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  Home > Genomes > Superfamily assignments for Capsella rubella v183


Capsella rubella v183 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 28447 total
18221 (64 %) with assignment
417 average length
45 % amino acid coverage
Domains: 26223 total
956 unique superfamilies
809 unique families
290 average length
27.4 average superfamily size
96 % formed by duplication
Domain combinations: 950 domain pairs
3204 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
1416 1189 203 11 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
1228 1221 115 4 SCOP 56112 Protein kinase-like (PK-like)
871 870 56 0 SCOP 81383 F-box domain
745 607 112 2 SCOP 52058 L domain-like
710 616 95 3 SCOP 57850 RING/U-box
505 415 96 10 SCOP 48371 ARM repeat
492 453 34 4 SCOP 46689 Homeodomain-like
464 327 59 1 SCOP 54928 RNA-binding domain, RBD
432 403 60 0 SCOP 52047 RNI-like
430 340 57 2 SCOP 48452 TPR-like
425 106 55 1 SCOP 57889 Cysteine-rich domain
370 362 43 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
358 357 17 8 SCOP 53474 alpha/beta-Hydrolases
313 271 26 17 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
295 270 51 1 SCOP 50978 WD40 repeat-like
285 250 34 5 SCOP 52833 Thioredoxin-like
249 246 6 1 SCOP 48264 Cytochrome P450
235 228 6 0 SCOP 103473 MFS general substrate transporter
231 143 54 5 SCOP 50249 Nucleic acid-binding proteins
211 207 36 8 SCOP 51445 (Trans)glycosidases
205 107 11 2 SCOP 49503 Cupredoxins
204 192 29 1 SCOP 47473 EF-hand
200 141 44 4 SCOP 54236 Ubiquitin-like
197 185 52 4 SCOP 46785 "Winged helix" DNA-binding domain
196 195 11 5 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
194 187 17 1 SCOP 117281 Kelch motif
185 120 29 1 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
182 166 12 1 SCOP 54171 DNA-binding domain
179 122 21 1 SCOP 101936 DNA-binding pseudobarrel domain
176 139 23 5 SCOP 51905 FAD/NAD(P)-binding domain
172 172 8 3 SCOP 51126 Pectin lyase-like
172 172 5 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
171 170 30 8 SCOP 56784 HAD-like
166 135 26 0 SCOP 57667 beta-beta-alpha zinc fingers
165 163 11 2 SCOP 51197 Clavaminate synthase-like
151 149 26 4 SCOP 53098 Ribonuclease H-like
149 148 14 5 SCOP 53448 Nucleotide-diphospho-sugar transferases
148 106 11 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
144 144 24 9 SCOP 54001 Cysteine proteinases
141 140 23 1 SCOP 46565 Chaperone J-domain
141 140 5 2 SCOP 47699 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
140 135 30 1 SCOP 48403 Ankyrin repeat
139 118 43 1 SCOP 57903 FYVE/PHD zinc finger
135 111 18 1 SCOP 49599 TRAF domain-like
133 133 3 0 SCOP 55455 SRF-like
130 130 7 1 SCOP 101148 Plant invertase/pectin methylesterase inhibitor
125 119 6 1 SCOP 101941 NAC domain
123 123 18 3 SCOP 49899 Concanavalin A-like lectins/glucanases
121 97 15 0 SCOP 55961 Bet v1-like
119 52 28 0 SCOP 90229 CCCH zinc finger
117 115 25 0 SCOP 54695 POZ domain
114 65 10 1 SCOP 47954 Cyclin-like
112 57 17 4 SCOP 53067 Actin-like ATPase domain
110 96 24 0 SCOP 81901 HCP-like
110 103 28 0 SCOP 52200 Toll/Interleukin receptor TIR domain
105 103 14 0 SCOP 50965 Galactose oxidase, central domain
99 96 8 5 SCOP 53383 PLP-dependent transferases
95 79 6 1 SCOP 118290 WRKY DNA-binding domain
94 39 10 1 SCOP 51101 Mannose-binding lectins
94 94 14 0 SCOP 54277 CAD & PB1 domains
93 93 8 1 SCOP 81606 PP2C-like
93 93 3 1 SCOP 48113 Heme-dependent peroxidases
88 65 11 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
87 87 4 1 SCOP 52266 SGNH hydrolase
86 86 3 0 SCOP 57959 Leucine zipper domain
84 59 25 3 SCOP 49785 Galactose-binding domain-like
84 40 24 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
79 42 20 1 SCOP 55021 ACT-like
78 78 5 2 SCOP 47113 Histone-fold
78 66 16 0 SCOP 55008 HMA, heavy metal-associated domain
77 77 20 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
77 77 6 1 SCOP 50630 Acid proteases
77 42 5 1 SCOP 90123 ABC transporter transmembrane region
75 71 33 8 SCOP 54211 Ribosomal protein S5 domain 2-like
74 74 9 4 SCOP 56300 Metallo-dependent phosphatases
72 46 22 0 SCOP 57756 Retrovirus zinc finger-like domains
71 71 5 1 SCOP 103506 Mitochondrial carrier
71 71 27 3 SCOP 50729 PH domain-like
69 69 5 7 SCOP 51182 RmlC-like cupins
66 66 9 2 SCOP 54495 UBC-like
66 62 13 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
66 35 4 2 SCOP 53901 Thiolase-like
65 65 10 1 SCOP 47616 GST C-terminal domain-like
60 44 7 1 SCOP 50129 GroES-like
60 58 19 2 SCOP 82199 SET domain
58 47 7 3 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
58 58 9 1 SCOP 52743 Subtilisin-like
58 52 28 0 SCOP 46934 UBA-like
56 54 18 4 SCOP 52374 Nucleotidylyl transferase
55 55 6 3 SCOP 48576 Terpenoid synthases
54 51 8 2 SCOP 49764 HSP20-like chaperones
54 54 9 2 SCOP 56176 FAD-binding/transporter-associated domain-like
54 54 11 1 SCOP 81665 Calcium ATPase, transmembrane domain M
53 51 20 3 SCOP 81296 E set domains
53 53 10 1 SCOP 81653 Calcium ATPase, transduction domain A
52 50 14 1 SCOP 52172 CheY-like
51 39 12 0 SCOP 54631 CBS-domain pair
49 49 8 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
49 48 6 1 SCOP 56801 Acetyl-CoA synthetase-like
48 36 10 2 SCOP 51695 PLC-like phosphodiesterases
48 24 4 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
47 47 7 2 SCOP 48208 Six-hairpin glycosidases
47 46 11 1 SCOP 48464 ENTH/VHS domain
46 41 10 0 SCOP 81324 Voltage-gated potassium channels
46 44 7 0 SCOP 51110 alpha-D-mannose-specific plant lectins
45 44 6 1 SCOP 50182 Sm-like ribonucleoproteins
45 43 19 2 SCOP 50447 Translation proteins
45 44 19 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
44 44 20 2 SCOP 53300 vWA-like
44 28 16 0 SCOP 54768 dsRNA-binding domain-like
43 43 21 2 SCOP 55681 Class II aaRS and biotin synthetases
43 38 10 4 SCOP 52096 ClpP/crotonase
43 43 3 2 SCOP 50685 Barwin-like endoglucanases
43 37 11 2 SCOP 56219 DNase I-like
42 42 9 3 SCOP 64356 SNARE-like
42 17 3 2 SCOP 55753 Actin depolymerizing proteins
42 41 15 0 SCOP 63748 Tudor/PWWP/MBT
42 42 5 1 SCOP 74788 Cullin repeat-like
41 13 5 1 SCOP 63411 LuxS/MPP-like metallohydrolase
40 39 22 3 SCOP 88697 PUA domain-like
40 20 14 0 SCOP 90209 Ran binding protein zinc finger-like
40 20 6 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
40 22 9 0 SCOP 47762 PAH2 domain
39 25 11 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
39 36 10 0 SCOP 58038 SNARE fusion complex
39 31 9 1 SCOP 54534 FKBP-like
38 31 13 2 SCOP 52317 Class I glutamine amidotransferase-like
38 36 10 1 SCOP 50104 Translation proteins SH3-like domain
38 32 12 0 SCOP 50985 RCC1/BLIP-II
38 36 16 2 SCOP 52799 (Phosphotyrosine protein) phosphatases II
38 38 9 1 SCOP 50891 Cyclophilin-like
38 37 5 1 SCOP 103511 Chlorophyll a-b binding protein
38 26 8 0 SCOP 82153 FAS1 domain
38 38 1 0 SCOP 49590 PHL pollen allergen
37 37 3 1 SCOP 81338 Aquaporin-like
37 37 6 2 SCOP 55811 Nudix
