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  Home > Genomes > Superfamily assignments for Manihot esculenta v147


Manihot esculenta v147 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot; Manihot esculenta

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 34151 total
21616 (63 %) with assignment
390 average length
45 % amino acid coverage
Domains: 30061 total
961 unique superfamilies
816 unique families
278 average length
31.3 average superfamily size
97 % formed by duplication
Domain combinations: 927 domain pairs
3378 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
1603 1578 122 4 SCOP 56112 Protein kinase-like (PK-like)
1581 1378 226 11 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
984 755 136 2 SCOP 52058 L domain-like
743 688 88 3 SCOP 57850 RING/U-box
614 426 54 1 SCOP 54928 RNA-binding domain, RBD
586 554 34 2 SCOP 46689 Homeodomain-like
574 478 86 10 SCOP 48371 ARM repeat
539 532 46 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
517 398 68 2 SCOP 48452 TPR-like
441 441 17 8 SCOP 53474 alpha/beta-Hydrolases
379 352 57 1 SCOP 50978 WD40 repeat-like
354 311 24 15 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
348 286 92 0 SCOP 52047 RNI-like
348 345 5 1 SCOP 48264 Cytochrome P450
343 302 42 5 SCOP 52833 Thioredoxin-like
312 311 38 8 SCOP 51445 (Trans)glycosidases
300 287 6 0 SCOP 103473 MFS general substrate transporter
287 280 9 5 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
271 271 46 0 SCOP 81383 F-box domain
269 254 33 1 SCOP 47473 EF-hand
242 237 45 4 SCOP 46785 "Winged helix" DNA-binding domain
238 213 12 1 SCOP 54171 DNA-binding domain
230 228 7 3 SCOP 51126 Pectin lyase-like
220 115 8 2 SCOP 49503 Cupredoxins
220 167 22 0 SCOP 57667 beta-beta-alpha zinc fingers
212 212 6 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
207 205 11 3 SCOP 51197 Clavaminate synthase-like
206 206 36 8 SCOP 56784 HAD-like
204 196 33 1 SCOP 48403 Ankyrin repeat
200 163 29 5 SCOP 51905 FAD/NAD(P)-binding domain
195 153 41 3 SCOP 54236 Ubiquitin-like
191 131 30 1 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
187 184 17 4 SCOP 53448 Nucleotide-diphospho-sugar transferases
184 148 17 1 SCOP 101936 DNA-binding pseudobarrel domain
168 137 50 5 SCOP 50249 Nucleic acid-binding proteins
166 119 9 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
160 137 48 1 SCOP 57903 FYVE/PHD zinc finger
153 153 22 9 SCOP 54001 Cysteine proteinases
153 79 33 0 SCOP 90229 CCCH zinc finger
147 80 20 4 SCOP 53067 Actin-like ATPase domain
146 146 26 1 SCOP 46565 Chaperone J-domain
145 141 10 5 SCOP 53383 PLP-dependent transferases
145 127 19 1 SCOP 55961 Bet v1-like
140 65 25 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
138 138 7 1 SCOP 81606 PP2C-like
134 107 25 0 SCOP 57756 Retrovirus zinc finger-like domains
133 133 17 3 SCOP 49899 Concanavalin A-like lectins/glucanases
132 93 10 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
132 132 3 1 SCOP 101941 NAC domain
131 131 3 1 SCOP 48113 Heme-dependent peroxidases
130 118 13 0 SCOP 51110 alpha-D-mannose-specific plant lectins
129 111 6 1 SCOP 118290 WRKY DNA-binding domain
125 123 19 4 SCOP 53098 Ribonuclease H-like
123 74 11 1 SCOP 47954 Cyclin-like
123 122 13 0 SCOP 54277 CAD & PB1 domains
111 83 17 3 SCOP 49785 Galactose-binding domain-like
110 61 5 2 SCOP 53901 Thiolase-like
110 110 4 1 SCOP 47699 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
106 88 10 1 SCOP 50129 GroES-like
106 106 11 1 SCOP 50630 Acid proteases
106 103 7 7 SCOP 51182 RmlC-like cupins
103 102 25 0 SCOP 54695 POZ domain
102 102 6 2 SCOP 47113 Histone-fold
102 52 20 1 SCOP 55021 ACT-like
100 100 4 1 SCOP 101148 Plant invertase/pectin methylesterase inhibitor
99 87 23 0 SCOP 81901 HCP-like
98 98 8 2 SCOP 54495 UBC-like
93 36 8 2 SCOP 55753 Actin depolymerizing proteins
92 92 5 1 SCOP 103506 Mitochondrial carrier
91 91 10 4 SCOP 56300 Metallo-dependent phosphatases
91 55 12 0 SCOP 90123 ABC transporter transmembrane region
90 90 9 3 SCOP 49764 HSP20-like chaperones
89 88 11 1 SCOP 47616 GST C-terminal domain-like
89 89 3 0 SCOP 57959 Leucine zipper domain
86 79 30 8 SCOP 54211 Ribosomal protein S5 domain 2-like
84 69 12 0 SCOP 55008 HMA, heavy metal-associated domain
84 84 25 3 SCOP 50729 PH domain-like
81 81 3 0 SCOP 55455 SRF-like
79 79 18 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
79 79 4 1 SCOP 52266 SGNH hydrolase
79 68 30 0 SCOP 46934 UBA-like
75 75 3 2 SCOP 50685 Barwin-like endoglucanases
74 74 9 1 SCOP 52743 Subtilisin-like
73 55 7 3 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
73 73 22 1 SCOP 81665 Calcium ATPase, transmembrane domain M
71 69 13 1 SCOP 117281 Kelch motif
69 64 15 1 SCOP 52172 CheY-like
67 56 16 0 SCOP 81324 Voltage-gated potassium channels
66 66 10 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
65 65 6 3 SCOP 48576 Terpenoid synthases
65 63 7 1 SCOP 56801 Acetyl-CoA synthetase-like
65 65 9 3 SCOP 64356 SNARE-like
65 65 16 1 SCOP 81653 Calcium ATPase, transduction domain A
64 61 25 3 SCOP 81296 E set domains
64 62 14 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
64 48 14 0 SCOP 54631 CBS-domain pair
64 54 17 1 SCOP 49599 TRAF domain-like
63 41 9 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
59 55 9 4 SCOP 52096 ClpP/crotonase
59 55 13 0 SCOP 58038 SNARE fusion complex
59 55 19 2 SCOP 50447 Translation proteins
57 56 24 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
55 26 14 0 SCOP 90209 Ran binding protein zinc finger-like
55 55 10 1 SCOP 48464 ENTH/VHS domain
54 54 13 1 SCOP 52087 CRAL/TRIO domain
52 43 9 1 SCOP 54534 FKBP-like
52 52 6 2 SCOP 48208 Six-hairpin glycosidases
52 39 7 0 SCOP 82153 FAS1 domain
52 27 9 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
51 48 23 4 SCOP 52374 Nucleotidylyl transferase
51 51 18 2 SCOP 82199 SET domain
50 50 4 1 SCOP 81338 Aquaporin-like
50 50 6 1 SCOP 55811 Nudix
50 50 4 1 SCOP 50182 Sm-like ribonucleoproteins
50 50 6 1 SCOP 74788 Cullin repeat-like
50 26 4 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
49 30 5 3 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
49 40 11 0 SCOP 50985 RCC1/BLIP-II
49 49 11 4 SCOP 74650 Galactose mutarotase-like
48 44 10 2 SCOP 56219 DNase I-like
47 47 7 5 SCOP 51569 Aldolase
47 47 2 1 SCOP 51430 NAD(P)-linked oxidoreductase
47 47 9 1 SCOP 54427 NTF2-like
47 46 12 1 SCOP 51206 cAMP-binding domain-like
47 25 11 1 SCOP 56024 Phospholipase D/nuclease
46 41 11 1 SCOP 50104 Translation proteins SH3-like domain
46 46 4 2 SCOP 53720 ALDH-like
46 46 7 2 SCOP 54518 Tubby C-terminal domain-like
46 46 16 0 SCOP 52200 Toll/Interleukin receptor TIR domain
46 46 8 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
45 33 14 0 SCOP 54768 dsRNA-binding domain-like
45 45 1 1 SCOP 49590 PHL pollen allergen
44 44 21 2 SCOP 55681 Class II aaRS and biotin synthetases
44 44 15 3 SCOP 81301 Nucleotidyltransferase
44 44 3 0 SCOP 117856 AF0104/ALDC/Ptd012-like
44 42 17 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
44 44 12 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
43 42 17 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
43 43 9 1 SCOP 50891 Cyclophilin-like
