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  Home > Genomes > Superfamily assignments for Apis mellifera 38.2d


Apis mellifera 38.2d superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Holometabola; Hymenoptera; Apocrita; Aculeata; Apoidea; Apidae; Apinae; Apini; Apis; Apis mellifera

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 27755 total
16426 (59 %) with assignment
361 average length
52 % amino acid coverage
Domains: 30043 total
973 unique superfamilies
819 unique families
315 average length
30.9 average superfamily size
97 % formed by duplication
Domain combinations: 1006 domain pairs
3569 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
2026 1483 177 12 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
1273 373 95 0 SCOP 57667 beta-beta-alpha zinc fingers
1147 323 117 0 SCOP 48726 Immunoglobulin
745 159 119 0 SCOP 57196 EGF/Laminin
700 68 43 0 SCOP 49313 Cadherin-like
694 685 100 3 SCOP 56112 Protein kinase-like (PK-like)
491 481 10 0 SCOP 103473 MFS general substrate transporter
472 392 67 15 SCOP 48371 ARM repeat
389 45 29 1 SCOP 46966 Spectrin repeat
373 350 49 1 SCOP 50978 WD40 repeat-like
370 359 34 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
366 117 43 9 SCOP 81296 E set domains
365 277 48 1 SCOP 54928 RNA-binding domain, RBD
363 316 41 4 SCOP 46689 Homeodomain-like
361 135 74 1 SCOP 49265 Fibronectin type III
357 242 76 2 SCOP 52058 L domain-like
348 193 52 1 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
334 291 136 9 SCOP 50729 PH domain-like
323 64 54 0 SCOP 57424 LDL receptor-like module
313 205 46 2 SCOP 48452 TPR-like
303 137 105 1 SCOP 57184 Growth factor receptor domain
279 235 54 4 SCOP 47473 EF-hand
278 272 14 1 SCOP 81321 Family A G protein-coupled receptor-like
257 140 32 0 SCOP 81324 Voltage-gated potassium channels
239 227 16 2 SCOP 50494 Trypsin-like serine proteases
238 236 9 9 SCOP 53474 alpha/beta-Hydrolases
230 219 8 1 SCOP 48264 Cytochrome P450
228 186 49 1 SCOP 48403 Ankyrin repeat
214 147 64 4 SCOP 54236 Ubiquitin-like
213 44 30 0 SCOP 49854 Spermadhesin, CUB domain
205 131 67 4 SCOP 49899 Concanavalin A-like lectins/glucanases
203 132 55 1 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
199 127 57 1 SCOP 50156 PDZ domain-like
195 190 37 10 SCOP 46785 "Winged helix" DNA-binding domain
194 178 56 4 SCOP 57850 RING/U-box
183 61 35 0 SCOP 82895 TSP-1 type 1 repeat
180 173 14 11 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
175 146 58 1 SCOP 50044 SH3-domain
165 130 18 2 SCOP 52833 Thioredoxin-like
162 98 10 1 SCOP 90123 ABC transporter transmembrane region
159 156 28 6 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
159 151 33 2 SCOP 54695 POZ domain
152 137 23 5 SCOP 51905 FAD/NAD(P)-binding domain
142 139 8 6 SCOP 53383 PLP-dependent transferases
134 121 24 8 SCOP 51445 (Trans)glycosidases
132 100 47 2 SCOP 57903 FYVE/PHD zinc finger
130 111 38 5 SCOP 50249 Nucleic acid-binding proteins
130 129 22 8 SCOP 54001 Cysteine proteinases
130 67 26 0 SCOP 57625 Invertebrate chitin-binding proteins
126 103 30 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
125 125 19 10 SCOP 56784 HAD-like
122 122 3 1 SCOP 103506 Mitochondrial carrier
113 113 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
109 51 22 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
108 101 14 2 SCOP 53850 Periplasmic binding protein-like II
105 102 10 8 SCOP 53448 Nucleotide-diphospho-sugar transferases
104 104 3 1 SCOP 81342 Transmembrane di-heme cytochromes
101 66 11 4 SCOP 53067 Actin-like ATPase domain
87 83 4 3 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
86 82 30 1 SCOP 47576 Calponin-homology domain, CH-domain
86 76 27 1 SCOP 55550 SH2 domain
85 85 21 5 SCOP 53098 Ribonuclease H-like
85 85 14 1 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
84 64 11 1 SCOP 55073 Nucleotide cyclase
84 84 14 1 SCOP 53822 Periplasmic binding protein-like I
84 35 25 1 SCOP 63825 YWTD domain
83 48 9 0 SCOP 49503 Cupredoxins
82 75 9 1 SCOP 56801 Acetyl-CoA synthetase-like
81 81 34 2 SCOP 48350 GTPase activation domain, GAP
78 73 32 6 SCOP 49785 Galactose-binding domain-like
78 78 23 3 SCOP 52047 RNI-like
78 50 15 0 SCOP 55785 PYP-like sensor domain (PAS domain)
76 56 19 1 SCOP 51206 cAMP-binding domain-like
76 45 9 3 SCOP 47954 Cyclin-like
74 74 16 4 SCOP 52374 Nucleotidylyl transferase
73 73 15 1 SCOP 81665 Calcium ATPase, transmembrane domain M
72 38 21 0 SCOP 51045 WW domain
71 71 3 0 SCOP 63712 Nicotinic receptor ligand binding domain-like
71 54 21 1 SCOP 47769 SAM/Pointed domain
69 59 18 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
69 69 20 3 SCOP 103657 BAR/IMD domain-like
69 16 15 0 SCOP 57535 Complement control module/SCR domain
68 67 17 1 SCOP 46565 Chaperone J-domain
67 67 5 1 SCOP 90112 Neurotransmitter-gated ion-channel transmembrane pore
66 64 10 1 SCOP 54373 FAD-linked reductases, C-terminal domain
66 42 24 1 SCOP 63748 Tudor/PWWP/MBT
65 65 11 1 SCOP 81653 Calcium ATPase, transduction domain A
64 44 8 3 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
64 53 16 0 SCOP 100895 Kazal-type serine protease inhibitors
63 54 10 3 SCOP 53187 Zn-dependent exopeptidases
63 62 5 0 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
63 63 9 1 SCOP 48508 Nuclear receptor ligand-binding domain
62 59 37 1 SCOP 48065 DBL homology domain (DH-domain)
61 61 4 2 SCOP 53649 Alkaline phosphatase-like
61 19 19 0 SCOP 90148 DPY module
59 59 7 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
59 59 11 1 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
58 56 21 6 SCOP 54211 Ribosomal protein S5 domain 2-like
58 39 10 2 SCOP 56436 C-type lectin-like
58 58 7 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
56 46 21 1 SCOP 57997 Tropomyosin
55 55 8 8 SCOP 51556 Metallo-dependent hydrolases
54 54 1 1 SCOP 48576 Terpenoid synthases
54 14 5 1 SCOP 81698 FF domain
52 52 16 2 SCOP 55681 Class II aaRS and biotin synthetases
52 52 6 3 SCOP 53254 Phosphoglycerate mutase-like
52 15 10 0 SCOP 57362 BPTI-like
51 51 16 2 SCOP 50447 Translation proteins
51 23 6 1 SCOP 63411 LuxS/MPP-like metallohydrolase
51 8 8 0 SCOP 57581 TB module/8-cys domain
