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Heliconius numata superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Holometabola; Amphiesmenoptera; Lepidoptera; Glossata; Neolepidoptera; Heteroneura; Ditrysia; Obtectomera; Papilionoidea; Nymphalidae; Heliconiinae; Heliconiini; Heliconius; Heliconius numata

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 12808 total
4846 (38 %) with assignment
137 average length
42 % amino acid coverage
Domains: 5606 total
787 unique superfamilies
501 unique families
150 average length
7.1 average superfamily size
86 % formed by duplication
Domain combinations: 303 domain pairs
1462 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
255 247 21 9 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
146 95 15 0 SCOP 57667 beta-beta-alpha zinc fingers
113 113 5 1 SCOP 50494 Trypsin-like serine proteases
110 109 17 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
106 89 13 5 SCOP 52833 Thioredoxin-like
104 104 5 1 SCOP 50978 WD40 repeat-like
104 63 15 0 SCOP 57625 Invertebrate chitin-binding proteins
97 96 8 8 SCOP 53474 alpha/beta-Hydrolases
87 79 16 1 SCOP 54928 RNA-binding domain, RBD
76 76 6 1 SCOP 56112 Protein kinase-like (PK-like)
72 46 12 3 SCOP 54236 Ubiquitin-like
70 68 7 9 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
70 70 7 7 SCOP 48371 ARM repeat
66 66 3 1 SCOP 48264 Cytochrome P450
64 64 3 0 SCOP 103473 MFS general substrate transporter
59 57 10 5 SCOP 51445 (Trans)glycosidases
54 53 14 4 SCOP 50249 Nucleic acid-binding proteins
54 50 18 5 SCOP 46785 "Winged helix" DNA-binding domain
50 48 6 2 SCOP 48452 TPR-like
49 47 10 2 SCOP 51905 FAD/NAD(P)-binding domain
47 47 3 1 SCOP 56574 Serpins
41 41 6 1 SCOP 50104 Translation proteins SH3-like domain
38 35 11 1 SCOP 57850 RING/U-box
35 27 8 1 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
35 35 3 4 SCOP 53098 Ribonuclease H-like
35 35 5 1 SCOP 47616 GST C-terminal domain-like
34 34 6 1 SCOP 47473 EF-hand
34 34 10 4 SCOP 81296 E set domains
33 26 7 2 SCOP 53067 Actin-like ATPase domain
33 33 2 4 SCOP 53383 PLP-dependent transferases
31 31 4 3 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
31 30 5 1 SCOP 55307 Tubulin C-terminal domain-like
30 28 6 7 SCOP 54001 Cysteine proteinases
29 28 2 0 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
29 29 2 1 SCOP 100910 Chemosensory protein Csp2
28 27 4 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
28 28 5 1 SCOP 52087 CRAL/TRIO domain
27 26 13 1 SCOP 52374 Nucleotidylyl transferase
27 22 7 2 SCOP 56436 C-type lectin-like
27 17 8 0 SCOP 48726 Immunoglobulin
26 26 12 2 SCOP 50447 Translation proteins
25 25 3 3 SCOP 54495 UBC-like
25 25 5 1 SCOP 52058 L domain-like
24 24 11 4 SCOP 54211 Ribosomal protein S5 domain 2-like
24 24 3 1 SCOP 50182 Sm-like ribonucleoproteins
23 23 2 1 SCOP 103506 Mitochondrial carrier
22 22 11 1 SCOP 55681 Class II aaRS and biotin synthetases
22 17 6 2 SCOP 55753 Actin depolymerizing proteins
22 22 11 1 SCOP 46565 Chaperone J-domain
22 22 5 1 SCOP 54373 FAD-linked reductases, C-terminal domain
21 21 4 0 SCOP 57829 Zn-binding ribosomal proteins
21 21 7 2 SCOP 55315 L30e-like
20 20 7 1 SCOP 54695 POZ domain
20 20 6 2 SCOP 50729 PH domain-like
19 19 6 3 SCOP 56300 Metallo-dependent phosphatases
19 17 6 1 SCOP 46689 Homeodomain-like
19 19 3 2 SCOP 47113 Histone-fold
19 17 8 3 SCOP 49899 Concanavalin A-like lectins/glucanases
19 19 2 1 SCOP 47576 Calponin-homology domain, CH-domain
19 10 4 0 SCOP 100895 Kazal-type serine protease inhibitors
18 18 5 5 SCOP 56784 HAD-like
18 18 4 1 SCOP 48403 Ankyrin repeat
18 18 4 1 SCOP 48592 GroEL equatorial domain-like
18 15 8 0 SCOP 50156 PDZ domain-like
18 12 5 2 SCOP 47954 Cyclin-like
17 17 2 2 SCOP 52096 ClpP/crotonase
17 17 3 1 SCOP 51197 Clavaminate synthase-like
16 16 6 4 SCOP 51556 Metallo-dependent hydrolases
16 16 2 3 SCOP 53254 Phosphoglycerate mutase-like
16 16 5 1 SCOP 49764 HSP20-like chaperones
16 16 5 3 SCOP 64356 SNARE-like
16 16 4 1 SCOP 50891 Cyclophilin-like
16 15 3 0 SCOP 57567 Serine protease inhibitors
15 15 3 4 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
15 15 1 1 SCOP 51430 NAD(P)-linked oxidoreductase
15 15 5 1 SCOP 54534 FKBP-like
15 15 3 1 SCOP 48113 Heme-dependent peroxidases
14 14 6 2 SCOP 53137 Translational machinery components
14 14 2 1 SCOP 48576 Terpenoid synthases
14 14 1 0 SCOP 48662 Ribosomal protein L39e
14 14 4 0 SCOP 46938 CRAL/TRIO N-terminal domain
14 9 7 0 SCOP 57196 EGF/Laminin
14 14 2 0 SCOP 47565 Insect pheromone/odorant-binding proteins
14 8 6 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
13 13 3 3 SCOP 100950 NagB/RpiA/CoA transferase-like
13 13 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
13 13 4 1 SCOP 55811 Nudix
13 13 2 1 SCOP 56801 Acetyl-CoA synthetase-like
13 13 5 4 SCOP 52467 DHS-like NAD/FAD-binding domain
13 13 2 1 SCOP 50814 Lipocalins
13 10 2 1 SCOP 53901 Thiolase-like
13 12 7 0 SCOP 46934 UBA-like
13 8 7 0 SCOP 51045 WW domain
13 12 5 1 SCOP 54556 Chitinase insertion domain
12 12 2 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
12 11 4 1 SCOP 50129 GroES-like
12 12 1 1 SCOP 53720 ALDH-like
12 12 4 2 SCOP 53187 Zn-dependent exopeptidases
12 12 4 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
12 11 3 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
12 9 5 0 SCOP 46966 Spectrin repeat
12 9 7 0 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
12 12 3 0 SCOP 63748 Tudor/PWWP/MBT
12 11 6 0 SCOP 57184 Growth factor receptor domain
12 9 6 0 SCOP 57424 LDL receptor-like module
11 11 2 3 SCOP 51569 Aldolase
11 11 3 1 SCOP 56808 Ribosomal protein L1
11 11 1 2 SCOP 47240 Ferritin-like
