 Succinyl-CoA synthetase domains
163 163 6 2 SCOP 50621 Alanine racemase C-terminal domain-like
162 162 2 1 SCOP 53167 Purine and uridine phosphorylases
161 117 9 2 SCOP 69279 Phage tail proteins
160 160 5 3 SCOP 50104 Translation proteins SH3-like domain
160 160 1 3 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
159 159 2 1 SCOP 52499 Isochorismatase-like hydrolases
157 157 3 0 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
157 157 3 0 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
155 155 1 2 SCOP 48557 L-aspartase-like
155 124 6 1 SCOP 55008 HMA, heavy metal-associated domain
155 155 4 1 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
155 124 6 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
153 153 2 0 SCOP 56317 Carbon-nitrogen hydrolase
153 153 3 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
153 153 3 1 SCOP 48695 Multiheme cytochromes
152 152 3 0 SCOP 158472 HAMP domain-like
151 151 1 1 SCOP 118215 Proton glutamate symport protein
151 151 17 0 SCOP 103515 Autotransporter
151 120 3 0 SCOP 117892 Band 7/SPFH domain
151 151 3 1 SCOP 55904 Ornithine decarboxylase C-terminal domain
150 150 3 2 SCOP 56770 HydA/Nqo6-like
149 149 2 1 SCOP 56954 Outer membrane efflux proteins (OEP)
148 148 4 3 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
148 148 5 2 SCOP 56672 DNA/RNA polymerases
147 147 2 1 SCOP 103088 OmpA-like
146 146 4 1 SCOP 55594 HPr-like
146 115 3 2 SCOP 54197 HIT-like
144 144 4 1 SCOP 103190 Sensory domain-like
143 143 1 1 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
143 140 7 2 SCOP 51971 Nucleotide-binding domain
138 138 1 0 SCOP 143422 Transposase IS200-like
138 138 2 1 SCOP 54857 DNA damage-inducible protein DinI
136 70 3 1 SCOP 81273 H-NS histone-like proteins
134 134 2 1 SCOP 51215 Regulatory protein AraC
132 132 1 2 SCOP 56655 Carbohydrate phosphatase
130 130 2 1 SCOP 47729 IHF-like DNA-binding proteins
130 130 4 1 SCOP 55604 Glucose permease domain IIB
129 129 3 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
127 96 6 1 SCOP 52777 CoA-dependent acyltransferases
126 126 4 2 SCOP 51306 LexA/Signal peptidase
126 126 3 2 SCOP 48295 TrpR-like
125 94 3 0 SCOP 56214 4'-phosphopantetheinyl transferase
125 125 2 1 SCOP 89360 HesB-like domain
125 125 2 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
124 124 2 3 SCOP 82649 SufE/NifU
124 124 3 2 SCOP 50891 Cyclophilin-like
124 124 4 0 SCOP 54427 NTF2-like
124 124 1 1 SCOP 56322 ADC synthase
124 124 3 2 SCOP 53218 Molybdenum cofactor biosynthesis proteins
124 124 2 1 SCOP 55826 YbaK/ProRS associated domain
124 124 2 1 SCOP 101801 Surface presentation of antigens (SPOA)
124 124 1 1 SCOP 53163 HybD-like
124 124 2 1 SCOP 110997 Sporulation related repeat
124 93 5 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
124 124 3 2 SCOP 81271 TGS-like
123 123 3 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
123 123 3 4 SCOP 48150 DNA-glycosylase
123 123 1 1 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
123 123 4 1 SCOP 50494 Trypsin-like serine proteases
123 123 2 3 SCOP 54913 GlnB-like
123 123 1 1 SCOP 51246 Rudiment single hybrid motif
123 123 2 2 SCOP 48019 post-AAA+ oligomerization domain-like
123 123 4 1 SCOP 56719 Type II DNA topoisomerase
123 123 3 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
122 122 2 2 SCOP 55821 YrdC/RibB
122 122 5 1 SCOP 53328 Formyltransferase
122 122 4 2 SCOP 50800 PK beta-barrel domain-like
122 122 2 0 SCOP 55957 Phosphoglucomutase, C-terminal domain
122 61 2 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
121 121 4 1 SCOP 47336 ACP-like
121 121 1 1 SCOP 69635 Type III secretory system chaperone-like
121 121 2 1 SCOP 141452 Hcp1-like
121 121 2 1 SCOP 143548 Serine metabolism enzymes domain
121 121 1 0 SCOP 56519 Penicillin binding protein dimerisation domain
120 120 1 3 SCOP 52972 ITPase-like
119 119 1 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
118 118 1 2 SCOP 75169 DsrEFH-like
115 98 6 0 SCOP 103642 Sec-C motif
114 83 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
114 114 2 2 SCOP 55136 Probable bacterial effector-binding domain
114 114 2 1 SCOP 47170 Aspartate receptor, ligand-binding domain
113 113 3 1 SCOP 51206 cAMP-binding domain-like
113 113 3 1 SCOP 53732 Aconitase iron-sulfur domain
112 112 1 1 SCOP 64518 Phase 1 flagellin
110 110 3 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
109 109 2 1 SCOP 117457 FumA C-terminal domain-like
108 108 4 1 SCOP 52009 Phosphohistidine domain
105 105 3 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
103 103 5 1 SCOP 52266 SGNH hydrolase
102 102 1 1 SCOP 75620 Release factor
102 102 3 1 SCOP 51717 Dihydropteroate synthetase-like
102 102 1 1 SCOP 56219 DNase I-like
101 101 1 1 SCOP 110738 Glycerate kinase I
100 100 2 2 SCOP 55166 Hedgehog/DD-peptidase
98 98 6 1 SCOP 54523 Pili subunits
98 98 2 1 SCOP 52728 PTS IIb component
97 79 2 2 SCOP 55205 EPT/RTPC-like
95 95 3 1 SCOP 55920 Creatinase/aminopeptidase
95 95 1 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
95 64 3 0 SCOP 101386 all-alpha NTP pyrophosphatases
94 94 3 1 SCOP 52151 FabD/lysophospholipase-like
94 94 1 2 SCOP 56327 LDH C-terminal domain-like
93 93 2 1 SCOP 142433 CinA-like
93 93 2 1 SCOP 117143 Flagellar hook protein flgE
93 62 2 2 SCOP 51726 UROD/MetE-like
93 93 3 1 SCOP 88723 PIN domain-like
93 93 3 3 SCOP 55931 Glutamine synthetase/guanido kinase
93 93 3 1 SCOP 52954 Class II aaRS ABD-related
93 93 3 0 SCOP 50341 CheW-like
93 93 4 1 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
93 93 3 1 SCOP 48600 Chorismate mutase II
93 62 2 1 SCOP 81593 Nucleotidyltransferase substrate binding subunit/domain
93 93 2 0 SCOP 46589 tRNA-binding arm