37 31 12 0 SCOP 57997 Tropomyosin
36 35 11 1 SCOP 54427 NTF2-like
36 36 9 1 SCOP 49870 Osmotin, thaumatin-like protein
35 34 6 1 SCOP 51206 cAMP-binding domain-like
35 34 7 1 SCOP 52777 CoA-dependent acyltransferases
34 34 4 0 SCOP 117856 AF0104/ALDC/Ptd012-like
33 17 5 0 SCOP 75471 YhbY-like
33 29 8 3 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
33 33 6 1 SCOP 52087 CRAL/TRIO domain
32 32 10 1 SCOP 53850 Periplasmic binding protein-like II
32 32 9 3 SCOP 74650 Galactose mutarotase-like
32 32 17 3 SCOP 81301 Nucleotidyltransferase
32 19 10 1 SCOP 55785 PYP-like sensor domain (PAS domain)
32 32 11 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
32 31 11 3 SCOP 63380 Riboflavin synthase domain-like
32 21 17 0 SCOP 52113 BRCT domain
32 32 5 0 SCOP 46938 CRAL/TRIO N-terminal domain
31 31 8 5 SCOP 51569 Aldolase
31 23 6 2 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
30 27 8 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
30 30 12 2 SCOP 56104 SAICAR synthase-like
30 26 9 1 SCOP 47095 HMG-box
30 30 7 2 SCOP 54518 Tubby C-terminal domain-like
30 18 10 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
30 30 7 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
30 30 2 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
30 30 6 3 SCOP 54373 FAD-linked reductases, C-terminal domain
30 30 2 1 SCOP 57095 Scorpion toxin-like
29 28 9 7 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
29 29 5 1 SCOP 47661 t-snare proteins
28 28 7 2 SCOP 53137 Translational machinery components
28 28 7 1 SCOP 47370 Bromodomain
27 26 6 2 SCOP 53254 Phosphoglycerate mutase-like
27 27 9 4 SCOP 53187 Zn-dependent exopeptidases
26 24 16 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
26 24 10 1 SCOP 51230 Single hybrid motif
26 16 15 0 SCOP 69065 RNase III domain-like
26 26 8 2 SCOP 52029 GroEL apical domain-like
26 25 3 0 SCOP 57429 Crambin-like
26 26 5 0 SCOP 89009 GAT-like domain
25 21 8 3 SCOP 52821 Rhodanese/Cell cycle control phosphatase
25 24 3 1 SCOP 51430 NAD(P)-linked oxidoreductase
25 24 8 2 SCOP 55315 L30e-like
25 25 6 0 SCOP 144091 Rhomboid-like
25 13 9 1 SCOP 54980 EF-G C-terminal domain-like
25 25 4 1 SCOP 81382 Skp1 dimerisation domain-like
24 22 7 2 SCOP 53271 PRTase-like
24 24 5 3 SCOP 53613 Ribokinase-like
24 24 4 3 SCOP 48150 DNA-glycosylase
24 24 1 1 SCOP 55797 PR-1-like
24 22 11 0 SCOP 50156 PDZ domain-like
24 24 10 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
23 23 4 1 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
23 22 9 3 SCOP 51161 Trimeric LpxA-like enzymes
23 23 5 0 SCOP 53822 Periplasmic binding protein-like I
23 23 13 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
23 20 12 1 SCOP 47592 SWIB/MDM2 domain
23 21 6 0 SCOP 54849 GroEL-intermediate domain like
22 22 3 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
22 22 9 1 SCOP 52954 Class II aaRS ABD-related
22 11 7 1 SCOP 56024 Phospholipase D/nuclease
22 22 5 1 SCOP 52490 Tubulin nucleotide-binding domain-like
22 22 5 4 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
22 22 3 1 SCOP 49363 Purple acid phosphatase, N-terminal domain
22 22 6 0 SCOP 57863 ArfGap/RecO-like zinc finger
22 16 9 0 SCOP 54160 Chromo domain-like
22 22 2 0 SCOP 117892 Band 7/SPFH domain
22 22 8 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
22 22 8 1 SCOP 52025 PA domain
22 22 1 1 SCOP 141562 At5g01610-like
21 20 4 0 SCOP 63829 Calcium-dependent phosphotriesterase
21 19 8 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
21 19 9 1 SCOP 50494 Trypsin-like serine proteases
21 21 9 1 SCOP 49879 SMAD/FHA domain
21 21 5 1 SCOP 140990 FtsH protease domain-like
21 15 8 0 SCOP 51045 WW domain
20 20 4 0 SCOP 57829 Zn-binding ribosomal proteins
20 20 4 1 SCOP 51395 FMN-linked oxidoreductases
20 20 6 1 SCOP 56399 ADP-ribosylation
20 19 5 1 SCOP 53955 Lysozyme-like
20 20 5 1 SCOP 48592 GroEL equatorial domain-like
20 20 3 1 SCOP 55307 Tubulin C-terminal domain-like
19 19 4 3 SCOP 55120 Pseudouridine synthase
19 19 4 1 SCOP 54292 2Fe-2S ferredoxin-like
19 17 8 0 SCOP 82171 DPP6 N-terminal domain-like
19 19 9 1 SCOP 51011 Glycosyl hydrolase domain
19 6 4 1 SCOP 53738 Phosphoglucomutase, first 3 domains
19 19 5 1 SCOP 103612 SBT domain
18 14 6 2 SCOP 53927 Cytidine deaminase-like
18 18 7 3 SCOP 100950 NagB/RpiA/CoA transferase-like
18 18 4 2 SCOP 52768 Arginase/deacetylase
18 17 9 0 SCOP 49452 Starch-binding domain-like
18 18 6 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
18 18 9 0 SCOP 81923 Double Clp-N motif
18 6 1 1 SCOP 55973 S-adenosylmethionine synthetase
18 13 7 0 SCOP 109905 Surp module (SWAP domain)
17 17 8 5 SCOP 51556 Metallo-dependent hydrolases
17 17 9 0 SCOP 103657 BAR/IMD domain-like
17 17 2 1 SCOP 51316 Mss4-like
17 17 5 2 SCOP 53720 ALDH-like
17 17 8 2 SCOP 109604 HD-domain/PDEase-like
17 17 8 3 SCOP 56672 DNA/RNA polymerases
17 17 5 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
17 17 6 1 SCOP 47576 Calponin-homology domain, CH-domain
17 15 5 3 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
17 15 6 0 SCOP 57783 Zinc beta-ribbon
17 17 10 0 SCOP 81995 beta-sandwich domain of Sec23/24
17 17 6 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
17 17 5 1 SCOP 81631 PAP/OAS1 substrate-binding domain
17 14 4 1 SCOP 118310 AN1-like Zinc finger
17 15 5 0 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
16 16 6 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
16 16 9 4 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
16 14 7 2 SCOP 53633 Carbamate kinase-like
16 16 2 1 SCOP 56655 Carbohydrate phosphatase
16 13 5 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
16 11 6 1 SCOP 55781 GAF domain-like
16 16 2 1 SCOP 55724 Mog1p/PsbP-like
16 16 6 0 SCOP 50800 PK beta-barrel domain-like
16 14 5 0 SCOP 54403 Cystatin/monellin
16 16 2 1 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
16 16 7 0 SCOP 46774 ARID-like
15 15 3 2 SCOP 47240 Ferritin-like
15 15 4 1 SCOP 102405 MCP/YpsA-like
15 15 7 0 SCOP 161111 Cation efflux protein transmembrane domain-like
15 10 4 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
15 14 3 1 SCOP 117070 LEA14-like
15 14 5 1 SCOP 75005 Arabinanase/levansucrase/invertase
15 15 3 1 SCOP 56574 Serpins
15 15 6 1 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
15 15 8 1 SCOP 101690 PAZ domain
15 3 2 0 SCOP 81698 FF domain
15 11 4 0 SCOP 57933 TAZ domain
14 14 4 5 SCOP 51366 Ribulose-phoshate binding barrel
14 14 4 1 SCOP 53649 Alkaline phosphatase-like
14 14 5 2 SCOP 52151 FabD/lysophospholipase-like
14 12 5 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
14 14 4 1 SCOP 55060 GHMP Kinase, C-terminal domain
14 14 8 0 SCOP 144232 HIT/MYND zinc finger-like
14 12 5 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
14 14 3 0 SCOP 47769 SAM/Pointed domain
14 14 3 0 SCOP 57016 Plant lectins/antimicrobial peptides
14 7 2 1 SCOP 54416 Amine oxidase N-terminal region
13 13 9 1 SCOP 55920 Creatinase/aminopeptidase