50 49 24 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
50 38 10 0 SCOP 54556 Chitinase insertion domain
49 44 7 5 SCOP 100950 NagB/RpiA/CoA transferase-like
49 49 9 2 SCOP 47113 Histone-fold
49 49 8 2 SCOP 54495 UBC-like
49 47 6 1 SCOP 52490 Tubulin nucleotide-binding domain-like
49 28 10 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
48 48 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
48 27 8 1 SCOP 54980 EF-G C-terminal domain-like
48 45 6 0 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
47 44 3 1 SCOP 161070 SNF-like
47 31 10 2 SCOP 52777 CoA-dependent acyltransferases
47 17 10 0 SCOP 90257 Myosin rod fragments
46 33 18 0 SCOP 57889 Cysteine-rich domain
45 45 3 1 SCOP 51069 Carbonic anhydrase
45 45 9 1 SCOP 82171 DPP6 N-terminal domain-like
44 44 15 1 SCOP 81383 F-box domain
44 32 15 0 SCOP 90229 CCCH zinc finger
44 39 21 1 SCOP 47370 Bromodomain
43 16 5 1 SCOP 55753 Actin depolymerizing proteins
42 42 7 2 SCOP 56300 Metallo-dependent phosphatases
42 36 12 1 SCOP 117281 Kelch motif
42 13 11 0 SCOP 57603 FnI-like domain
41 37 10 1 SCOP 50985 RCC1/BLIP-II
41 39 7 1 SCOP 48113 Heme-dependent peroxidases
41 27 9 1 SCOP 53901 Thiolase-like
41 23 6 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
41 31 13 2 SCOP 52440 PreATP-grasp domain
41 24 14 1 SCOP 54768 dsRNA-binding domain-like
41 27 15 0 SCOP 52113 BRCT domain
41 38 24 1 SCOP 47031 Second domain of FERM
40 40 15 2 SCOP 53300 vWA-like
40 40 3 1 SCOP 55307 Tubulin C-terminal domain-like
39 39 10 3 SCOP 56672 DNA/RNA polymerases
39 39 21 0 SCOP 46934 UBA-like
38 34 4 3 SCOP 52096 ClpP/crotonase
38 38 7 2 SCOP 74650 Galactose mutarotase-like
38 38 12 1 SCOP 52087 CRAL/TRIO domain
38 25 10 0 SCOP 57756 Retrovirus zinc finger-like domains
37 37 5 1 SCOP 49764 HSP20-like chaperones
37 37 17 1 SCOP 82199 SET domain
36 36 3 1 SCOP 51430 NAD(P)-linked oxidoreductase
36 36 4 0 SCOP 48652 Tetraspanin
35 32 11 1 SCOP 58038 SNARE fusion complex
35 31 9 2 SCOP 47413 lambda repressor-like DNA-binding domains
34 34 11 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
34 34 11 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
34 34 8 3 SCOP 64356 SNARE-like
34 34 5 2 SCOP 48208 Six-hairpin glycosidases
34 34 8 1 SCOP 47616 GST C-terminal domain-like
34 16 8 0 SCOP 69179 Integrin domains
33 33 12 2 SCOP 49879 SMAD/FHA domain
32 32 1 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
32 29 7 1 SCOP 50129 GroES-like
32 32 10 1 SCOP 88713 Glycoside hydrolase/deacetylase
32 22 12 2 SCOP 54160 Chromo domain-like
31 30 6 1 SCOP 47095 HMG-box
31 31 10 1 SCOP 50891 Cyclophilin-like
31 31 9 1 SCOP 101898 NHL repeat
31 31 14 1 SCOP 56204 Hect, E3 ligase catalytic domain
30 24 4 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
30 30 5 0 SCOP 46938 CRAL/TRIO N-terminal domain
29 29 10 0 SCOP 51197 Clavaminate synthase-like
29 29 17 1 SCOP 64268 PX domain
29 29 5 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
28 28 5 3 SCOP 52317 Class I glutamine amidotransferase-like
28 28 8 2 SCOP 109604 HD-domain/PDEase-like
28 16 5 1 SCOP 55781 GAF domain-like
28 25 4 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
28 16 10 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
28 21 9 0 SCOP 90209 Ran binding protein zinc finger-like
28 28 12 0 SCOP 144232 HIT/MYND zinc finger-like
28 9 7 2 SCOP 47220 alpha-catenin/vinculin-like
27 27 6 3 SCOP 48464 ENTH/VHS domain
26 26 2 1 SCOP 81338 Aquaporin-like
26 26 6 2 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
26 9 7 0 SCOP 55008 HMA, heavy metal-associated domain
26 26 6 3 SCOP 55961 Bet v1-like
26 25 5 1 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
26 26 7 1 SCOP 69318 Integrin alpha N-terminal domain
26 26 12 1 SCOP 48366 Ras GEF
26 10 2 1 SCOP 53738 Phosphoglucomutase, first 3 domains
26 16 7 1 SCOP 74924 Cap-Gly domain
25 25 11 1 SCOP 51695 PLC-like phosphodiesterases
25 14 5 0 SCOP 47781 RuvA domain 2-like
25 25 7 1 SCOP 52743 Subtilisin-like
25 25 9 0 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
25 25 6 5 SCOP 49417 p53-like transcription factors
25 25 8 1 SCOP 101912 Sema domain
25 23 15 1 SCOP 48097 Regulator of G-protein signaling, RGS
25 25 9 1 SCOP 48425 Sec7 domain
25 25 8 0 SCOP 57959 Leucine zipper domain
24 22 6 1 SCOP 81606 PP2C-like
24 24 4 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
24 16 4 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
24 15 5 0 SCOP 49464 Carboxypeptidase regulatory domain-like
24 24 10 2 SCOP 63380 Riboflavin synthase domain-like
24 10 7 0 SCOP 46585 HR1 repeat
23 23 2 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
23 23 4 1 SCOP 53720 ALDH-like
23 23 2 0 SCOP 54897 Protease propeptides/inhibitors
23 23 9 2 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
23 23 4 1 SCOP 48592 GroEL equatorial domain-like
22 22 3 4 SCOP 51569 Aldolase
22 22 11 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
22 22 6 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
22 14 5 0 SCOP 56968 Lipovitellin-phosvitin complex; beta-sheet shell regions
21 21 7 1 SCOP 55920 Creatinase/aminopeptidase
21 21 10 1 SCOP 52954 Class II aaRS ABD-related
21 21 9 1 SCOP 51230 Single hybrid motif
21 21 6 3 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
21 21 5 2 SCOP 52029 GroEL apical domain-like
21 21 5 0 SCOP 49410 Alpha-macroglobulin receptor domain
21 17 6 1 SCOP 140741 RUN domain-like
21 21 9 0 SCOP 103575 Plexin repeat
21 21 4 0 SCOP 158457 Orange domain-like
20 20 5 1 SCOP 55811 Nudix
20 20 4 1 SCOP 50182 Sm-like ribonucleoproteins
20 20 8 2 SCOP 56219 DNase I-like
20 20 12 2 SCOP 88697 PUA domain-like
20 20 3 1 SCOP 50370 Ricin B-like lectins
20 20 2 1 SCOP 56327 LDH C-terminal domain-like
20 20 3 1 SCOP 57501 Cystine-knot cytokines
20 11 4 0 SCOP 57440 Kringle-like
20 13 7 0 SCOP 50911 Mannose 6-phosphate receptor domain
19 19 5 1 SCOP 55120 Pseudouridine synthase
19 18 5 1 SCOP 51161 Trimeric LpxA-like enzymes
19 19 4 1 SCOP 51395 FMN-linked oxidoreductases
19 19 5 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
19 19 7 0 SCOP 52151 FabD/lysophospholipase-like
19 19 2 1 SCOP 52922 TK C-terminal domain-like
19 19 10 0 SCOP 57845 B-box zinc-binding domain