11 11 4 0 SCOP 55174 Alpha-L RNA-binding motif
11 11 5 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
11 9 3 1 SCOP 53850 Periplasmic binding protein-like II
11 11 4 0 SCOP 63829 Calcium-dependent phosphotriesterase
11 11 2 0 SCOP 46579 Prefoldin
11 10 4 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
11 11 4 1 SCOP 88713 Glycoside hydrolase/deacetylase
11 11 7 0 SCOP 52954 Class II aaRS ABD-related
11 9 5 1 SCOP 49503 Cupredoxins
11 11 7 0 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
11 11 5 1 SCOP 57903 FYVE/PHD zinc finger
10 10 3 1 SCOP 53448 Nucleotide-diphospho-sugar transferases
10 10 1 1 SCOP 75304 Amidase signature (AS) enzymes
10 10 2 0 SCOP 54570 Ribosomal protein S19
10 10 2 0 SCOP 52161 Ribosomal protein L13
10 10 1 2 SCOP 51316 Mss4-like
10 10 1 2 SCOP 53649 Alkaline phosphatase-like
10 9 4 0 SCOP 54427 NTF2-like
10 10 3 1 SCOP 49785 Galactose-binding domain-like
10 9 2 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
10 10 1 1 SCOP 103196 Roadblock/LC7 domain
10 10 3 0 SCOP 82199 SET domain
10 10 3 1 SCOP 54984 eEF-1beta-like
10 10 4 1 SCOP 52490 Tubulin nucleotide-binding domain-like
10 7 5 1 SCOP 54160 Chromo domain-like
10 9 5 0 SCOP 90229 CCCH zinc finger
10 10 1 1 SCOP 47874 Annexin
10 2 2 0 SCOP 57283 PMP inhibitors
9 9 2 0 SCOP 54843 Ribosomal protein L22
9 6 5 0 SCOP 47060 S15/NS1 RNA-binding domain
9 9 2 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
9 9 2 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
9 8 4 1 SCOP 58038 SNARE fusion complex
9 9 2 0 SCOP 47072 Cysteine alpha-hairpin motif
9 9 3 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
9 9 4 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
9 9 5 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
8 8 3 2 SCOP 53271 PRTase-like
8 8 4 2 SCOP 54197 HIT-like
8 8 3 1 SCOP 55920 Creatinase/aminopeptidase
8 8 5 1 SCOP 55120 Pseudouridine synthase
8 7 6 3 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
8 8 1 1 SCOP 56655 Carbohydrate phosphatase
8 8 3 0 SCOP 55129 Ribosomal protein L30p/L7e
8 8 1 0 SCOP 52042 Ribosomal protein L32e
8 8 3 0 SCOP 56317 Carbon-nitrogen hydrolase
8 8 1 1 SCOP 49329 Cu,Zn superoxide dismutase-like
8 8 5 0 SCOP 50044 SH3-domain
8 8 3 1 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
8 6 2 1 SCOP 63411 LuxS/MPP-like metallohydrolase
8 8 1 1 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
8 8 4 1 SCOP 89124 Nop domain
8 8 2 2 SCOP 52777 CoA-dependent acyltransferases
8 8 5 0 SCOP 52200 Toll/Interleukin receptor TIR domain
8 7 6 1 SCOP 54980 EF-G C-terminal domain-like
8 8 4 1 SCOP 48056 Di-copper centre-containing domain
8 8 7 0 SCOP 54768 dsRNA-binding domain-like
8 8 4 0 SCOP 52113 BRCT domain
8 5 3 1 SCOP 56053 Ribosomal protein L6
8 8 4 0 SCOP 48652 Tetraspanin
8 8 4 0 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
8 8 1 1 SCOP 56204 Hect, E3 ligase catalytic domain
8 8 3 0 SCOP 57959 Leucine zipper domain
8 8 3 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
8 8 3 0 SCOP 54849 GroEL-intermediate domain like
7 7 2 1 SCOP 56059 Glutathione synthetase ATP-binding domain-like
7 7 2 0 SCOP 54999 Ribosomal protein S10
7 7 3 1 SCOP 54686 Ribosomal protein L16p/L10e
7 7 1 1 SCOP 55282 RL5-like
7 7 2 0 SCOP 52080 Ribosomal proteins L15p and L18e
7 7 1 0 SCOP 103657 BAR/IMD domain-like
7 5 3 0 SCOP 81333 F1F0 ATP synthase subunit C
7 7 3 1 SCOP 47095 HMG-box
7 7 1 1 SCOP 144122 Tim10-like
7 7 1 0 SCOP 56672 DNA/RNA polymerases
7 7 2 0 SCOP 81321 Family A G protein-coupled receptor-like
7 7 1 1 SCOP 57997 Tropomyosin
7 7 6 1 SCOP 53300 vWA-like
7 6 5 0 SCOP 49879 SMAD/FHA domain
7 7 2 1 SCOP 56003 Molybdenum cofactor-binding domain
7 7 3 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
7 7 2 1 SCOP 52029 GroEL apical domain-like
7 6 3 1 SCOP 56327 LDH C-terminal domain-like
7 7 4 1 SCOP 57501 Cystine-knot cytokines
7 7 4 0 SCOP 47769 SAM/Pointed domain
7 6 6 0 SCOP 57756 Retrovirus zinc finger-like domains
7 7 4 0 SCOP 110942 HSP90 C-terminal domain
6 6 1 1 SCOP 50193 Ribosomal protein L14
6 6 1 1 SCOP 48557 L-aspartase-like
6 6 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
6 5 2 0 SCOP 52799 (Phosphotyrosine protein) phosphatases II
6 6 4 0 SCOP 52047 RNI-like
6 5 2 1 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
6 5 3 1 SCOP 57783 Zinc beta-ribbon
6 6 4 1 SCOP 51230 Single hybrid motif
6 6 2 1 SCOP 53955 Lysozyme-like
6 6 1 1 SCOP 56219 DNase I-like
6 6 4 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
6 6 3 0 SCOP 101898 NHL repeat
6 6 3 1 SCOP 63825 YWTD domain
6 6 2 0 SCOP 90257 Myosin rod fragments
6 6 1 0 SCOP 158745 LanC-like
6 6 3 1 SCOP 52210 Succinyl-CoA synthetase domains
6 4 3 1 SCOP 55945 TATA-box binding protein-like
6 6 5 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
6 6 3 1 SCOP 74788 Cullin repeat-like
6 5 4 1 SCOP 47370 Bromodomain
6 6 3 1 SCOP 49599 TRAF domain-like
6 6 3 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
6 5 4 0 SCOP 50911 Mannose 6-phosphate receptor domain
6 5 4 0 SCOP 47862 Saposin
6 6 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
6 6 3 0 SCOP 90148 DPY module
5 5 1 1 SCOP 52317 Class I glutamine amidotransferase-like
5 5 3 2 SCOP 53697 SIS domain
5 5 2 1 SCOP 56047 Ribosomal protein S8
5 5 4 1 SCOP 75217 alpha/beta knot
5 5 2 0 SCOP 51161 Trimeric LpxA-like enzymes
5 5 4 1 SCOP 54292 2Fe-2S ferredoxin-like
5 5 2 0 SCOP 102114 Radical SAM enzymes
5 5 3 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
5 5 3 1 SCOP 51395 FMN-linked oxidoreductases
5 5 1 0 SCOP 50985 RCC1/BLIP-II
5 5 2 0 SCOP 48140 Ribosomal protein L19 (L19e)
5 5 1 1 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