13 13 7 2 SCOP 52218 Flavoproteins
13 13 4 2 SCOP 102114 Radical SAM enzymes
13 5 3 0 SCOP 50199 Staphylococcal nuclease
13 12 5 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
13 13 3 1 SCOP 48445 14-3-3 protein
13 11 5 0 SCOP 55666 Ribonuclease PH domain 2-like
13 13 6 1 SCOP 81811 Helical domain of Sec23/24
13 13 6 0 SCOP 82919 Zn-finger domain of Sec23/24
12 12 4 1 SCOP 53784 Phosphofructokinase
12 12 2 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
12 6 2 0 SCOP 81333 F1F0 ATP synthase subunit C
12 12 7 1 SCOP 54862 4Fe-4S ferredoxins
12 12 4 1 SCOP 50475 FMN-binding split barrel
12 12 8 1 SCOP 88723 PIN domain-like
12 11 5 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
12 12 2 0 SCOP 51306 LexA/Signal peptidase
12 12 3 0 SCOP 64268 PX domain
12 12 2 0 SCOP 52091 SpoIIaa-like
12 12 3 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
12 12 3 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
12 7 4 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
12 12 4 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
12 12 4 0 SCOP 160443 SMR domain-like
12 12 8 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
12 10 8 2 SCOP 52440 PreATP-grasp domain
12 12 2 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
12 11 4 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
12 12 2 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
11 11 2 0 SCOP 144000 Oxysterol-binding protein-like
11 11 5 1 SCOP 56317 Carbon-nitrogen hydrolase
11 11 8 1 SCOP 47819 HRDC-like
11 11 2 1 SCOP 51069 Carbonic anhydrase
11 11 2 0 SCOP 54654 CI-2 family of serine protease inhibitors
11 11 2 0 SCOP 52935 PK C-terminal domain-like
11 10 7 0 SCOP 68906 SAP domain
11 10 7 1 SCOP 55277 GYF domain
10 10 3 1 SCOP 75304 Amidase signature (AS) enzymes
10 9 5 2 SCOP 54197 HIT-like
10 10 2 0 SCOP 47336 ACP-like
10 10 7 1 SCOP 75217 alpha/beta knot
10 10 3 1 SCOP 64005 Undecaprenyl diphosphate synthase
10 6 3 2 SCOP 51726 UROD/MetE-like
10 8 4 1 SCOP 56815 Sec1/munc18-like (SM) proteins
10 10 3 0 SCOP 46579 Prefoldin
10 10 4 0 SCOP 58113 Apolipoprotein A-I
10 10 5 2 SCOP 55931 Glutamine synthetase/guanido kinase
10 10 5 1 SCOP 52016 LeuD/IlvD-like
10 10 4 0 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
10 10 4 4 SCOP 52467 DHS-like NAD/FAD-binding domain
10 7 3 0 SCOP 50405 Actin-crosslinking proteins
10 10 3 0 SCOP 48019 post-AAA+ oligomerization domain-like
10 7 4 1 SCOP 158702 Sec63 N-terminal domain-like
10 10 7 1 SCOP 81271 TGS-like
10 10 4 0 SCOP 48350 GTPase activation domain, GAP
10 10 4 0 SCOP 158639 ENT-like
10 10 4 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
10 7 3 1 SCOP 47862 Saposin
10 10 4 0 SCOP 46942 Elongation factor TFIIS domain 2
10 9 2 0 SCOP 140383 BSD domain-like
9 9 4 1 SCOP 56808 Ribosomal protein L1
9 9 5 0 SCOP 55174 Alpha-L RNA-binding motif
9 9 3 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
9 9 4 1 SCOP 50715 Ribosomal protein L25-like
9 9 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
9 5 2 1 SCOP 69645 Arp2/3 complex subunits
9 9 5 1 SCOP 50022 ISP domain
9 9 3 0 SCOP 54736 ClpS-like
9 7 4 1 SCOP 50814 Lipocalins
9 9 2 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
9 9 6 0 SCOP 101898 NHL repeat
9 9 3 2 SCOP 52922 TK C-terminal domain-like
9 9 6 0 SCOP 48334 DNA repair protein MutS, domain III
9 9 1 1 SCOP 56327 LDH C-terminal domain-like
9 9 4 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
9 9 5 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
9 9 5 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
9 9 6 1 SCOP 56204 Hect, E3 ligase catalytic domain
9 9 3 0 SCOP 110942 HSP90 C-terminal domain
9 9 6 0 SCOP 109715 DEK C-terminal domain
8 8 2 0 SCOP 54570 Ribosomal protein S19
8 8 2 1 SCOP 75620 Release factor
8 8 2 1 SCOP 50324 Inorganic pyrophosphatase
8 8 3 1 SCOP 52161 Ribosomal protein L13
8 8 2 2 SCOP 48557 L-aspartase-like
8 8 4 0 SCOP 101908 Putative isomerase YbhE
8 8 1 1 SCOP 57798 Casein kinase II beta subunit
8 8 4 0 SCOP 54897 Protease propeptides/inhibitors
8 8 3 0 SCOP 161219 CHY zinc finger-like
8 8 2 1 SCOP 81340 Clc chloride channel
8 8 5 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
8 6 6 0 SCOP 47781 RuvA domain 2-like
8 8 5 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
8 8 2 1 SCOP 89124 Nop domain
8 8 2 0 SCOP 49354 PapD-like
8 8 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
8 8 1 1 SCOP 47874 Annexin
8 8 5 1 SCOP 48425 Sec7 domain
8 8 1 1 SCOP 50386 STI-like
8 8 6 0 SCOP 75553 Smc hinge domain
8 8 3 0 SCOP 161245 Zinc hairpin stack
7 7 2 1 SCOP 50193 Ribosomal protein L14
7 7 3 0 SCOP 52080 Ribosomal proteins L15p and L18e
7 7 3 0 SCOP 46946 S13-like H2TH domain
7 7 2 0 SCOP 160369 Ribosomal protein L10-like
7 7 2 0 SCOP 47060 S15/NS1 RNA-binding domain
7 7 3 0 SCOP 82657 BolA-like
7 7 3 0 SCOP 46561 Ribosomal protein L29 (L29p)
7 7 3 2 SCOP 51419 PLP-binding barrel
7 7 6 1 SCOP 52949 Macro domain-like
7 7 3 1 SCOP 48256 Citrate synthase
7 7 1 1 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
7 7 2 1 SCOP 54648 DLC
7 7 2 2 SCOP 52972 ITPase-like
7 7 2 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
7 7 1 1 SCOP 49777 PEBP-like
7 7 3 1 SCOP 55159 eIF1-like
7 7 2 0 SCOP 102712 JAB1/MPN domain
7 5 2 1 SCOP 54909 Dimeric alpha+beta barrel
7 7 2 1 SCOP 48484 Lipoxigenase
7 7 3 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
7 7 3 1 SCOP 101112 Oxygen-evolving enhancer protein 3,
7 7 4 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
7 7 6 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
7 7 3 0 SCOP 57802 Rubredoxin-like
7 7 3 1 SCOP 82704 AlbA-like
7 7 5 1 SCOP 51246 Rudiment single hybrid motif
7 7 3 0 SCOP 54106 LysM domain
7 7 6 0 SCOP 52075 Outer arm dynein light chain 1
7 7 4 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
7 7 2 1 SCOP 49998 Amine oxidase catalytic domain
7 7 5 1 SCOP 81837 BEACH domain
7 7 4 1 SCOP 49348 Clathrin adaptor appendage domain
7 7 3 0 SCOP 82708 R3H domain
7 7 3 0 SCOP 54368 Glutamine synthetase, N-terminal domain
7 7 6 0 SCOP 159042 Plus3-like
7 7 3 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
6 6 2 0 SCOP 53167 Purine and uridine phosphorylases
6 6 4 2 SCOP 53697 SIS domain
6 6 3 1 SCOP 52166 Ribosomal protein L4
6 6 2 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
6 6 2 1 SCOP 103491 Preprotein translocase SecY subunit
6 6 3 0 SCOP 143800 L28p-like
6 6 4 1 SCOP 82649 SufE/NifU
6 6 3 1 SCOP 52980 Restriction endonuclease-like
6 6 3 1 SCOP 55068 Peptide methionine sulfoxide reductase
6 6 3 1 SCOP 48613 Heme oxygenase-like
6 4 2 1 SCOP 53590 Nucleoside hydrolase
6 6 3 1 SCOP 56322 ADC synthase
6 6 5 0 SCOP 47027 Acyl-CoA binding protein
6 6 2 1 SCOP 55144 LigT-like
6 5 3 2 SCOP 54506 Diaminopimelate epimerase-like
6 6 2 0 SCOP 47072 Cysteine alpha-hairpin motif
6 6 3 0 SCOP 50044 SH3-domain
6 5 3 0 SCOP 55257 RBP11-like subunits of RNA polymerase
6 6 3 1 SCOP 143113 NAP-like