19 19 6 1 SCOP 88688 Families 57/38 glycoside transferase middle domain
18 18 5 2 SCOP 53697 SIS domain
18 17 5 3 SCOP 54197 HIT-like
18 18 7 1 SCOP 88723 PIN domain-like
18 18 4 2 SCOP 55931 Glutamine synthetase/guanido kinase
18 9 6 1 SCOP 81901 HCP-like
18 11 2 1 SCOP 55979 DNA clamp
18 18 1 1 SCOP 48019 post-AAA+ oligomerization domain-like
18 14 8 1 SCOP 158702 Sec63 N-terminal domain-like
18 10 5 1 SCOP 82109 MIR domain
18 12 7 1 SCOP 109905 Surp module (SWAP domain)
18 18 2 0 SCOP 57552 Blood coagulation inhibitor (disintegrin)
17 11 7 0 SCOP 47060 S15/NS1 RNA-binding domain
17 17 4 1 SCOP 102114 Radical SAM enzymes
17 17 2 1 SCOP 56655 Carbohydrate phosphatase
17 14 5 1 SCOP 54534 FKBP-like
17 17 8 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
17 12 4 1 SCOP 54631 CBS-domain pair
17 17 9 2 SCOP 46955 Putative DNA-binding domain
17 17 3 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
17 15 3 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
17 17 14 1 SCOP 52200 Toll/Interleukin receptor TIR domain
17 17 6 1 SCOP 47661 t-snare proteins
17 17 4 1 SCOP 48225 Seven-hairpin glycosidases
17 9 4 1 SCOP 49742 PHM/PNGase F
17 17 2 0 SCOP 54849 GroEL-intermediate domain like
16 16 2 1 SCOP 161098 MetI-like
16 16 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
16 10 4 1 SCOP 55298 YjgF-like
16 16 5 2 SCOP 56104 SAICAR synthase-like
16 16 4 0 SCOP 63829 Calcium-dependent phosphotriesterase
16 16 1 1 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
16 16 2 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
16 16 7 1 SCOP 81301 Nucleotidyltransferase
16 9 5 1 SCOP 82153 FAS1 domain
16 15 4 1 SCOP 55804 Phoshotransferase/anion transport protein
16 16 3 1 SCOP 55846 N-acetylmuramoyl-L-alanine amidase-like
16 16 2 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
16 16 4 3 SCOP 49348 Clathrin adaptor appendage domain
16 16 6 0 SCOP 57302 Snake toxin-like
16 16 6 0 SCOP 47986 DEATH domain
16 16 6 1 SCOP 101690 PAZ domain
16 9 4 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
15 15 2 1 SCOP 75304 Amidase signature (AS) enzymes
15 15 5 3 SCOP 54427 NTF2-like
15 15 4 0 SCOP 52266 SGNH hydrolase
15 15 2 0 SCOP 55021 ACT-like
15 15 2 1 SCOP 56534 Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
15 15 3 1 SCOP 56574 Serpins
15 15 5 0 SCOP 52075 Outer arm dynein light chain 1
15 15 3 1 SCOP 117892 Band 7/SPFH domain
15 15 4 0 SCOP 111418 Hormone receptor domain
15 14 3 1 SCOP 47895 Transducin (alpha subunit), insertion domain
15 12 7 1 SCOP 49599 TRAF domain-like
15 5 5 0 SCOP 90193 Notch domain
14 14 2 2 SCOP 53613 Ribokinase-like
14 14 5 1 SCOP 50104 Translation proteins SH3-like domain
14 14 3 0 SCOP 46579 Prefoldin
14 11 4 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
14 14 1 0 SCOP 52091 SpoIIaa-like
14 14 2 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
14 14 3 1 SCOP 50814 Lipocalins
14 8 5 1 SCOP 56024 Phospholipase D/nuclease
14 14 6 1 SCOP 51246 Rudiment single hybrid motif
14 14 2 0 SCOP 81336 F1F0 ATP synthase subunit A
14 14 7 1 SCOP 57863 ArfGap/RecO-like zinc finger
14 14 2 1 SCOP 47565 Insect pheromone/odorant-binding proteins
13 13 2 2 SCOP 47240 Ferritin-like
13 13 5 0 SCOP 47336 ACP-like
13 13 3 0 SCOP 144091 Rhomboid-like
13 11 5 0 SCOP 161111 Cation efflux protein transmembrane domain-like
13 13 7 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
13 13 3 0 SCOP 53092 Creatinase/prolidase N-terminal domain
13 13 4 0 SCOP 48431 Lipovitellin-phosvitin complex, superhelical domain
13 13 6 1 SCOP 74788 Cullin repeat-like
13 13 3 1 SCOP 56366 SMAD MH1 domain
13 13 9 1 SCOP 46774 ARID-like
13 13 5 1 SCOP 111347 Rap/Ran-GAP
13 13 5 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
13 6 3 0 SCOP 57414 Hairpin loop containing domain-like
13 8 3 0 SCOP 143791 DUSP-like
13 9 3 0 SCOP 57567 Serine protease inhibitors
13 13 1 1 SCOP 100910 Chemosensory protein Csp2
13 13 3 1 SCOP 49758 Calpain large subunit, middle domain (domain III)
12 10 5 2 SCOP 53271 PRTase-like
12 12 4 2 SCOP 53927 Cytidine deaminase-like
12 12 4 0 SCOP 55174 Alpha-L RNA-binding motif
12 12 1 1 SCOP 50475 FMN-binding split barrel
12 12 2 0 SCOP 144122 Tim10-like
12 12 3 1 SCOP 48256 Citrate synthase
12 12 1 1 SCOP 56815 Sec1/munc18-like (SM) proteins
12 12 1 1 SCOP 54648 DLC
12 12 4 1 SCOP 56317 Carbon-nitrogen hydrolase
12 10 6 0 SCOP 57783 Zinc beta-ribbon
12 12 6 2 SCOP 52467 DHS-like NAD/FAD-binding domain
12 8 5 0 SCOP 69065 RNase III domain-like
12 12 2 1 SCOP 118215 Proton glutamate symport protein
12 12 2 0 SCOP 53041 Resolvase-like
12 12 5 1 SCOP 56176 FAD-binding/transporter-associated domain-like
12 12 2 1 SCOP 48619 Phospholipase A2, PLA2
12 6 1 1 SCOP 141072 CalX-like
12 11 3 1 SCOP 48445 14-3-3 protein
12 8 4 1 SCOP 57924 Inhibitor of apoptosis (IAP) repeat
12 12 3 1 SCOP 144074 E2F-DP heterodimerization region
12 4 1 1 SCOP 47762 PAH2 domain
12 7 4 0 SCOP 103637 CCHHC domain
12 12 4 0 SCOP 158235 SOCS box-like
11 11 3 1 SCOP 52166 Ribosomal protein L4
11 11 1 1 SCOP 48557 L-aspartase-like
11 11 3 1 SCOP 54292 2Fe-2S ferredoxin-like
11 11 1 1 SCOP 55418 eIF4e-like
11 11 3 2 SCOP 52768 Arginase/deacetylase
11 11 2 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
11 11 4 1 SCOP 52335 Methylglyoxal synthase-like
11 6 4 0 SCOP 49452 Starch-binding domain-like
11 11 4 1 SCOP 158832 Tex N-terminal region-like
11 11 5 0 SCOP 69989 C-terminal domain of PLC-beta
11 11 1 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
11 11 6 1 SCOP 51011 Glycosyl hydrolase domain
11 11 5 0 SCOP 68906 SAP domain
11 4 4 0 SCOP 57610 Thyroglobulin type-1 domain
11 11 2 1 SCOP 47874 Annexin
11 11 7 0 SCOP 101288 L27 domain
10 10 4 1 SCOP 52821 Rhodanese/Cell cycle control phosphatase
10 10 1 1 SCOP 56796 Dehydroquinate synthase-like
10 10 1 0 SCOP 82282 Homocysteine S-methyltransferase
10 10 3 1 SCOP 56349 DNA breaking-rejoining enzymes
10 10 3 1 SCOP 53732 Aconitase iron-sulfur domain
10 3 3 0 SCOP 50199 Staphylococcal nuclease
10 10 4 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
10 10 8 0 SCOP 50965 Galactose oxidase, central domain
10 10 5 1 SCOP 48056 Di-copper centre-containing domain