42 42 4 1 SCOP 103511 Chlorophyll a-b binding protein
42 42 19 1 SCOP 53300 vWA-like
42 42 8 0 SCOP 46938 CRAL/TRIO N-terminal domain
42 42 10 1 SCOP 47370 Bromodomain
41 35 10 3 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
40 40 13 4 SCOP 53187 Zn-dependent exopeptidases
40 40 21 4 SCOP 88697 PUA domain-like
39 39 9 7 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
39 37 9 1 SCOP 47095 HMG-box
39 39 8 2 SCOP 56176 FAD-binding/transporter-associated domain-like
38 38 9 0 SCOP 50965 Galactose oxidase, central domain
37 37 5 1 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
37 37 8 0 SCOP 51011 Glycosyl hydrolase domain
36 31 6 2 SCOP 51695 PLC-like phosphodiesterases
36 16 7 1 SCOP 63411 LuxS/MPP-like metallohydrolase
36 36 6 1 SCOP 52490 Tubulin nucleotide-binding domain-like
36 36 6 1 SCOP 55307 Tubulin C-terminal domain-like
36 36 9 4 SCOP 54373 FAD-linked reductases, C-terminal domain
35 35 10 4 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
35 19 3 0 SCOP 81333 F1F0 ATP synthase subunit C
35 33 7 3 SCOP 51161 Trimeric LpxA-like enzymes
35 35 11 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
35 35 8 1 SCOP 52025 PA domain
34 28 11 2 SCOP 52317 Class I glutamine amidotransferase-like
34 32 7 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
34 32 12 3 SCOP 63380 Riboflavin synthase domain-like
34 25 16 0 SCOP 52113 BRCT domain
33 30 17 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
33 33 9 1 SCOP 53850 Periplasmic binding protein-like II
33 22 13 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
33 33 6 1 SCOP 47661 t-snare proteins
33 33 4 1 SCOP 49870 Osmotin, thaumatin-like protein
33 24 13 0 SCOP 54160 Chromo domain-like
33 33 8 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
32 31 6 2 SCOP 53254 Phosphoglycerate mutase-like
32 30 10 1 SCOP 52777 CoA-dependent acyltransferases
32 18 9 1 SCOP 54980 EF-G C-terminal domain-like
32 32 9 0 SCOP 63748 Tudor/PWWP/MBT
31 31 4 3 SCOP 53613 Ribokinase-like
31 26 8 3 SCOP 52821 Rhodanese/Cell cycle control phosphatase
31 30 10 1 SCOP 51230 Single hybrid motif
31 31 6 0 SCOP 89009 GAT-like domain
30 26 10 1 SCOP 50494 Trypsin-like serine proteases
30 16 6 0 SCOP 75471 YhbY-like
30 23 11 0 SCOP 50156 PDZ domain-like
30 30 4 1 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
29 27 7 2 SCOP 53271 PRTase-like
29 29 5 1 SCOP 51395 FMN-linked oxidoreductases
29 29 9 1 SCOP 49879 SMAD/FHA domain
29 29 4 3 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
29 29 6 1 SCOP 81631 PAP/OAS1 substrate-binding domain
29 29 2 1 SCOP 141562 At5g01610-like
28 28 13 1 SCOP 56104 SAICAR synthase-like
28 28 6 0 SCOP 144091 Rhomboid-like
28 16 8 1 SCOP 55785 PYP-like sensor domain (PAS domain)
28 24 13 1 SCOP 47592 SWIB/MDM2 domain
28 28 7 2 SCOP 52029 GroEL apical domain-like
28 28 2 1 SCOP 48445 14-3-3 protein
28 25 10 0 SCOP 57889 Cysteine-rich domain
27 27 3 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
27 27 6 3 SCOP 48150 DNA-glycosylase
27 27 8 1 SCOP 56399 ADP-ribosylation
27 22 5 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
27 25 3 1 SCOP 117070 LEA14-like
27 24 12 0 SCOP 82171 DPP6 N-terminal domain-like
27 9 1 1 SCOP 55973 S-adenosylmethionine synthetase
26 26 4 0 SCOP 57829 Zn-binding ribosomal proteins
26 26 6 2 SCOP 55315 L30e-like
26 26 9 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
26 10 3 0 SCOP 47762 PAH2 domain
25 25 6 2 SCOP 53137 Translational machinery components
25 25 7 3 SCOP 55120 Pseudouridine synthase
25 25 7 1 SCOP 54292 2Fe-2S ferredoxin-like
25 22 8 0 SCOP 57997 Tropomyosin
25 25 7 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
25 24 5 1 SCOP 48592 GroEL equatorial domain-like
25 24 9 0 SCOP 81923 Double Clp-N motif
25 25 10 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
25 23 3 0 SCOP 118310 AN1-like Zinc finger
25 9 5 1 SCOP 53738 Phosphoglucomutase, first 3 domains
24 24 5 1 SCOP 49363 Purple acid phosphatase, N-terminal domain
24 24 3 0 SCOP 49354 PapD-like
24 24 3 0 SCOP 47769 SAM/Pointed domain
24 24 10 1 SCOP 56204 Hect, E3 ligase catalytic domain
24 24 6 1 SCOP 103612 SBT domain
23 23 3 1 SCOP 48484 Lipoxigenase
23 23 5 0 SCOP 50800 PK beta-barrel domain-like
23 22 4 0 SCOP 54849 GroEL-intermediate domain like
22 22 4 2 SCOP 100950 NagB/RpiA/CoA transferase-like
22 22 9 3 SCOP 56672 DNA/RNA polymerases
22 22 5 2 SCOP 52151 FabD/lysophospholipase-like
22 20 8 0 SCOP 57783 Zinc beta-ribbon
22 18 8 0 SCOP 54106 LysM domain
22 22 7 1 SCOP 140990 FtsH protease domain-like
22 22 7 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
22 19 6 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
21 21 3 1 SCOP 75304 Amidase signature (AS) enzymes
21 21 3 2 SCOP 47240 Ferritin-like
21 17 4 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
21 20 10 0 SCOP 49452 Starch-binding domain-like
20 20 4 5 SCOP 51366 Ribulose-phoshate binding barrel
20 20 9 1 SCOP 55920 Creatinase/aminopeptidase
20 17 8 2 SCOP 53633 Carbamate kinase-like
20 20 3 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
20 18 7 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
20 20 2 1 SCOP 55724 Mog1p/PsbP-like
20 20 7 0 SCOP 57863 ArfGap/RecO-like zinc finger
20 17 8 0 SCOP 51045 WW domain
20 10 2 1 SCOP 54416 Amine oxidase N-terminal region
19 19 8 6 SCOP 51556 Metallo-dependent hydrolases
19 19 6 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
19 19 3 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
19 19 1 1 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
19 19 3 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
19 15 6 2 SCOP 55781 GAF domain-like
19 19 2 1 SCOP 53056 beta-carbonic anhydrase, cab
19 19 10 1 SCOP 50022 ISP domain
19 10 4 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
19 17 8 1 SCOP 75005 Arabinanase/levansucrase/invertase
19 19 4 0 SCOP 52935 PK C-terminal domain-like
19 19 8 0 SCOP 144232 HIT/MYND zinc finger-like
19 19 4 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
18 17 4 1 SCOP 53784 Phosphofructokinase
18 18 5 2 SCOP 52218 Flavoproteins
18 17 3 1 SCOP 56655 Carbohydrate phosphatase
18 17 5 0 SCOP 63829 Calcium-dependent phosphotriesterase
18 18 9 2 SCOP 109604 HD-domain/PDEase-like
18 18 8 1 SCOP 47576 Calponin-homology domain, CH-domain
18 18 4 1 SCOP 102405 MCP/YpsA-like
18 18 1 1 SCOP 55797 PR-1-like
18 17 4 1 SCOP 53955 Lysozyme-like
18 18 5 0 SCOP 53822 Periplasmic binding protein-like I
18 12 10 0 SCOP 69065 RNase III domain-like
18 18 2 2 SCOP 52922 TK C-terminal domain-like
18 18 5 0 SCOP 47090 PGBD-like
18 18 4 1 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
18 4 3 0 SCOP 81698 FF domain
17 17 3 2 SCOP 48557 L-aspartase-like
17 17 10 1 SCOP 54862 4Fe-4S ferredoxins
17 13 2 1 SCOP 54909 Dimeric alpha+beta barrel
17 17 8 0 SCOP 161111 Cation efflux protein transmembrane domain-like
17 5 2 0 SCOP 50199 Staphylococcal nuclease
17 17 1 1 SCOP 56327 LDH C-terminal domain-like
17 17 2 0 SCOP 117892 Band 7/SPFH domain
17 17 3 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
16 16 7 0 SCOP 103657 BAR/IMD domain-like
16 16 4 0 SCOP 47336 ACP-like
16 16 6 3 SCOP 102114 Radical SAM enzymes
