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  Home > Genomes > Superfamily assignments for Naegleria gruberi


Naegleria gruberi superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria; Naegleria gruberi

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 15753 total
9232 (59 %) with assignment
491 average length
37 % amino acid coverage
Domains: 13179 total
843 unique superfamilies
569 unique families
309 average length
15.6 average superfamily size
94 % formed by duplication
Domain combinations: 846 domain pairs
2785 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
1037 918 140 11 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
553 539 137 2 SCOP 56112 Protein kinase-like (PK-like)
506 439 59 0 SCOP 52047 RNI-like
303 212 65 2 SCOP 48452 TPR-like
302 248 83 10 SCOP 48371 ARM repeat
286 284 67 0 SCOP 48097 Regulator of G-protein signaling, RGS
278 252 69 1 SCOP 50978 WD40 repeat-like
272 272 79 0 SCOP 81383 F-box domain
265 149 28 3 SCOP 53067 Actin-like ATPase domain
242 240 40 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
225 167 81 1 SCOP 101898 NHL repeat
224 184 43 0 SCOP 50985 RCC1/BLIP-II
190 188 28 9 SCOP 53474 alpha/beta-Hydrolases
190 186 39 1 SCOP 55073 Nucleotide cyclase
173 152 65 0 SCOP 54695 POZ domain
171 162 54 1 SCOP 48403 Ankyrin repeat
130 83 29 1 SCOP 81901 HCP-like
128 109 55 2 SCOP 57850 RING/U-box
123 112 31 1 SCOP 47473 EF-hand
118 115 19 10 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
117 117 32 9 SCOP 54001 Cysteine proteinases
113 78 29 3 SCOP 54236 Ubiquitin-like
109 105 34 1 SCOP 52058 L domain-like
106 93 21 2 SCOP 52833 Thioredoxin-like
99 68 33 1 SCOP 54928 RNA-binding domain, RBD
98 88 40 0 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
92 78 51 0 SCOP 63829 Calcium-dependent phosphotriesterase
83 83 27 0 SCOP 55961 Bet v1-like
82 70 29 4 SCOP 51905 FAD/NAD(P)-binding domain
80 76 26 0 SCOP 55785 PYP-like sensor domain (PAS domain)
80 74 47 2 SCOP 50729 PH domain-like
77 69 43 0 SCOP 63825 YWTD domain
74 62 31 4 SCOP 50249 Nucleic acid-binding proteins
74 74 27 1 SCOP 53300 vWA-like
73 73 7 0 SCOP 57701 Zn2/Cys6 DNA-binding domain
72 66 38 0 SCOP 117281 Kelch motif
70 69 12 1 SCOP 48264 Cytochrome P450
69 69 12 2 SCOP 56300 Metallo-dependent phosphatases
69 56 19 0 SCOP 46689 Homeodomain-like
67 67 17 5 SCOP 56784 HAD-like
67 56 24 0 SCOP 51126 Pectin lyase-like
64 60 9 0 SCOP 103473 MFS general substrate transporter
64 56 16 1 SCOP 51197 Clavaminate synthase-like
60 52 25 3 SCOP 49899 Concanavalin A-like lectins/glucanases
58 53 29 0 SCOP 46785 "Winged helix" DNA-binding domain
58 57 11 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
55 55 6 1 SCOP 103506 Mitochondrial carrier
54 53 12 2 SCOP 56219 DNase I-like
52 51 13 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
51 49 17 4 SCOP 53098 Ribonuclease H-like
48 47 8 7 SCOP 53383 PLP-dependent transferases
47 40 8 0 SCOP 90123 ABC transporter transmembrane region
46 29 12 2 SCOP 55753 Actin depolymerizing proteins
46 46 23 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
45 44 19 2 SCOP 50447 Translation proteins
41 40 21 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
40 40 13 2 SCOP 54495 UBC-like
40 29 17 1 SCOP 81296 E set domains
40 39 13 0 SCOP 81665 Calcium ATPase, transmembrane domain M
38 37 12 1 SCOP 53850 Periplasmic binding protein-like II
38 37 20 6 SCOP 54211 Ribosomal protein S5 domain 2-like
38 38 13 5 SCOP 51445 (Trans)glycosidases
38 24 16 0 SCOP 52113 BRCT domain
38 38 12 0 SCOP 81653 Calcium ATPase, transduction domain A
36 29 21 0 SCOP 57184 Growth factor receptor domain
36 36 24 2 SCOP 48350 GTPase activation domain, GAP
34 33 5 1 SCOP 50129 GroES-like
34 33 22 0 SCOP 46934 UBA-like
33 33 6 2 SCOP 53448 Nucleotide-diphospho-sugar transferases
33 33 5 2 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
33 33 14 0 SCOP 52172 CheY-like
33 11 7 1 SCOP 63411 LuxS/MPP-like metallohydrolase
33 33 5 1 SCOP 47616 GST C-terminal domain-like
33 33 7 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
33 19 8 1 SCOP 47954 Cyclin-like
32 32 9 0 SCOP 58038 SNARE fusion complex
32 32 7 2 SCOP 47113 Histone-fold
32 31 10 1 SCOP 56801 Acetyl-CoA synthetase-like
32 31 17 2 SCOP 49785 Galactose-binding domain-like
32 17 7 1 SCOP 54980 EF-G C-terminal domain-like
32 20 14 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
31 31 6 0 SCOP 50494 Trypsin-like serine proteases
31 31 11 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
30 30 20 2 SCOP 55681 Class II aaRS and biotin synthetases
30 30 3 1 SCOP 52490 Tubulin nucleotide-binding domain-like
29 28 15 3 SCOP 52374 Nucleotidylyl transferase
29 29 12 1 SCOP 56399 ADP-ribosylation
29 21 8 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
29 29 2 1 SCOP 55307 Tubulin C-terminal domain-like
28 26 15 5 SCOP 56059 Glutathione synthetase ATP-binding domain-like
28 28 8 0 SCOP 55811 Nudix
28 28 7 5 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
28 28 12 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
28 28 7 1 SCOP 48366 Ras GEF
27 27 10 4 SCOP 53187 Zn-dependent exopeptidases
27 26 13 1 SCOP 47576 Calponin-homology domain, CH-domain
27 26 12 1 SCOP 52743 Subtilisin-like
27 27 14 1 SCOP 48065 DBL homology domain (DH-domain)
26 22 10 2 SCOP 52096 ClpP/crotonase
26 18 7 0 SCOP 47095 HMG-box
26 26 8 2 SCOP 64356 SNARE-like
26 26 12 1 SCOP 46565 Chaperone J-domain
26 14 7 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
26 26 13 0 SCOP 47769 SAM/Pointed domain
25 25 7 1 SCOP 47895 Transducin (alpha subunit), insertion domain
24 24 4 3 SCOP 56281 Metallo-hydrolase/oxidoreductase
24 16 12 0 SCOP 141571 Pentapeptide repeat-like
24 24 10 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
23 23 8 3 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
23 18 8 1 SCOP 54631 CBS-domain pair
22 21 8 1 SCOP 55120 Pseudouridine synthase
21 21 8 3 SCOP 52467 DHS-like NAD/FAD-binding domain
21 21 10 0 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
20 20 2 1 SCOP 51430 NAD(P)-linked oxidoreductase
20 20 6 1 SCOP 50891 Cyclophilin-like
20 20 8 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
19 18 9 7 SCOP 51556 Metallo-dependent hydrolases
19 19 3 1 SCOP 51395 FMN-linked oxidoreductases
19 19 8 0 SCOP 49764 HSP20-like chaperones
19 15 6 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
19 16 10 0 SCOP 81324 Voltage-gated potassium channels
19 17 12 1 SCOP 51230 Single hybrid motif