10 9 5 1 SCOP 56042 PurM C-terminal domain-like
10 9 3 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
10 10 5 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
10 10 3 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
10 10 8 1 SCOP 109993 VPS9 domain
10 10 4 1 SCOP 75632 Cullin homology domain
10 6 5 0 SCOP 49309 Transglutaminase, two C-terminal domains
10 10 4 1 SCOP 63501 Frizzled cysteine-rich domain
10 10 3 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
9 7 4 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
9 9 4 2 SCOP 46626 Cytochrome c
9 9 2 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
9 9 3 2 SCOP 51182 RmlC-like cupins
9 9 4 1 SCOP 55797 PR-1-like
9 9 8 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
9 9 1 0 SCOP 64288 Chorismate lyase-like
9 9 2 1 SCOP 89124 Nop domain
9 9 1 1 SCOP 55287 RPB5-like RNA polymerase subunit
9 5 2 0 SCOP 161093 MgtE membrane domain-like
9 9 4 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
9 9 4 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
9 8 4 1 SCOP 55326 PurM N-terminal domain-like
9 9 4 1 SCOP 81631 PAP/OAS1 substrate-binding domain
9 9 1 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
9 9 3 1 SCOP 81271 TGS-like
9 9 2 0 SCOP 46596 Eukaryotic DNA topoisomerase I, dispensable insert domain
9 9 5 1 SCOP 116846 MIT domain
9 7 7 0 SCOP 56487 SRCR-like
9 3 2 1 SCOP 109885 I/LWEQ domain
9 9 4 0 SCOP 48050 Hemocyanin, N-terminal domain
9 9 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
9 9 2 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
9 9 2 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
9 9 3 2 SCOP 89009 GAT-like domain
8 8 1 1 SCOP 56420 Peptide deformylase
8 8 5 1 SCOP 54862 4Fe-4S ferredoxins
8 8 3 2 SCOP 55315 L30e-like
8 8 4 1 SCOP 144000 Oxysterol-binding protein-like
8 7 4 2 SCOP 47819 HRDC-like
8 8 4 0 SCOP 55718 SCP-like
8 8 2 1 SCOP 52016 LeuD/IlvD-like
8 8 4 1 SCOP 50692 ADC-like
8 8 5 1 SCOP 47592 SWIB/MDM2 domain
8 8 2 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
8 8 2 1 SCOP 56003 Molybdenum cofactor-binding domain
8 8 3 0 SCOP 81995 beta-sandwich domain of Sec23/24
8 8 1 1 SCOP 52129 Caspase-like
8 8 4 1 SCOP 51971 Nucleotide-binding domain
8 8 4 1 SCOP 52210 Succinyl-CoA synthetase domains
8 8 2 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
8 8 2 1 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
8 8 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
8 8 2 1 SCOP 47741 CO dehydrogenase ISP C-domain like
8 8 1 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
8 8 2 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
8 6 3 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
8 8 3 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
8 8 5 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
8 8 2 0 SCOP 81778 Crustacean CHH/MIH/GIH neurohormone
8 6 4 0 SCOP 47862 Saposin
8 8 6 0 SCOP 75553 Smc hinge domain
8 6 4 0 SCOP 55666 Ribonuclease PH domain 2-like
8 8 3 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
8 8 3 0 SCOP 100909 IP3 receptor type 1 binding core, domain 2
8 8 2 0 SCOP 140612 EB1 dimerisation domain-like
8 8 3 1 SCOP 81811 Helical domain of Sec23/24
8 8 3 0 SCOP 82919 Zn-finger domain of Sec23/24
7 7 2 1 SCOP 53167 Purine and uridine phosphorylases
7 7 3 0 SCOP 57829 Zn-binding ribosomal proteins
7 7 2 1 SCOP 54999 Ribosomal protein S10
7 7 4 1 SCOP 52218 Flavoproteins
7 7 1 1 SCOP 56634 Heme-dependent catalase-like
7 7 2 1 SCOP 52972 ITPase-like
7 7 4 1 SCOP 56399 ADP-ribosylation
7 7 4 1 SCOP 100939 SPOC domain-like
7 4 3 1 SCOP 50405 Actin-crosslinking proteins
7 5 3 1 SCOP 159034 Mib/herc2 domain-like
7 7 3 0 SCOP 160481 BRK domain-like
7 3 2 1 SCOP 55973 S-adenosylmethionine synthetase
7 4 2 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
7 7 5 0 SCOP 48334 DNA repair protein MutS, domain III
7 7 2 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
7 5 4 1 SCOP 55945 TATA-box binding protein-like
7 7 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
7 7 4 1 SCOP 50923 Hemopexin-like domain
7 7 1 0 SCOP 111357 Mitochondrial ATP synthase coupling factor 6
7 6 6 0 SCOP 57256 Elafin-like
7 7 1 0 SCOP 50084 Myosin S1 fragment, N-terminal domain
7 7 6 0 SCOP 47454 A DNA-binding domain in eukaryotic transcription factors
7 7 3 0 SCOP 140111 Endosomal sorting complex assembly domain
7 7 3 1 SCOP 54585 Cdc48 domain 2-like
6 6 2 0 SCOP 160369 Ribosomal protein L10-like
6 6 1 3 SCOP 51316 Mss4-like
6 5 3 0 SCOP 89360 HesB-like domain
6 6 4 1 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
6 6 3 1 SCOP 52949 Macro domain-like
6 6 2 0 SCOP 51306 LexA/Signal peptidase
6 6 3 1 SCOP 48439 Protein prenylyltransferase
6 6 2 0 SCOP 53639 AraD/HMP-PK domain-like
6 4 4 0 SCOP 51126 Pectin lyase-like
6 6 1 1 SCOP 69645 Arp2/3 complex subunits
6 5 3 1 SCOP 56529 FAH
6 6 3 1 SCOP 55159 eIF1-like
6 5 3 0 SCOP 58113 Apolipoprotein A-I
6 5 2 0 SCOP 143447 AMMECR1-like
6 6 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
6 6 2 1 SCOP 53795 PEP carboxykinase-like
6 6 4 0 SCOP 102712 JAB1/MPN domain
6 6 4 1 SCOP 50022 ISP domain
6 6 3 1 SCOP 54518 Tubby C-terminal domain-like
6 6 1 2 SCOP 51604 Enolase C-terminal domain-like
6 6 3 0 SCOP 55186 ThrRS/AlaRS common domain
6 6 3 1 SCOP 46548 alpha-helical ferredoxin
6 6 2 1 SCOP 68923 PEP carboxykinase N-terminal domain
6 6 4 0 SCOP 47090 PGBD-like
6 6 2 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
6 6 2 0 SCOP 51294 Hedgehog/intein (Hint) domain
6 6 2 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
6 6 1 1 SCOP 54826 Enolase N-terminal domain-like
6 6 4 1 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
6 6 2 1 SCOP 117289 Nucleoporin domain
6 2 2 1 SCOP 103647 TSP type-3 repeat
6 3 1 1 SCOP 56053 Ribosomal protein L6
6 6 4 1 SCOP 81837 BEACH domain
6 6 4 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
6 6 3 1 SCOP 82708 R3H domain
6 6 3 0 SCOP 47391 Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
6 6 2 1 SCOP 55455 SRF-like
6 6 2 1 SCOP 116907 Hook domain
6 6 4 0 SCOP 110942 HSP90 C-terminal domain
6 6 2 0 SCOP 57546 Crisp domain-like
6 6 3 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