16 14 4 1 SCOP 56815 Sec1/munc18-like (SM) proteins
16 16 4 1 SCOP 54648 DLC
16 16 10 1 SCOP 52954 Class II aaRS ABD-related
16 16 7 4 SCOP 52467 DHS-like NAD/FAD-binding domain
16 12 3 1 SCOP 54403 Cystatin/monellin
16 16 5 1 SCOP 101690 PAZ domain
16 16 3 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
16 14 4 1 SCOP 47862 Saposin
15 15 5 0 SCOP 55174 Alpha-L RNA-binding motif
15 15 3 1 SCOP 50475 FMN-binding split barrel
15 9 4 2 SCOP 51726 UROD/MetE-like
15 15 3 0 SCOP 53649 Alkaline phosphatase-like
15 15 3 0 SCOP 51306 LexA/Signal peptidase
15 15 3 1 SCOP 55159 eIF1-like
15 15 2 0 SCOP 52091 SpoIIaa-like
15 14 2 0 SCOP 140383 BSD domain-like
14 14 2 0 SCOP 53167 Purine and uridine phosphorylases
14 14 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
14 14 2 1 SCOP 143113 NAP-like
14 14 4 2 SCOP 52768 Arginase/deacetylase
14 14 2 1 SCOP 111352 Ammonium transporter
14 10 3 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
14 14 3 0 SCOP 54736 ClpS-like
14 14 4 1 SCOP 82704 AlbA-like
14 14 3 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
14 14 4 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
14 14 11 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
14 14 5 1 SCOP 48019 post-AAA+ oligomerization domain-like
14 14 8 0 SCOP 81995 beta-sandwich domain of Sec23/24
14 14 5 1 SCOP 55060 GHMP Kinase, C-terminal domain
14 14 3 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
13 11 6 2 SCOP 53927 Cytidine deaminase-like
13 13 3 0 SCOP 46579 Prefoldin
13 13 1 0 SCOP 54654 CI-2 family of serine protease inhibitors
13 11 8 1 SCOP 52440 PreATP-grasp domain
13 12 8 0 SCOP 68906 SAP domain
13 13 2 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
13 13 8 0 SCOP 46774 ARID-like
13 13 4 0 SCOP 158639 ENT-like
13 11 5 0 SCOP 109905 Surp module (SWAP domain)
13 13 5 1 SCOP 75632 Cullin homology domain
13 13 5 0 SCOP 63491 BAG domain
13 13 5 0 SCOP 57016 Plant lectins/antimicrobial peptides
13 13 3 0 SCOP 160219 AMPKBI-like
13 13 7 0 SCOP 82919 Zn-finger domain of Sec23/24
12 12 4 1 SCOP 52080 Ribosomal proteins L15p and L18e
12 11 3 0 SCOP 55129 Ribosomal protein L30p/L7e
12 12 8 1 SCOP 88723 PIN domain-like
12 12 6 1 SCOP 47819 HRDC-like
12 12 5 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
12 12 3 0 SCOP 57802 Rubredoxin-like
12 8 5 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
12 12 4 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
12 12 4 0 SCOP 48350 GTPase activation domain, GAP
12 12 2 1 SCOP 47874 Annexin
12 12 6 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
12 12 3 0 SCOP 110942 HSP90 C-terminal domain
12 9 4 0 SCOP 57933 TAZ domain
12 12 6 1 SCOP 81811 Helical domain of Sec23/24
11 10 5 2 SCOP 54197 HIT-like
11 11 2 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
11 11 6 2 SCOP 75217 alpha/beta knot
11 10 4 1 SCOP 64005 Undecaprenyl diphosphate synthase
11 11 2 1 SCOP 56634 Heme-dependent catalase-like
11 11 4 0 SCOP 54897 Protease propeptides/inhibitors
11 11 6 1 SCOP 56317 Carbon-nitrogen hydrolase
11 11 6 0 SCOP 161219 CHY zinc finger-like
11 11 1 1 SCOP 49777 PEBP-like
11 11 4 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
11 11 6 0 SCOP 52075 Outer arm dynein light chain 1
11 11 4 1 SCOP 49348 Clathrin adaptor appendage domain
11 11 4 0 SCOP 82708 R3H domain
11 11 7 1 SCOP 81271 TGS-like
11 11 2 0 SCOP 47050 VHP, Villin headpiece domain
11 9 4 0 SCOP 55666 Ribonuclease PH domain 2-like
11 11 5 0 SCOP 109715 DEK C-terminal domain
11 11 4 0 SCOP 55277 GYF domain
10 10 4 2 SCOP 53697 SIS domain
10 10 1 1 SCOP 56047 Ribosomal protein S8
10 10 2 0 SCOP 160369 Ribosomal protein L10-like
10 10 2 0 SCOP 48140 Ribosomal protein L19 (L19e)
10 10 6 1 SCOP 52949 Macro domain-like
10 10 1 1 SCOP 57798 Casein kinase II beta subunit
10 10 4 0 SCOP 144000 Oxysterol-binding protein-like
10 10 4 0 SCOP 55257 RBP11-like subunits of RNA polymerase
10 10 3 0 SCOP 64268 PX domain
10 10 5 2 SCOP 55931 Glutamine synthetase/guanido kinase
10 10 1 1 SCOP 51069 Carbonic anhydrase
10 10 3 0 SCOP 102712 JAB1/MPN domain
10 10 4 0 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
10 10 3 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
10 8 4 0 SCOP 55136 Probable bacterial effector-binding domain
10 10 4 0 SCOP 160443 SMR domain-like
10 6 2 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
10 10 2 1 SCOP 49998 Amine oxidase catalytic domain
10 10 5 1 SCOP 48425 Sec7 domain
10 10 2 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
10 10 3 1 SCOP 81382 Skp1 dimerisation domain-like
10 10 5 0 SCOP 161245 Zinc hairpin stack
10 10 3 1 SCOP 54585 Cdc48 domain 2-like
9 9 2 2 SCOP 51316 Mss4-like
9 9 5 2 SCOP 55821 YrdC/RibB
9 9 5 1 SCOP 48613 Heme oxygenase-like
9 8 3 2 SCOP 54506 Diaminopimelate epimerase-like
9 9 3 1 SCOP 49329 Cu,Zn superoxide dismutase-like
9 9 2 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
9 9 2 0 SCOP 47072 Cysteine alpha-hairpin motif
9 6 3 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
9 9 2 1 SCOP 50692 ADC-like
9 9 4 1 SCOP 81340 Clc chloride channel
9 7 5 0 SCOP 47781 RuvA domain 2-like
9 9 7 1 SCOP 51246 Rudiment single hybrid motif
9 9 2 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
9 9 3 1 SCOP 54821 Ribosomal protein S3 C-terminal domain
9 9 3 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
9 5 3 1 SCOP 56053 Ribosomal protein L6
9 8 7 1 SCOP 158702 Sec63 N-terminal domain-like
9 9 5 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
9 9 2 0 SCOP 110004 Glycolipid transfer protein, GLTP
9 9 3 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
9 9 6 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
9 9 3 0 SCOP 46942 Elongation factor TFIIS domain 2
9 9 8 0 SCOP 159042 Plus3-like
9 9 5 0 SCOP 101238 XPC-binding domain
8 8 2 0 SCOP 54570 Ribosomal protein S19
8 8 2 1 SCOP 50193 Ribosomal protein L14
8 8 2 1 SCOP 103491 Preprotein translocase SecY subunit
8 8 4 0 SCOP 46946 S13-like H2TH domain
8 8 3 0 SCOP 110324 Ribosomal L27 protein-like
8 8 5 1 SCOP 52980 Restriction endonuclease-like
8 8 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
8 8 4 1 SCOP 52313 Ribosomal protein S2
8 8 3 2 SCOP 51419 PLP-binding barrel
8 8 3 1 SCOP 48256 Citrate synthase
8 5 3 1 SCOP 53590 Nucleoside hydrolase
8 8 2 2 SCOP 46626 Cytochrome c
8 8 6 0 SCOP 47027 Acyl-CoA binding protein
8 8 4 1 SCOP 88713 Glycoside hydrolase/deacetylase
8 8 2 1 SCOP 55418 eIF4e-like
8 8 1 1 SCOP 55770 Profilin (actin-binding protein)
8 8 3 1 SCOP 53732 Aconitase iron-sulfur domain
8 8 5 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
8 8 3 1 SCOP 101386 all-alpha NTP pyrophosphatases
8 8 7 0 SCOP 69322 Tricorn protease domain 2
8 7 4 2 SCOP 50814 Lipocalins
8 8 3 2 SCOP 51604 Enolase C-terminal domain-like
8 8 6 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
8 8 2 1 SCOP 102198 Putative cyclase
8 8 1 1 SCOP 89124 Nop domain
8 8 5 0 SCOP 101898 NHL repeat
8 7 4 0 SCOP 50405 Actin-crosslinking proteins
8 8 2 0 SCOP 52129 Caspase-like
8 8 3 1 SCOP 52210 Succinyl-CoA synthetase domains
8 8 6 1 SCOP 48334 DNA repair protein MutS, domain III
8 8 3 1 SCOP 54826 Enolase N-terminal domain-like