6 6 1 1 SCOP 55418 eIF4e-like
6 6 2 1 SCOP 55770 Profilin (actin-binding protein)
6 4 3 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
6 6 1 1 SCOP 111352 Ammonium transporter
6 6 4 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
6 6 3 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
6 5 2 0 SCOP 55136 Probable bacterial effector-binding domain
6 6 2 1 SCOP 54626 Chalcone isomerase
6 6 2 1 SCOP 111321 AF1104-like
6 6 4 1 SCOP 55186 ThrRS/AlaRS common domain
6 6 1 0 SCOP 55287 RPB5-like RNA polymerase subunit
6 6 2 1 SCOP 55895 Ribonuclease Rh-like
6 6 3 1 SCOP 56003 Molybdenum cofactor-binding domain
6 4 3 1 SCOP 55979 DNA clamp
6 6 2 1 SCOP 52210 Succinyl-CoA synthetase domains
6 6 2 0 SCOP 47090 PGBD-like
6 6 3 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
6 6 3 1 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
6 6 3 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
6 4 2 1 SCOP 56053 Ribosomal protein L6
6 5 3 0 SCOP 55550 SH2 domain
6 6 4 0 SCOP 158573 GINS helical bundle-like
6 6 1 0 SCOP 57196 EGF/Laminin
6 6 3 0 SCOP 63570 PABC (PABP) domain
6 6 2 0 SCOP 110004 Glycolipid transfer protein, GLTP
6 6 2 1 SCOP 75632 Cullin homology domain
6 6 3 0 SCOP 63491 BAG domain
6 5 3 0 SCOP 143791 DUSP-like
6 6 3 0 SCOP 140111 Endosomal sorting complex assembly domain
6 6 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
6 6 3 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
6 6 4 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
6 6 1 1 SCOP 63887 P-domain of calnexin/calreticulin
6 6 1 1 SCOP 116768 DNA-binding domain of EIN3-like
5 5 2 1 SCOP 54999 Ribosomal protein S10
5 5 1 1 SCOP 56047 Ribosomal protein S8
5 5 4 1 SCOP 53597 Dihydrofolate reductase-like
5 5 4 0 SCOP 110324 Ribosomal L27 protein-like
5 5 3 2 SCOP 55821 YrdC/RibB
5 5 2 0 SCOP 144122 Tim10-like
5 5 3 2 SCOP 46626 Cytochrome c
5 5 2 0 SCOP 63393 RNA polymerase subunits
5 5 2 1 SCOP 53056 beta-carbonic anhydrase, cab
5 5 2 1 SCOP 50692 ADC-like
5 5 3 0 SCOP 55154 CYTH-like phosphatases
5 5 2 1 SCOP 50993 Peptidase/esterase 'gauge' domain
5 5 2 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
5 4 4 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
5 5 3 0 SCOP 69322 Tricorn protease domain 2
5 5 4 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
5 5 3 1 SCOP 51604 Enolase C-terminal domain-like
5 5 1 1 SCOP 102462 Peptidyl-tRNA hydrolase II
5 5 4 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
5 5 2 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
5 3 2 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
5 5 2 1 SCOP 48537 Phospholipase C/P1 nuclease
5 5 2 0 SCOP 52129 Caspase-like
5 5 3 0 SCOP 55658 L9 N-domain-like
5 5 1 0 SCOP 49265 Fibronectin type III
5 5 4 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
5 5 3 1 SCOP 54826 Enolase N-terminal domain-like
5 5 4 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
5 5 3 1 SCOP 48225 Seven-hairpin glycosidases
5 5 2 0 SCOP 81891 Poly A polymerase C-terminal region-like
5 5 3 0 SCOP 143548 Serine metabolism enzymes domain
5 3 2 1 SCOP 55945 TATA-box binding protein-like
5 5 3 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
5 5 2 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
5 5 4 0 SCOP 55271 DNA repair protein MutS, domain I
5 5 1 0 SCOP 47895 Transducin (alpha subunit), insertion domain
5 2 2 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
5 5 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
5 5 3 0 SCOP 144074 E2F-DP heterodimerization region
5 5 1 0 SCOP 47050 VHP, Villin headpiece domain
5 2 2 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
5 5 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
5 4 3 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
5 5 1 1 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
5 5 2 0 SCOP 54556 Chitinase insertion domain
5 5 2 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
5 5 3 0 SCOP 64586 C-terminal domain of ProRS
5 5 2 1 SCOP 54585 Cdc48 domain 2-like
5 5 2 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
4 4 2 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
4 4 3 0 SCOP 54843 Ribosomal protein L22
4 4 2 1 SCOP 55282 RL5-like
4 4 2 1 SCOP 51730 FAD-linked oxidoreductase
4 4 2 0 SCOP 89360 HesB-like domain
4 4 2 1 SCOP 56276 S-adenosylmethionine decarboxylase
4 4 2 0 SCOP 48140 Ribosomal protein L19 (L19e)
4 3 2 1 SCOP 56634 Heme-dependent catalase-like
4 4 2 0 SCOP 140718 Mediator hinge subcomplex-like
4 4 3 1 SCOP 53328 Formyltransferase
4 4 3 1 SCOP 48439 Protein prenylyltransferase
4 4 3 1 SCOP 49329 Cu,Zn superoxide dismutase-like
4 4 1 0 SCOP 47694 Cytochrome c oxidase subunit h
4 4 2 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
4 4 2 1 SCOP 88713 Glycoside hydrolase/deacetylase
4 4 1 2 SCOP 55909 Pentein
4 4 1 1 SCOP 46458 Globin-like
4 4 2 0 SCOP 50090 Electron transport accessory proteins
4 4 1 1 SCOP 55239 RuBisCO, small subunit
4 4 3 0 SCOP 141571 Pentapeptide repeat-like
4 4 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
4 4 3 1 SCOP 53732 Aconitase iron-sulfur domain
4 4 2 1 SCOP 103025 Folate-binding domain
4 4 2 1 SCOP 74784 Translin
4 4 2 1 SCOP 54984 eEF-1beta-like
4 4 2 1 SCOP 46548 alpha-helical ferredoxin
4 4 4 0 SCOP 53092 Creatinase/prolidase N-terminal domain
4 4 3 0 SCOP 46589 tRNA-binding arm
4 2 1 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
4 4 4 0 SCOP 50960 TolB, C-terminal domain
4 4 3 0 SCOP 48619 Phospholipase A2, PLA2
4 4 2 0 SCOP 63825 YWTD domain
4 4 2 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
4 4 3 1 SCOP 56719 Type II DNA topoisomerase
4 4 2 0 SCOP 90257 Myosin rod fragments
4 4 3 0 SCOP 160059 PriA/YqbF domain
4 4 2 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
4 4 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
4 4 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
4 4 4 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
4 4 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
4 4 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
4 4 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
4 4 1 1 SCOP 47741 CO dehydrogenase ISP C-domain like
4 2 1 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
4 4 1 1 SCOP 141493 Allene oxide cyclase-like
4 4 2 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
4 4 4 1 SCOP 69000 FAD-dependent thiol oxidase
4 4 2 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
4 2 2 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
4 4 1 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
4 4 3 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
4 4 2 1 SCOP 88688 Families 57/38 glycoside transferase middle domain
4 4 2 0 SCOP 57277 Granulin repeat
4 4 3 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
4 4 3 0 SCOP 103243 KA1-like
4 4 2 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
4 4 2 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