19 13 6 1 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
19 19 10 0 SCOP 50965 Galactose oxidase, central domain
18 18 7 3 SCOP 52317 Class I glutamine amidotransferase-like
18 17 4 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
18 18 10 0 SCOP 64268 PX domain
18 17 10 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
18 18 4 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
18 17 8 1 SCOP 56176 FAD-binding/transporter-associated domain-like
17 17 6 3 SCOP 53254 Phosphoglycerate mutase-like
17 17 4 1 SCOP 50182 Sm-like ribonucleoproteins
17 11 6 2 SCOP 53901 Thiolase-like
17 14 5 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
17 17 7 2 SCOP 48592 GroEL equatorial domain-like
16 16 9 1 SCOP 52949 Macro domain-like
16 13 11 0 SCOP 50044 SH3-domain
16 16 6 1 SCOP 56349 DNA breaking-rejoining enzymes
16 14 8 1 SCOP 82199 SET domain
16 12 9 0 SCOP 57903 FYVE/PHD zinc finger
16 16 7 2 SCOP 52029 GroEL apical domain-like
16 16 11 0 SCOP 144232 HIT/MYND zinc finger-like
16 15 6 0 SCOP 54849 GroEL-intermediate domain like
15 11 5 4 SCOP 100950 NagB/RpiA/CoA transferase-like
15 13 5 0 SCOP 101478 ADP-ribosylglycohydrolase
15 10 7 0 SCOP 57667 beta-beta-alpha zinc fingers
15 13 10 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
15 15 11 0 SCOP 54277 CAD & PB1 domains
15 13 11 0 SCOP 57196 EGF/Laminin
15 15 10 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
15 5 5 0 SCOP 57262 Leech antihemostatic proteins
14 14 9 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
14 14 14 0 SCOP 103657 BAR/IMD domain-like
14 14 9 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
14 13 5 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
14 12 5 1 SCOP 54534 FKBP-like
14 14 4 5 SCOP 51182 RmlC-like cupins
14 14 9 1 SCOP 52954 Class II aaRS ABD-related
14 14 4 1 SCOP 47661 t-snare proteins
14 14 7 0 SCOP 56496 Fibrinogen C-terminal domain-like
13 13 4 1 SCOP 81606 PP2C-like
13 11 6 1 SCOP 50104 Translation proteins SH3-like domain
13 13 6 1 SCOP 52218 Flavoproteins
13 13 7 1 SCOP 51695 PLC-like phosphodiesterases
13 13 5 2 SCOP 48576 Terpenoid synthases
13 12 8 2 SCOP 74650 Galactose mutarotase-like
13 13 5 1 SCOP 48208 Six-hairpin glycosidases
13 10 6 1 SCOP 56601 beta-lactamase/transpeptidase-like
13 13 9 2 SCOP 81301 Nucleotidyltransferase
13 13 10 2 SCOP 88697 PUA domain-like
13 13 6 1 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
13 7 5 0 SCOP 56024 Phospholipase D/nuclease
13 9 6 0 SCOP 50405 Actin-crosslinking proteins
13 13 7 1 SCOP 63380 Riboflavin synthase domain-like
13 13 7 2 SCOP 54373 FAD-linked reductases, C-terminal domain
13 12 5 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
13 7 5 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
13 9 9 0 SCOP 51045 WW domain
12 12 7 1 SCOP 55920 Creatinase/aminopeptidase
12 8 6 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
12 11 8 1 SCOP 56104 SAICAR synthase-like
12 12 4 2 SCOP 109604 HD-domain/PDEase-like
12 11 4 2 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
12 12 7 0 SCOP 52151 FabD/lysophospholipase-like
12 12 4 0 SCOP 144091 Rhomboid-like
12 6 6 0 SCOP 53822 Periplasmic binding protein-like I
12 12 9 0 SCOP 49879 SMAD/FHA domain
12 12 9 1 SCOP 82171 DPP6 N-terminal domain-like
12 12 3 1 SCOP 56574 Serpins
12 12 9 1 SCOP 54768 dsRNA-binding domain-like
12 10 8 0 SCOP 54160 Chromo domain-like
12 9 8 0 SCOP 90229 CCCH zinc finger
12 7 5 1 SCOP 82109 MIR domain
11 11 4 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
11 11 3 1 SCOP 53720 ALDH-like
11 11 6 0 SCOP 101908 Putative isomerase YbhE
11 11 6 1 SCOP 53649 Alkaline phosphatase-like
11 11 2 0 SCOP 161084 MAPEG domain-like
11 10 9 0 SCOP 57783 Zinc beta-ribbon
11 9 7 1 SCOP 51206 cAMP-binding domain-like
11 11 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
11 11 5 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
11 9 6 0 SCOP 51110 alpha-D-mannose-specific plant lectins
11 11 5 1 SCOP 74788 Cullin repeat-like
11 11 6 0 SCOP 57845 B-box zinc-binding domain
11 11 5 0 SCOP 52087 CRAL/TRIO domain
11 11 7 1 SCOP 56204 Hect, E3 ligase catalytic domain
11 11 6 1 SCOP 109993 VPS9 domain
10 9 6 0 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
10 9 7 1 SCOP 52777 CoA-dependent acyltransferases
10 10 5 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
10 10 3 0 SCOP 51011 Glycosyl hydrolase domain
10 9 6 0 SCOP 50911 Mannose 6-phosphate receptor domain
10 5 5 0 SCOP 47862 Saposin
10 5 4 0 SCOP 100909 IP3 receptor type 1 binding core, domain 2
9 9 5 3 SCOP 53613 Ribokinase-like
9 8 6 0 SCOP 47336 ACP-like
9 9 4 0 SCOP 102114 Radical SAM enzymes
9 9 7 3 SCOP 56672 DNA/RNA polymerases
9 9 7 1 SCOP 54427 NTF2-like
9 9 5 1 SCOP 56317 Carbon-nitrogen hydrolase
9 9 3 0 SCOP 52266 SGNH hydrolase
9 9 4 2 SCOP 52768 Arginase/deacetylase
9 8 4 1 SCOP 81340 Clc chloride channel
9 9 5 0 SCOP 161111 Cation efflux protein transmembrane domain-like
9 9 3 0 SCOP 53955 Lysozyme-like
9 6 6 0 SCOP 69065 RNase III domain-like
9 9 3 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
9 9 5 0 SCOP 47188 Hemerythrin-like
9 8 8 1 SCOP 52440 PreATP-grasp domain
9 9 6 0 SCOP 52075 Outer arm dynein light chain 1
9 9 4 0 SCOP 46938 CRAL/TRIO N-terminal domain
9 9 4 1 SCOP 75632 Cullin homology domain
9 7 7 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
8 7 4 2 SCOP 53271 PRTase-like
8 8 2 2 SCOP 47240 Ferritin-like
8 8 4 0 SCOP 51161 Trimeric LpxA-like enzymes
8 8 5 4 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
8 7 5 1 SCOP 51419 PLP-binding barrel
8 8 6 2 SCOP 55315 L30e-like
8 8 4 1 SCOP 56815 Sec1/munc18-like (SM) proteins
8 8 8 1 SCOP 88723 PIN domain-like
8 8 4 0 SCOP 53590 Nucleoside hydrolase
8 8 3 0 SCOP 46579 Prefoldin
8 7 4 0 SCOP 57997 Tropomyosin
8 8 7 1 SCOP 55781 GAF domain-like
8 7 3 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
8 3 2 1 SCOP 55973 S-adenosylmethionine synthetase
8 8 5 0 SCOP 57863 ArfGap/RecO-like zinc finger
8 3 3 1 SCOP 53738 Phosphoglucomutase, first 3 domains
8 4 3 1 SCOP 55394 Bactericidal permeability-increasing protein, BPI
8 7 5 0 SCOP 49599 TRAF domain-like
7 4 3 0 SCOP 81333 F1F0 ATP synthase subunit C
7 7 3 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
7 7 3 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
7 7 4 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
7 7 5 1 SCOP 50022 ISP domain
7 5 4 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
7 7 4 0 SCOP 69322 Tricorn protease domain 2