5 5 1 1 SCOP 56815 Sec1/munc18-like (SM) proteins
5 5 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
5 5 3 3 SCOP 51182 RmlC-like cupins
5 5 4 0 SCOP 55257 RBP11-like subunits of RNA polymerase
5 5 4 1 SCOP 55718 SCP-like
5 5 4 2 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
5 5 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
5 5 3 1 SCOP 81665 Calcium ATPase, transmembrane domain M
5 5 3 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
5 5 2 0 SCOP 52075 Outer arm dynein light chain 1
5 5 2 0 SCOP 68906 SAP domain
5 5 3 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
5 5 3 1 SCOP 55550 SH2 domain
5 5 2 0 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
5 5 3 1 SCOP 75632 Cullin homology domain
5 5 2 0 SCOP 161060 ATP synthase B chain-like
5 5 2 0 SCOP 55666 Ribonuclease PH domain 2-like
5 5 2 1 SCOP 81382 Skp1 dimerisation domain-like
5 5 3 1 SCOP 63887 P-domain of calnexin/calreticulin
4 4 2 0 SCOP 53927 Cytidine deaminase-like
4 4 2 0 SCOP 53613 Ribokinase-like
4 4 2 1 SCOP 47973 Ribosomal protein S7
4 4 2 0 SCOP 81606 PP2C-like
4 4 2 0 SCOP 52166 Ribosomal protein L4
4 3 2 1 SCOP 103491 Preprotein translocase SecY subunit
4 4 2 0 SCOP 46946 S13-like H2TH domain
4 4 3 0 SCOP 160369 Ribosomal protein L10-like
4 4 3 1 SCOP 52313 Ribosomal protein S2
4 4 2 2 SCOP 56104 SAICAR synthase-like
4 4 1 0 SCOP 54575 Ribosomal protein L31e
4 4 1 0 SCOP 103456 Preprotein translocase SecE subunit
4 4 2 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
4 4 3 0 SCOP 88723 PIN domain-like
4 4 1 1 SCOP 81406 Mitochondrial cytochrome c oxidase subunit IV
4 4 1 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
4 4 2 1 SCOP 49777 PEBP-like
4 4 1 0 SCOP 81427 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
4 4 3 1 SCOP 56529 FAH
4 4 1 1 SCOP 161084 MAPEG domain-like
4 4 4 1 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
4 4 2 1 SCOP 110857 Gamma-glutamyl cyclotransferase-like
4 4 2 0 SCOP 161111 Cation efflux protein transmembrane domain-like
4 4 3 0 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
4 4 1 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
4 4 4 1 SCOP 88697 PUA domain-like
4 3 2 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
4 4 1 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
4 4 3 1 SCOP 100939 SPOC domain-like
4 4 1 1 SCOP 111321 AF1104-like
4 4 1 0 SCOP 116820 Rps17e-like
4 4 2 0 SCOP 160374 RplX-like
4 4 3 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
4 4 1 0 SCOP 90123 ABC transporter transmembrane region
4 4 1 0 SCOP 117281 Kelch motif
4 4 3 0 SCOP 49265 Fibronectin type III
4 4 2 0 SCOP 55060 GHMP Kinase, C-terminal domain
4 4 4 2 SCOP 63380 Riboflavin synthase domain-like
4 4 3 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
4 4 3 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
4 4 1 0 SCOP 117892 Band 7/SPFH domain
4 4 1 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
4 4 2 0 SCOP 48350 GTPase activation domain, GAP
4 4 1 0 SCOP 158573 GINS helical bundle-like
4 4 2 0 SCOP 57256 Elafin-like
4 4 2 0 SCOP 161065 ATP synthase D chain-like
4 4 3 0 SCOP 48050 Hemocyanin, N-terminal domain
4 4 3 1 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
4 3 2 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
3 3 2 0 SCOP 46911 Ribosomal protein S18
3 3 1 1 SCOP 51366 Ribulose-phoshate binding barrel
3 3 2 0 SCOP 110324 Ribosomal L27 protein-like
3 3 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
3 3 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
3 3 3 2 SCOP 48150 DNA-glycosylase
3 3 1 1 SCOP 51713 tRNA-guanine transglycosylase
3 3 2 0 SCOP 54060 His-Me finger endonucleases
3 3 1 1 SCOP 69500 DTD-like
3 3 2 0 SCOP 140718 Mediator hinge subcomplex-like
3 3 1 1 SCOP 54648 DLC
3 3 1 1 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
3 3 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
3 3 3 1 SCOP 47027 Acyl-CoA binding protein
3 3 3 0 SCOP 54897 Protease propeptides/inhibitors
3 3 3 2 SCOP 74650 Galactose mutarotase-like
3 3 1 0 SCOP 51306 LexA/Signal peptidase
3 3 2 1 SCOP 48439 Protein prenylyltransferase
3 3 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
3 3 1 1 SCOP 69645 Arp2/3 complex subunits
3 3 2 1 SCOP 48208 Six-hairpin glycosidases
3 3 1 1 SCOP 47694 Cytochrome c oxidase subunit h
3 3 2 1 SCOP 55159 eIF1-like
3 3 3 0 SCOP 143113 NAP-like
3 3 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
3 2 2 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
3 3 2 1 SCOP 55931 Glutamine synthetase/guanido kinase
3 3 1 0 SCOP 51998 PFL-like glycyl radical enzymes
3 3 2 0 SCOP 102712 JAB1/MPN domain
3 3 2 1 SCOP 52016 LeuD/IlvD-like
3 3 2 1 SCOP 81301 Nucleotidyltransferase
3 3 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
3 3 1 1 SCOP 117856 AF0104/ALDC/Ptd012-like
3 2 2 0 SCOP 82153 FAS1 domain
3 3 1 0 SCOP 103025 Folate-binding domain
3 3 1 0 SCOP 161070 SNF-like
3 3 1 1 SCOP 56024 Phospholipase D/nuclease
3 3 3 0 SCOP 82171 DPP6 N-terminal domain-like
3 3 2 0 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
3 3 3 0 SCOP 55186 ThrRS/AlaRS common domain
3 2 2 1 SCOP 55979 DNA clamp
3 2 2 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
3 3 1 0 SCOP 69318 Integrin alpha N-terminal domain
3 3 3 1 SCOP 48619 Phospholipase A2, PLA2
3 3 1 0 SCOP 69304 Tricorn protease N-terminal domain
3 3 1 1 SCOP 142877 EndoU-like
3 3 3 1 SCOP 52935 PK C-terminal domain-like
3 2 2 0 SCOP 161093 MgtE membrane domain-like
3 3 2 1 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
3 3 1 1 SCOP 110019 ERO1-like
3 3 2 0 SCOP 48225 Seven-hairpin glycosidases
3 3 2 0 SCOP 57863 ArfGap/RecO-like zinc finger