93 31 1 1 SCOP 55979 DNA clamp
93 31 1 1 SCOP 55973 S-adenosylmethionine synthetase
93 93 1 2 SCOP 55060 GHMP Kinase, C-terminal domain
93 93 2 1 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
93 93 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
93 93 4 1 SCOP 142019 Nqo1 FMN-binding domain-like
92 92 1 1 SCOP 54285 MoaD/ThiS
92 61 4 0 SCOP 54106 LysM domain
92 92 4 2 SCOP 56037 PheT/TilS domain
92 92 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
91 91 1 2 SCOP 143800 L28p-like
91 91 1 1 SCOP 51316 Mss4-like
91 91 1 0 SCOP 49764 HSP20-like chaperones
91 91 3 1 SCOP 89550 PHP domain-like
91 91 3 3 SCOP 52335 Methylglyoxal synthase-like
91 91 1 1 SCOP 159127 HupF/HypC-like
91 91 4 1 SCOP 103501 Respiratory nitrate reductase 1 gamma chain
91 91 2 1 SCOP 160355 Bacterial polysaccharide co-polymerase-like
91 91 1 1 SCOP 51984 MurCD N-terminal domain
90 60 2 2 SCOP 47819 HRDC-like
90 90 2 1 SCOP 111364 Tsx-like channel
90 90 2 1 SCOP 160544 EscU C-terminal domain-like
90 90 4 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
90 90 4 1 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
89 89 3 2 SCOP 109998 Triger factor/SurA peptide-binding domain-like
89 89 3 0 SCOP 82771 GIY-YIG endonuclease
89 89 1 1 SCOP 81340 Clc chloride channel
89 89 1 0 SCOP 160719 gpW/gp25-like
89 89 2 1 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
88 88 1 1 SCOP 55298 YjgF-like
88 88 1 1 SCOP 69189 Penicillin-binding protein associated domain
87 87 1 1 SCOP 55469 FMN-dependent nitroreductase-like
87 87 1 1 SCOP 53774 Glutaminase/Asparaginase
87 87 2 1 SCOP 81923 Double Clp-N motif
86 86 2 1 SCOP 158442 DsbB-like
84 84 2 2 SCOP 46946 S13-like H2TH domain
84 84 1 0 SCOP 55890 Sporulation response regulatory protein Spo0B
84 84 2 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
82 82 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
78 78 3 0 SCOP 141571 Pentapeptide repeat-like
78 78 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
77 77 3 0 SCOP 55718 SCP-like
77 77 3 1 SCOP 47831 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
77 77 2 1 SCOP 89000 post-HMGL domain-like
75 75 3 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
75 75 3 1 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
74 74 2 2 SCOP 57829 Zn-binding ribosomal proteins
74 74 5 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
73 73 5 2 SCOP 52949 Macro domain-like
72 72 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
71 71 1 2 SCOP 50814 Lipocalins
69 69 3 0 SCOP 53300 vWA-like
68 68 1 1 SCOP 46575 DNA polymerase III theta subunit-like
67 67 3 1 SCOP 52058 L domain-like
67 67 1 1 SCOP 68989 Hemolysin expression modulating protein HHA
66 66 2 2 SCOP 53597 Dihydrofolate reductase-like
66 66 1 1 SCOP 101756 Hypothetical protein YgiW
66 22 1 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
66 66 2 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
66 66 2 1 SCOP 54423 DsbC/DsbG N-terminal domain-like
65 65 4 1 SCOP 53041 Resolvase-like
65 34 2 1 SCOP 89963 YajQ-like
65 65 1 1 SCOP 47823 lambda integrase-like, N-terminal domain
65 65 1 1 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
63 63 2 2 SCOP 52141 Uracil-DNA glycosylase-like
63 63 5 3 SCOP 54060 His-Me finger endonucleases
63 63 1 1 SCOP 53590 Nucleoside hydrolase
63 62 3 2 SCOP 54506 Diaminopimelate epimerase-like
63 63 1 1 SCOP 103025 Folate-binding domain
63 63 1 0 SCOP 143865 CorA soluble domain-like
63 63 2 1 SCOP 58042 Outer membrane lipoprotein
63 63 2 1 SCOP 47090 PGBD-like
63 63 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
63 63 1 1 SCOP 101790 Aminomethyltransferase beta-barrel domain
62 62 1 1 SCOP 51695 PLC-like phosphodiesterases
62 62 1 2 SCOP 82784 OsmC-like
62 62 2 1 SCOP 111283 Putative modulator of DNA gyrase, PmbA/TldD
62 62 1 1 SCOP 51283 dUTPase-like
62 62 2 2 SCOP 50715 Ribosomal protein L25-like
62 62 1 1 SCOP 64307 SirA-like
62 62 2 1 SCOP 48576 Terpenoid synthases
62 62 1 1 SCOP 48256 Citrate synthase
62 31 1 1 SCOP 46626 Cytochrome c
62 62 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
62 31 1 1 SCOP 48113 Heme-dependent peroxidases
62 62 1 1 SCOP 52768 Arginase/deacetylase
62 62 1 0 SCOP 143243 Nqo5-like
62 62 2 0 SCOP 52091 SpoIIaa-like
62 62 2 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
62 62 1 1 SCOP 161111 Cation efflux protein transmembrane domain-like
62 62 2 1 SCOP 54975 Acylphosphatase/BLUF domain-like
62 62 1 2 SCOP 89392 Prokaryotic lipoproteins and lipoprotein localization factors
62 62 2 1 SCOP 101327 YgfB-like
62 62 2 1 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
62 62 1 1 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
62 31 1 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
62 62 1 2 SCOP 74653 TolA/TonB C-terminal domain
62 62 1 1 SCOP 102546 RbsD-like
62 62 4 1 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
62 62 3 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
62 62 1 0 SCOP 160443 SMR domain-like
62 31 1 1 SCOP 48029 FliG
62 62 1 0 SCOP 140129 MxiH-like
62 62 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
62 62 2 2 SCOP 52968 B12-dependent dehydatase associated subunit
62 62 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
62 62 2 1 SCOP 55252 C-terminal domain of arginine repressor
62 62 1 1 SCOP 160240 Cation efflux protein cytoplasmic domain-like
62 62 1 1 SCOP 63418 MurE/MurF N-terminal domain
62 31 1 0 SCOP 47794 Rad51 N-terminal domain-like
62 62 1 1 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
62 62 2 0 SCOP 140591 Type III secretion system domain
62 62 1 1 SCOP 46557 GreA transcript cleavage protein, N-terminal domain