8 4 1 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
8 8 6 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
8 8 5 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
8 8 3 0 SCOP 144074 E2F-DP heterodimerization region
8 8 3 0 SCOP 140111 Endosomal sorting complex assembly domain
8 8 4 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
7 7 3 1 SCOP 56808 Ribosomal protein L1
7 6 3 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
7 7 2 1 SCOP 54999 Ribosomal protein S10
7 7 2 1 SCOP 75620 Release factor
7 7 2 1 SCOP 53748 Phosphoglycerate kinase
7 7 6 1 SCOP 82649 SufE/NifU
7 7 4 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
7 6 4 1 SCOP 55068 Peptide methionine sulfoxide reductase
7 7 2 1 SCOP 51351 Triosephosphate isomerase (TIM)
7 7 4 1 SCOP 50715 Ribosomal protein L25-like
7 7 2 0 SCOP 144122 Tim10-like
7 7 2 0 SCOP 140718 Mediator hinge subcomplex-like
7 7 2 1 SCOP 55144 LigT-like
7 4 3 1 SCOP 69645 Arp2/3 complex subunits
7 7 1 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
7 7 2 0 SCOP 50044 SH3-domain
7 7 5 0 SCOP 58113 Apolipoprotein A-I
7 7 5 1 SCOP 52016 LeuD/IlvD-like
7 7 1 0 SCOP 55331 Tautomerase/MIF
7 7 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
7 6 3 1 SCOP 54626 Chalcone isomerase
7 7 3 1 SCOP 54984 eEF-1beta-like
7 7 5 1 SCOP 55186 ThrRS/AlaRS common domain
7 7 5 1 SCOP 46548 alpha-helical ferredoxin
7 6 3 1 SCOP 55895 Ribonuclease Rh-like
7 7 3 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
7 7 4 1 SCOP 48225 Seven-hairpin glycosidases
7 7 5 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
7 7 3 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
7 3 3 1 SCOP 51101 Mannose-binding lectins
7 4 2 1 SCOP 55945 TATA-box binding protein-like
7 7 3 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
7 7 3 0 SCOP 47895 Transducin (alpha subunit), insertion domain
7 7 3 1 SCOP 88688 Families 57/38 glycoside transferase middle domain
7 7 3 0 SCOP 54368 Glutamine synthetase, N-terminal domain
7 7 2 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
7 7 5 0 SCOP 143503 PUG domain-like
7 7 3 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
6 6 3 1 SCOP 53790 Tetrapyrrole methylase
6 6 3 0 SCOP 143800 L28p-like
6 6 2 1 SCOP 50324 Inorganic pyrophosphatase
6 6 2 1 SCOP 52161 Ribosomal protein L13
6 6 3 1 SCOP 142695 RibA-like
6 6 3 0 SCOP 101908 Putative isomerase YbhE
6 6 1 1 SCOP 82282 Homocysteine S-methyltransferase
6 6 2 1 SCOP 55239 RuBisCO, small subunit
6 6 1 0 SCOP 103256 Hypothetical protein TM0160
6 6 3 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
6 6 3 1 SCOP 64167 SurE-like
6 6 3 0 SCOP 55154 CYTH-like phosphatases
6 6 3 1 SCOP 50993 Peptidase/esterase 'gauge' domain
6 5 4 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
6 6 1 0 SCOP 55287 RPB5-like RNA polymerase subunit
6 4 3 1 SCOP 55979 DNA clamp
6 6 4 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
6 6 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
6 6 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
6 6 4 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
6 6 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
6 6 1 1 SCOP 118359 Expressed protein At2g23090/F21P24.15
6 3 1 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
6 6 2 1 SCOP 63570 PABC (PABP) domain
6 6 1 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
6 6 2 0 SCOP 57277 Granulin repeat
6 6 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
6 6 2 1 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
6 6 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
5 5 1 1 SCOP 47973 Ribosomal protein S7
5 5 4 1 SCOP 53597 Dihydrofolate reductase-like
5 5 2 0 SCOP 47060 S15/NS1 RNA-binding domain
5 5 3 0 SCOP 82657 BolA-like
5 5 2 0 SCOP 46561 Ribosomal protein L29 (L29p)
5 5 1 0 SCOP 52042 Ribosomal protein L32e
5 5 4 1 SCOP 53328 Formyltransferase
5 5 2 1 SCOP 56322 ADC synthase
5 5 1 0 SCOP 52499 Isochorismatase-like hydrolases
5 5 3 2 SCOP 52972 ITPase-like
5 5 1 1 SCOP 161077 Photosystem II antenna protein-like
5 5 3 2 SCOP 54913 GlnB-like
5 5 2 1 SCOP 101112 Oxygen-evolving enhancer protein 3,
5 5 3 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
5 5 2 0 SCOP 143456 VC0467-like
5 5 2 1 SCOP 55826 YbaK/ProRS associated domain
5 5 3 1 SCOP 103025 Folate-binding domain
5 5 1 1 SCOP 56925 OMPA-like
5 5 1 1 SCOP 142535 AF0625-like
5 5 3 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
5 3 2 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
5 5 4 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
5 5 3 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
5 3 3 1 SCOP 51971 Nucleotide-binding domain
5 5 2 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
5 5 3 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
5 5 2 1 SCOP 50621 Alanine racemase C-terminal domain-like
5 5 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
5 5 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
5 5 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
5 5 3 0 SCOP 117289 Nucleoporin domain
5 5 3 0 SCOP 57845 B-box zinc-binding domain
5 5 5 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
5 5 4 0 SCOP 143791 DUSP-like
5 5 1 0 SCOP 57095 Scorpion toxin-like
5 5 1 0 SCOP 50386 STI-like
5 3 3 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
5 5 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
5 5 4 0 SCOP 75553 Smc hinge domain
5 5 1 1 SCOP 89942 eEF1-gamma domain
5 5 2 0 SCOP 54556 Chitinase insertion domain
5 5 2 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
5 5 2 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
5 5 2 1 SCOP 63887 P-domain of calnexin/calreticulin
5 5 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
5 5 3 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
5 5 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
4 4 2 0 SCOP 54843 Ribosomal protein L22
4 4 2 1 SCOP 54686 Ribosomal protein L16p/L10e
4 2 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
4 3 2 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
4 4 2 0 SCOP 89360 HesB-like domain
4 4 4 1 SCOP 51713 tRNA-guanine transglycosylase
4 4 1 1 SCOP 56770 HydA/Nqo6-like
4 4 1 0 SCOP 54575 Ribosomal protein L31e
4 4 1 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
4 4 1 0 SCOP 103456 Preprotein translocase SecE subunit
4 4 2 1 SCOP 56019 The spindle assembly checkpoint protein mad2
4 4 2 0 SCOP 53639 AraD/HMP-PK domain-like
4 4 2 0 SCOP 47694 Cytochrome c oxidase subunit h
4 4 1 0 SCOP 103486 V-type ATP synthase subunit C
4 4 3 1 SCOP 53800 Chelatase
4 4 2 1 SCOP 46458 Globin-like
4 3 2 1 SCOP 81558 Photosystem I subunits PsaA/PsaB
4 4 2 0 SCOP 50090 Electron transport accessory proteins
4 4 1 1 SCOP 81483 Bacterial photosystem II reaction centre, L and M subunits
4 4 2 1 SCOP 53795 PEP carboxykinase-like
4 4 3 0 SCOP 141571 Pentapeptide repeat-like
4 2 1 0 SCOP 46955 Putative DNA-binding domain
4 4 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
4 4 1 0 SCOP 158615 RbcX-like
4 4 2 0 SCOP 89550 PHP domain-like
4 4 2 1 SCOP 48600 Chorismate mutase II
4 4 3 1 SCOP 110069 ApaG-like