4 4 3 0 SCOP 50916 Rap30/74 interaction domains
4 4 4 0 SCOP 143503 PUG domain-like
4 4 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
4 4 2 0 SCOP 160219 AMPKBI-like
4 4 2 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
4 4 2 0 SCOP 101238 XPC-binding domain
3 3 2 1 SCOP 53790 Tetrapyrrole methylase
3 3 2 2 SCOP 54686 Ribosomal protein L16p/L10e
3 3 2 1 SCOP 64263 Prokaryotic ribosomal protein L17
3 3 2 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
3 3 2 1 SCOP 53748 Phosphoglycerate kinase
3 3 2 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
3 3 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
3 3 2 1 SCOP 52313 Ribosomal protein S2
3 3 1 1 SCOP 142695 RibA-like
3 2 2 1 SCOP 55298 YjgF-like
3 3 2 0 SCOP 55129 Ribosomal protein L30p/L7e
3 3 3 0 SCOP 54995 Ribosomal protein S6
3 3 1 0 SCOP 52042 Ribosomal protein L32e
3 3 1 0 SCOP 54575 Ribosomal protein L31e
3 3 2 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
3 3 1 0 SCOP 52499 Isochorismatase-like hydrolases
3 3 2 1 SCOP 56019 The spindle assembly checkpoint protein mad2
3 3 1 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
3 3 1 1 SCOP 82282 Homocysteine S-methyltransferase
3 3 2 1 SCOP 56529 FAH
3 3 1 1 SCOP 46924 RNA polymerase subunit RPB10
3 3 2 1 SCOP 52788 Phosphotyrosine protein phosphatases I
3 3 1 1 SCOP 101546 ASF1-like
3 3 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
3 3 2 1 SCOP 51998 PFL-like glycyl radical enzymes
3 3 1 0 SCOP 55331 Tautomerase/MIF
3 3 2 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
3 3 1 1 SCOP 56349 DNA breaking-rejoining enzymes
3 3 1 0 SCOP 103256 Hypothetical protein TM0160
3 3 1 0 SCOP 89550 PHP domain-like
3 3 2 2 SCOP 54913 GlnB-like
3 2 2 2 SCOP 53218 Molybdenum cofactor biosynthesis proteins
3 3 1 0 SCOP 159501 EreA/ChaN-like
3 3 2 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
3 3 1 1 SCOP 143081 BB1717-like
3 3 1 0 SCOP 158997 Trm112p-like
3 3 1 1 SCOP 53213 LigB-like
3 3 2 0 SCOP 143456 VC0467-like
3 3 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
3 3 1 1 SCOP 48600 Chorismate mutase II
3 3 1 0 SCOP 102588 LmbE-like
3 3 3 0 SCOP 101386 all-alpha NTP pyrophosphatases
3 3 2 0 SCOP 69786 YggU-like
3 3 1 1 SCOP 89562 RraA-like
3 3 2 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
3 3 1 1 SCOP 102198 Putative cyclase
3 3 1 0 SCOP 116820 Rps17e-like
3 3 1 0 SCOP 160374 RplX-like
3 3 2 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
3 3 3 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
3 3 3 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
3 3 2 0 SCOP 50370 Ricin B-like lectins
3 2 2 0 SCOP 69304 Tricorn protease N-terminal domain
3 3 3 1 SCOP 142921 WGR domain-like
3 3 1 0 SCOP 158745 LanC-like
3 3 1 0 SCOP 88633 Positive stranded ssRNA viruses
3 3 3 1 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
3 3 3 0 SCOP 141673 MOSC N-terminal domain-like
3 3 2 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
3 2 2 1 SCOP 56042 PurM C-terminal domain-like
3 3 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
3 3 2 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
3 2 2 1 SCOP 55326 PurM N-terminal domain-like
3 3 2 0 SCOP 117289 Nucleoporin domain
3 3 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
3 3 1 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
3 3 1 0 SCOP 47794 Rad51 N-terminal domain-like
3 3 1 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
3 3 2 0 SCOP 102735 Trigger factor ribosome-binding domain
3 3 3 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
3 3 2 1 SCOP 47446 Signal peptide-binding domain
3 3 2 0 SCOP 82061 BAH domain
3 3 1 1 SCOP 101152 Mob1/phocein
3 3 1 1 SCOP 118359 Expressed protein At2g23090/F21P24.15
3 3 3 1 SCOP 101233 PWI domain
3 3 3 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
3 3 1 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
3 3 1 0 SCOP 160527 V-type ATPase subunit E-like
3 3 2 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
3 3 1 1 SCOP 50989 Clathrin heavy-chain terminal domain
3 3 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
3 3 2 0 SCOP 140612 EB1 dimerisation domain-like
3 3 1 0 SCOP 55653 Ribosomal protein L9 C-domain
3 3 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
3 3 2 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
3 3 2 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
3 3 2 0 SCOP 53150 DNA repair protein MutS, domain II
3 3 3 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
2 2 2 0 SCOP 56731 DNA primase core
2 2 2 0 SCOP 48013 NusB-like
2 2 2 1 SCOP 47973 Ribosomal protein S7
2 2 1 1 SCOP 56420 Peptide deformylase
2 2 1 0 SCOP 82607 YbaB-like
2 2 1 0 SCOP 143034 L35p-like
2 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
2 2 1 0 SCOP 141091 L21p-like
2 2 1 1 SCOP 82549 DAK1/DegV-like
2 2 1 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
2 2 2 1 SCOP 51351 Triosephosphate isomerase (TIM)
2 2 1 1 SCOP 55194 Ribosome recycling factor, RRF
2 2 1 0 SCOP 54565 Ribosomal protein S16
2 2 1 1 SCOP 54285 MoaD/ThiS
2 2 2 1 SCOP 55205 EPT/RTPC-like
2 2 1 1 SCOP 56796 Dehydroquinate synthase-like
2 2 2 0 SCOP 144217 CSL zinc finger
2 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
2 2 1 1 SCOP 102886 Coproporphyrinogen III oxidase
2 2 1 0 SCOP 103456 Preprotein translocase SecE subunit
2 2 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 1 0 SCOP 55248 PCD-like
2 2 2 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
2 2 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
2 2 2 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 1 0 SCOP 48662 Ribosomal protein L39e
2 2 1 0 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
2 2 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
2 2 1 0 SCOP 103486 V-type ATP synthase subunit C
2 2 2 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 2 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
2 2 1 0 SCOP 46988 Tubulin chaperone cofactor A
2 2 2 0 SCOP 69618 HemD-like
2 2 1 1 SCOP 63562 RPB6/omega subunit-like
2 2 2 1 SCOP 53800 Chelatase
2 2 1 1 SCOP 101960 Stabilizer of iron transporter SufD
2 2 2 0 SCOP 141734 HisI-like
2 2 1 1 SCOP 64234 Photosystem I subunit PsaD
2 1 1 0 SCOP 49478 Cna protein B-type domain
2 2 1 0 SCOP 161084 MAPEG domain-like
2 2 1 1 SCOP 51717 Dihydropteroate synthetase-like
2 2 1 1 SCOP 53795 PEP carboxykinase-like
2 2 2 0 SCOP 103642 Sec-C motif
2 1 1 0 SCOP 46955 Putative DNA-binding domain
2 2 2 0 SCOP 58100 Bacterial hemolysins
2 2 1 0 SCOP 158615 RbcX-like
2 2 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
2 2 2 0 SCOP 101744 Rof/RNase P subunit-like
2 2 2 1 SCOP 64167 SurE-like
2 2 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
2 2 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
2 2 2 1 SCOP 51391 Thiamin phosphate synthase
2 2 2 1 SCOP 55826 YbaK/ProRS associated domain
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 2 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