7 3 3 0 SCOP 50199 Staphylococcal nuclease
7 7 4 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
7 5 4 1 SCOP 56003 Molybdenum cofactor-binding domain
7 5 3 1 SCOP 55979 DNA clamp
7 7 5 0 SCOP 103032 Hypothetical protein YwqG
7 5 5 1 SCOP 158702 Sec63 N-terminal domain-like
7 7 4 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
7 7 2 1 SCOP 81271 TGS-like
7 7 5 1 SCOP 47370 Bromodomain
7 7 3 1 SCOP 48464 ENTH/VHS domain
7 7 3 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
6 6 5 2 SCOP 51569 Aldolase
6 6 5 0 SCOP 55174 Alpha-L RNA-binding motif
6 5 5 0 SCOP 52980 Restriction endonuclease-like
6 6 2 0 SCOP 51316 Mss4-like
6 6 4 0 SCOP 54292 2Fe-2S ferredoxin-like
6 6 2 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
6 6 3 0 SCOP 55144 LigT-like
6 6 6 1 SCOP 88713 Glycoside hydrolase/deacetylase
6 6 2 1 SCOP 55418 eIF4e-like
6 6 2 0 SCOP 55770 Profilin (actin-binding protein)
6 6 2 1 SCOP 102405 MCP/YpsA-like
6 6 3 1 SCOP 111352 Ammonium transporter
6 3 1 1 SCOP 49503 Cupredoxins
6 5 3 0 SCOP 55797 PR-1-like
6 5 5 0 SCOP 54975 Acylphosphatase/BLUF domain-like
6 5 4 1 SCOP 89124 Nop domain
6 6 5 1 SCOP 55186 ThrRS/AlaRS common domain
6 4 2 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
6 5 3 0 SCOP 54403 Cystatin/monellin
6 6 5 0 SCOP 81995 beta-sandwich domain of Sec23/24
6 5 3 1 SCOP 52210 Succinyl-CoA synthetase domains
6 6 4 1 SCOP 50621 Alanine racemase C-terminal domain-like
6 6 3 0 SCOP 49363 Purple acid phosphatase, N-terminal domain
6 6 4 0 SCOP 68906 SAP domain
6 6 5 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
6 6 3 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
6 6 6 1 SCOP 81837 BEACH domain
6 6 2 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
6 6 3 1 SCOP 101152 Mob1/phocein
6 6 1 1 SCOP 48445 14-3-3 protein
6 6 5 0 SCOP 75553 Smc hinge domain
5 5 3 0 SCOP 57829 Zn-binding ribosomal proteins
5 5 5 1 SCOP 53137 Translational machinery components
5 4 2 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
5 5 3 1 SCOP 75217 alpha/beta knot
5 4 3 1 SCOP 55298 YjgF-like
5 5 3 1 SCOP 50475 FMN-binding split barrel
5 5 4 0 SCOP 81321 Family A G protein-coupled receptor-like
5 5 3 1 SCOP 50630 Acid proteases
5 5 4 1 SCOP 48439 Protein prenylyltransferase
5 4 3 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
5 4 4 0 SCOP 55008 HMA, heavy metal-associated domain
5 5 4 2 SCOP 55931 Glutamine synthetase/guanido kinase
5 5 2 2 SCOP 54909 Dimeric alpha+beta barrel
5 5 1 0 SCOP 143990 YbiA-like
5 5 4 0 SCOP 140931 Fic-like
5 5 4 1 SCOP 55895 Ribonuclease Rh-like
5 4 3 0 SCOP 53092 Creatinase/prolidase N-terminal domain
5 5 2 0 SCOP 48619 Phospholipase A2, PLA2
5 5 2 0 SCOP 159941 MM3350-like
5 5 2 0 SCOP 48019 post-AAA+ oligomerization domain-like
5 5 4 1 SCOP 81631 PAP/OAS1 substrate-binding domain
5 5 4 0 SCOP 140860 Pseudo ankyrin repeat-like
5 5 2 0 SCOP 117892 Band 7/SPFH domain
5 5 4 0 SCOP 82708 R3H domain
5 5 4 0 SCOP 101690 PAZ domain
5 4 3 0 SCOP 117839 WWE domain
5 5 4 0 SCOP 57756 Retrovirus zinc finger-like domains
5 5 5 0 SCOP 88688 Families 57/38 glycoside transferase middle domain
5 1 1 0 SCOP 81698 FF domain
5 5 4 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
4 3 2 1 SCOP 53167 Purine and uridine phosphorylases
4 4 2 0 SCOP 53927 Cytidine deaminase-like
4 4 2 1 SCOP 75304 Amidase signature (AS) enzymes
4 4 4 2 SCOP 51366 Ribulose-phoshate binding barrel
4 4 2 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
4 4 3 0 SCOP 54197 HIT-like
4 4 3 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
4 4 3 0 SCOP 52080 Ribosomal proteins L15p and L18e
4 4 4 0 SCOP 110324 Ribosomal L27 protein-like
4 4 2 1 SCOP 50324 Inorganic pyrophosphatase
4 4 2 0 SCOP 160369 Ribosomal protein L10-like
4 4 4 1 SCOP 54862 4Fe-4S ferredoxins
4 4 2 0 SCOP 82657 BolA-like
4 4 2 1 SCOP 144000 Oxysterol-binding protein-like
4 3 2 1 SCOP 54506 Diaminopimelate epimerase-like
4 4 1 0 SCOP 54897 Protease propeptides/inhibitors
4 3 2 1 SCOP 69645 Arp2/3 complex subunits
4 4 4 0 SCOP 55257 RBP11-like subunits of RNA polymerase
4 4 2 1 SCOP 55159 eIF1-like
4 4 2 0 SCOP 58113 Apolipoprotein A-I
4 4 2 1 SCOP 55909 Pentein
4 4 3 1 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
4 4 3 0 SCOP 102712 JAB1/MPN domain
4 4 3 1 SCOP 118196 YaeB-like
4 4 1 1 SCOP 52016 LeuD/IlvD-like
4 2 2 0 SCOP 56266 DmpA/ArgJ-like
4 4 3 0 SCOP 50692 ADC-like
4 4 3 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
4 4 1 1 SCOP 53732 Aconitase iron-sulfur domain
4 3 2 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
4 4 3 0 SCOP 55021 ACT-like
4 4 1 0 SCOP 50814 Lipocalins
4 3 2 1 SCOP 161070 SNF-like
4 3 3 0 SCOP 47781 RuvA domain 2-like
4 4 4 1 SCOP 100939 SPOC domain-like
4 4 4 1 SCOP 51246 Rudiment single hybrid motif
4 4 2 0 SCOP 50370 Ricin B-like lectins
4 4 3 0 SCOP 160443 SMR domain-like
4 4 3 1 SCOP 52922 TK C-terminal domain-like
4 3 3 0 SCOP 49468 VHL
4 4 4 0 SCOP 49464 Carboxypeptidase regulatory domain-like
4 4 3 1 SCOP 48334 DNA repair protein MutS, domain III
4 4 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
4 4 2 1 SCOP 48225 Seven-hairpin glycosidases
4 4 2 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
4 4 1 0 SCOP 51101 Mannose-binding lectins
4 4 3 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
4 2 2 0 SCOP 118310 AN1-like Zinc finger
4 4 2 0 SCOP 55550 SH2 domain
4 4 3 0 SCOP 49348 Clathrin adaptor appendage domain
4 4 4 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
4 3 3 0 SCOP 100895 Kazal-type serine protease inhibitors
4 4 3 0 SCOP 47391 Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
4 4 3 0 SCOP 140741 RUN domain-like
4 4 3 1 SCOP 75001 Dipeptidyl peptidase I (cathepsin C), exclusion domain
4 4 4 1 SCOP 48425 Sec7 domain
4 4 3 0 SCOP 47050 VHP, Villin headpiece domain
4 4 2 0 SCOP 110942 HSP90 C-terminal domain
4 4 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
4 4 2 1 SCOP 55666 Ribonuclease PH domain 2-like
4 4 3 0 SCOP 143885 RGC domain-like
4 4 4 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
4 4 3 0 SCOP 63501 Frizzled cysteine-rich domain
4 2 2 0 SCOP 82615 Polo-box domain
4 3 3 0 SCOP 140383 BSD domain-like
4 4 4 0 SCOP 82919 Zn-finger domain of Sec23/24
3 3 2 2 SCOP 53697 SIS domain
3 3 3 0 SCOP 53633 Carbamate kinase-like
3 3 2 2 SCOP 48557 L-aspartase-like
3 3 1 1 SCOP 51283 dUTPase-like
3 3 2 1 SCOP 48150 DNA-glycosylase
3 3 2 1 SCOP 51713 tRNA-guanine transglycosylase
3 3 1 1 SCOP 56770 HydA/Nqo6-like