3 3 1 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
3 3 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
3 3 3 0 SCOP 144232 HIT/MYND zinc finger-like
3 3 3 0 SCOP 48065 DBL homology domain (DH-domain)
3 1 1 0 SCOP 53738 Phosphoglucomutase, first 3 domains
3 3 2 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
3 3 3 1 SCOP 47446 Signal peptide-binding domain
3 3 2 1 SCOP 81271 TGS-like
3 3 1 1 SCOP 48508 Nuclear receptor ligand-binding domain
3 3 1 0 SCOP 48670 Transducin (heterotrimeric G protein), gamma chain
3 3 2 0 SCOP 101912 Sema domain
3 3 3 0 SCOP 69000 FAD-dependent thiol oxidase
3 3 1 0 SCOP 81415 Mitochondrial cytochrome c oxidase subunit VIc
3 3 2 1 SCOP 82109 MIR domain
3 3 3 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
3 3 1 0 SCOP 48464 ENTH/VHS domain
3 3 1 0 SCOP 140741 RUN domain-like
3 3 1 0 SCOP 81419 Mitochondrial cytochrome c oxidase subunit VIIa
3 3 1 0 SCOP 48097 Regulator of G-protein signaling, RGS
3 3 2 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
3 3 1 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
3 3 2 0 SCOP 69179 Integrin domains
3 3 2 1 SCOP 48479 Cytochrome c oxidase subunit E
3 3 1 0 SCOP 81698 FF domain
3 2 2 0 SCOP 49309 Transglutaminase, two C-terminal domains
3 3 2 0 SCOP 75399 Plakin repeat
3 3 3 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
2 2 1 1 SCOP 53790 Tetrapyrrole methylase
2 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
2 2 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
2 2 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
2 2 1 1 SCOP 75620 Release factor
2 2 1 0 SCOP 47336 ACP-like
2 2 1 0 SCOP 51695 PLC-like phosphodiesterases
2 2 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
2 2 2 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
2 2 2 0 SCOP 54862 4Fe-4S ferredoxins
2 2 1 1 SCOP 56770 HydA/Nqo6-like
2 2 2 1 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
2 2 2 1 SCOP 64005 Undecaprenyl diphosphate synthase
2 2 1 1 SCOP 54285 MoaD/ThiS
2 2 2 0 SCOP 55205 EPT/RTPC-like
2 2 1 0 SCOP 82657 BolA-like
2 2 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
2 2 1 0 SCOP 56796 Dehydroquinate synthase-like
2 2 1 1 SCOP 55387 Frataxin/Nqo15-like
2 2 2 1 SCOP 144217 CSL zinc finger
2 2 2 1 SCOP 50475 FMN-binding split barrel
2 2 1 0 SCOP 103464 Oligosaccharyltransferase subunit ost4p
2 2 1 1 SCOP 56634 Heme-dependent catalase-like
2 2 1 1 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 2 2 SCOP 46626 Cytochrome c
2 2 1 1 SCOP 57798 Casein kinase II beta subunit
2 2 1 0 SCOP 63393 RNA polymerase subunits
2 2 1 1 SCOP 55248 PCD-like
2 2 1 0 SCOP 144210 Nop10-like SnoRNP
2 2 1 1 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
2 2 2 1 SCOP 47819 HRDC-like
2 2 1 0 SCOP 53639 AraD/HMP-PK domain-like
2 2 1 2 SCOP 52972 ITPase-like
2 2 1 0 SCOP 118203 Vacuolar ATP synthase subunit C
2 2 1 1 SCOP 110849 ParB/Sulfiredoxin
2 2 1 0 SCOP 82282 Homocysteine S-methyltransferase
2 2 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
2 2 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 1 0 SCOP 53056 beta-carbonic anhydrase, cab
2 2 1 1 SCOP 64153 YjeF N-terminal domain-like
2 2 1 0 SCOP 55008 HMA, heavy metal-associated domain
2 2 2 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
2 2 2 0 SCOP 55961 Bet v1-like
2 2 2 1 SCOP 55418 eIF4e-like
2 2 1 1 SCOP 55770 Profilin (actin-binding protein)
2 2 1 0 SCOP 64268 PX domain
2 2 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
2 2 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
2 2 2 1 SCOP 53800 Chelatase
2 2 1 1 SCOP 81342 Transmembrane di-heme cytochromes
2 2 1 1 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 2 0 SCOP 144091 Rhomboid-like
2 2 2 0 SCOP 54631 CBS-domain pair
2 2 2 1 SCOP 51069 Carbonic anhydrase
2 2 1 0 SCOP 54909 Dimeric alpha+beta barrel
2 2 2 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
2 2 2 1 SCOP 50022 ISP domain
2 2 1 0 SCOP 81901 HCP-like
2 2 1 0 SCOP 54447 ssDNA-binding transcriptional regulator domain
2 2 1 0 SCOP 89550 PHP domain-like
2 2 2 1 SCOP 55797 PR-1-like
2 2 1 0 SCOP 81340 Clc chloride channel
2 2 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
2 2 1 1 SCOP 56762 HydB/Nqo4-like
2 2 2 1 SCOP 50800 PK beta-barrel domain-like
2 2 2 1 SCOP 53732 Aconitase iron-sulfur domain
2 2 1 0 SCOP 89095 GatB/YqeY motif
2 2 1 0 SCOP 160909 ATP12-like
2 2 1 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
2 2 1 0 SCOP 69322 Tricorn protease domain 2
2 2 2 0 SCOP 64076 MTH938-like
2 2 2 2 SCOP 51604 Enolase C-terminal domain-like
2 2 1 0 SCOP 46950 Double-stranded DNA-binding domain
2 1 1 0 SCOP 50346 PRC-barrel domain
2 2 1 1 SCOP 102462 Peptidyl-tRNA hydrolase II
2 1 1 0 SCOP 50199 Staphylococcal nuclease
2 2 2 0 SCOP 46589 tRNA-binding arm
2 2 2 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
2 2 2 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
2 2 2 0 SCOP 56176 FAD-binding/transporter-associated domain-like
2 2 2 0 SCOP 47661 t-snare proteins
2 2 1 0 SCOP 49313 Cadherin-like
2 2 2 0 SCOP 81995 beta-sandwich domain of Sec23/24
2 2 1 1 SCOP 52129 Caspase-like
2 2 2 0 SCOP 51971 Nucleotide-binding domain
2 2 2 0 SCOP 49464 Carboxypeptidase regulatory domain-like
2 2 2 0 SCOP 51011 Glycosyl hydrolase domain
2 2 2 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
2 2 2 0 SCOP 81383 F-box domain
2 2 1 0 SCOP 54171 DNA-binding domain
2 2 2 1 SCOP 54826 Enolase N-terminal domain-like
2 2 1 1 SCOP 81891 Poly A polymerase C-terminal region-like
2 2 1 0 SCOP 53920 Fe-only hydrogenase
2 2 2 1 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
2 2 1 0 SCOP 90209 Ran binding protein zinc finger-like