2 2 1 1 SCOP 101473 DhaL-like
2 2 1 1 SCOP 51219 TRAP-like
2 2 1 0 SCOP 159659 Cgl1923-like
2 2 2 0 SCOP 141130 Acetamidase/Formamidase-like
2 2 2 0 SCOP 64076 MTH938-like
2 2 1 1 SCOP 56925 OMPA-like
2 2 1 0 SCOP 48695 Multiheme cytochromes
2 2 2 1 SCOP 100939 SPOC domain-like
2 2 2 0 SCOP 50346 PRC-barrel domain
2 2 1 0 SCOP 143437 THUMP domain-like
2 2 2 0 SCOP 158832 Tex N-terminal region-like
2 2 2 0 SCOP 69318 Integrin alpha N-terminal domain
2 2 1 0 SCOP 141255 YccV-like
2 2 1 0 SCOP 118116 DNA mismatch repair protein MutL
2 2 1 1 SCOP 51971 Nucleotide-binding domain
2 2 2 0 SCOP 49464 Carboxypeptidase regulatory domain-like
2 2 1 0 SCOP 144206 NOB1 zinc finger-like
2 2 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
2 1 1 0 SCOP 53681 Aspartate/glutamate racemase
2 2 1 0 SCOP 56436 C-type lectin-like
2 2 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
2 2 1 0 SCOP 50621 Alanine racemase C-terminal domain-like
2 2 1 1 SCOP 110019 ERO1-like
2 2 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
2 2 1 0 SCOP 110836 Hypothetical protein SAV1430
2 2 1 1 SCOP 55637 Cell cycle regulatory proteins
2 2 1 0 SCOP 75420 YhbC-like, N-terminal domain
2 2 2 0 SCOP 54752 RecA protein, C-terminal domain
2 2 2 0 SCOP 74924 Cap-Gly domain
2 2 1 0 SCOP 116742 eIF2alpha middle domain-like
2 2 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
2 2 2 0 SCOP 57845 B-box zinc-binding domain
2 2 1 1 SCOP 109993 VPS9 domain
2 2 2 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
2 2 1 0 SCOP 161065 ATP synthase D chain-like
2 2 1 1 SCOP 140102 ISY1 domain-like
2 2 1 0 SCOP 47672 Transferrin receptor-like dimerisation domain
2 2 2 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 2 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
2 2 2 0 SCOP 50911 Mannose 6-phosphate receptor domain
2 2 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
2 2 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
2 2 1 1 SCOP 89942 eEF1-gamma domain
2 2 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
2 2 2 1 SCOP 81886 Helical scaffold and wing domains of SecA
2 2 2 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
2 2 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
2 2 2 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
2 2 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
2 2 1 0 SCOP 81502 ISP transmembrane anchor
2 2 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
2 2 2 1 SCOP 81767 Pre-protein crosslinking domain of SecA
2 2 1 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
2 2 2 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
2 2 2 0 SCOP 158230 PRP4-like
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 1 SCOP 52141 Uracil-DNA glycosylase-like
1 1 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 0 SCOP 64182 DHH phosphoesterases
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 1 SCOP 51658 Xylose isomerase-like
1 1 1 1 SCOP 75625 YebC-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 0 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 103263 Chorismate synthase, AroC
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 52121 Lumazine synthase
1 1 1 0 SCOP 117991 YbeD/HP0495-like
1 1 1 1 SCOP 55387 Frataxin/Nqo15-like
1 1 1 0 SCOP 81321 Family A G protein-coupled receptor-like
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 142897 TFB5-like
1 1 1 0 SCOP 111278 SSo0622-like
1 1 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 0 SCOP 51645 Malate synthase G
1 1 1 0 SCOP 53639 AraD/HMP-PK domain-like
1 1 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
1 1 1 0 SCOP 110849 ParB/Sulfiredoxin
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
1 1 1 1 SCOP 81342 Transmembrane di-heme cytochromes
1 1 1 1 SCOP 57662 Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
1 1 1 1 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 81536 Subunit III of photosystem I reaction centre, PsaF
1 1 1 0 SCOP 81563 Photosystem I reaction center subunit X, PsaK
1 1 1 1 SCOP 81568 Photosystem I reaction center subunit XI, PsaL
1 1 1 1 SCOP 81483 Bacterial photosystem II reaction centre, L and M subunits
1 1 1 1 SCOP 161077 Photosystem II antenna protein-like
1 1 1 0 SCOP 161025 Photosystem II 10 kDa phosphoprotein PsbH
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 0 SCOP 56601 beta-lactamase/transpeptidase-like
1 1 1 0 SCOP 55718 SCP-like
1 1 1 1 SCOP 118196 YaeB-like
1 1 1 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 0 SCOP 142754 NadA-like
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 53807 "Helical backbone" metal receptor
1 1 1 0 SCOP 103441 PetM subunit of the cytochrome b6f complex
1 1 1 1 SCOP 143990 YbiA-like
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 140663 TTHA0068-like
1 1 1 1 SCOP 54111 Urease, gamma-subunit
1 1 1 1 SCOP 51278 Urease, beta-subunit
1 1 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
1 1 1 1 SCOP 158694 UraD-Like
1 1 1 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 1 SCOP 160909 ATP12-like
1 1 1 0 SCOP 110069 ApaG-like
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 1 SCOP 110581 Indigoidine synthase A-like
1 1 1 0 SCOP 56821 Prismane protein-like
1 1 1 0 SCOP 142338 CofD-like
1 1 1 1 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 142764 YgbK-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 50939 Sialidases
1 1 1 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
1 1 1 0 SCOP 160104 Acetoacetate decarboxylase-like
1 1 1 0 SCOP 158710 PSPTO4464-like
1 1 1 0 SCOP 160631 SMI1/KNR4-like
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 1 SCOP 142535 AF0625-like
1 1 1 0 SCOP 160350 Rnp2-like
1 1 1 0 SCOP 69695 SRP19
1 1 1 0 SCOP 63867 MoeA C-terminal domain-like
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 143865 CorA soluble domain-like
1 1 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
1 1 1 0 SCOP 82093 Heme chaperone CcmE
1 1 1 0 SCOP 55608 Homing endonucleases
1 1 1 1 SCOP 82114 Riboflavin kinase-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 102110 (2r)-phospho-3-sulfolactate synthase ComA
1 1 1 0 SCOP 55234 Cyanase C-terminal domain
1 1 1 1 SCOP 142877 EndoU-like
1 1 1 1 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 49384 Carbohydrate-binding domain
1 1 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 0 SCOP 46966 Spectrin repeat
1 1 1 0 SCOP 81585 PsbU/PolX domain-like
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 0 SCOP 117074 Hypothetical protein PA1324
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 53920 Fe-only hydrogenase
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 1 SCOP 101904 GyrA/ParC C-terminal domain-like
1 1 1 1 SCOP 140869 GUN4-like
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 63418 MurE/MurF N-terminal domain
1 1 1 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
1 1 1 0 SCOP 141259 CarD-like