3 3 1 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
3 2 2 0 SCOP 55205 EPT/RTPC-like
3 3 3 0 SCOP 50685 Barwin-like endoglucanases
3 3 2 1 SCOP 48256 Citrate synthase
3 2 2 1 SCOP 51726 UROD/MetE-like
3 2 2 0 SCOP 140718 Mediator hinge subcomplex-like
3 3 2 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
3 3 1 0 SCOP 51306 LexA/Signal peptidase
3 3 3 0 SCOP 47819 HRDC-like
3 3 1 3 SCOP 52972 ITPase-like
3 3 3 0 SCOP 161219 CHY zinc finger-like
3 3 3 0 SCOP 110849 ParB/Sulfiredoxin
3 3 1 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
3 3 2 1 SCOP 82282 Homocysteine S-methyltransferase
3 3 2 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
3 3 2 1 SCOP 53056 beta-carbonic anhydrase, cab
3 3 2 1 SCOP 56529 FAH
3 3 1 0 SCOP 55718 SCP-like
3 2 2 0 SCOP 46955 Putative DNA-binding domain
3 3 2 0 SCOP 50800 PK beta-barrel domain-like
3 3 2 1 SCOP 50993 Peptidase/esterase 'gauge' domain
3 3 2 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
3 3 1 1 SCOP 53213 LigB-like
3 3 3 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
3 3 2 1 SCOP 103196 Roadblock/LC7 domain
3 3 2 1 SCOP 56534 Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
3 3 1 0 SCOP 55136 Probable bacterial effector-binding domain
3 3 2 1 SCOP 102462 Peptidyl-tRNA hydrolase II
3 3 2 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
3 2 2 0 SCOP 69318 Integrin alpha N-terminal domain
3 3 2 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
3 3 3 1 SCOP 142921 WGR domain-like
3 2 2 1 SCOP 51971 Nucleotide-binding domain
3 3 3 0 SCOP 49265 Fibronectin type III
3 3 2 0 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
3 3 3 1 SCOP 68923 PEP carboxykinase N-terminal domain
3 3 1 0 SCOP 56436 C-type lectin-like
3 3 3 1 SCOP 140990 FtsH protease domain-like
3 2 2 0 SCOP 46966 Spectrin repeat
3 3 2 1 SCOP 55060 GHMP Kinase, C-terminal domain
3 3 3 0 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
3 3 3 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
3 3 3 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
3 3 2 0 SCOP 49354 PapD-like
3 3 1 1 SCOP 56327 LDH C-terminal domain-like
3 3 3 0 SCOP 47741 CO dehydrogenase ISP C-domain like
3 3 3 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
3 3 3 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
3 3 1 1 SCOP 47446 Signal peptide-binding domain
3 3 3 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
3 3 2 0 SCOP 57302 Snake toxin-like
3 2 2 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
3 2 2 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
3 3 3 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
3 3 2 0 SCOP 57959 Leucine zipper domain
3 3 3 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
3 3 2 0 SCOP 47912 Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
3 3 2 0 SCOP 143503 PUG domain-like
3 3 3 0 SCOP 47031 Second domain of FERM
3 3 2 1 SCOP 54585 Cdc48 domain 2-like
3 3 2 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
3 3 3 1 SCOP 81811 Helical domain of Sec23/24
2 2 2 1 SCOP 81338 Aquaporin-like
2 2 2 1 SCOP 56808 Ribosomal protein L1
2 1 1 0 SCOP 53178 Peptidyl-tRNA hydrolase-like
2 2 1 1 SCOP 52141 Uracil-DNA glycosylase-like
2 2 2 0 SCOP 82607 YbaB-like
2 2 2 1 SCOP 52166 Ribosomal protein L4
2 2 2 0 SCOP 54843 Ribosomal protein L22
2 2 2 1 SCOP 51658 Xylose isomerase-like
2 2 1 1 SCOP 75620 Release factor
2 2 2 1 SCOP 82649 SufE/NifU
2 2 2 1 SCOP 52161 Ribosomal protein L13
2 2 1 0 SCOP 47060 S15/NS1 RNA-binding domain
2 2 2 1 SCOP 51730 FAD-linked oxidoreductase
2 2 2 0 SCOP 89360 HesB-like domain
2 2 2 1 SCOP 50715 Ribosomal protein L25-like
2 2 1 1 SCOP 56655 Carbohydrate phosphatase
2 2 2 0 SCOP 54060 His-Me finger endonucleases
2 2 2 0 SCOP 55129 Ribosomal protein L30p/L7e
2 2 2 0 SCOP 46561 Ribosomal protein L29 (L29p)
2 2 2 0 SCOP 144217 CSL zinc finger
2 2 2 0 SCOP 55469 FMN-dependent nitroreductase-like
2 2 2 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
2 2 2 1 SCOP 56634 Heme-dependent catalase-like
2 2 1 1 SCOP 54648 DLC
2 2 2 2 SCOP 46626 Cytochrome c
2 2 1 1 SCOP 52499 Isochorismatase-like hydrolases
2 2 1 0 SCOP 47027 Acyl-CoA binding protein
2 2 1 0 SCOP 63393 RNA polymerase subunits
2 2 2 0 SCOP 89895 FYSH domain
2 2 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
2 2 2 1 SCOP 56019 The spindle assembly checkpoint protein mad2
2 2 2 0 SCOP 53639 AraD/HMP-PK domain-like
2 2 1 1 SCOP 48113 Heme-dependent peroxidases
2 2 2 0 SCOP 47072 Cysteine alpha-hairpin motif
2 2 2 1 SCOP 143113 NAP-like
2 2 1 0 SCOP 46458 Globin-like
2 2 1 1 SCOP 101546 ASF1-like
2 2 2 0 SCOP 69118 AhpD-like
2 2 2 1 SCOP 53795 PEP carboxykinase-like
2 2 2 2 SCOP 51998 PFL-like glycyl radical enzymes
2 2 2 0 SCOP 58100 Bacterial hemolysins
2 2 2 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
2 2 2 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
2 2 2 0 SCOP 55154 CYTH-like phosphatases
2 2 2 1 SCOP 103365 Hypothetical protein PH1602
2 2 2 1 SCOP 54518 Tubby C-terminal domain-like
2 2 1 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
2 2 1 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
2 2 2 0 SCOP 55826 YbaK/ProRS associated domain
2 2 2 0 SCOP 102588 LmbE-like
2 2 2 1 SCOP 103025 Folate-binding domain
2 2 2 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
2 2 2 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
2 2 2 1 SCOP 111326 Urocanase
2 2 1 0 SCOP 159659 Cgl1923-like
2 2 1 1 SCOP 51604 Enolase C-terminal domain-like
2 1 1 0 SCOP 160379 SP0830-like
2 1 1 1 SCOP 160104 Acetoacetate decarboxylase-like
2 2 2 0 SCOP 47592 SWIB/MDM2 domain
2 2 2 0 SCOP 56726 DNA topoisomerase IV, alpha subunit
2 2 2 0 SCOP 102198 Putative cyclase
2 2 1 0 SCOP 160631 SMI1/KNR4-like
2 2 2 0 SCOP 82704 AlbA-like
2 2 2 1 SCOP 74784 Translin
2 2 2 0 SCOP 46589 tRNA-binding arm
2 2 2 0 SCOP 143865 CorA soluble domain-like
2 2 2 1 SCOP 160991 CV3147-like
2 2 2 0 SCOP 54106 LysM domain
2 2 2 1 SCOP 56719 Type II DNA topoisomerase
2 2 1 0 SCOP 52935 PK C-terminal domain-like
2 2 2 0 SCOP 52009 Phosphohistidine domain
2 2 2 0 SCOP 90257 Myosin rod fragments
2 2 2 0 SCOP 55658 L9 N-domain-like
2 2 2 0 SCOP 160059 PriA/YqbF domain
2 2 2 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
2 2 1 1 SCOP 54826 Enolase N-terminal domain-like
2 2 2 1 SCOP 53920 Fe-only hydrogenase
2 2 2 0 SCOP 90209 Ran binding protein zinc finger-like
2 2 2 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
2 2 1 1 SCOP 101887 Apyrase