62 62 2 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
62 31 1 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
62 62 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
62 62 1 1 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
62 62 4 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
61 61 2 2 SCOP 48013 NusB-like
61 61 2 1 SCOP 81338 Aquaporin-like
61 61 1 1 SCOP 75625 YebC-like
61 61 2 1 SCOP 55315 L30e-like
61 61 2 0 SCOP 143011 RelE-like
61 61 2 1 SCOP 159894 YgaC/TfoX-N like
61 61 1 1 SCOP 53213 LigB-like
61 61 2 1 SCOP 51391 Thiamin phosphate synthase
61 61 2 1 SCOP 89028 Cobalamin adenosyltransferase-like
61 61 2 0 SCOP 57802 Rubredoxin-like
61 61 2 1 SCOP 50037 C-terminal domain of transcriptional repressors
61 61 1 1 SCOP 101874 YceI-like
61 61 3 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
61 61 2 1 SCOP 55186 ThrRS/AlaRS common domain
61 61 1 1 SCOP 52935 PK C-terminal domain-like
61 61 3 1 SCOP 143968 UbiD C-terminal domain-like
61 61 2 1 SCOP 101904 GyrA/ParC C-terminal domain-like
61 61 2 1 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
61 61 1 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
60 60 4 2 SCOP 51730 FAD-linked oxidoreductase
60 60 5 0 SCOP 110849 ParB/Sulfiredoxin
60 60 2 2 SCOP 55909 Pentein
60 60 1 2 SCOP 53800 Chelatase
60 60 1 1 SCOP 101960 Stabilizer of iron transporter SufD
60 60 1 1 SCOP 101478 ADP-ribosylglycohydrolase
60 60 1 0 SCOP 102405 MCP/YpsA-like
60 60 2 1 SCOP 50486 FMT C-terminal domain-like
60 60 1 1 SCOP 142906 YjbR-like
60 60 1 2 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
60 60 1 1 SCOP 141488 YdhA-like
60 60 2 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
60 60 1 2 SCOP 53743 FucI/AraA N-terminal and middle domains
60 60 1 1 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
60 60 1 2 SCOP 50443 FucI/AraA C-terminal domain-like
59 59 2 1 SCOP 109755 PhoU-like
59 59 1 1 SCOP 82657 BolA-like
59 59 2 1 SCOP 82093 Heme chaperone CcmE
59 59 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
59 45 2 1 SCOP 55666 Ribonuclease PH domain 2-like
58 58 2 2 SCOP 111331 NAD kinase/diacylglycerol kinase-like
57 57 1 1 SCOP 49777 PEBP-like
57 57 2 1 SCOP 160704 YehR-like
57 57 2 1 SCOP 159800 PrpR receptor domain-like
56 56 1 1 SCOP 111337 QueA-like
56 56 1 0 SCOP 52788 Phosphotyrosine protein phosphatases I
56 28 1 0 SCOP 117987 CRISPR-associated protein
55 55 2 2 SCOP 54736 ClpS-like
55 31 7 1 SCOP 116734 DNA methylase specificity domain
55 55 4 0 SCOP 140931 Fic-like
55 55 1 1 SCOP 142764 YgbK-like
54 54 1 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
54 54 1 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
53 53 2 1 SCOP 54768 dsRNA-binding domain-like
52 52 1 0 SCOP 50956 Thermostable phytase (3-phytase)
51 43 3 0 SCOP 69118 AhpD-like
50 50 1 1 SCOP 53137 Translational machinery components
50 50 1 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
50 50 2 1 SCOP 159133 EutN/CcmL-like
50 50 2 2 SCOP 143749 Phage tail protein-like
49 49 2 0 SCOP 142984 Nqo1 middle domain-like
48 48 1 1 SCOP 48024 N-terminal domain of DnaB helicase
48 24 1 1 SCOP 56053 Ribosomal protein L6
47 47 2 0 SCOP 89447 AbrB/MazE/MraZ-like
46 46 1 1 SCOP 49329 Cu,Zn superoxide dismutase-like
46 46 6 0 SCOP 88874 Receptor-binding domain of short tail fibre protein gp12
46 46 7 1 SCOP 69255 gp5 N-terminal domain-like
45 45 2 1 SCOP 50685 Barwin-like endoglucanases
45 45 1 1 SCOP 103365 Hypothetical protein PH1602
43 43 2 1 SCOP 81832 SopE-like GEF domain
42 42 3 1 SCOP 48657 FinO-like
41 41 4 0 SCOP 69304 Tricorn protease N-terminal domain
40 40 1 0 SCOP 57840 Ribosomal protein L36
40 40 2 0 SCOP 81324 Voltage-gated potassium channels
40 40 4 0 SCOP 69349 Phage fibre proteins
38 38 3 1 SCOP 89946 Hypothetical protein VC0424
38 38 1 1 SCOP 158668 MtlR-like
38 21 5 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
37 37 4 1 SCOP 56731 DNA primase core
37 37 1 0 SCOP 141530 PTSIIA/GutA-like
36 36 1 1 SCOP 53056 beta-carbonic anhydrase, cab
34 34 1 1 SCOP 144020 FdhE-like
34 34 2 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
34 34 1 1 SCOP 117782 YbjQ-like
34 34 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
34 34 1 1 SCOP 160930 FlhC-like
33 33 2 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
33 33 3 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
33 33 2 3 SCOP 51703 Cobalamin (vitamin B12)-dependent enzymes
33 33 1 1 SCOP 53092 Creatinase/prolidase N-terminal domain
33 33 3 0 SCOP 50370 Ricin B-like lectins
33 33 1 0 SCOP 141986 LD-carboxypeptidase A C-terminal domain-like
32 32 1 1 SCOP 64182 DHH phosphoesterases
32 32 2 1 SCOP 51713 tRNA-guanine transglycosylase
32 32 2 0 SCOP 158682 TerB-like
32 32 2 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
32 32 1 0 SCOP 109910 YgfY-like
32 32 1 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
32 32 2 1 SCOP 50939 Sialidases
32 32 2 1 SCOP 63592 Flagellar transcriptional activator FlhD
32 32 1 1 SCOP 48592 GroEL equatorial domain-like
32 32 1 1 SCOP 116960 YfbU-like
32 32 1 1 SCOP 56596 Replication terminator protein (Tus)
32 32 1 1 SCOP 52029 GroEL apical domain-like
32 32 1 1 SCOP 54849 GroEL-intermediate domain like
32 32 1 1 SCOP 101821 Aminopeptidase/glucanase lid domain
31 31 1 1 SCOP 74982 Small protein B (SmpB)
31 31 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
31 31 1 1 SCOP 82607 YbaB-like
31 31 1 1 SCOP 89919 Ribosome-binding factor A, RbfA
31 31 1 1 SCOP 53784 Phosphofructokinase
31 31 1 1 SCOP 110324 Ribosomal L27 protein-like
31 31 1 1 SCOP 53748 Phosphoglycerate kinase
31 31 1 1 SCOP 50324 Inorganic pyrophosphatase
31 31 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