6 6 2 0 SCOP 143885 RGC domain-like
6 6 3 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
6 6 2 1 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
6 6 1 1 SCOP 63887 P-domain of calnexin/calreticulin
6 3 1 0 SCOP 140383 BSD domain-like
5 5 3 0 SCOP 56808 Ribosomal protein L1
5 5 1 1 SCOP 47973 Ribosomal protein S7
5 5 2 1 SCOP 52141 Uracil-DNA glycosylase-like
5 5 2 1 SCOP 54686 Ribosomal protein L16p/L10e
5 5 3 0 SCOP 52080 Ribosomal proteins L15p and L18e
5 3 2 1 SCOP 53784 Phosphofructokinase
5 5 4 0 SCOP 110324 Ribosomal L27 protein-like
5 5 1 0 SCOP 51658 Xylose isomerase-like
5 5 2 1 SCOP 82549 DAK1/DegV-like
5 5 1 1 SCOP 82649 SufE/NifU
5 3 2 0 SCOP 81333 F1F0 ATP synthase subunit C
5 5 2 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
5 3 3 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
5 4 2 1 SCOP 54060 His-Me finger endonucleases
5 5 3 0 SCOP 140718 Mediator hinge subcomplex-like
5 5 2 1 SCOP 53328 Formyltransferase
5 5 2 1 SCOP 52499 Isochorismatase-like hydrolases
5 5 2 1 SCOP 50630 Acid proteases
5 5 1 0 SCOP 47694 Cytochrome c oxidase subunit h
5 5 1 0 SCOP 53056 beta-carbonic anhydrase, cab
5 5 1 0 SCOP 161084 MAPEG domain-like
5 5 1 0 SCOP 111352 Ammonium transporter
5 5 2 0 SCOP 55154 CYTH-like phosphatases
5 5 2 1 SCOP 81340 Clc chloride channel
5 4 3 0 SCOP 53218 Molybdenum cofactor biosynthesis proteins
5 5 2 0 SCOP 54736 ClpS-like
5 5 3 1 SCOP 50800 PK beta-barrel domain-like
5 5 3 1 SCOP 52935 PK C-terminal domain-like
5 5 4 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
5 5 4 1 SCOP 140990 FtsH protease domain-like
5 5 4 0 SCOP 54171 DNA-binding domain
5 5 2 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
5 5 2 0 SCOP 90250 Troponin coil-coiled subunits
5 5 2 0 SCOP 101494 Stathmin
5 5 2 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
5 5 1 1 SCOP 101152 Mob1/phocein
5 5 3 0 SCOP 54277 CAD & PB1 domains
5 5 4 0 SCOP 48670 Transducin (heterotrimeric G protein), gamma chain
5 5 2 2 SCOP 158573 GINS helical bundle-like
5 5 3 1 SCOP 63570 PABC (PABP) domain
5 4 3 1 SCOP 117839 WWE domain
5 5 3 0 SCOP 47050 VHP, Villin headpiece domain
5 5 2 1 SCOP 101233 PWI domain
5 5 2 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
5 5 5 1 SCOP 57933 TAZ domain
5 5 2 0 SCOP 69687 Integrin beta tail domain
5 5 3 1 SCOP 68993 FAT domain of focal adhesion kinase
5 4 3 1 SCOP 109843 CAPPD, an extracellular domain of amyloid beta A4 protein
4 4 2 0 SCOP 53790 Tetrapyrrole methylase
4 4 2 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
4 4 2 0 SCOP 53137 Translational machinery components
4 4 3 1 SCOP 75217 alpha/beta knot
4 4 1 1 SCOP 51283 dUTPase-like
4 4 2 0 SCOP 50715 Ribosomal protein L25-like
4 4 4 0 SCOP 101908 Putative isomerase YbhE
4 4 1 0 SCOP 82657 BolA-like
4 4 1 1 SCOP 51419 PLP-binding barrel
4 4 2 0 SCOP 55469 FMN-dependent nitroreductase-like
4 4 3 1 SCOP 47027 Acyl-CoA binding protein
4 4 1 0 SCOP 144210 Nop10-like SnoRNP
4 4 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
4 4 1 1 SCOP 49777 PEBP-like
4 4 2 1 SCOP 64153 YjeF N-terminal domain-like
4 4 2 1 SCOP 143113 NAP-like
4 4 1 0 SCOP 69118 AhpD-like
4 4 2 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
4 4 2 0 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
4 4 1 0 SCOP 101744 Rof/RNase P subunit-like
4 4 2 1 SCOP 53955 Lysozyme-like
4 4 3 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
4 4 3 1 SCOP 103025 Folate-binding domain
4 4 1 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 4 2 0 SCOP 57802 Rubredoxin-like
4 4 1 1 SCOP 103196 Roadblock/LC7 domain
4 4 1 1 SCOP 110395 CutC-like
4 4 3 0 SCOP 143437 THUMP domain-like
4 4 2 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
4 4 2 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
4 4 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
4 4 2 1 SCOP 56719 Type II DNA topoisomerase
4 4 3 0 SCOP 55060 GHMP Kinase, C-terminal domain
4 4 2 0 SCOP 49354 PapD-like
4 1 1 0 SCOP 49299 PKD domain
4 4 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
4 4 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
4 4 2 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
4 4 2 0 SCOP 118310 AN1-like Zinc finger
4 4 2 0 SCOP 48092 Transcription factor STAT-4 N-domain
4 4 3 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
4 4 1 0 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
4 4 3 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
4 4 2 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
4 4 2 0 SCOP 64593 Intermediate filament protein, coiled coil region
4 4 4 1 SCOP 54511 GFP-like
4 4 4 1 SCOP 47040 Kix domain of CBP (creb binding protein)
4 4 2 1 SCOP 50916 Rap30/74 interaction domains
4 4 3 0 SCOP 46942 Elongation factor TFIIS domain 2
4 4 2 1 SCOP 48678 Moesin tail domain
4 4 1 0 SCOP 89000 post-HMGL domain-like
4 4 1 1 SCOP 159042 Plus3-like
4 2 2 0 SCOP 110035 GDNF receptor-like
4 4 4 1 SCOP 63763 SAND domain-like
4 4 3 0 SCOP 158553 TAFH domain-like
4 4 2 0 SCOP 64586 C-terminal domain of ProRS
4 4 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
4 4 3 0 SCOP 158230 PRP4-like
3 3 2 2 SCOP 51366 Ribulose-phoshate binding barrel
3 3 1 1 SCOP 75620 Release factor
3 3 2 0 SCOP 52980 Restriction endonuclease-like
3 3 1 1 SCOP 51713 tRNA-guanine transglycosylase
3 3 1 1 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
3 3 1 1 SCOP 56019 The spindle assembly checkpoint protein mad2
3 3 1 1 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
3 3 1 0 SCOP 47072 Cysteine alpha-hairpin motif
3 3 1 1 SCOP 55909 Pentein
3 3 1 0 SCOP 49478 Cna protein B-type domain
3 2 2 0 SCOP 54909 Dimeric alpha+beta barrel
3 3 1 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
3 3 1 1 SCOP 55166 Hedgehog/DD-peptidase
3 3 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
3 3 1 1 SCOP 110857 Gamma-glutamyl cyclotransferase-like
3 3 1 0 SCOP 158997 Trm112p-like
3 3 1 1 SCOP 82544 GckA/TtuD-like
3 3 1 0 SCOP 160909 ATP12-like
3 3 1 1 SCOP 110581 Indigoidine synthase A-like
3 3 3 0 SCOP 69322 Tricorn protease domain 2
3 3 2 1 SCOP 101473 DhaL-like
3 3 1 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