2 2 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
2 2 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
2 1 1 1 SCOP 55945 TATA-box binding protein-like
2 2 1 0 SCOP 55637 Cell cycle regulatory proteins
2 2 2 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
2 2 2 0 SCOP 48431 Lipovitellin-phosvitin complex, superhelical domain
2 1 1 0 SCOP 56053 Ribosomal protein L6
2 2 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
2 2 2 0 SCOP 63748 Tudor/PWWP/MBT
2 1 1 0 SCOP 53743 FucI/AraA N-terminal and middle domains
2 2 1 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
2 2 2 0 SCOP 74924 Cap-Gly domain
2 2 2 0 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
2 1 1 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
2 2 2 0 SCOP 46774 ARID-like
2 2 2 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
2 2 2 1 SCOP 111347 Rap/Ran-GAP
2 2 2 0 SCOP 158573 GINS helical bundle-like
2 2 2 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
2 2 2 1 SCOP 55455 SRF-like
2 2 2 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
2 2 1 0 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
2 1 1 0 SCOP 109905 Surp module (SWAP domain)
2 2 1 0 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
2 2 2 0 SCOP 144074 E2F-DP heterodimerization region
2 2 2 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
2 2 2 0 SCOP 63491 BAG domain
2 2 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
2 1 1 0 SCOP 47762 PAH2 domain
2 2 2 0 SCOP 140111 Endosomal sorting complex assembly domain
2 2 2 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
2 2 2 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
2 2 2 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
2 2 2 0 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
2 2 2 0 SCOP 50916 Rap30/74 interaction domains
2 2 2 1 SCOP 81382 Skp1 dimerisation domain-like
2 2 1 1 SCOP 88802 Pre-PUA domain
2 2 2 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
2 2 2 1 SCOP 63887 P-domain of calnexin/calreticulin
2 2 2 0 SCOP 140586 Dcp2 domain-like
2 2 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
2 2 1 0 SCOP 89009 GAT-like domain
2 2 2 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
2 2 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
2 2 2 0 SCOP 53150 DNA repair protein MutS, domain II
2 2 2 0 SCOP 109728 Hypothetical protein AF0491, middle domain
2 2 2 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
1 1 1 0 SCOP 56731 DNA primase core
1 1 1 0 SCOP 53790 Tetrapyrrole methylase
1 1 1 1 SCOP 47973 Ribosomal protein S7
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 0 SCOP 56420 Peptide deformylase
1 1 1 0 SCOP 54999 Ribosomal protein S10
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 54686 Ribosomal protein L16p/L10e
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 1 SCOP 103491 Preprotein translocase SecY subunit
1 1 1 0 SCOP 46946 S13-like H2TH domain
1 1 1 0 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 64182 DHH phosphoesterases
1 1 1 0 SCOP 143034 L35p-like
1 1 1 0 SCOP 74731 Ribosomal protein L20
1 1 1 1 SCOP 53784 Phosphofructokinase
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 0 SCOP 53597 Dihydrofolate reductase-like
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 143800 L28p-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 82549 DAK1/DegV-like
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 0 SCOP 82784 OsmC-like
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 1 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 0 SCOP 55821 YrdC/RibB
1 1 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 1 SCOP 52313 Ribosomal protein S2
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 1 SCOP 56796 Dehydroquinate synthase-like
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 55387 Frataxin/Nqo15-like
1 1 1 1 SCOP 48140 Ribosomal protein L19 (L19e)
1 1 1 0 SCOP 52042 Ribosomal protein L32e
1 1 1 0 SCOP 144122 Tim10-like
1 1 1 0 SCOP 48613 Heme oxygenase-like
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
1 1 1 0 SCOP 54575 Ribosomal protein L31e
1 1 1 0 SCOP 53328 Formyltransferase
1 1 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 57798 Casein kinase II beta subunit
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 1 SCOP 55248 PCD-like
1 1 1 0 SCOP 144210 Nop10-like SnoRNP
1 1 1 1 SCOP 53774 Glutaminase/Asparaginase
1 1 1 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
1 1 1 0 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
1 1 1 1 SCOP 49329 Cu,Zn superoxide dismutase-like
1 1 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
1 1 1 0 SCOP 47694 Cytochrome c oxidase subunit h
1 1 1 0 SCOP 49777 PEBP-like
1 1 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 1 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 53800 Chelatase
1 1 1 0 SCOP 51069 Carbonic anhydrase
1 1 1 0 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 0 SCOP 69635 Type III secretory system chaperone-like
1 1 1 0 SCOP 55724 Mog1p/PsbP-like
1 1 1 0 SCOP 49482 Aromatic compound dioxygenase
1 1 1 0 SCOP 54523 Pili subunits
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 54447 ssDNA-binding transcriptional regulator domain
1 1 1 0 SCOP 117782 YbjQ-like
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 54913 GlnB-like
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 0 SCOP 88874 Receptor-binding domain of short tail fibre protein gp12
1 1 1 0 SCOP 50956 Thermostable phytase (3-phytase)
1 1 1 0 SCOP 159501 EreA/ChaN-like
1 1 1 0 SCOP 117856 AF0104/ALDC/Ptd012-like
1 1 1 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
1 1 1 0 SCOP 143081 BB1717-like
1 1 1 0 SCOP 159245 AttH-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 1 SCOP 51391 Thiamin phosphate synthase
1 1 1 0 SCOP 143456 VC0467-like
1 1 1 1 SCOP 89028 Cobalamin adenosyltransferase-like
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 1 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 1 SCOP 118215 Proton glutamate symport protein
1 1 1 0 SCOP 160909 ATP12-like
1 1 1 0 SCOP 110069 ApaG-like
1 1 1 1 SCOP 101386 all-alpha NTP pyrophosphatases
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 1 SCOP 110581 Indigoidine synthase A-like
1 1 1 1 SCOP 56821 Prismane protein-like
1 1 1 0 SCOP 57802 Rubredoxin-like
1 1 1 0 SCOP 117457 FumA C-terminal domain-like
1 1 1 1 SCOP 56507 Methionine synthase activation domain-like
1 1 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 1 SCOP 110738 Glycerate kinase I