4 4 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
4 4 1 0 SCOP 69786 YggU-like
4 4 2 0 SCOP 64076 MTH938-like
4 4 1 0 SCOP 46950 Double-stranded DNA-binding domain
4 3 2 1 SCOP 56574 Serpins
4 4 1 0 SCOP 116820 Rps17e-like
4 4 4 0 SCOP 53092 Creatinase/prolidase N-terminal domain
4 4 2 1 SCOP 56003 Molybdenum cofactor-binding domain
4 4 2 0 SCOP 46589 tRNA-binding arm
4 4 4 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
4 4 2 0 SCOP 48619 Phospholipase A2, PLA2
4 4 1 1 SCOP 48537 Phospholipase C/P1 nuclease
4 4 3 1 SCOP 142921 WGR domain-like
4 4 4 1 SCOP 56719 Type II DNA topoisomerase
4 4 2 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
4 4 2 0 SCOP 55658 L9 N-domain-like
4 4 1 0 SCOP 49265 Fibronectin type III
4 4 2 1 SCOP 68923 PEP carboxykinase N-terminal domain
4 2 1 0 SCOP 53681 Aspartate/glutamate racemase
4 4 1 1 SCOP 56371 Ribosome inactivating proteins (RIP)
4 3 2 1 SCOP 56042 PurM C-terminal domain-like
4 4 3 0 SCOP 101904 GyrA/ParC C-terminal domain-like
4 4 2 0 SCOP 143548 Serine metabolism enzymes domain
4 4 2 1 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
4 3 2 1 SCOP 55326 PurM N-terminal domain-like
4 4 3 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
4 4 2 1 SCOP 47741 CO dehydrogenase ISP C-domain like
4 4 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
4 3 2 0 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
4 4 3 1 SCOP 81837 BEACH domain
4 4 3 1 SCOP 47446 Signal peptide-binding domain
4 4 3 0 SCOP 55271 DNA repair protein MutS, domain I
4 4 2 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
4 4 3 0 SCOP 158573 GINS helical bundle-like
4 4 1 1 SCOP 109993 VPS9 domain
4 2 2 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
4 4 2 0 SCOP 117839 WWE domain
4 4 3 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
4 4 2 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
4 4 2 0 SCOP 50916 Rap30/74 interaction domains
4 4 2 0 SCOP 140612 EB1 dimerisation domain-like
4 4 2 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
4 4 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
4 4 2 0 SCOP 81502 ISP transmembrane anchor
4 4 3 0 SCOP 53150 DNA repair protein MutS, domain II
4 4 3 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
3 3 2 1 SCOP 52166 Ribosomal protein L4
3 3 2 1 SCOP 55282 RL5-like
3 3 2 0 SCOP 64182 DHH phosphoesterases
3 3 1 1 SCOP 55194 Ribosome recycling factor, RRF
3 3 2 1 SCOP 51730 FAD-linked oxidoreductase
3 3 2 1 SCOP 55205 EPT/RTPC-like
3 2 2 1 SCOP 55298 YjgF-like
3 3 1 1 SCOP 56796 Dehydroquinate synthase-like
3 3 2 0 SCOP 54995 Ribosomal protein S6
3 3 2 0 SCOP 144217 CSL zinc finger
3 3 2 1 SCOP 69500 DTD-like
3 3 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
3 3 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
3 3 2 1 SCOP 48439 Protein prenylyltransferase
3 3 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
3 3 2 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
3 3 1 0 SCOP 69618 HemD-like
3 3 1 1 SCOP 63562 RPB6/omega subunit-like
3 3 2 1 SCOP 101960 Stabilizer of iron transporter SufD
3 3 1 0 SCOP 58100 Bacterial hemolysins
3 3 3 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
3 3 1 1 SCOP 56349 DNA breaking-rejoining enzymes
3 3 1 0 SCOP 103441 PetM subunit of the cytochrome b6f complex
3 3 3 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
3 3 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
3 3 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
3 3 2 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
3 3 2 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
3 3 2 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
3 2 2 0 SCOP 50346 PRC-barrel domain
3 3 2 1 SCOP 111321 AF1104-like
3 3 1 0 SCOP 143437 THUMP domain-like
3 3 2 1 SCOP 102462 Peptidyl-tRNA hydrolase II
3 3 2 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
3 3 3 0 SCOP 50370 Ricin B-like lectins
3 2 2 0 SCOP 89372 Fucose-specific lectin
3 3 1 0 SCOP 158745 LanC-like
3 3 2 0 SCOP 160059 PriA/YqbF domain
3 3 2 0 SCOP 141673 MOSC N-terminal domain-like
3 3 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
3 3 2 1 SCOP 110111 Ctag/Cox11
3 3 1 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
3 3 2 0 SCOP 81891 Poly A polymerase C-terminal region-like
3 3 1 0 SCOP 68912 Rho N-terminal domain-like
3 3 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
3 3 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
3 3 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
3 3 1 1 SCOP 55637 Cell cycle regulatory proteins
3 3 1 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
3 3 2 0 SCOP 55550 SH2 domain
3 3 1 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
3 3 2 0 SCOP 102735 Trigger factor ribosome-binding domain
3 3 2 1 SCOP 141493 Allene oxide cyclase-like
3 2 2 1 SCOP 143975 IlvD/EDD N-terminal domain-like
3 3 2 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
3 3 1 0 SCOP 116742 eIF2alpha middle domain-like
3 3 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
3 3 1 1 SCOP 101152 Mob1/phocein
3 3 1 0 SCOP 116846 MIT domain
3 3 1 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
3 3 2 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
3 3 1 1 SCOP 109920 Hypothetical protein At3g22680
3 3 3 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
3 3 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
3 3 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
3 3 2 0 SCOP 47040 Kix domain of CBP (creb binding protein)
3 3 1 0 SCOP 103243 KA1-like
3 3 2 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
3 3 1 0 SCOP 160527 V-type ATPase subunit E-like
3 3 1 0 SCOP 140427 VPS28 C-terminal domain-like
3 3 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
3 3 3 0 SCOP 64586 C-terminal domain of ProRS
3 3 1 0 SCOP 55653 Ribosomal protein L9 C-domain
3 3 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
3 3 2 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
2 2 2 0 SCOP 56731 DNA primase core
2 2 2 0 SCOP 48013 NusB-like
2 2 1 1 SCOP 56420 Peptide deformylase
2 2 1 0 SCOP 57840 Ribosomal protein L36
2 2 2 1 SCOP 64263 Prokaryotic ribosomal protein L17
2 2 1 0 SCOP 143034 L35p-like
2 2 1 0 SCOP 141091 L21p-like
2 2 1 1 SCOP 51658 Xylose isomerase-like
2 2 2 0 SCOP 54565 Ribosomal protein S16
2 2 1 1 SCOP 51283 dUTPase-like
2 2 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
2 2 1 1 SCOP 54285 MoaD/ThiS
2 2 1 0 SCOP 117991 YbeD/HP0495-like
2 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
2 2 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
2 2 1 1 SCOP 102886 Coproporphyrinogen III oxidase
2 2 1 0 SCOP 111278 SSo0622-like
2 2 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
2 2 2 0 SCOP 55248 PCD-like
2 2 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
2 2 1 0 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
2 2 1 0 SCOP 110849 ParB/Sulfiredoxin
2 2 2 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 2 1 SCOP 56529 FAH
2 2 1 1 SCOP 46924 RNA polymerase subunit RPB10
2 2 1 0 SCOP 46988 Tubulin chaperone cofactor A
2 2 1 0 SCOP 143447 AMMECR1-like
2 2 1 2 SCOP 55909 Pentein