31 31 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
31 31 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
31 31 1 1 SCOP 55194 Ribosome recycling factor, RRF
31 31 1 1 SCOP 54565 Ribosomal protein S16
31 31 1 1 SCOP 69765 IpsF-like
31 31 1 1 SCOP 54611 SecB-like
31 31 1 1 SCOP 103263 Chorismate synthase, AroC
31 31 1 0 SCOP 56276 S-adenosylmethionine decarboxylase
31 31 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
31 31 1 1 SCOP 101322 YcfC-like
31 31 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
31 31 1 0 SCOP 140566 FlgN-like
31 31 1 1 SCOP 52121 Lumazine synthase
31 31 1 0 SCOP 69721 DsrC, the gamma subunit of dissimilatory sulfite reductase
31 31 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
31 31 1 1 SCOP 117991 YbeD/HP0495-like
31 31 1 1 SCOP 111148 YggX-like
31 31 1 1 SCOP 55387 Frataxin/Nqo15-like
31 31 1 1 SCOP 56104 SAICAR synthase-like
31 31 1 0 SCOP 63829 Calcium-dependent phosphotriesterase
31 31 1 1 SCOP 69500 DTD-like
31 31 1 1 SCOP 102886 Coproporphyrinogen III oxidase
31 31 1 0 SCOP 55144 LigT-like
31 31 1 0 SCOP 51645 Malate synthase G
31 31 1 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
31 31 1 1 SCOP 82282 Homocysteine S-methyltransferase
31 31 1 1 SCOP 55159 eIF1-like
31 31 1 0 SCOP 55961 Bet v1-like
31 31 1 0 SCOP 69618 HemD-like
31 31 1 1 SCOP 103378 2-methylcitrate dehydratase PrpD
31 31 1 0 SCOP 63562 RPB6/omega subunit-like
31 31 1 0 SCOP 141734 HisI-like
31 31 1 1 SCOP 46458 Globin-like
31 31 1 1 SCOP 144091 Rhomboid-like
31 31 1 0 SCOP 161084 MAPEG domain-like
31 31 1 0 SCOP 111038 YjbQ-like
31 31 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
31 31 1 1 SCOP 53795 PEP carboxykinase-like
31 31 1 1 SCOP 64438 CNF1/YfiH-like putative cysteine hydrolases
31 31 1 1 SCOP 118196 YaeB-like
31 31 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
31 31 1 1 SCOP 111352 Ammonium transporter
31 31 1 1 SCOP 55331 Tautomerase/MIF
31 31 1 1 SCOP 82697 PurS-like
31 31 1 1 SCOP 50022 ISP domain
31 31 1 1 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
31 31 1 1 SCOP 101744 Rof/RNase P subunit-like
31 31 1 1 SCOP 64167 SurE-like
31 31 1 1 SCOP 110857 Gamma-glutamyl cyclotransferase-like
31 31 1 1 SCOP 63892 Pyridoxine 5'-phosphate synthase
31 31 1 1 SCOP 54690 Molybdopterin synthase subunit MoaE
31 31 1 0 SCOP 116842 XseB-like
31 31 2 1 SCOP 110399 ThiG-like
31 31 1 1 SCOP 111304 Recombination protein RecR
31 31 1 1 SCOP 117856 AF0104/ALDC/Ptd012-like
31 31 1 0 SCOP 50993 Peptidase/esterase 'gauge' domain
31 31 1 1 SCOP 69047 Hypothetical protein YjbJ
31 31 1 0 SCOP 117396 TM1631-like
31 31 1 0 SCOP 158997 Trm112p-like
31 31 1 0 SCOP 102829 Cell division protein ZapA-like
31 31 1 1 SCOP 143456 VC0467-like
31 31 1 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
31 31 1 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
31 31 1 1 SCOP 102400 DNA polymerase III chi subunit
31 31 1 0 SCOP 101307 YutG-like
31 31 1 0 SCOP 159664 CobE/GbiG C-terminal domain-like
31 31 1 1 SCOP 110069 ApaG-like
31 31 1 1 SCOP 143631 ApbE-like
31 31 1 1 SCOP 56821 Prismane protein-like
31 31 1 0 SCOP 75138 HprK N-terminal domain-like
31 31 1 1 SCOP 56507 Methionine synthase activation domain-like
31 31 1 0 SCOP 101116 Flagellar export chaperone FliS
31 31 1 1 SCOP 142338 CofD-like
31 31 1 1 SCOP 160950 YacF-like
31 31 1 1 SCOP 101738 SspB-like
31 31 1 1 SCOP 69786 YggU-like
31 31 1 1 SCOP 140319 IscX-like
31 31 2 1 SCOP 69917 OMPT-like
31 31 1 1 SCOP 75471 YhbY-like
31 31 1 0 SCOP 101498 Anti-sigma factor FlgM
31 31 1 0 SCOP 103039 CheC-like
31 31 1 0 SCOP 75005 Arabinanase/levansucrase/invertase
31 31 1 1 SCOP 47175 Cytochromes
31 31 1 1 SCOP 52738 Methylesterase CheB, C-terminal domain
31 31 1 1 SCOP 158710 PSPTO4464-like
31 31 1 1 SCOP 89562 RraA-like
31 31 1 1 SCOP 75708 Chemotaxis phosphatase CheZ
31 31 1 0 SCOP 159672 CbiG N-terminal domain-like
31 31 1 1 SCOP 52038 Barstar-related
31 31 1 0 SCOP 160582 MbtH-like
31 31 1 0 SCOP 143437 THUMP domain-like
31 31 1 1 SCOP 63867 MoeA C-terminal domain-like
31 31 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
31 31 1 0 SCOP 118001 YehU-like
31 31 1 0 SCOP 160272 Shew3726-like
31 31 1 1 SCOP 161187 YfgJ-like
31 31 1 1 SCOP 159270 YmcC-like
31 31 1 0 SCOP 46973 Enzyme IIa from lactose specific PTS, IIa-lac
31 31 1 1 SCOP 49772 Ecotin, trypsin inhibitor
31 31 1 0 SCOP 82114 Riboflavin kinase-like
31 31 2 1 SCOP 82057 Prokaryotic SH3-related domain
31 31 1 1 SCOP 141255 YccV-like
31 31 1 1 SCOP 118352 HSP33 redox switch-like
31 31 1 1 SCOP 56931 Outer membrane phospholipase A (OMPLA)
31 31 1 1 SCOP 118116 DNA mismatch repair protein MutL
31 31 1 1 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
31 31 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
31 31 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
31 31 1 1 SCOP 48334 DNA repair protein MutS, domain III
31 31 2 1 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
31 31 1 0 SCOP 141673 MOSC N-terminal domain-like
31 31 1 1 SCOP 57884 Ada DNA repair protein, N-terminal domain (N-Ada 10)
31 31 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
31 31 1 0 SCOP 116927 EspA/CesA-like
31 31 1 1 SCOP 109747 Glycogen synthesis protein GlgS
31 31 1 0 SCOP 68912 Rho N-terminal domain-like
31 31 1 0 SCOP 47979 Iron-dependent repressor protein, dimerization domain
31 31 1 1 SCOP 47148 Diol dehydratase, gamma subunit
31 31 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
31 31 1 1 SCOP 57825 Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
31 31 1 0 SCOP 57863 ArfGap/RecO-like zinc finger
31 31 1 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