1 1 1 1 SCOP 51703 Cobalamin (vitamin B12)-dependent enzymes
1 1 1 0 SCOP 101473 DhaL-like
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 69786 YggU-like
1 1 1 0 SCOP 161266 Gam-like
1 1 1 0 SCOP 103247 TT1751-like
1 1 1 0 SCOP 110395 CutC-like
1 1 1 0 SCOP 52038 Barstar-related
1 1 1 1 SCOP 160920 PSTPO5379-like
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 0 SCOP 111321 AF1104-like
1 1 1 0 SCOP 54984 eEF-1beta-like
1 1 1 1 SCOP 46548 alpha-helical ferredoxin
1 1 1 0 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 0 SCOP 160374 RplX-like
1 1 1 0 SCOP 69695 SRP19
1 1 1 1 SCOP 103165 Ta1353-like
1 1 1 0 SCOP 141523 L,D-transpeptidase catalytic domain-like
1 1 1 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
1 1 1 0 SCOP 158832 Tex N-terminal region-like
1 1 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
1 1 1 0 SCOP 50960 TolB, C-terminal domain
1 1 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
1 1 1 0 SCOP 82093 Heme chaperone CcmE
1 1 1 1 SCOP 56512 Nitric oxide (NO) synthase oxygenase domain
1 1 1 0 SCOP 81923 Double Clp-N motif
1 1 1 1 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 69304 Tricorn protease N-terminal domain
1 1 1 0 SCOP 102645 CoaB-like
1 1 1 0 SCOP 48230 Chondroitin AC/alginate lyase
1 1 1 0 SCOP 49344 CBD9-like
1 1 1 0 SCOP 118352 HSP33 redox switch-like
1 1 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 49313 Cadherin-like
1 1 1 0 SCOP 142877 EndoU-like
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 52129 Caspase-like
1 1 1 0 SCOP 160419 YdfO-like
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 0 SCOP 158745 LanC-like
1 1 1 0 SCOP 158472 HAMP domain-like
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 0 SCOP 161093 MgtE membrane domain-like
1 1 1 0 SCOP 141673 MOSC N-terminal domain-like
1 1 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 0 SCOP 51294 Hedgehog/intein (Hint) domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 0 SCOP 81585 PsbU/PolX domain-like
1 1 1 1 SCOP 110019 ERO1-like
1 1 1 0 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
1 1 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 1 SCOP 56042 PurM C-terminal domain-like
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 0 SCOP 48674 Fe-only hydrogenase smaller subunit
1 1 1 1 SCOP 55326 PurM N-terminal domain-like
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 56837 Colicin
1 1 1 0 SCOP 110836 Hypothetical protein SAV1430
1 1 1 0 SCOP 117289 Nucleoporin domain
1 1 1 0 SCOP 49299 PKD domain
1 1 1 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
1 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
1 1 1 0 SCOP 47933 ERP29 C domain-like
1 1 1 1 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 0 SCOP 64397 Hsp33 domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 1 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 160696 BTG domain-like
1 1 1 1 SCOP 89817 Mago nashi protein
1 1 1 1 SCOP 69000 FAD-dependent thiol oxidase
1 1 1 0 SCOP 63570 PABC (PABP) domain
1 1 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
1 1 1 0 SCOP 57889 Cysteine-rich domain
1 1 1 0 SCOP 57924 Inhibitor of apoptosis (IAP) repeat
1 1 1 0 SCOP 56968 Lipovitellin-phosvitin complex; beta-sheet shell regions
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 0 SCOP 158639 ENT-like
1 1 1 0 SCOP 116846 MIT domain
1 1 1 0 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 63451 LEM domain
1 1 1 0 SCOP 143875 ERH-like
1 1 1 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
1 1 1 0 SCOP 140856 USP8 N-terminal domain-like
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 0 SCOP 101233 PWI domain
1 1 1 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
1 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 0 SCOP 49590 PHL pollen allergen
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 0 SCOP 144292 occludin/ELL-like
1 1 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 0 SCOP 89942 eEF1-gamma domain
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 160527 V-type ATPase subunit E-like
1 1 1 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
1 1 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
1 1 1 0 SCOP 109715 DEK C-terminal domain
1 1 1 1 SCOP 50989 Clathrin heavy-chain terminal domain
1 1 1 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
1 1 1 0 SCOP 57424 LDL receptor-like module
1 1 1 0 SCOP 46942 Elongation factor TFIIS domain 2
1 1 1 0 SCOP 140427 VPS28 C-terminal domain-like
1 1 1 0 SCOP 81872 BRCA2 helical domain
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 0 SCOP 89000 post-HMGL domain-like
1 1 1 0 SCOP 159042 Plus3-like
1 1 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
1 1 1 0 SCOP 55277 GYF domain
1 1 1 0 SCOP 69848 LCCL domain
1 1 1 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
1 1 1 0 SCOP 161245 Zinc hairpin stack
1 1 1 0 SCOP 140612 EB1 dimerisation domain-like
1 1 1 0 SCOP 102860 mRNA decapping enzyme DcpS N-terminal domain
1 1 1 0 SCOP 101420 C-terminal domain of Ku80
1 1 1 0 SCOP 160897 Taf5 N-terminal domain-like
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 160651 FLJ32549 C-terminal domain-like
1 1 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
1 1 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
1 1 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
1 1 1 0 SCOP 81502 ISP transmembrane anchor
1 1 1 1 SCOP 47644 Methionine synthase domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
1 1 1 0 SCOP 160996 HI0933 insert domain-like
1 1 1 0 SCOP 101238 XPC-binding domain
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 81878 BRCA2 tower domain
1 1 1 0 SCOP 158230 PRP4-like
1 1 1 0 SCOP 158548 FLJ32549 domain-like

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The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Head morphogenesis protein gp7
SCOP superfamily Notch domain
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily GCM domain
SCOP superfamily Doublecortin (DC)
SCOP superfamily PHP domain-like
SCOP superfamily Collagen-binding domain
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily TorD-like
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily ssDNA viruses
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Tumor suppressor gene product Apc
SCOP superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region
SCOP superfamily L-A virus major coat protein
SCOP superfamily MesJ substrate recognition domain-like