2 2 2 0 SCOP 49354 PapD-like
2 2 2 0 SCOP 81631 PAP/OAS1 substrate-binding domain
2 2 2 0 SCOP 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain
2 2 2 0 SCOP 110836 Hypothetical protein SAV1430
2 2 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
2 2 1 1 SCOP 55637 Cell cycle regulatory proteins
2 2 2 1 SCOP 158702 Sec63 N-terminal domain-like
2 2 2 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
2 2 2 1 SCOP 49348 Clathrin adaptor appendage domain
2 1 1 0 SCOP 49742 PHM/PNGase F
2 2 2 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 1 SCOP 116742 eIF2alpha middle domain-like
2 2 2 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
2 2 2 0 SCOP 57302 Snake toxin-like
2 2 1 0 SCOP 111357 Mitochondrial ATP synthase coupling factor 6
2 2 1 1 SCOP 101152 Mob1/phocein
2 2 1 1 SCOP 89817 Mago nashi protein
2 2 1 1 SCOP 48445 14-3-3 protein
2 2 2 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
2 2 1 0 SCOP 118359 Expressed protein At2g23090/F21P24.15
2 2 2 0 SCOP 47986 DEATH domain
2 2 1 0 SCOP 47220 alpha-catenin/vinculin-like
2 2 2 0 SCOP 103575 Plexin repeat
2 2 2 0 SCOP 57889 Cysteine-rich domain
2 2 2 0 SCOP 57924 Inhibitor of apoptosis (IAP) repeat
2 2 2 0 SCOP 56968 Lipovitellin-phosvitin complex; beta-sheet shell regions
2 2 1 1 SCOP 140984 PTPA-like
2 2 2 0 SCOP 117839 WWE domain
2 2 2 0 SCOP 82051 Obg GTP-binding protein N-terminal domain
2 2 2 0 SCOP 109905 Surp module (SWAP domain)
2 2 1 0 SCOP 57535 Complement control module/SCR domain
2 2 2 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
2 2 1 0 SCOP 64602 F1 ATPase inhibitor, IF1, C-terminal domain
2 2 2 0 SCOP 51269 AFP III-like domain
2 2 2 1 SCOP 54529 Mitochondrial glycoprotein MAM33-like
2 2 2 0 SCOP 47762 PAH2 domain
2 2 2 0 SCOP 140111 Endosomal sorting complex assembly domain
2 2 1 0 SCOP 160527 V-type ATPase subunit E-like
2 2 1 1 SCOP 47157 Mitochondrial import receptor subunit Tom20
2 2 1 1 SCOP 50989 Clathrin heavy-chain terminal domain
2 2 2 0 SCOP 69099 Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain
2 2 2 0 SCOP 47031 Second domain of FERM
2 1 1 0 SCOP 47045 RAP domain-like
2 2 1 0 SCOP 55277 GYF domain
2 2 1 0 SCOP 82615 Polo-box domain
2 2 2 0 SCOP 64586 C-terminal domain of ProRS
2 2 2 1 SCOP 81811 Helical domain of Sec23/24
2 2 2 0 SCOP 158230 PRP4-like
1 1 1 0 SCOP 81338 Aquaporin-like
1 1 1 1 SCOP 53167 Purine and uridine phosphorylases
1 1 1 0 SCOP 56420 Peptide deformylase
1 1 1 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 0 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 143034 L35p-like
1 1 1 0 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 53597 Dihydrofolate reductase-like
1 1 1 0 SCOP 52218 Flavoproteins
1 1 1 0 SCOP 141091 L21p-like
1 1 1 1 SCOP 51658 Xylose isomerase-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 52980 Restriction endonuclease-like
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 0 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 0 SCOP 51730 FAD-linked oxidoreductase
1 1 1 1 SCOP 55821 YrdC/RibB
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 0 SCOP 89360 HesB-like domain
1 1 1 0 SCOP 50715 Ribosomal protein L25-like
1 1 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
1 1 1 1 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 0 SCOP 55298 YjgF-like
1 1 1 1 SCOP 51419 PLP-binding barrel
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 52949 Macro domain-like
1 1 1 0 SCOP 109604 HD-domain/PDEase-like
1 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
1 1 1 1 SCOP 48256 Citrate synthase
1 1 1 0 SCOP 48613 Heme oxygenase-like
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 1 SCOP 51726 UROD/MetE-like
1 1 1 0 SCOP 53590 Nucleoside hydrolase
1 1 1 0 SCOP 53328 Formyltransferase
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 1 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
1 1 1 0 SCOP 56019 The spindle assembly checkpoint protein mad2
1 1 1 0 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 1 SCOP 56399 ADP-ribosylation
1 1 1 0 SCOP 58113 Apolipoprotein A-I
1 1 1 0 SCOP 52266 SGNH hydrolase
1 1 1 1 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 1 SCOP 46988 Tubulin chaperone cofactor A
1 1 1 1 SCOP 69618 HemD-like
1 1 1 0 SCOP 52768 Arginase/deacetylase
1 1 1 1 SCOP 55909 Pentein
1 1 1 1 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 46458 Globin-like
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 0 SCOP 81324 Voltage-gated potassium channels
1 1 1 0 SCOP 52091 SpoIIaa-like
1 1 1 1 SCOP 53795 PEP carboxykinase-like
1 1 1 0 SCOP 141571 Pentapeptide repeat-like
1 1 1 0 SCOP 46955 Putative DNA-binding domain
1 1 1 0 SCOP 118196 YaeB-like
1 1 1 0 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 0 SCOP 47413 lambda repressor-like DNA-binding domains
1 1 1 1 SCOP 56349 DNA breaking-rejoining enzymes
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 0 SCOP 51206 cAMP-binding domain-like
1 1 1 1 SCOP 54913 GlnB-like
1 1 1 0 SCOP 54736 ClpS-like
1 1 1 0 SCOP 50242 TIMP-like
1 1 1 1 SCOP 103365 Hypothetical protein PH1602
1 1 1 0 SCOP 69065 RNase III domain-like
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 1 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 1 SCOP 53213 LigB-like
1 1 1 0 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
1 1 1 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
1 1 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
1 1 1 1 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 0 SCOP 52335 Methylglyoxal synthase-like
1 1 1 0 SCOP 110581 Indigoidine synthase A-like
1 1 1 0 SCOP 140931 Fic-like
1 1 1 0 SCOP 57802 Rubredoxin-like