2 2 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
2 2 2 0 SCOP 141734 HisI-like
2 2 2 1 SCOP 81342 Transmembrane di-heme cytochromes
2 2 1 1 SCOP 57662 Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
2 2 1 1 SCOP 64234 Photosystem I subunit PsaD
2 2 1 1 SCOP 81536 Subunit III of photosystem I reaction centre, PsaF
2 2 2 0 SCOP 81563 Photosystem I reaction center subunit X, PsaK
2 2 1 1 SCOP 101546 ASF1-like
2 2 2 0 SCOP 56601 beta-lactamase/transpeptidase-like
2 2 2 0 SCOP 103642 Sec-C motif
2 2 1 1 SCOP 51998 PFL-like glycyl radical enzymes
2 2 1 0 SCOP 55718 SCP-like
2 2 2 0 SCOP 142754 NadA-like
2 2 1 1 SCOP 56266 DmpA/ArgJ-like
2 2 2 0 SCOP 82771 GIY-YIG endonuclease
2 2 2 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
2 2 2 0 SCOP 158997 Trm112p-like
2 2 2 1 SCOP 51391 Thiamin phosphate synthase
2 2 2 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
2 2 2 0 SCOP 89095 GatB/YqeY motif
2 2 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
2 2 1 1 SCOP 158694 UraD-Like
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 2 2 0 SCOP 56821 Prismane protein-like
2 2 2 0 SCOP 50486 FMT C-terminal domain-like
2 2 1 0 SCOP 160104 Acetoacetate decarboxylase-like
2 2 2 1 SCOP 100939 SPOC domain-like
2 2 1 1 SCOP 89562 RraA-like
2 2 1 1 SCOP 74784 Translin
2 2 1 0 SCOP 160350 Rnp2-like
2 2 1 0 SCOP 160374 RplX-like
2 2 2 0 SCOP 143865 CorA soluble domain-like
2 2 1 0 SCOP 158832 Tex N-terminal region-like
2 2 1 0 SCOP 82093 Heme chaperone CcmE
2 2 1 1 SCOP 82114 Riboflavin kinase-like
2 2 2 0 SCOP 69304 Tricorn protease N-terminal domain
2 2 1 0 SCOP 63825 YWTD domain
2 2 2 1 SCOP 142877 EndoU-like
2 2 1 0 SCOP 118116 DNA mismatch repair protein MutL
2 2 2 0 SCOP 81336 F1F0 ATP synthase subunit A
2 2 2 0 SCOP 49464 Carboxypeptidase regulatory domain-like
2 2 1 0 SCOP 90257 Myosin rod fragments
2 2 1 0 SCOP 56436 C-type lectin-like
2 2 2 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
2 2 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
2 2 1 0 SCOP 56037 PheT/TilS domain
2 2 1 1 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
2 2 1 1 SCOP 110019 ERO1-like
2 2 2 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
2 2 2 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
2 2 1 0 SCOP 141259 CarD-like
2 2 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 2 2 0 SCOP 140860 Pseudo ankyrin repeat-like
2 2 1 0 SCOP 47933 ERP29 C domain-like
2 2 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
2 2 2 0 SCOP 54752 RecA protein, C-terminal domain
2 2 2 1 SCOP 74924 Cap-Gly domain
2 2 1 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
2 2 2 0 SCOP 110221 AbfB domain
2 2 1 0 SCOP 69000 FAD-dependent thiol oxidase
2 2 1 1 SCOP 82109 MIR domain
2 2 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
2 2 1 0 SCOP 161065 ATP synthase D chain-like
2 2 2 0 SCOP 47672 Transferrin receptor-like dimerisation domain
2 2 2 0 SCOP 140106 Calcyclin-binding protein-like
2 2 1 1 SCOP 143875 ERH-like
2 2 2 0 SCOP 50911 Mannose 6-phosphate receptor domain
2 2 1 1 SCOP 51649 RuBisCo, C-terminal domain
2 2 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
2 2 2 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
2 2 1 1 SCOP 50989 Clathrin heavy-chain terminal domain
2 2 2 1 SCOP 81886 Helical scaffold and wing domains of SecA
2 2 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
2 2 1 1 SCOP 88802 Pre-PUA domain
2 2 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
2 2 2 0 SCOP 49441 Cytochrome f, large domain
2 2 1 1 SCOP 144256 TSP9-like
2 2 1 1 SCOP 116768 DNA-binding domain of EIN3-like
2 2 1 0 SCOP 143517 TRCF domain-like
2 2 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
2 2 2 1 SCOP 81767 Pre-protein crosslinking domain of SecA
2 2 1 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
2 2 2 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
2 2 2 0 SCOP 158230 PRP4-like
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 0 SCOP 82607 YbaB-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 1 SCOP 82549 DAK1/DegV-like
1 1 1 1 SCOP 75625 YebC-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
1 1 1 0 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 0 SCOP 69765 IpsF-like
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 56935 Porins
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 1 SCOP 55387 Frataxin/Nqo15-like
1 1 1 0 SCOP 81321 Family A G protein-coupled receptor-like
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 0 SCOP 51645 Malate synthase G
1 1 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
1 1 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
1 1 1 0 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 81568 Photosystem I reaction center subunit XI, PsaL
1 1 1 0 SCOP 161084 MAPEG domain-like
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 1 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 1 SCOP 118196 YaeB-like
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 53807 "Helical backbone" metal receptor
1 1 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 1 SCOP 143990 YbiA-like
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 1 SCOP 56762 HydB/Nqo4-like
1 1 1 0 SCOP 46894 C-terminal effector domain of the bipartite response regulators
1 1 1 0 SCOP 159501 EreA/ChaN-like
1 1 1 0 SCOP 140663 TTHA0068-like
1 1 1 1 SCOP 54111 Urease, gamma-subunit
1 1 1 1 SCOP 51278 Urease, beta-subunit
1 1 1 1 SCOP 143081 BB1717-like
1 1 1 1 SCOP 53213 LigB-like
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 1 SCOP 160909 ATP12-like
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 0 SCOP 48295 TrpR-like
1 1 1 1 SCOP 110581 Indigoidine synthase A-like
1 1 1 0 SCOP 101801 Surface presentation of antigens (SPOA)
1 1 1 0 SCOP 142338 CofD-like
1 1 1 1 SCOP 101473 DhaL-like
1 1 1 1 SCOP 51219 TRAP-like
1 1 1 0 SCOP 141130 Acetamidase/Formamidase-like
1 1 1 0 SCOP 142764 YgbK-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 50939 Sialidases
1 1 1 0 SCOP 48695 Multiheme cytochromes
1 1 1 0 SCOP 158710 PSPTO4464-like
1 1 1 0 SCOP 160631 SMI1/KNR4-like
1 1 1 1 SCOP 69695 SRP19
1 1 1 0 SCOP 63867 MoeA C-terminal domain-like
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 69318 Integrin alpha N-terminal domain
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 0 SCOP 141255 YccV-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 69989 C-terminal domain of PLC-beta
1 1 1 0 SCOP 102110 (2r)-phospho-3-sulfolactate synthase ComA
1 1 1 0 SCOP 55234 Cyanase C-terminal domain
1 1 1 1 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 116726 TrkA C-terminal domain-like
1 1 1 1 SCOP 48056 Di-copper centre-containing domain
1 1 1 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 0 SCOP 81585 PsbU/PolX domain-like
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 117074 Hypothetical protein PA1324
1 1 1 1 SCOP 53920 Fe-only hydrogenase
1 1 1 1 SCOP 140869 GUN4-like
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
1 1 1 0 SCOP 63418 MurE/MurF N-terminal domain
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 0 SCOP 144284 Sec2 N-terminal region