SCOP superfamily SEA domain
SCOP superfamily Nuclease A inhibitor (NuiA)
SCOP superfamily Viral chemokine binding protein m3
SCOP superfamily Orange carotenoid protein, N-terminal domain
SCOP superfamily Helical scaffold and wing domains of SecA
SCOP superfamily SopE-like GEF domain
SCOP superfamily Myosin phosphatase inhibitor 17kDa protein, CPI-17
SCOP superfamily Crustacean CHH/MIH/GIH neurohormone
SCOP superfamily X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain
SCOP superfamily beta-catenin-interacting protein ICAT
SCOP superfamily Plasmid maintenance system epsilon/zeta, antidote epsilon subunit
SCOP superfamily Nucleotidyltransferase substrate binding subunit/domain
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Photosystem I subunits PsaA/PsaB
SCOP superfamily Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Cytochrome c oxidase subunit II-like, transmembrane region
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIa
SCOP superfamily Transmembrane di-heme cytochromes
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily H-NS histone-like proteins
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily Siroheme synthase middle domains-like
SCOP superfamily Hypothetical protein MTH1880
SCOP superfamily Plakin repeat
SCOP superfamily Arabinanase/levansucrase/invertase
SCOP superfamily V-region of surface antigen I/II (SA I/II, PAC)
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Eea1 homodimerisation domain
SCOP superfamily DsrC, the gamma subunit of dissimilatory sulfite reductase
SCOP superfamily Phage fibre proteins
SCOP superfamily Integrin domains
SCOP superfamily Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain
SCOP superfamily Glutamyl tRNA-reductase dimerization domain
SCOP superfamily Bcr-Abl oncoprotein oligomerization domain
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Phase 1 flagellin
SCOP superfamily DNA-binding domain of intron-encoded endonucleases
SCOP superfamily Outer capsid protein sigma 3
SCOP superfamily Dipeptide transport protein
SCOP superfamily Pyridoxine 5'-phosphate synthase
SCOP superfamily Sortase
SCOP superfamily SAND domain-like
SCOP superfamily Cytolysin/lectin
SCOP superfamily Olfactory marker protein
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily Flagellar transcriptional activator FlhD
SCOP superfamily PTS-regulatory domain, PRD
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Oligomerization domain of hepatitis delta antigen
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Colicin Ia, N-terminal domain
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Multimerization domain of the phosphoprotein from sendai virus
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Zn-binding domains of ADDBP
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
SCOP superfamily FnI-like domain
SCOP superfamily TNF receptor-like
SCOP superfamily Cystine-knot cytokines
SCOP superfamily Trefoil
SCOP superfamily Kringle-like
SCOP superfamily Hairpin loop containing domain-like
SCOP superfamily Elafin-like
SCOP superfamily Anthrax protective antigen
SCOP superfamily Viral glycoprotein, central and dimerisation domains
SCOP superfamily Perfringolysin
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily Outer membrane phospholipase A (OMPLA)
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Upper collar protein gp10 (connector protein)
SCOP superfamily HydB/Nqo4-like
SCOP superfamily Replication terminator protein (Tus)
SCOP superfamily Penicillin binding protein dimerisation domain
SCOP superfamily gp120 core
SCOP superfamily Ribosome inactivating proteins (RIP)
SCOP superfamily Monooxygenase (hydroxylase) regulatory protein
SCOP superfamily Sporulation response regulatory protein Spo0B
SCOP superfamily Ribosomal protein L9 C-domain
SCOP superfamily Homing endonucleases
SCOP superfamily Origin of replication-binding domain, RBD-like
SCOP superfamily RuBisCO, small subunit
SCOP superfamily Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
SCOP superfamily Pepsin inhibitor-3
SCOP superfamily ClpS-like
SCOP superfamily Mitochondrial glycoprotein MAM33-like
SCOP superfamily Superantigen toxins, C-terminal domain
SCOP superfamily Prion-like
SCOP superfamily RNase A-like
SCOP superfamily "Helical backbone" metal receptor
SCOP superfamily PTS system fructose IIA component-like
SCOP superfamily ATP synthase (F1-ATPase), gamma subunit
SCOP superfamily Methylglyoxal synthase-like
SCOP superfamily Lumazine synthase
SCOP superfamily SpoIIaa-like
SCOP superfamily Glycosyl hydrolases family 6, cellulases
SCOP superfamily Cyanovirin-N
SCOP superfamily Regulatory protein AraC
SCOP superfamily An insect antifreeze protein
SCOP superfamily beta-Roll
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily Outer surface protein
SCOP superfamily Carbohydrate binding domain
SCOP superfamily Nitrous oxide reductase, N-terminal domain
SCOP superfamily Sialidases
SCOP superfamily Hemopexin-like domain
SCOP superfamily Oncogene products
SCOP superfamily Avidin/streptavidin
SCOP superfamily STI-like
SCOP superfamily Agglutinin
SCOP superfamily Cytokine
SCOP superfamily TIMP-like
SCOP superfamily PDZ domain-like
SCOP superfamily SacY-like RNA-binding domain
SCOP superfamily Myosin S1 fragment, N-terminal domain
SCOP superfamily Amine oxidase catalytic domain
SCOP superfamily Baculovirus p35 protein
SCOP superfamily Spermadhesin, CUB domain
SCOP superfamily TNF-like
SCOP superfamily Virus attachment protein globular domain
SCOP superfamily gamma-Crystallin-like
SCOP superfamily Cna protein B-type domain
SCOP superfamily Starch-binding domain-like
SCOP superfamily p53-like transcription factors
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily Diphtheria toxin, C-terminal domain
SCOP superfamily Actinoxanthin-like
SCOP superfamily Immunoglobulin
SCOP superfamily Multiheme cytochromes
SCOP superfamily Moesin tail domain
SCOP superfamily Chorismate mutase II
SCOP superfamily Phospholipase C/P1 nuclease
SCOP superfamily gene 59 helicase assembly protein
SCOP superfamily Lipoxigenase
SCOP superfamily A virus capsid protein alpha-helical domain
SCOP superfamily TrpR-like
SCOP superfamily Uteroglobin-like
SCOP superfamily Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
SCOP superfamily FliG
SCOP superfamily DEATH domain
SCOP superfamily N-terminal domain of the delta subunit of the F1F0-ATP synthase
SCOP superfamily Annexin