3 3 2 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
3 3 1 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
3 3 2 0 SCOP 160631 SMI1/KNR4-like
3 3 1 1 SCOP 74784 Translin
3 3 2 1 SCOP 54984 eEF-1beta-like
3 3 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
3 3 1 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
3 3 2 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
3 3 2 0 SCOP 54106 LysM domain
3 3 2 1 SCOP 142877 EndoU-like
3 3 2 0 SCOP 118116 DNA mismatch repair protein MutL
3 3 1 0 SCOP 49842 TNF-like
3 3 2 0 SCOP 141673 MOSC N-terminal domain-like
3 3 2 0 SCOP 142984 Nqo1 middle domain-like
3 3 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
3 3 1 0 SCOP 74853 Lamin A/C globular tail domain
3 3 1 0 SCOP 81891 Poly A polymerase C-terminal region-like
3 3 1 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
3 3 1 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
3 3 2 1 SCOP 56496 Fibrinogen C-terminal domain-like
3 3 2 1 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
3 3 1 0 SCOP 47794 Rad51 N-terminal domain-like
3 3 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
3 3 1 1 SCOP 47446 Signal peptide-binding domain
3 3 1 1 SCOP 160696 BTG domain-like
3 3 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
3 3 1 1 SCOP 50723 Core binding factor beta, CBF
3 3 2 0 SCOP 89837 Doublecortin (DC)
3 3 1 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
3 3 2 0 SCOP 64602 F1 ATPase inhibitor, IF1, C-terminal domain
3 3 2 0 SCOP 63491 BAG domain
3 3 2 1 SCOP 142019 Nqo1 FMN-binding domain-like
3 3 2 0 SCOP 54368 Glutamine synthetase, N-terminal domain
3 2 2 0 SCOP 57262 Leech antihemostatic proteins
3 3 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
3 3 1 1 SCOP 89942 eEF1-gamma domain
3 3 2 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
3 3 1 0 SCOP 109715 DEK C-terminal domain
3 3 1 1 SCOP 50989 Clathrin heavy-chain terminal domain
3 3 1 1 SCOP 81382 Skp1 dimerisation domain-like
3 3 1 0 SCOP 118370 Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain
3 3 1 1 SCOP 48034 Guanido kinase N-terminal domain
3 3 2 0 SCOP 89811 Amyloid beta a4 protein copper binding domain (domain 2)
3 3 1 0 SCOP 47655 STAT
3 2 2 0 SCOP 47045 RAP domain-like
3 3 1 0 SCOP 140996 Hermes dimerisation domain
3 3 2 0 SCOP 82615 Polo-box domain
3 3 2 0 SCOP 161245 Zinc hairpin stack
3 3 3 0 SCOP 116878 TrmE connector domain
3 3 2 0 SCOP 56491 A heparin-binding domain
3 3 2 0 SCOP 53150 DNA repair protein MutS, domain II
3 3 1 0 SCOP 140482 MAST3 pre-PK domain-like
2 2 1 0 SCOP 46911 Ribosomal protein S18
2 2 2 0 SCOP 54843 Ribosomal protein L22
2 2 1 1 SCOP 50193 Ribosomal protein L14
2 2 1 1 SCOP 56047 Ribosomal protein S8
2 2 1 1 SCOP 103491 Preprotein translocase SecY subunit
2 2 1 0 SCOP 64182 DHH phosphoesterases
2 2 1 1 SCOP 53597 Dihydrofolate reductase-like
2 2 1 1 SCOP 53748 Phosphoglycerate kinase
2 2 1 1 SCOP 47729 IHF-like DNA-binding proteins
2 2 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
2 2 1 0 SCOP 52161 Ribosomal protein L13
2 2 1 0 SCOP 53633 Carbamate kinase-like
2 2 1 0 SCOP 54565 Ribosomal protein S16
2 2 1 1 SCOP 69765 IpsF-like
2 2 1 0 SCOP 51730 FAD-linked oxidoreductase
2 2 1 1 SCOP 111337 QueA-like
2 2 1 1 SCOP 56770 HydA/Nqo6-like
2 2 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
2 2 2 0 SCOP 64005 Undecaprenyl diphosphate synthase
2 2 2 0 SCOP 54285 MoaD/ThiS
2 2 1 0 SCOP 55205 EPT/RTPC-like
2 2 2 0 SCOP 55129 Ribosomal protein L30p/L7e
2 2 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
2 2 1 0 SCOP 48613 Heme oxygenase-like
2 2 1 0 SCOP 141678 MAL13P1.257-like
2 2 1 1 SCOP 102886 Coproporphyrinogen III oxidase
2 2 1 1 SCOP 51726 UROD/MetE-like
2 2 1 0 SCOP 53590 Nucleoside hydrolase
2 2 1 1 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 1 1 SCOP 57798 Casein kinase II beta subunit
2 2 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
2 2 1 0 SCOP 63393 RNA polymerase subunits
2 2 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
2 2 1 0 SCOP 161219 CHY zinc finger-like
2 2 1 0 SCOP 143870 PF0523-like
2 2 1 0 SCOP 55257 RBP11-like subunits of RNA polymerase
2 2 2 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
2 2 2 1 SCOP 53800 Chelatase
2 2 1 0 SCOP 101478 ADP-ribosylglycohydrolase
2 2 2 0 SCOP 111038 YjbQ-like
2 2 1 0 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
2 2 1 1 SCOP 143422 Transposase IS200-like
2 2 1 1 SCOP 51998 PFL-like glycyl radical enzymes
2 2 1 0 SCOP 141571 Pentapeptide repeat-like
2 2 1 1 SCOP 118196 YaeB-like
2 2 2 0 SCOP 58100 Bacterial hemolysins
2 2 2 1 SCOP 56762 HydB/Nqo4-like
2 2 1 1 SCOP 117856 AF0104/ALDC/Ptd012-like
2 2 2 0 SCOP 50242 TIMP-like
2 2 1 1 SCOP 55200 Translation initiation factor IF3, C-terminal domain
2 2 2 0 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
2 2 1 0 SCOP 81330 Gated mechanosensitive channel
2 2 1 0 SCOP 56747 Prim-pol domain
2 2 2 0 SCOP 140931 Fic-like
2 2 2 0 SCOP 53062 PTS system fructose IIA component-like
2 2 1 0 SCOP 50486 FMT C-terminal domain-like
2 2 1 0 SCOP 101738 SspB-like
2 2 1 0 SCOP 50331 MOP-like
2 2 2 0 SCOP 82704 AlbA-like
2 2 1 1 SCOP 50346 PRC-barrel domain
2 2 2 1 SCOP 111321 AF1104-like
2 2 1 0 SCOP 160350 Rnp2-like
2 2 1 0 SCOP 69819 MTH1598-like
2 2 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
2 2 1 0 SCOP 52794 PTS system IIB component-like
2 2 1 0 SCOP 63520 PTS-regulatory domain, PRD
2 1 1 0 SCOP 54403 Cystatin/monellin
2 2 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
2 2 1 1 SCOP 142921 WGR domain-like
2 2 1 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
2 2 1 0 SCOP 158745 LanC-like
2 1 1 0 SCOP 116726 TrkA C-terminal domain-like
2 2 2 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
2 2 1 1 SCOP 50621 Alanine racemase C-terminal domain-like
2 2 1 1 SCOP 110111 Ctag/Cox11
2 2 1 0 SCOP 110019 ERO1-like
2 1 1 0 SCOP 51120 beta-Roll
2 1 1 0 SCOP 54810 GMP synthetase C-terminal dimerisation domain
2 2 2 1 SCOP 101887 Apyrase
2 2 1 0 SCOP 47933 ERP29 C domain-like
2 2 1 0 SCOP 140490 Nqo1C-terminal domain-like
2 2 2 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
2 2 2 0 SCOP 69203 Nucleoplasmin-like core domain