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 0 SCOP 54452 MHC antigen-recognition domain
1 1 1 0 SCOP 49854 Spermadhesin, CUB domain
1 1 1 1 SCOP 89817 Mago nashi protein
1 1 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 0 SCOP 48097 Regulator of G-protein signaling, RGS
1 1 1 0 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
1 1 1 1 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 57414 Hairpin loop containing domain-like
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 1 SCOP 101233 PWI domain
1 1 1 0 SCOP 50809 XRCC4, N-terminal domain
1 1 1 1 SCOP 54966 RuBisCO, large subunit, small (N-terminal) domain
1 1 1 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
1 1 1 0 SCOP 82895 TSP-1 type 1 repeat
1 1 1 0 SCOP 57424 LDL receptor-like module
1 1 1 0 SCOP 81872 BRCA2 helical domain
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 0 SCOP 47031 Second domain of FERM
1 1 1 0 SCOP 69848 LCCL domain
1 1 1 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
1 1 1 0 SCOP 101420 C-terminal domain of Ku80
1 1 1 1 SCOP 160897 Taf5 N-terminal domain-like
1 1 1 0 SCOP 140586 Dcp2 domain-like
1 1 1 0 SCOP 103431 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
1 1 1 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
1 1 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
1 1 1 0 SCOP 47055 TAF(II)230 TBP-binding fragment
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 81878 BRCA2 tower domain

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Head morphogenesis protein gp7
SCOP superfamily DPY module
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily Hypothetical protein Yml108w
SCOP superfamily YajQ-like
SCOP superfamily MTH1187/YkoF-like
SCOP superfamily Amyloid beta a4 protein copper binding domain (domain 2)
SCOP superfamily Dodecin-like
SCOP superfamily CoA-transferase family III (CaiB/BaiF)
SCOP superfamily Collagen-binding domain
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily Soluble domain of poliovirus core protein 3a
SCOP superfamily Receptor-binding domain of short tail fibre protein gp12
SCOP superfamily ssDNA viruses
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Tumor suppressor gene product Apc
SCOP superfamily Apical membrane antigen 1
SCOP superfamily MesJ substrate recognition domain-like
SCOP superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain
SCOP superfamily GckA/TtuD-like
SCOP superfamily BAH domain
SCOP superfamily Myosin phosphatase inhibitor 17kDa protein, CPI-17
SCOP superfamily beta-catenin-interacting protein ICAT
SCOP superfamily Nucleotidyltransferase substrate binding subunit/domain
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Subunit VIII of photosystem I reaction centre, PsaI
SCOP superfamily Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Bacterial ba3 type cytochrome c oxidase subunit IIa
SCOP superfamily Cytochrome c oxidase subunit II-like, transmembrane region
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Small-conductance potassium channel
SCOP superfamily Adenylylcyclase toxin (the edema factor)
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
SCOP superfamily V-region of surface antigen I/II (SA I/II, PAC)
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily Colicin E3 receptor domain
SCOP superfamily Eea1 homodimerisation domain
SCOP superfamily Urease metallochaperone UreE, C-terminal domain
SCOP superfamily Cell wall binding repeat
SCOP superfamily Nucleoplasmin-like core domain
SCOP superfamily Bcr-Abl oncoprotein oligomerization domain
SCOP superfamily RecG, N-terminal domain
SCOP superfamily FAT domain of focal adhesion kinase
SCOP superfamily F1 ATPase inhibitor, IF1, C-terminal domain
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Phase 1 flagellin
SCOP superfamily YopH tyrosine phosphatase N-terminal domain
SCOP superfamily Hsp33 domain
SCOP superfamily SirA-like
SCOP superfamily Ribonuclease domain of colicin E3
SCOP superfamily SAND domain-like
SCOP superfamily Nicotinic receptor ligand binding domain-like
SCOP superfamily Ganglioside M2 (gm2) activator
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Frizzled cysteine-rich domain
SCOP superfamily RNA polymerase subunits
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Virus ectodomain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Fibritin
SCOP superfamily Multimerization domain of the phosphoprotein from sendai virus
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Inhibitor of apoptosis (IAP) repeat
SCOP superfamily Ada DNA repair protein, N-terminal domain (N-Ada 10)
SCOP superfamily Metallothionein
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Hypothetical protein MTH1184
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily Carboxypeptidase inhibitor
SCOP superfamily Serine protease inhibitors
SCOP superfamily Complement control module/SCR domain
SCOP superfamily Trefoil
SCOP superfamily Kringle-like
SCOP superfamily Leech antihemostatic proteins
SCOP superfamily EGF/Laminin
SCOP superfamily Colipase-like
SCOP superfamily Growth factor receptor domain
SCOP superfamily omega toxin-like
SCOP superfamily Insulin-like
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Colicin
SCOP superfamily Upper collar protein gp10 (connector protein)
SCOP superfamily Replication terminator protein (Tus)
SCOP superfamily Baseplate structural protein gp11
SCOP superfamily Nitric oxide (NO) synthase oxygenase domain
SCOP superfamily Fibrinogen C-terminal domain-like
SCOP superfamily SMAD MH1 domain
SCOP superfamily Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
SCOP superfamily Phoshotransferase/anion transport protein
SCOP superfamily tRNA-intron endonuclease N-terminal domain-like
SCOP superfamily Formylmethanofuran:tetrahydromethanopterin formyltransferase
SCOP superfamily Acylphosphatase/BLUF domain-like
SCOP superfamily Viral DNA-binding domain
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
SCOP superfamily DNA-binding domain of Mlu1-box binding protein MBP1
SCOP superfamily Staphylokinase/streptokinase
SCOP superfamily Prion-like
SCOP superfamily RNase A-like
SCOP superfamily Microbial ribonucleases
SCOP superfamily FucI/AraA N-terminal and middle domains
SCOP superfamily PTS system fructose IIA component-like
SCOP superfamily Resolvase-like
SCOP superfamily B12-dependent dehydatase associated subunit
SCOP superfamily Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
SCOP superfamily MurCD N-terminal domain
SCOP superfamily Cobalamin (vitamin B12)-dependent enzymes
SCOP superfamily TolB, C-terminal domain
SCOP superfamily Thermostable phytase (3-phytase)
SCOP superfamily beta-Barrel protease inhibitors
SCOP superfamily Herpes virus serine proteinase, assemblin
SCOP superfamily Agglutinin
SCOP superfamily Cytokine
SCOP superfamily CheW-like
SCOP superfamily N-terminal domains of the minor coat protein g3p
SCOP superfamily Myosin S1 fragment, N-terminal domain
SCOP superfamily Baculovirus p35 protein
SCOP superfamily Soluble secreted chemokine inhibitor, VCCI
SCOP superfamily ENV polyprotein, receptor-binding domain
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily PHM/PNGase F