1 1 1 0 SCOP 82861 Mechanosensitive channel protein MscS (YggB), transmembrane region
1 1 1 0 SCOP 140860 Pseudo ankyrin repeat-like
1 1 1 0 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
1 1 1 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 110221 AbfB domain
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 89817 Mago nashi protein
1 1 1 1 SCOP 82109 MIR domain
1 1 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 0 SCOP 116846 MIT domain
1 1 1 0 SCOP 48097 Regulator of G-protein signaling, RGS
1 1 1 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
1 1 1 0 SCOP 50084 Myosin S1 fragment, N-terminal domain
1 1 1 1 SCOP 143875 ERH-like
1 1 1 0 SCOP 57414 Hairpin loop containing domain-like
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 50809 XRCC4, N-terminal domain
1 1 1 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
1 1 1 0 SCOP 88645 ssDNA viruses
1 1 1 0 SCOP 100897 Plant proteinase inhibitors
1 1 1 1 SCOP 109920 Hypothetical protein At3g22680
1 1 1 0 SCOP 47040 Kix domain of CBP (creb binding protein)
1 1 1 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
1 1 1 0 SCOP 140427 VPS28 C-terminal domain-like
1 1 1 0 SCOP 81872 BRCA2 helical domain
1 1 1 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
1 1 1 0 SCOP 47031 Second domain of FERM
1 1 1 1 SCOP 88802 Pre-PUA domain
1 1 1 0 SCOP 140996 Hermes dimerisation domain
1 1 1 0 SCOP 63763 SAND domain-like
1 1 1 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
1 1 1 0 SCOP 101420 C-terminal domain of Ku80
1 1 1 1 SCOP 160897 Taf5 N-terminal domain-like
1 1 1 0 SCOP 140586 Dcp2 domain-like
1 1 1 0 SCOP 144256 TSP9-like
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
1 1 1 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
1 1 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 102741 Obg GTP-binding protein C-terminal domain
1 1 1 0 SCOP 47055 TAF(II)230 TBP-binding fragment
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 81878 BRCA2 tower domain

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Head morphogenesis protein gp7
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily Hypothetical protein TM0875
SCOP superfamily Hypothetical protein VC0424
SCOP superfamily Fucose-specific lectin
SCOP superfamily Collagen-binding domain
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily TorD-like
SCOP superfamily Tumor suppressor gene product Apc
SCOP superfamily Apical membrane antigen 1
SCOP superfamily MesJ substrate recognition domain-like
SCOP superfamily GIY-YIG endonuclease
SCOP superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain
SCOP superfamily GckA/TtuD-like
SCOP superfamily Orange carotenoid protein, N-terminal domain
SCOP superfamily Myosin phosphatase inhibitor 17kDa protein, CPI-17
SCOP superfamily Crustacean CHH/MIH/GIH neurohormone
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Photosystem I subunits PsaA/PsaB
SCOP superfamily Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Bacterial aa3 type cytochrome c oxidase subunit IV
SCOP superfamily Cytochrome c oxidase subunit II-like, transmembrane region
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Small-conductance potassium channel
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Siroheme synthase middle domains-like
SCOP superfamily Rotavirus NSP2 fragment, C-terminal domain
SCOP superfamily Dipeptidyl peptidase I (cathepsin C), exclusion domain
SCOP superfamily Aconitase B, N-terminal domain
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Head and neck region of the ectodomain of NDV fusion glycoprotein
SCOP superfamily NSP3 homodimer
SCOP superfamily LCCL domain
SCOP superfamily Cloacin translocation domain
SCOP superfamily Cell wall binding repeat
SCOP superfamily Phage fibre proteins
SCOP superfamily Nucleoplasmin-like core domain
SCOP superfamily Anti-sigma factor AsiA
SCOP superfamily Bcr-Abl oncoprotein oligomerization domain
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Phase 1 flagellin
SCOP superfamily DNA-binding domain of intron-encoded endonucleases
SCOP superfamily SirA-like
SCOP superfamily Methuselah ectodomain
SCOP superfamily Nicotinic receptor ligand binding domain-like
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Frizzled cysteine-rich domain
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Fibritin
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Inhibitor of apoptosis (IAP) repeat
SCOP superfamily Metallothionein
SCOP superfamily Hypothetical protein MTH1184
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily Carboxypeptidase inhibitor
SCOP superfamily Heparin-binding domain from vascular endothelial growth factor
SCOP superfamily Serine protease inhibitors
SCOP superfamily Methylamine dehydrogenase, L chain
SCOP superfamily Trefoil
SCOP superfamily LDL receptor-like module
SCOP superfamily Snake toxin-like
SCOP superfamily Amb V allergen
SCOP superfamily Midkine
SCOP superfamily Colipase-like
SCOP superfamily Growth factor receptor domain
SCOP superfamily Plant inhibitors of proteinases and amylases
SCOP superfamily Insulin-like
SCOP superfamily Anthrax protective antigen
SCOP superfamily Viral glycoprotein, central and dimerisation domains
SCOP superfamily Lipovitellin-phosvitin complex; beta-sheet shell regions
SCOP superfamily Leukocidin-like
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily HydB/Nqo4-like
SCOP superfamily Replication terminator protein (Tus)
SCOP superfamily Fibrinogen C-terminal domain-like
SCOP superfamily A heparin-binding domain
SCOP superfamily SRCR-like
SCOP superfamily Ribosome inactivating proteins (RIP)
SCOP superfamily Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
SCOP superfamily Monooxygenase (hydroxylase) regulatory protein
SCOP superfamily DNA topoisomerase I domain
SCOP superfamily 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
SCOP superfamily HPr-like
SCOP superfamily Origin of replication-binding domain, RBD-like
SCOP superfamily Cell division protein MinE topological specificity domain
SCOP superfamily Pepsin inhibitor-3
SCOP superfamily Formylmethanofuran:tetrahydromethanopterin formyltransferase
SCOP superfamily Nucleotide cyclase
SCOP superfamily CheY-binding domain of CheA
SCOP superfamily DNA damage-inducible protein DinI
SCOP superfamily SecB-like
SCOP superfamily MHC antigen-recognition domain
SCOP superfamily Interleukin 8-like chemokines
SCOP superfamily Prion-like
SCOP superfamily RNase A-like
SCOP superfamily His-Me finger endonucleases
SCOP superfamily Glutaminase/Asparaginase
SCOP superfamily FucI/AraA N-terminal and middle domains
SCOP superfamily HybD-like
SCOP superfamily Resolvase-like
SCOP superfamily RuBisCo, C-terminal domain
SCOP superfamily Regulatory protein AraC
SCOP superfamily Insect cysteine-rich antifreeze protein
SCOP superfamily beta-Roll
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily Vitelline membrane outer protein-I (VMO-I)