31 31 1 1 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
31 31 1 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
31 31 1 0 SCOP 141322 NfeD domain-like
31 31 1 1 SCOP 160964 MalF N-terminal region-like
31 31 1 1 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
31 31 1 1 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
31 31 1 0 SCOP 46934 UBA-like
31 31 1 0 SCOP 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain
31 31 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
31 31 1 1 SCOP 63882 MoeA N-terminal region -like
31 31 1 0 SCOP 52113 BRCT domain
31 31 1 0 SCOP 74942 YhbC-like, C-terminal domain
31 31 1 1 SCOP 89069 N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
31 31 1 1 SCOP 48435 Bacterial muramidases
31 31 1 0 SCOP 75420 YhbC-like, N-terminal domain
31 31 1 1 SCOP 54752 RecA protein, C-terminal domain
31 31 1 1 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
31 31 1 0 SCOP 140490 Nqo1C-terminal domain-like
31 31 2 1 SCOP 54680 Pyrimidine nucleoside phosphorylase C-terminal domain
31 31 1 1 SCOP 47446 Signal peptide-binding domain
31 31 1 1 SCOP 64397 Hsp33 domain
31 31 1 0 SCOP 54991 Anticodon-binding domain of PheRS
31 31 1 1 SCOP 55271 DNA repair protein MutS, domain I
31 31 1 1 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
31 31 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
31 31 1 1 SCOP 143724 PHP14-like
31 31 1 1 SCOP 54368 Glutamine synthetase, N-terminal domain
31 31 4 0 SCOP 47454 A DNA-binding domain in eukaryotic transcription factors
31 31 1 1 SCOP 55261 GAD domain-like
31 31 1 1 SCOP 47757 Chemotaxis receptor methyltransferase CheR, N-terminal domain
31 31 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
31 31 2 1 SCOP 110942 HSP90 C-terminal domain
31 31 1 1 SCOP 75615 Siroheme synthase middle domains-like
31 31 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
31 31 2 1 SCOP 51064 Head domain of nucleotide exchange factor GrpE
31 31 1 1 SCOP 74778 Aconitase B, N-terminal domain
31 31 1 1 SCOP 64383 Cell-division protein ZipA, C-terminal domain
31 31 1 1 SCOP 47644 Methionine synthase domain
31 31 1 0 SCOP 46929 DNA helicase RuvA subunit, C-terminal domain
31 31 1 0 SCOP 160467 PH0987 N-terminal domain-like
31 31 1 1 SCOP 54893 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
31 31 1 0 SCOP 69705 Transcription factor NusA, N-terminal domain
31 31 1 1 SCOP 53150 DNA repair protein MutS, domain II
31 31 1 1 SCOP 140356 PPK N-terminal domain-like
31 31 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
31 31 1 1 SCOP 55052 CheY-binding domain of CheA
31 31 2 0 SCOP 103661 Proline/betaine transporter ProP, C-terminal cytoplasmic domain
31 31 1 1 SCOP 143856 DeoB insert domain-like
31 31 1 1 SCOP 109736 FGAM synthase PurL, linker domain
31 31 1 1 SCOP 160996 HI0933 insert domain-like
31 31 1 1 SCOP 140570 MukF C-terminal domain-like
31 31 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
31 31 1 1 SCOP 140746 SipA N-terminal domain-like
31 31 1 1 SCOP 101312 Invasion protein A (SipA) , C-terminal actin binding domain
30 30 1 1 SCOP 56420 Peptide deformylase
30 30 1 1 SCOP 47060 S15/NS1 RNA-binding domain
30 30 1 1 SCOP 142695 RibA-like
30 30 1 1 SCOP 143744 GlcG-like
30 30 1 1 SCOP 56634 Heme-dependent catalase-like
30 30 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
30 30 1 1 SCOP 142754 NadA-like
30 30 1 0 SCOP 55154 CYTH-like phosphatases
30 30 1 0 SCOP 81330 Gated mechanosensitive channel
30 30 1 0 SCOP 159594 XCC0632-like
30 30 2 1 SCOP 53323 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
30 30 1 1 SCOP 111384 OmpH-like
30 30 2 0 SCOP 103247 TT1751-like
30 30 1 1 SCOP 74863 Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
30 30 1 0 SCOP 50346 PRC-barrel domain
30 30 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
30 30 1 1 SCOP 160191 YcgL-like
30 30 1 1 SCOP 158832 Tex N-terminal region-like
30 30 1 1 SCOP 158651 YejL-like
30 30 1 1 SCOP 158452 YqcC-like
30 30 1 1 SCOP 109635 DnaK suppressor protein DksA, alpha-hairpin domain
30 30 1 1 SCOP 111342 CbiD-like
30 30 1 1 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
30 30 1 1 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
30 30 1 1 SCOP 55307 Tubulin C-terminal domain-like
30 30 1 1 SCOP 103063 Hypothetical protein YoaG
30 30 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
30 30 1 1 SCOP 55945 TATA-box binding protein-like
30 30 1 0 SCOP 75516 Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
30 30 2 1 SCOP 82808 Replication modulator SeqA, C-terminal DNA-binding domain
30 30 1 1 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
30 30 1 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
30 30 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
30 30 1 0 SCOP 116878 TrmE connector domain
30 30 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
30 30 1 1 SCOP 117023 DNA primase DnaG, C-terminal domain
30 30 1 1 SCOP 82829 MesJ substrate recognition domain-like
29 29 1 1 SCOP 46992 Ribosomal protein S20
29 29 1 1 SCOP 55229 Cell division protein MinE topological specificity domain
29 29 1 1 SCOP 117130 CsrA-like
29 29 1 0 SCOP 64153 YjeF N-terminal domain-like
29 29 1 0 SCOP 51679 Bacterial luciferase-like
29 29 1 1 SCOP 52733 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
29 29 1 0 SCOP 69065 RNase III domain-like
29 29 1 1 SCOP 110395 CutC-like
29 29 1 1 SCOP 102220 DNA polymerase III psi subunit
29 29 1 0 SCOP 63848 Cell-division inhibitor MinC, C-terminal domain
29 29 1 1 SCOP 140376 ChaB-like
29 29 3 1 SCOP 81935 N-terminal domain of bifunctional PutA protein
29 29 1 1 SCOP 81336 F1F0 ATP synthase subunit A
29 29 1 0 SCOP 160419 YdfO-like