2 2 1 0 SCOP 56994 Insulin-like
2 2 2 1 SCOP 50353 Cytokine
2 2 1 1 SCOP 89817 Mago nashi protein
2 2 2 0 SCOP 56854 Bcl-2 inhibitors of programmed cell death
2 2 1 0 SCOP 118359 Expressed protein At2g23090/F21P24.15
2 2 1 0 SCOP 82671 SEA domain
2 2 2 0 SCOP 52025 PA domain
2 2 2 0 SCOP 63451 LEM domain
2 2 1 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
2 2 1 0 SCOP 140856 USP8 N-terminal domain-like
2 2 1 0 SCOP 57095 Scorpion toxin-like
2 2 2 0 SCOP 82927 Cysteine-rich DNA binding domain, (DM domain)
2 2 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
2 2 1 0 SCOP 144292 occludin/ELL-like
2 2 1 1 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
2 2 1 0 SCOP 140427 VPS28 C-terminal domain-like
2 2 2 1 SCOP 81872 BRCA2 helical domain
2 2 2 1 SCOP 110217 DNA-binding protein LAG-1 (CSL)
2 2 2 0 SCOP 143503 PUG domain-like
2 2 1 0 SCOP 143575 GAS2 domain-like
2 2 1 0 SCOP 63877 Methuselah ectodomain
2 2 1 0 SCOP 55277 GYF domain
2 2 2 1 SCOP 81327 Small-conductance potassium channel
2 2 1 1 SCOP 160897 Taf5 N-terminal domain-like
2 2 1 0 SCOP 144270 Eferin C-derminal domain-like
2 2 1 0 SCOP 140586 Dcp2 domain-like
2 2 1 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
2 2 2 0 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
2 2 2 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
2 2 2 0 SCOP 81502 ISP transmembrane anchor
2 2 1 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
2 2 2 0 SCOP 111479 Fzo-like conserved region
2 2 2 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
2 2 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
2 2 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
2 2 2 1 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
2 2 1 0 SCOP 161256 RILP dimerisation region
2 2 2 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
2 2 1 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
2 2 1 0 SCOP 109805 Phenylalanine zipper
2 2 1 1 SCOP 109880 A middle domain of Talin 1
2 2 2 1 SCOP 158548 FLJ32549 domain-like
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 55282 RL5-like
1 1 1 0 SCOP 46946 S13-like H2TH domain
1 1 1 0 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 143034 L35p-like
1 1 1 0 SCOP 74731 Ribosomal protein L20
1 1 1 0 SCOP 143800 L28p-like
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 0 SCOP 55821 YrdC/RibB
1 1 1 0 SCOP 51261 Duplicated hybrid motif
1 1 1 0 SCOP 48150 DNA-glycosylase
1 1 1 0 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 0 SCOP 55387 Frataxin/Nqo15-like
1 1 1 0 SCOP 48140 Ribosomal protein L19 (L19e)
1 1 1 0 SCOP 144217 CSL zinc finger
1 1 1 0 SCOP 52042 Ribosomal protein L32e
1 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
1 1 1 0 SCOP 54575 Ribosomal protein L31e
1 1 1 0 SCOP 81406 Mitochondrial cytochrome c oxidase subunit IV
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 55144 LigT-like
1 1 1 1 SCOP 55248 PCD-like
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 1 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
1 1 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 1 SCOP 49329 Cu,Zn superoxide dismutase-like
1 1 1 0 SCOP 110849 ParB/Sulfiredoxin
1 1 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
1 1 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
1 1 1 0 SCOP 81427 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 1 SCOP 55770 Profilin (actin-binding protein)
1 1 1 0 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 1 SCOP 46988 Tubulin chaperone cofactor A
1 1 1 1 SCOP 69618 HemD-like
1 1 1 1 SCOP 63562 RPB6/omega subunit-like
1 1 1 0 SCOP 46458 Globin-like
1 1 1 1 SCOP 101546 ASF1-like
1 1 1 0 SCOP 52172 CheY-like
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 1 SCOP 56601 beta-lactamase/transpeptidase-like
1 1 1 1 SCOP 56266 DmpA/ArgJ-like
1 1 1 0 SCOP 82697 PurS-like
1 1 1 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
1 1 1 0 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
1 1 1 0 SCOP 54447 ssDNA-binding transcriptional regulator domain
1 1 1 0 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 110399 ThiG-like
1 1 1 1 SCOP 103365 Hypothetical protein PH1602
1 1 1 0 SCOP 116734 DNA methylase specificity domain
1 1 1 1 SCOP 50993 Peptidase/esterase 'gauge' domain
1 1 1 0 SCOP 143081 BB1717-like
1 1 1 0 SCOP 54975 Acylphosphatase/BLUF domain-like
1 1 1 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
1 1 1 1 SCOP 89392 Prokaryotic lipoproteins and lipoprotein localization factors
1 1 1 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
1 1 1 0 SCOP 110069 ApaG-like
1 1 1 0 SCOP 101386 all-alpha NTP pyrophosphatases
1 1 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 0 SCOP 69786 YggU-like
1 1 1 1 SCOP 75005 Arabinanase/levansucrase/invertase
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 0 SCOP 160374 RplX-like
1 1 1 1 SCOP 69695 SRP19
1 1 1 0 SCOP 63867 MoeA C-terminal domain-like
1 1 1 1 SCOP 55895 Ribonuclease Rh-like
1 1 1 0 SCOP 143865 CorA soluble domain-like
1 1 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
1 1 1 0 SCOP 50960 TolB, C-terminal domain
1 1 1 1 SCOP 56512 Nitric oxide (NO) synthase oxygenase domain
1 1 1 0 SCOP 52728 PTS IIb component
1 1 1 1 SCOP 144064 Heme iron utilization protein-like
1 1 1 1 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 141255 YccV-like
1 1 1 0 SCOP 58026 Delta-sleep-inducing peptide immunoreactive peptide
1 1 1 0 SCOP 81573 F1F0 ATP synthase subunit B, membrane domain
1 1 1 0 SCOP 49468 VHL
1 1 1 1 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 1 SCOP 103359 Suppressor of Fused, N-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 57884 Ada DNA repair protein, N-terminal domain (N-Ada 10)
1 1 1 0 SCOP 49363 Purple acid phosphatase, N-terminal domain
1 1 1 0 SCOP 53623 MurD-like peptide ligases, catalytic domain
1 1 1 1 SCOP 53920 Fe-only hydrogenase
1 1 1 0 SCOP 143548 Serine metabolism enzymes domain
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
1 1 1 0 SCOP 110836 Hypothetical protein SAV1430
1 1 1 1 SCOP 63882 MoeA N-terminal region -like
1 1 1 0 SCOP 56973 Aerolisin/ETX pore-forming domain
1 1 1 0 SCOP 47857 Apolipophorin-III