SCOP superfamily Outer surface protein
SCOP superfamily Tachylectin-2
SCOP superfamily beta-Barrel protease inhibitors
SCOP superfamily Avidin/streptavidin
SCOP superfamily Agglutinin
SCOP superfamily Cytokine
SCOP superfamily CheW-like
SCOP superfamily TIMP-like
SCOP superfamily Hyaluronate lyase-like, C-terminal domain
SCOP superfamily Spermadhesin, CUB domain
SCOP superfamily TNF-like
SCOP superfamily Ecotin, trypsin inhibitor
SCOP superfamily Group II dsDNA viruses VP
SCOP superfamily alpha-Amylase inhibitor tendamistat
SCOP superfamily Cytochrome f, large domain
SCOP superfamily p53-like transcription factors
SCOP superfamily Alpha-macroglobulin receptor domain
SCOP superfamily CBD9-like
SCOP superfamily Transglutaminase, two C-terminal domains
SCOP superfamily Immunoglobulin
SCOP superfamily Moesin tail domain
SCOP superfamily Tetraspanin
SCOP superfamily Fungal elicitin
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily Cytochrome c oxidase subunit E
SCOP superfamily Lipovitellin-phosvitin complex, superhelical domain
SCOP superfamily Uteroglobin-like
SCOP superfamily Transcription factor STAT-4 N-domain
SCOP superfamily Di-copper centre-containing domain
SCOP superfamily FliG
SCOP superfamily GntR ligand-binding domain-like
SCOP superfamily DEATH domain
SCOP superfamily Retroviral matrix proteins
SCOP superfamily Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
SCOP superfamily Anaphylotoxins (complement system)
SCOP superfamily STAT
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
SCOP superfamily 4-helical cytokines
SCOP superfamily Bacterial GAP domain
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily TMV-like viral coat proteins
SCOP superfamily Cytochromes
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Apolipoprotein
SCOP superfamily T4 endonuclease V
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily C-terminal UvrC-binding domain of UvrB
SCOP superfamily HR1 repeat
SCOP superfamily GreA transcript cleavage protein, N-terminal domain
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily RILP dimerisation region
SCOP superfamily T-antigen specific domain-like
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily YfgJ-like
SCOP superfamily MetI-like
SCOP superfamily ATP synthase B chain-like
SCOP superfamily Poly(A) polymerase catalytic subunit-like
SCOP superfamily PH0156-like
SCOP superfamily Api92-like
SCOP superfamily FlhC-like
SCOP superfamily gpW/gp25-like
SCOP superfamily BB2672-like
SCOP superfamily NMB0513-like
SCOP superfamily BLRF2-like
SCOP superfamily BH3703-like
SCOP superfamily NosL/MerB-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily NRDP1 C-terminal domain-like
SCOP superfamily YdhG-like
SCOP superfamily YdgH-like
SCOP superfamily CdCA1 repeat-like
SCOP superfamily CobE/GbiG C-terminal domain-like
SCOP superfamily TBP-interacting protein-like
SCOP superfamily FomD-like
SCOP superfamily HIN-2000 domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily AGR C 984p-like
SCOP superfamily TerB-like
SCOP superfamily Sama2622-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily FLJ32549 domain-like
SCOP superfamily DsbB-like
SCOP superfamily Ta0600-like
SCOP superfamily Bacillus cereus metalloprotein-like
SCOP superfamily HP0062-like
SCOP superfamily TM1646-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily MPN010-like
SCOP superfamily Vanabin-like
SCOP superfamily ImpE-like
SCOP superfamily FdhE-like
SCOP superfamily FwdE-like
SCOP superfamily TM1622-like
SCOP superfamily Transposase IS200-like
SCOP superfamily Nqo5-like
SCOP superfamily YjbR-like
SCOP superfamily ComB-like
SCOP superfamily CinA-like
SCOP superfamily Atu1913-like
SCOP superfamily CalX-like
SCOP superfamily Topoisomerase V catalytic domain-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily TROVE domain-like
SCOP superfamily USP8 N-terminal domain-like
SCOP superfamily Rhabdovirus nucleoprotein-like
SCOP superfamily RUN domain-like
SCOP superfamily AF0941-like
SCOP superfamily IpaD-like
SCOP superfamily YfmB-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily FlgN-like
SCOP superfamily TM0693-like
SCOP superfamily BAS1536-like
SCOP superfamily MAST3 pre-PK domain-like
SCOP superfamily LemA-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily Vng1086c-like
SCOP superfamily MxiH-like
SCOP superfamily Rabenosyn-5 Rab-binding domain-like
SCOP superfamily SPy1572-like
SCOP superfamily Calcyclin-binding protein-like
SCOP superfamily Synuclein
SCOP superfamily Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Connexin43
SCOP superfamily Proton glutamate symport protein
SCOP superfamily TM1457-like
SCOP superfamily YehU-like
SCOP superfamily WWE domain
SCOP superfamily GTF2I-like repeat
SCOP superfamily TM1631-like
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily RNA-binding protein She2p
SCOP superfamily XseB-like
SCOP superfamily DNA methylase specificity domain
SCOP superfamily TrkA C-terminal domain-like
SCOP superfamily Fzo-like conserved region
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Resistin
SCOP superfamily Pollen allergen ole e 6
SCOP superfamily OmpH-like
SCOP superfamily Tsx-like channel
SCOP superfamily Recombination protein RecR
SCOP superfamily Hemolytic lectin CEL-III, C-terminal domain
SCOP superfamily Bacillus phage protein
SCOP superfamily Hypothetical protein PF0899
SCOP superfamily Sporulation related repeat
SCOP superfamily Glycerate kinase I
SCOP superfamily TTHA0583/YokD-like
SCOP superfamily Toprim domain
SCOP superfamily BTV NS2-like ssRNA-binding domain
SCOP superfamily Hypothetical protein MG354
SCOP superfamily I/LWEQ domain
SCOP superfamily A middle domain of Talin 1
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily PhoU-like
SCOP superfamily HBS1-like domain
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily G protein-binding domain
SCOP superfamily Plexin repeat
SCOP superfamily Autotransporter
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Oligosaccharyltransferase subunit ost4p
SCOP superfamily Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
SCOP superfamily Antivirulence factor
SCOP superfamily Roadblock/LC7 domain
SCOP superfamily Holliday junction resolvase RusA
SCOP superfamily CheC-like
SCOP superfamily Cell division protein ZapA-like
SCOP superfamily Colicin D/E5 nuclease domain
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily Sema domain
SCOP superfamily Apyrase
SCOP superfamily YceI-like
SCOP superfamily Hypothetical protein YgiW
SCOP superfamily Dextranase, N-terminal domain
SCOP superfamily Stathmin
SCOP superfamily P40 nucleoprotein
SCOP superfamily YcfC-like
SCOP superfamily Flavivirus capsid protein C
SCOP superfamily Flagellar export chaperone FliS
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily Kazal-type serine protease inhibitors

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.