29 29 1 1 SCOP 140990 FtsH protease domain-like
29 29 1 1 SCOP 52964 TolB, N-terminal domain
29 29 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
29 29 1 0 SCOP 49299 PKD domain
29 29 1 0 SCOP 81597 Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor
29 29 1 1 SCOP 141259 CarD-like
29 29 1 1 SCOP 102735 Trigger factor ribosome-binding domain
29 29 1 1 SCOP 81886 Helical scaffold and wing domains of SecA
29 29 1 1 SCOP 143517 TRCF domain-like
29 29 1 1 SCOP 81767 Pre-protein crosslinking domain of SecA
29 29 1 1 SCOP 82317 Swiveling domain of dehydratase reactivase alpha subunit
28 28 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
28 28 1 0 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
28 28 1 1 SCOP 63965 Precorrin-8X methylmutase CbiC/CobH
28 28 3 0 SCOP 102712 JAB1/MPN domain
28 28 1 0 SCOP 141371 PilZ domain-like
28 28 1 0 SCOP 55895 Ribonuclease Rh-like
28 28 1 1 SCOP 46906 Ribosomal protein L11, C-terminal domain
28 28 2 0 SCOP 49464 Carboxypeptidase regulatory domain-like
28 28 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
28 28 1 1 SCOP 117125 Putative glucosidase YicI, C-terminal domain
27 27 1 1 SCOP 54999 Ribosomal protein S10
27 27 2 0 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
27 27 1 1 SCOP 52313 Ribosomal protein S2
27 27 4 1 SCOP 52799 (Phosphotyrosine protein) phosphatases II
27 27 1 1 SCOP 111326 Urocanase
27 27 2 0 SCOP 49265 Fibronectin type III
27 27 4 1 SCOP 56568 Non-globular alpha+beta subunits of globular proteins
27 27 4 1 SCOP 47233 Bacterial GAP domain
26 26 1 1 SCOP 56808 Ribosomal protein L1
26 26 1 1 SCOP 141091 L21p-like
26 26 1 1 SCOP 54995 Ribosomal protein S6
26 26 1 1 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
26 26 1 0 SCOP 51055 Carbohydrate binding domain
26 26 1 0 SCOP 54556 Chitinase insertion domain
25 25 1 1 SCOP 46911 Ribosomal protein S18
25 25 1 1 SCOP 74731 Ribosomal protein L20
25 25 1 0 SCOP 160369 Ribosomal protein L10-like
25 25 1 1 SCOP 81333 F1F0 ATP synthase subunit C
25 25 1 1 SCOP 52161 Ribosomal protein L13
25 25 2 1 SCOP 55257 RBP11-like subunits of RNA polymerase
25 25 2 0 SCOP 55724 Mog1p/PsbP-like
25 24 3 0 SCOP 117281 Kelch motif
25 25 2 1 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
25 25 1 1 SCOP 55658 L9 N-domain-like
25 25 1 1 SCOP 55653 Ribosomal protein L9 C-domain
25 25 2 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
24 24 1 1 SCOP 47973 Ribosomal protein S7
24 24 1 1 SCOP 52166 Ribosomal protein L4
24 24 1 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
24 24 1 1 SCOP 54686 Ribosomal protein L16p/L10e
24 24 1 1 SCOP 50193 Ribosomal protein L14
24 24 1 1 SCOP 55282 RL5-like
24 24 1 1 SCOP 56047 Ribosomal protein S8
24 24 1 1 SCOP 52080 Ribosomal proteins L15p and L18e
24 24 1 0 SCOP 103491 Preprotein translocase SecY subunit
24 24 1 1 SCOP 143034 L35p-like
24 24 1 1 SCOP 55129 Ribosomal protein L30p/L7e
24 24 2 1 SCOP 55200 Translation initiation factor IF3, C-terminal domain
24 24 1 0 SCOP 144059 ImpE-like
24 24 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
23 23 1 1 SCOP 54570 Ribosomal protein S19
23 23 1 1 SCOP 46561 Ribosomal protein L29 (L29p)
23 23 1 0 SCOP 52047 RNI-like
23 23 1 1 SCOP 143081 BB1717-like
23 23 2 0 SCOP 82171 DPP6 N-terminal domain-like
23 23 1 0 SCOP 103032 Hypothetical protein YwqG
23 23 1 1 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
22 22 1 1 SCOP 54843 Ribosomal protein L22
22 22 1 0 SCOP 143120 YefM-like
22 22 1 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
22 22 1 1 SCOP 140670 YoaC-like
22 22 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
21 21 2 0 SCOP 109709 KorB DNA-binding domain-like
20 20 2 0 SCOP 56399 ADP-ribosylation
20 20 1 2 SCOP 50118 Cell growth inhibitor/plasmid maintenance toxic component
20 20 2 1 SCOP 140693 IpaD-like
19 19 1 1 SCOP 47345 Colicin E immunity proteins
18 18 1 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
18 18 1 0 SCOP 140864 TROVE domain-like
18 18 1 0 SCOP 52913 RNA 3'-terminal phosphate cyclase, RPTC, insert domain
16 16 2 1 SCOP 54786 YcfA/nrd intein domain
16 16 1 0 SCOP 64210 Head-to-tail joining protein W, gpW
16 16 1 1 SCOP 51274 Head decoration protein D (gpD, major capsid protein D)
15 15 1 0 SCOP 54171 DNA-binding domain
14 14 1 1 SCOP 103084 Holliday junction resolvase RusA
14 14 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
14 14 1 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
14 14 1 1 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
14 14 1 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
13 13 1 1 SCOP 102645 CoaB-like
12 12 1 1 SCOP 103370 NinB
12 12 2 1 SCOP 56563 Major capsid protein gp5
12 12 4 1 SCOP 51327 Head-binding domain of phage P22 tailspike protein
11 11 1 1 SCOP 58100 Bacterial hemolysins
11 11 1 1 SCOP 102816 Putative dsDNA mimic
10 10 1 1 SCOP 143737 YeeU-like
9 8 5 2 SCOP 49785 Galactose-binding domain-like
9 9 1 0 SCOP 50203 Bacterial enterotoxins
8 8 2 1 SCOP 48371 ARM repeat
8 8 3 0 SCOP 57997 Tropomyosin
8 8 1 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
6 6 1 0 SCOP 50199 Staphylococcal nuclease
6 6 2 0 SCOP 52200 Toll/Interleukin receptor TIR domain
6 6 1 0 SCOP 50789 Herpes virus serine proteinase, assemblin
6 6 2 1 SCOP 55464 Origin of replication-binding domain, RBD-like
6 6 1 1 SCOP 140581 TraM-like
5 5 1 0 SCOP 101082 Typo IV secretion system protein TraC
5 5 1 1 SCOP 160207 NMB0488-like
5 5 1 0 SCOP 48726 Immunoglobulin
5 4 2 1 SCOP 49303 beta-Galactosidase/glucuronidase domain
5 5 2 1 SCOP 58096 Colicin Ia, N-terminal domain
4 4 1 1 SCOP 160940 Api92-like
4 4 1 0 SCOP 52743 Subtilisin-like
4 4 2 0 SCOP 54616 DNA-binding domain of Mlu1-box binding protein MBP1