SCOP superfamily Rab geranylgeranyltransferase alpha-subunit, insert domain
SCOP superfamily Cna protein B-type domain
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily Invasin/intimin cell-adhesion fragments
SCOP superfamily CBD9-like
SCOP superfamily PKD domain
SCOP superfamily Immunoglobulin
SCOP superfamily Moesin tail domain
SCOP superfamily Fe-only hydrogenase smaller subunit
SCOP superfamily FinO-like
SCOP superfamily Tetraspanin
SCOP superfamily Peridinin-chlorophyll protein
SCOP superfamily Serum albumin-like
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily gene 59 helicase assembly protein
SCOP superfamily Cytochrome c oxidase subunit E
SCOP superfamily Bacterial muramidases
SCOP superfamily Lipovitellin-phosvitin complex, superhelical domain
SCOP superfamily Transcription factor STAT-4 N-domain
SCOP superfamily DBL homology domain (DH-domain)
SCOP superfamily Scaffolding protein gpD of bacteriophage procapsid
SCOP superfamily FliG
SCOP superfamily DEATH domain
SCOP superfamily Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
SCOP superfamily Bacteriocin AS-48
SCOP superfamily Apolipophorin-III
SCOP superfamily Chemotaxis receptor methyltransferase CheR, N-terminal domain
SCOP superfamily STAT
SCOP superfamily A DNA-binding domain in eukaryotic transcription factors
SCOP superfamily Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
SCOP superfamily Retrovirus capsid dimerization domain-like
SCOP superfamily 4-helical cytokines
SCOP superfamily Bacterial GAP domain
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily Hemerythrin-like
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Apolipoprotein
SCOP superfamily Diol dehydratase, gamma subunit
SCOP superfamily Smac/diablo
SCOP superfamily Enzyme IIa from lactose specific PTS, IIa-lac
SCOP superfamily Spectrin repeat
SCOP superfamily DNA helicase RuvA subunit, C-terminal domain
SCOP superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily Eukaryotic DNA topoisomerase I, dispensable insert domain
SCOP superfamily HR1 repeat
SCOP superfamily DNA polymerase III theta subunit-like
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily RILP dimerisation region
SCOP superfamily T-antigen specific domain-like
SCOP superfamily E7 C-terminal domain-like
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily YfgJ-like
SCOP superfamily MetI-like
SCOP superfamily SNF-like
SCOP superfamily ATP synthase B chain-like
SCOP superfamily PsbZ-like
SCOP superfamily Cytochrome b559 subunits
SCOP superfamily Photosystem II reaction center protein I, PsbI
SCOP superfamily Viral glycoprotein ectodomain-like
SCOP superfamily SSO1389-like
SCOP superfamily VPA0735-like
SCOP superfamily Phosphoprotein oligomerization domain-like
SCOP superfamily YNR034W-A-like
SCOP superfamily BRK domain-like
SCOP superfamily BLRF2-like
SCOP superfamily NosL/MerB-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily NRDP1 C-terminal domain-like
SCOP superfamily PrpR receptor domain-like
SCOP superfamily Cgl1923-like
SCOP superfamily TBP-interacting protein-like
SCOP superfamily XCC0632-like
SCOP superfamily WSSV envelope protein-like
SCOP superfamily Smr-associated domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily MG296-like
SCOP superfamily TerB-like
SCOP superfamily MtlR-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily TAFH domain-like
SCOP superfamily YqcC-like
SCOP superfamily Bacillus cereus metalloprotein-like
SCOP superfamily HP0062-like
SCOP superfamily occludin/ELL-like
SCOP superfamily Eferin C-derminal domain-like
SCOP superfamily MPN010-like
SCOP superfamily Vanabin-like
SCOP superfamily Heme iron utilization protein-like
SCOP superfamily ImpE-like
SCOP superfamily Thermophilic metalloprotease-like
SCOP superfamily FdhE-like
SCOP superfamily CofE-like
SCOP superfamily YwmB-like
SCOP superfamily Phage tail protein-like
SCOP superfamily GlcG-like
SCOP superfamily PHP14-like
SCOP superfamily FwdE-like
SCOP superfamily TM1622-like
SCOP superfamily Transposase IS200-like
SCOP superfamily Nqo5-like
SCOP superfamily TTHA1013/TTHA0281-like
SCOP superfamily YjbR-like
SCOP superfamily CinA-like
SCOP superfamily MFPT repeat-like
SCOP superfamily FimD N-terminal domain-like
SCOP superfamily Extracellular hemoglobin linker subunit, receptor domain
SCOP superfamily BH3618-like
SCOP superfamily Agglutinin HPA-like
SCOP superfamily Hermes dimerisation domain
SCOP superfamily DNA terminal protein
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily TROVE domain-like
SCOP superfamily USP8 N-terminal domain-like
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily Rv1873-like
SCOP superfamily Phage replication organizer domain
SCOP superfamily IpaD-like
SCOP superfamily YfmB-like
SCOP superfamily YoaC-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily YozE-like
SCOP superfamily Type III secretion system domain
SCOP superfamily HIV integrase-binding domain
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily FlgN-like
SCOP superfamily LemA-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily Coronavirus NSP7-like
SCOP superfamily SPy1572-like
SCOP superfamily Synuclein
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Connexin43
SCOP superfamily Proton glutamate symport protein
SCOP superfamily GTF2I-like repeat
SCOP superfamily TM1631-like
SCOP superfamily YfbU-like
SCOP superfamily RNA-binding protein She2p
SCOP superfamily XseB-like
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily Pollen allergen ole e 6
SCOP superfamily OmpH-like
SCOP superfamily VP4 membrane interaction domain
SCOP superfamily Tsx-like channel
SCOP superfamily Mitochondrial ATP synthase coupling factor 6
SCOP superfamily Recombination protein RecR
SCOP superfamily Sporulation related repeat
SCOP superfamily TmoB-like
SCOP superfamily Hypothetical protein MTH677
SCOP superfamily Coronavirus RNA-binding domain
SCOP superfamily GDNF receptor-like
SCOP superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
SCOP superfamily DinB/YfiT-like putative metalloenzymes
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily PhoU-like
SCOP superfamily HBS1-like domain
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily G protein-binding domain
SCOP superfamily Plexin repeat
SCOP superfamily Autotransporter
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Virulence-associated V antigen
SCOP superfamily Antivirulence factor
SCOP superfamily Hypothetical protein HI1480
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily Hypothetical protein YgiW
SCOP superfamily Dextranase, N-terminal domain
SCOP superfamily Stathmin
SCOP superfamily Hypothetical protein MTH393
SCOP superfamily YcfC-like
SCOP superfamily Invasion protein A (SipA) , C-terminal actin binding domain
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like
SCOP superfamily Flagellar export chaperone FliS
SCOP superfamily Staphylocoagulase
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily Plant proteinase inhibitors
SCOP superfamily Kazal-type serine protease inhibitors

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.