SCOP superfamily Apolipophorin-III
SCOP superfamily Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
SCOP superfamily lambda integrase-like, N-terminal domain
SCOP superfamily IHF-like DNA-binding proteins
SCOP superfamily Transferrin receptor-like dimerisation domain
SCOP superfamily STAT
SCOP superfamily Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily lambda repressor-like DNA-binding domains
SCOP superfamily 4-helical cytokines
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily TMV-like viral coat proteins
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Apolipoprotein
SCOP superfamily T4 endonuclease V
SCOP superfamily Ribosomal protein S20
SCOP superfamily Tubulin chaperone cofactor A
SCOP superfamily C-terminal UvrC-binding domain of UvrB
SCOP superfamily HR1 repeat
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily RILP dimerisation region
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily MetI-like
SCOP superfamily ATP synthase D chain-like
SCOP superfamily ATP synthase B chain-like
SCOP superfamily Photosystem II reaction center protein M, PsbM
SCOP superfamily Viral glycoprotein ectodomain-like
SCOP superfamily flu NP-like
SCOP superfamily SSO1389-like
SCOP superfamily AF1531-like
SCOP superfamily Poly(A) polymerase catalytic subunit-like
SCOP superfamily YacF-like
SCOP superfamily PH0156-like
SCOP superfamily NE1680-like
SCOP superfamily YehR-like
SCOP superfamily NMB0513-like
SCOP superfamily BLRF2-like
SCOP superfamily BH3703-like
SCOP superfamily MTH889-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily NMB0488-like
SCOP superfamily YcgL-like
SCOP superfamily XCC0632-like
SCOP superfamily SO1590-like
SCOP superfamily FomD-like
SCOP superfamily YkvR-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily PMT central region-like
SCOP superfamily AGR C 984p-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily PSPTO4464-like
SCOP superfamily TerB-like
SCOP superfamily MtlR-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily BH3980-like
SCOP superfamily TAFH domain-like
SCOP superfamily BH2638-like
SCOP superfamily PG0775 C-terminal domain-like
SCOP superfamily Bacillus cereus metalloprotein-like
SCOP superfamily HP0062-like
SCOP superfamily TM1646-like
SCOP superfamily Efb C-domain-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily Heterotrimerisation domain of extracellular hemoglobin linker subunits
SCOP superfamily Coronavirus NSP10-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily YwmB-like
SCOP superfamily ApbE-like
SCOP superfamily STIV B116-like
SCOP superfamily GAS2 domain-like
SCOP superfamily Coronavirus NSP8-like
SCOP superfamily YktB/PF0168-like
SCOP superfamily ComB-like
SCOP superfamily AF2212/PG0164-like
SCOP superfamily BH3618-like
SCOP superfamily GatD N-terminal domain-like
SCOP superfamily Kinase-associated protein B-like
SCOP superfamily Agglutinin HPA-like
SCOP superfamily CalX-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily IpaD-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily EF2947-like
SCOP superfamily Type III secretion system domain
SCOP superfamily HIV integrase-binding domain
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily FlgN-like
SCOP superfamily TM0693-like
SCOP superfamily BAS1536-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily Vng1086c-like
SCOP superfamily Coronavirus NSP7-like
SCOP superfamily MxiH-like
SCOP superfamily Calcyclin-binding protein-like
SCOP superfamily Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain
SCOP superfamily Expressed protein At2g23090/F21P24.15
SCOP superfamily Viral ssDNA binding protein
SCOP superfamily RalF, C-terminal domain
SCOP superfamily Hypothetical protein PA1324
SCOP superfamily LEA14-like
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily RNA-binding protein She2p
SCOP superfamily EspA/CesA-like
SCOP superfamily Hypothetical protein YqbG
SCOP superfamily Hypothetical membrane protein Ta0354, soluble domain
SCOP superfamily XseB-like
SCOP superfamily DNA methylase specificity domain
SCOP superfamily TrkA C-terminal domain-like
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily YAP1 redox domain
SCOP superfamily OmpH-like
SCOP superfamily VP4 membrane interaction domain
SCOP superfamily Mitochondrial ATP synthase coupling factor 6
SCOP superfamily Recombination protein RecR
SCOP superfamily Sulfolobus fructose-1,6-bisphosphatase-like
SCOP superfamily DNA-binding protein LAG-1 (CSL)
SCOP superfamily GDNF receptor-like
SCOP superfamily Her-1
SCOP superfamily Hypothetical protein MG354
SCOP superfamily Triger factor/SurA peptide-binding domain-like
SCOP superfamily Hypothetical protein At3g22680
SCOP superfamily Hypothetical protein YhaI
SCOP superfamily DinB/YfiT-like putative metalloenzymes
SCOP superfamily Domain from hypothetical 2610208m17rik protein
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily Nickel-containing superoxide dismutase, NiSOD
SCOP superfamily PhoU-like
SCOP superfamily Alpha-hemoglobin stabilizing protein AHSP
SCOP superfamily KorB DNA-binding domain-like
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily G protein-binding domain
SCOP superfamily TSP type-3 repeat
SCOP superfamily SBT domain
SCOP superfamily Plexin repeat
SCOP superfamily Chlorophyll a-b binding protein
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Preprotein translocase SecE subunit
SCOP superfamily Antivirulence factor
SCOP superfamily Hypothetical protein HI1480
SCOP superfamily KA1-like
SCOP superfamily OmpA-like
SCOP superfamily Hypothetical protein TT1725
SCOP superfamily NIF3 (NGG1p interacting factor 3)-like
SCOP superfamily Alpha-2,3/8-sialyltransferase CstII
SCOP superfamily Trimeric adhesin
SCOP superfamily Stabilizer of iron transporter SufD
SCOP superfamily Sema domain
SCOP superfamily GyrA/ParC C-terminal domain-like
SCOP superfamily Hypothetical protein YfhH
SCOP superfamily Dextranase, N-terminal domain
SCOP superfamily Fungal immunomodulatory protein, FIP
SCOP superfamily Stathmin
SCOP superfamily Hsp90 co-chaperone CDC37
SCOP superfamily Superantigen MAM
SCOP superfamily KaiA/RbsU domain
SCOP superfamily Docking domain B of the erythromycin polyketide synthase (DEBS)
SCOP superfamily Plant invertase/pectin methylesterase inhibitor
SCOP superfamily Flagellar export chaperone FliS
SCOP superfamily Staphylocoagulase
SCOP superfamily Typo IV secretion system protein TraC

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.