4 4 1 1 SCOP 101936 DNA-binding pseudobarrel domain
3 3 1 0 SCOP 81606 PP2C-like
3 3 2 0 SCOP 143100 TTHA1013/TTHA0281-like
3 3 1 0 SCOP 82199 SET domain
3 3 1 0 SCOP 160631 SMI1/KNR4-like
3 3 1 1 SCOP 56837 Colicin
3 3 1 0 SCOP 58059 Tetramerization domain of the Mnt repressor
2 2 1 0 SCOP 48403 Ankyrin repeat
2 2 2 0 SCOP 49899 Concanavalin A-like lectins/glucanases
2 2 1 0 SCOP 110710 TTHA0583/YokD-like
2 2 1 1 SCOP 160935 VPA0735-like
2 2 1 0 SCOP 161266 Gam-like
2 2 1 1 SCOP 47380 ROP protein
1 1 1 1 SCOP 51069 Carbonic anhydrase
1 1 1 0 SCOP 160246 EspE N-terminal domain-like
1 1 1 1 SCOP 82544 GckA/TtuD-like
1 1 1 1 SCOP 159709 PhnH-like
1 1 1 0 SCOP 69318 Integrin alpha N-terminal domain
1 1 1 0 SCOP 48619 Phospholipase A2, PLA2
1 1 1 1 SCOP 48230 Chondroitin AC/alginate lyase
1 1 1 0 SCOP 159941 MM3350-like
1 1 1 1 SCOP 160387 NosL/MerB-like
1 1 1 0 SCOP 90257 Myosin rod fragments
1 1 1 0 SCOP 56436 C-type lectin-like
1 1 1 1 SCOP 63840 Ribonuclease domain of colicin E3
1 1 1 0 SCOP 69369 Cloacin translocation domain
1 1 1 0 SCOP 141493 Allene oxide cyclase-like
1 1 1 0 SCOP 54511 GFP-like
1 1 1 1 SCOP 49863 Hyaluronate lyase-like, C-terminal domain

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily Fucose-specific lectin
SCOP superfamily Collagen-binding domain
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily Nop domain
SCOP superfamily GAT-like domain
SCOP superfamily N-terminal, heterodimerisation domain of RBP7 (RpoE)
SCOP superfamily Families 57/38 glycoside transferase middle domain
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily MIR domain
SCOP superfamily BAH domain
SCOP superfamily beta-sandwich domain of Sec23/24
SCOP superfamily Tp47 lipoprotein, middle and C-terminal domains
SCOP superfamily C-terminal domain of DFF45/ICAD (DFF-C domain)
SCOP superfamily Plasmid maintenance system epsilon/zeta, antidote epsilon subunit
SCOP superfamily a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Bacterial aa3 type cytochrome c oxidase subunit IV
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
SCOP superfamily Family A G protein-coupled receptor-like
SCOP superfamily Adenylylcyclase toxin (the edema factor)
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily Smc hinge domain
SCOP superfamily Monomethylamine methyltransferase MtmB
SCOP superfamily 3-carboxy-cis,cis-mucoante lactonizing enzyme
SCOP superfamily Cap-Gly domain
SCOP superfamily Major surface antigen p30, SAG1
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Colicin E3 receptor domain
SCOP superfamily Eea1 homodimerisation domain
SCOP superfamily Pheromone ER-23
SCOP superfamily Membrane penetration protein mu1
SCOP superfamily Thymidylate synthase-complementing protein Thy1
SCOP superfamily DNA-binding C-terminal domain of the transcription factor MotA
SCOP superfamily Cell wall binding repeat
SCOP superfamily C-terminal domain of adenylylcyclase associated protein
SCOP superfamily Integrin domains
SCOP superfamily Arp2/3 complex 21 kDa subunit ARPC3
SCOP superfamily FAT domain of focal adhesion kinase
SCOP superfamily YopH tyrosine phosphatase N-terminal domain
SCOP superfamily YWTD domain
SCOP superfamily Ganglioside M2 (gm2) activator
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Frizzled cysteine-rich domain
SCOP superfamily RNA polymerase subunits
SCOP superfamily Apolipoprotein A-I
SCOP superfamily Virus ectodomain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily SNARE fusion complex
SCOP superfamily Multimerization domain of the phosphoprotein from sendai virus
SCOP superfamily Rotavirus nonstructural proteins
SCOP superfamily XRCC4, C-terminal oligomerization domain
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Inovirus (filamentous phage) major coat protein
SCOP superfamily Leucine zipper domain
SCOP superfamily FYVE/PHD zinc finger
SCOP superfamily Cysteine-rich domain
SCOP superfamily RING/U-box
SCOP superfamily B-box zinc-binding domain
SCOP superfamily beta-beta-alpha zinc fingers
SCOP superfamily Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
SCOP superfamily TNF receptor-like
SCOP superfamily Complement control module/SCR domain
SCOP superfamily LDL receptor-like module
SCOP superfamily Neurotoxin III (ATX III)
SCOP superfamily BPTI-like
SCOP superfamily Snake toxin-like
SCOP superfamily Bowman-Birk inhibitor, BBI
SCOP superfamily Growth factor receptor domain
SCOP superfamily Agouti-related protein
SCOP superfamily Viral glycoprotein, central and dimerisation domains
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Reovirus inner layer core protein p3
SCOP superfamily Upper collar protein gp10 (connector protein)
SCOP superfamily Sec1/munc18-like (SM) proteins
SCOP superfamily Prim-pol domain
SCOP superfamily Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
SCOP superfamily DNA topoisomerase IV, alpha subunit
SCOP superfamily Serpins
SCOP superfamily Baseplate structural protein gp11
SCOP superfamily gp120 core
SCOP superfamily SRCR-like
SCOP superfamily Ribosome inactivating proteins (RIP)
SCOP superfamily DmpA/ArgJ-like
SCOP superfamily The spindle assembly checkpoint protein mad2
SCOP superfamily Molybdenum cofactor-binding domain
SCOP superfamily Profilin (actin-binding protein)
SCOP superfamily Actin depolymerizing proteins
SCOP superfamily CytB endotoxin-like
SCOP superfamily Homing endonucleases
SCOP superfamily beta-N-acetylhexosaminidase-like domain
SCOP superfamily eIF4e-like
SCOP superfamily Bactericidal permeability-increasing protein, BPI
SCOP superfamily GYF domain
SCOP superfamily Formiminotransferase domain of formiminotransferase-cyclodeaminase.