1 1 1 0 SCOP 55785 PYP-like sensor domain (PAS domain)
1 1 1 0 SCOP 55021 ACT-like
1 1 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
1 1 1 0 SCOP 47781 RuvA domain 2-like
1 1 1 0 SCOP 48695 Multiheme cytochromes
1 1 1 1 SCOP 110395 CutC-like
1 1 1 1 SCOP 56534 Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
1 1 1 0 SCOP 49452 Starch-binding domain-like
1 1 1 0 SCOP 47592 SWIB/MDM2 domain
1 1 1 0 SCOP 82704 AlbA-like
1 1 1 1 SCOP 74784 Translin
1 1 1 0 SCOP 160350 Rnp2-like
1 1 1 1 SCOP 46548 alpha-helical ferredoxin
1 1 1 0 SCOP 69819 MTH1598-like
1 1 1 1 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 1 SCOP 69695 SRP19
1 1 1 1 SCOP 55895 Ribonuclease Rh-like
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 1 SCOP 52743 Subtilisin-like
1 1 1 0 SCOP 50960 TolB, C-terminal domain
1 1 1 1 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 50405 Actin-crosslinking proteins
1 1 1 0 SCOP 69989 C-terminal domain of PLC-beta
1 1 1 1 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
1 1 1 0 SCOP 54106 LysM domain
1 1 1 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
1 1 1 1 SCOP 142921 WGR domain-like
1 1 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 56719 Type II DNA topoisomerase
1 1 1 1 SCOP 52922 TK C-terminal domain-like
1 1 1 0 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 50965 Galactose oxidase, central domain
1 1 1 0 SCOP 55973 S-adenosylmethionine synthetase
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 1 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 0 SCOP 160059 PriA/YqbF domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 49842 TNF-like
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 1 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 1 SCOP 140990 FtsH protease domain-like
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 0 SCOP 74853 Lamin A/C globular tail domain
1 1 1 0 SCOP 49363 Purple acid phosphatase, N-terminal domain
1 1 1 0 SCOP 53623 MurD-like peptide ligases, catalytic domain
1 1 1 0 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
1 1 1 0 SCOP 56042 PurM C-terminal domain-like
1 1 1 0 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
1 1 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 0 SCOP 57610 Thyroglobulin type-1 domain
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
1 1 1 0 SCOP 55326 PurM N-terminal domain-like
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
1 1 1 1 SCOP 101887 Apyrase
1 1 1 1 SCOP 56496 Fibrinogen C-terminal domain-like
1 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
1 1 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
1 1 1 0 SCOP 90250 Troponin coil-coiled subunits
1 1 1 0 SCOP 47741 CO dehydrogenase ISP C-domain like
1 1 1 0 SCOP 47857 Apolipophorin-III
1 1 1 0 SCOP 101494 Stathmin
1 1 1 0 SCOP 118310 AN1-like Zinc finger
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
1 1 1 0 SCOP 74924 Cap-Gly domain
1 1 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 82708 R3H domain
1 1 1 0 SCOP 46596 Eukaryotic DNA topoisomerase I, dispensable insert domain
1 1 1 0 SCOP 57845 B-box zinc-binding domain
1 1 1 1 SCOP 69203 Nucleoplasmin-like core domain
1 1 1 0 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
1 1 1 0 SCOP 49854 Spermadhesin, CUB domain
1 1 1 0 SCOP 56366 SMAD MH1 domain
1 1 1 0 SCOP 50353 Cytokine
1 1 1 0 SCOP 54277 CAD & PB1 domains
1 1 1 1 SCOP 47798 Barrier-to-autointegration factor, BAF
1 1 1 0 SCOP 111347 Rap/Ran-GAP
1 1 1 1 SCOP 63570 PABC (PABP) domain
1 1 1 0 SCOP 101447 Formin homology 2 domain (FH2 domain)
1 1 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
1 1 1 1 SCOP 50723 Core binding factor beta, CBF
1 1 1 0 SCOP 116846 MIT domain
1 1 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 1 1 SCOP 143724 PHP14-like
1 1 1 0 SCOP 52025 PA domain
1 1 1 0 SCOP 46984 Smac/diablo
1 1 1 1 SCOP 140102 ISY1 domain-like
1 1 1 1 SCOP 144074 E2F-DP heterodimerization region
1 1 1 0 SCOP 101288 L27 domain
1 1 1 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
1 1 1 0 SCOP 140106 Calcyclin-binding protein-like
1 1 1 0 SCOP 140864 TROVE domain-like
1 1 1 0 SCOP 63451 LEM domain
1 1 1 1 SCOP 47216 Proteasome activator
1 1 1 1 SCOP 143875 ERH-like
1 1 1 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
1 1 1 0 SCOP 57414 Hairpin loop containing domain-like
1 1 1 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
1 1 1 0 SCOP 63491 BAG domain
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 47050 VHP, Villin headpiece domain
1 1 1 0 SCOP 47454 A DNA-binding domain in eukaryotic transcription factors
1 1 1 0 SCOP 57603 FnI-like domain
1 1 1 0 SCOP 109925 Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
1 1 1 0 SCOP 57095 Scorpion toxin-like
1 1 1 0 SCOP 81778 Crustacean CHH/MIH/GIH neurohormone
1 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 0 SCOP 54511 GFP-like
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 57546 Crisp domain-like
1 1 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 1 SCOP 89942 eEF1-gamma domain
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
1 1 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
1 1 1 0 SCOP 109715 DEK C-terminal domain
1 1 1 0 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
1 1 1 0 SCOP 50916 Rap30/74 interaction domains
1 1 1 1 SCOP 101391 Hsp90 co-chaperone CDC37
1 1 1 0 SCOP 82895 TSP-1 type 1 repeat
1 1 1 0 SCOP 46942 Elongation factor TFIIS domain 2
1 1 1 0 SCOP 140427 VPS28 C-terminal domain-like
1 1 1 0 SCOP 48678 Moesin tail domain
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 0 SCOP 143503 PUG domain-like