SCOP superfamily Formylmethanofuran:tetrahydromethanopterin formyltransferase
SCOP superfamily Viral DNA-binding domain
SCOP superfamily Ribosomal protein L31e
SCOP superfamily Colicin E3 immunity protein
SCOP superfamily UBC-like
SCOP superfamily MHC antigen-recognition domain
SCOP superfamily Staphylokinase/streptokinase
SCOP superfamily CAD & PB1 domains
SCOP superfamily Ubiquitin-like
SCOP superfamily Chromo domain-like
SCOP superfamily Nitrogenase accessory factor-like
SCOP superfamily Caspase-like
SCOP superfamily CRAL/TRIO domain
SCOP superfamily Glycosyl hydrolases family 6, cellulases
SCOP superfamily RuBisCo, C-terminal domain
SCOP superfamily AFP III-like domain
SCOP superfamily TRAP-like
SCOP superfamily alpha-D-mannose-specific plant lectins
SCOP superfamily Clathrin heavy-chain terminal domain
SCOP superfamily Galactose oxidase, central domain
SCOP superfamily TolB, C-terminal domain
SCOP superfamily Mannose 6-phosphate receptor domain
SCOP superfamily D-aminopeptidase, middle and C-terminal domains
SCOP superfamily beta-Barrel protease inhibitors
SCOP superfamily Avidin/streptavidin
SCOP superfamily PH domain-like
SCOP superfamily Electron transport accessory proteins
SCOP superfamily Baculovirus p35 protein
SCOP superfamily Soluble secreted chemokine inhibitor, VCCI
SCOP superfamily SMAD/FHA domain
SCOP superfamily Calpain large subunit, middle domain (domain III)
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily Rab geranylgeranyltransferase alpha-subunit, insert domain
SCOP superfamily PHL pollen allergen
SCOP superfamily Cna protein B-type domain
SCOP superfamily Starch-binding domain-like
SCOP superfamily Alpha-macroglobulin receptor domain
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily Peridinin-chlorophyll protein
SCOP superfamily Lipoxigenase
SCOP superfamily ENTH/VHS domain
SCOP superfamily Protein prenylyltransferase
SCOP superfamily Lipovitellin-phosvitin complex, superhelical domain
SCOP superfamily Ras GEF
SCOP superfamily Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
SCOP superfamily Aldehyde ferredoxin oxidoreductase, C-terminal domains
SCOP superfamily Cyclin-like
SCOP superfamily ERP29 C domain-like
SCOP superfamily Ypt/Rab-GAP domain of gyp1p
SCOP superfamily Annexin
SCOP superfamily Protein HNS-dependent expression A; HdeA
SCOP superfamily Cytochrome c oxidase subunit h
SCOP superfamily C-terminal domain of B transposition protein
SCOP superfamily Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
SCOP superfamily Transferrin receptor-like dimerisation domain
SCOP superfamily t-snare proteins
SCOP superfamily Calponin-homology domain, CH-domain
SCOP superfamily EF-hand
SCOP superfamily HLH, helix-loop-helix DNA-binding domain
SCOP superfamily Retrovirus capsid dimerization domain-like
SCOP superfamily 4-helical cytokines
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily Histone-fold
SCOP superfamily Fertilization protein
SCOP superfamily T4 endonuclease V
SCOP superfamily Tubulin chaperone cofactor A
SCOP superfamily Smac/diablo
SCOP superfamily Spectrin repeat
SCOP superfamily Elongation factor TFIIS domain 2
SCOP superfamily CRAL/TRIO N-terminal domain
SCOP superfamily N-terminal Zn binding domain of HIV integrase
SCOP superfamily Prefoldin
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Zinc hairpin stack
SCOP superfamily T-antigen specific domain-like
SCOP superfamily E7 C-terminal domain-like
SCOP superfamily CHY zinc finger-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily SNF-like
SCOP superfamily ATP synthase D chain-like
SCOP superfamily ATP synthase B chain-like
SCOP superfamily PsbZ-like
SCOP superfamily Photosystem II reaction center protein K, PsbK
SCOP superfamily Photosystem II reaction center protein M, PsbM
SCOP superfamily PSTPO5379-like
SCOP superfamily Jann2411-like
SCOP superfamily BTG domain-like
SCOP superfamily SpoVG-like
SCOP superfamily V-type ATPase subunit E-like
SCOP superfamily BLRF2-like
SCOP superfamily NRDP1 C-terminal domain-like
SCOP superfamily CdCA1 repeat-like
SCOP superfamily Cgl1923-like
SCOP superfamily EreA/ChaN-like
SCOP superfamily PA1994-like
SCOP superfamily YopT-like
SCOP superfamily WSSV envelope protein-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily SMc04008-like
SCOP superfamily MG296-like
SCOP superfamily Sec63 N-terminal domain-like
SCOP superfamily Sama2622-like
SCOP superfamily ENT-like
SCOP superfamily GINS helical bundle-like
SCOP superfamily TAFH domain-like
SCOP superfamily BH2638-like
SCOP superfamily IVS-encoded protein-like
SCOP superfamily HP0062-like
SCOP superfamily YvfG-like
SCOP superfamily YnzC-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily HIT/MYND zinc finger-like
SCOP superfamily CSL zinc finger
SCOP superfamily Nop10-like SnoRNP
SCOP superfamily NOB1 zinc finger-like
SCOP superfamily Oxysterol-binding protein-like
SCOP superfamily DUSP-like
SCOP superfamily YktB/PF0168-like
SCOP superfamily MFPT repeat-like
SCOP superfamily RelB-like
SCOP superfamily Indolic compounds 2,3-dioxygenase-like
SCOP superfamily Pseudo ankyrin repeat-like
SCOP superfamily PA2201 C-terminal domain-like
SCOP superfamily Mediator hinge subcomplex-like
SCOP superfamily SP0561-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily EF2947-like
SCOP superfamily LemA-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily VPS28 C-terminal domain-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain
SCOP superfamily AN1-like Zinc finger
SCOP superfamily WRKY DNA-binding domain
SCOP superfamily Nucleoporin domain
SCOP superfamily Hypothetical protein PA1324
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily RNA-binding protein She2p
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily Rbstp2229 protein
SCOP superfamily Ligand-binding domain in the NO signalling and Golgi transport
SCOP superfamily Hypothetical protein yfbM
SCOP superfamily Toprim domain
SCOP superfamily Oligoxyloglucan reducing end-specific cellobiohydrolase
SCOP superfamily Glycolipid transfer protein, GLTP
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily DEK C-terminal domain
SCOP superfamily BAR/IMD domain-like
SCOP superfamily Plexin repeat
SCOP superfamily Chlorophyll a-b binding protein
SCOP superfamily Mitochondrial carrier
SCOP superfamily Virulence-associated V antigen
SCOP superfamily Roadblock/LC7 domain
SCOP superfamily Activator of Hsp90 ATPase, Aha1
SCOP superfamily Putative isomerase YbhE
SCOP superfamily NHL repeat
SCOP superfamily Apyrase
SCOP superfamily Bacterial fluorinating enzyme, C-terminal domain
SCOP superfamily Supernatant protein factor (SPF), C-terminal domain
SCOP superfamily DhaL-like
SCOP superfamily C-terminal domain of Ku80
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like
SCOP superfamily HAND domain of the nucleosome remodeling ATPase ISWI
SCOP superfamily Staphylocoagulase
SCOP superfamily Phosphoprotein XD domain
SCOP superfamily SPOC domain-like
SCOP superfamily IP3 receptor type 1 binding core, domain 2

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.