1 1 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
1 1 1 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
1 1 1 0 SCOP 63501 Frizzled cysteine-rich domain
1 1 1 0 SCOP 89000 post-HMGL domain-like
1 1 1 1 SCOP 159042 Plus3-like
1 1 1 1 SCOP 88802 Pre-PUA domain
1 1 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
1 1 1 0 SCOP 69687 Integrin beta tail domain
1 1 1 0 SCOP 63763 SAND domain-like
1 1 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
1 1 1 0 SCOP 161245 Zinc hairpin stack
1 1 1 0 SCOP 140612 EB1 dimerisation domain-like
1 1 1 0 SCOP 102860 mRNA decapping enzyme DcpS N-terminal domain
1 1 1 1 SCOP 160897 Taf5 N-terminal domain-like
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 1 SCOP 160219 AMPKBI-like
1 1 1 0 SCOP 158235 SOCS box-like
1 1 1 0 SCOP 140586 Dcp2 domain-like
1 1 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
1 1 1 0 SCOP 81502 ISP transmembrane anchor
1 1 1 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
1 1 1 0 SCOP 82919 Zn-finger domain of Sec23/24
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 1 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
1 1 1 1 SCOP 160088 NRDP1 C-terminal domain-like
1 1 1 0 SCOP 109732 HBS1-like domain
1 1 1 0 SCOP 47055 TAF(II)230 TBP-binding fragment
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
1 1 1 0 SCOP 101238 XPC-binding domain
1 1 1 0 SCOP 101283 GRIP domain
1 1 1 0 SCOP 111469 Geminin coiled-coil domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Head morphogenesis protein gp7
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily Ribosome-binding factor A, RbfA
SCOP superfamily Inhibitor of vertebrate lysozyme, Ivy
SCOP superfamily Prokaryotic lipoproteins and lipoprotein localization factors
SCOP superfamily Cobalamin adenosyltransferase-like
SCOP superfamily GAT-like domain
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors
SCOP superfamily ssDNA viruses
SCOP superfamily Apical membrane antigen 1
SCOP superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region
SCOP superfamily Replication modulator SeqA, C-terminal DNA-binding domain
SCOP superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
SCOP superfamily Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
SCOP superfamily BRCA2 tower domain
SCOP superfamily BRCA2 helical domain
SCOP superfamily C-terminal domain of DFF45/ICAD (DFF-C domain)
SCOP superfamily Group V grass pollen allergen
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Photosystem I subunits PsaA/PsaB
SCOP superfamily Cytochrome c oxidase subunit II-like, transmembrane region
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily YebC-like
SCOP superfamily Rotavirus NSP2 fragment, C-terminal domain
SCOP superfamily HprK N-terminal domain-like
SCOP superfamily Arabinanase/levansucrase/invertase
SCOP superfamily YhbC-like, C-terminal domain
SCOP superfamily Major surface antigen p30, SAG1
SCOP superfamily YggU-like
SCOP superfamily IpsF-like
SCOP superfamily Ribosome binding protein Y (YfiA homologue)
SCOP superfamily Cloacin translocation domain
SCOP superfamily Hypothetical protein YjbJ
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Cell-division inhibitor MinC, N-terminal domain
SCOP superfamily Nicotinic receptor ligand binding domain-like
SCOP superfamily Ganglioside M2 (gm2) activator
SCOP superfamily PTS-regulatory domain, PRD
SCOP superfamily Type I dockerin domain
SCOP superfamily Bacterial hemolysins
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily XRCC4, C-terminal oligomerization domain
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Blood coagulation inhibitor (disintegrin)
SCOP superfamily Trefoil
SCOP superfamily Kringle-like
SCOP superfamily Defensin-like
SCOP superfamily Midkine
SCOP superfamily Bowman-Birk inhibitor, BBI
SCOP superfamily Agouti-related protein
SCOP superfamily Cyclotides
SCOP superfamily Viral glycoprotein, central and dimerisation domains
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Leukocidin-like
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily Outer membrane phospholipase A (OMPLA)
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Colicin
SCOP superfamily Upper collar protein gp10 (connector protein)
SCOP superfamily Replication terminator protein (Tus)
SCOP superfamily Non-globular alpha+beta subunits of globular proteins
SCOP superfamily Baseplate structural protein gp11
SCOP superfamily Penicillin binding protein dimerisation domain
SCOP superfamily ADC synthase
SCOP superfamily Nitrite and sulphite reductase 4Fe-4S domain-like
SCOP superfamily GAF domain-like
SCOP superfamily Homing endonucleases
SCOP superfamily Origin of replication-binding domain, RBD-like
SCOP superfamily Bactericidal permeability-increasing protein, BPI
SCOP superfamily DNA repair protein MutS, domain I
SCOP superfamily Cell division protein MinE topological specificity domain
SCOP superfamily LigT-like
SCOP superfamily FAD-linked oxidases, C-terminal domain
SCOP superfamily Chalcone isomerase
SCOP superfamily Cdc48 domain 2-like
SCOP superfamily Allophycocyanin linker chain (domain)
SCOP superfamily MHC antigen-recognition domain
SCOP superfamily Cystatin/monellin
SCOP superfamily Staphylokinase/streptokinase
SCOP superfamily Interleukin 8-like chemokines
SCOP superfamily Prion-like
SCOP superfamily "Helical backbone" metal receptor
SCOP superfamily PTS system IIB component-like
SCOP superfamily Cobalamin (vitamin B12)-binding domain
SCOP superfamily Dihydropteroate synthetase-like
SCOP superfamily RuBisCo, C-terminal domain
SCOP superfamily Pectin lyase-like
SCOP superfamily Mannose-binding lectins
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily Outer surface protein
SCOP superfamily Carbohydrate binding domain
SCOP superfamily Nitrous oxide reductase, N-terminal domain
SCOP superfamily beta-Barrel protease inhibitors
SCOP superfamily Acid proteases
SCOP superfamily STI-like
SCOP superfamily N-terminal domains of the minor coat protein g3p
SCOP superfamily Electron transport accessory proteins
SCOP superfamily gp9
SCOP superfamily ENV polyprotein, receptor-binding domain
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily Bacterial adhesins
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily Superoxide reductase-like
SCOP superfamily CBD9-like
SCOP superfamily beta-Galactosidase/glucuronidase domain
SCOP superfamily Serum albumin-like
SCOP superfamily Phospholipase C/P1 nuclease
SCOP superfamily gene 59 helicase assembly protein
SCOP superfamily Sec7 domain
SCOP superfamily ERP29 C domain-like
SCOP superfamily lambda integrase-like, N-terminal domain
SCOP superfamily Transferrin receptor-like dimerisation domain
SCOP superfamily STAT
SCOP superfamily Methionine synthase domain
SCOP superfamily Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
SCOP superfamily Cytochromes
SCOP superfamily Apolipoprotein
SCOP superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
SCOP superfamily ARID-like
SCOP superfamily HR1 repeat
SCOP superfamily DNA polymerase III theta subunit-like
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily RILP dimerisation region
SCOP superfamily T-antigen specific domain-like
SCOP superfamily E7 C-terminal domain-like
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily MetI-like
SCOP superfamily Photosystem II antenna protein-like
SCOP superfamily CV3147-like
SCOP superfamily SSO1389-like
SCOP superfamily Poly(A) polymerase catalytic subunit-like
SCOP superfamily YNR034W-A-like
SCOP superfamily FLJ32549 C-terminal domain-like
SCOP superfamily SMI1/KNR4-like
SCOP superfamily PA1123-like
SCOP superfamily BLRF2-like
SCOP superfamily PB2 C-terminal domain-like
SCOP superfamily SP0830-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily NMB0488-like
SCOP superfamily YcgL-like
SCOP superfamily CbiG N-terminal domain-like
SCOP superfamily Cgl1923-like
SCOP superfamily TBP-interacting protein-like
SCOP superfamily HIN-2000 domain-like
SCOP superfamily BC4932-like
SCOP superfamily YopX-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily PMT central region-like
SCOP superfamily Sama2622-like
SCOP superfamily MtlR-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily BH3980-like
SCOP superfamily GspK insert domain-like
SCOP superfamily PG0775 C-terminal domain-like
SCOP superfamily YvfG-like
SCOP superfamily occludin/ELL-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily Eferin C-derminal domain-like
SCOP superfamily MPN010-like
SCOP superfamily ImpE-like
SCOP superfamily FdhE-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily Oxysterol-binding protein-like
SCOP superfamily YwmB-like
SCOP superfamily L28p-like
SCOP superfamily ApbE-like
SCOP superfamily MK0786-like
SCOP superfamily FwdE-like
SCOP superfamily TRCF domain-like
SCOP superfamily BB1717-like
SCOP superfamily Kinetochore globular domain
SCOP superfamily RelE-like
SCOP superfamily YktB/PF0168-like
SCOP superfamily CAC2185-like
SCOP superfamily Hcp1-like
SCOP superfamily PilZ domain-like
SCOP superfamily ICP-like
SCOP superfamily Glu-tRNAGln amidotransferase C subunit
SCOP superfamily USP8 N-terminal domain-like
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily SP0561-like
SCOP superfamily YozE-like
SCOP superfamily FlgN-like
SCOP superfamily TM0693-like
SCOP superfamily HP1531-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily BSD domain-like
SCOP superfamily WRKY DNA-binding domain
SCOP superfamily Connexin43
SCOP superfamily Phosphoprotein M1, C-terminal domain
SCOP superfamily LEA14-like
SCOP superfamily Accessory protein X4 (ORF8, ORF7a)
SCOP superfamily RNA-binding protein She2p
SCOP superfamily EspA/CesA-like
SCOP superfamily Hook domain
SCOP superfamily DNA methylase specificity domain
SCOP superfamily Fzo-like conserved region
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily OmpH-like
SCOP superfamily CbiD-like
SCOP superfamily Recombination protein RecR
SCOP superfamily TTHA0583/YokD-like
SCOP superfamily Oligoxyloglucan reducing end-specific cellobiohydrolase
SCOP superfamily Her-1
SCOP superfamily Hypothetical protein MG354
SCOP superfamily I/LWEQ domain
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Hypothetical protein D-63
SCOP superfamily KRAB domain (Kruppel-associated box)
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily Proline/betaine transporter ProP, C-terminal cytoplasmic domain
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Major capsid protein VP5
SCOP superfamily Tombusvirus P19 core protein, VP19
SCOP superfamily Chromosomal protein MC1
SCOP superfamily Trimeric adhesin
SCOP superfamily DNA-binding pseudobarrel domain
SCOP superfamily Putative isomerase YbhE
SCOP superfamily Aminomethyltransferase beta-barrel domain
SCOP superfamily PAZ domain
SCOP superfamily ASF1-like
SCOP superfamily C-terminal domain of Ku80
SCOP superfamily Superantigen MAM
SCOP superfamily YgfB-like
SCOP superfamily Invasion protein A (SipA) , C-terminal actin binding domain
SCOP superfamily N-terminal domain of adenylylcyclase associated protein, CAP
SCOP superfamily PWI domain
SCOP superfamily Nonstructural protein ns2, Nep, M1-binding domain
SCOP superfamily IP3 receptor type 1 binding core, domain 2
SCOP superfamily Plant proteinase inhibitors

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.