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
1 1 1 0 SCOP 54991 Anticodon-binding domain of PheRS
1 1 1 0 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 0 SCOP 81790 Myosin phosphatase inhibitor 17kDa protein, CPI-17
1 1 1 0 SCOP 81518 Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 69000 FAD-dependent thiol oxidase
1 1 1 1 SCOP 47798 Barrier-to-autointegration factor, BAF
1 1 1 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
1 1 1 0 SCOP 140984 PTPA-like
1 1 1 1 SCOP 158639 ENT-like
1 1 1 0 SCOP 110004 Glycolipid transfer protein, GLTP
1 1 1 0 SCOP 82051 Obg GTP-binding protein N-terminal domain
1 1 1 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
1 1 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
1 1 1 0 SCOP 143724 PHP14-like
1 1 1 0 SCOP 111006 Dystroglycan, domain 2
1 1 1 1 SCOP 161065 ATP synthase D chain-like
1 1 1 1 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 140106 Calcyclin-binding protein-like
1 1 1 1 SCOP 140864 TROVE domain-like
1 1 1 1 SCOP 47216 Proteasome activator
1 1 1 1 SCOP 143875 ERH-like
1 1 1 1 SCOP 48479 Cytochrome c oxidase subunit E
1 1 1 1 SCOP 54529 Mitochondrial glycoprotein MAM33-like
1 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 0 SCOP 161060 ATP synthase B chain-like
1 1 1 0 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 0 SCOP 103243 KA1-like
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 0 SCOP 160527 V-type ATPase subunit E-like
1 1 1 1 SCOP 47157 Mitochondrial import receptor subunit Tom20
1 1 1 0 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
1 1 1 1 SCOP 101391 Hsp90 co-chaperone CDC37
1 1 1 1 SCOP 90073 GCM domain
1 1 1 0 SCOP 69099 Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
1 1 1 0 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
1 1 1 1 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
1 1 1 0 SCOP 102860 mRNA decapping enzyme DcpS N-terminal domain
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 160651 FLJ32549 C-terminal domain-like
1 1 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 69036 Bcr-Abl oncoprotein oligomerization domain
1 1 1 1 SCOP 160088 NRDP1 C-terminal domain-like
1 1 1 0 SCOP 109732 HBS1-like domain
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 101238 XPC-binding domain
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 81878 BRCA2 tower domain
1 1 1 0 SCOP 69125 Nuclear receptor coactivator interlocking domain
1 1 1 0 SCOP 111469 Geminin coiled-coil domain

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Dimerization motif of sir4
SCOP superfamily Somatomedin B domain
SCOP superfamily Hypothetical protein VC0424
SCOP superfamily Proguanylin
SCOP superfamily PHP domain-like
SCOP superfamily AbrB/MazE/MraZ-like
SCOP superfamily Collagen-binding domain
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily Group I dsDNA viruses
SCOP superfamily Nuclease A inhibitor (NuiA)
SCOP superfamily X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain
SCOP superfamily PsbU/PolX domain-like
SCOP superfamily Photosystem II reaction centre subunit H, transmembrane region
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIc
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Siroheme synthase middle domains-like
SCOP superfamily Rotavirus NSP2 fragment, N-terminal domain
SCOP superfamily VSV matrix protein
SCOP superfamily Rotavirus NSP2 fragment, C-terminal domain
SCOP superfamily Major surface antigen p30, SAG1
SCOP superfamily Aconitase B, N-terminal domain
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily Ribosome binding protein Y (YfiA homologue)
SCOP superfamily Glutamyl tRNA-reductase catalytic, N-terminal domain
SCOP superfamily DsrC, the gamma subunit of dissimilatory sulfite reductase
SCOP superfamily Transcription factor NusA, N-terminal domain
SCOP superfamily DTD-like
SCOP superfamily Cloacin translocation domain
SCOP superfamily Cell wall binding repeat
SCOP superfamily Phage fibre proteins
SCOP superfamily Protein-L-isoaspartyl O-methyltransferase, C-terminal domain
SCOP superfamily Recombination endonuclease VII, C-terminal and dimerization domains
SCOP superfamily Phase 1 flagellin
SCOP superfamily SurE-like
SCOP superfamily Sortase
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Oligomerization domain of hepatitis delta antigen
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Virus ectodomain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Fibritin
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Rotavirus nonstructural proteins
SCOP superfamily XRCC4, C-terminal oligomerization domain
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Assembly domain of cartilage oligomeric matrix protein
SCOP superfamily Zn-binding domains of ADDBP
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily HIPIP (high potential iron protein)
SCOP superfamily HIV-1 VPU cytoplasmic domain
SCOP superfamily TNF receptor-like
SCOP superfamily Midkine
SCOP superfamily omega toxin-like
SCOP superfamily Plant lectins/antimicrobial peptides
SCOP superfamily Perfringolysin
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily Exotoxin A, middle domain
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Colicin
SCOP superfamily Reovirus inner layer core protein p3
SCOP superfamily DNA primase core
SCOP superfamily Replication terminator protein (Tus)
SCOP superfamily Conserved core of transcriptional regulatory protein vp16
SCOP superfamily Penicillin binding protein dimerisation domain
SCOP superfamily gp120 core
SCOP superfamily ADC synthase
SCOP superfamily Nitrite and sulphite reductase 4Fe-4S domain-like
SCOP superfamily Homing endonucleases
SCOP superfamily GAD domain-like
SCOP superfamily Cyanase C-terminal domain
SCOP superfamily Ribosome recycling factor, RRF
SCOP superfamily Formylmethanofuran:tetrahydromethanopterin formyltransferase
SCOP superfamily Methyl-coenzyme M reductase subunits
SCOP superfamily Ribosomal protein S6
SCOP superfamily Viral DNA-binding domain
SCOP superfamily GlnB-like
SCOP superfamily Pili subunits
SCOP superfamily Superantigen toxins, C-terminal domain
SCOP superfamily Interleukin 8-like chemokines
SCOP superfamily RNase A-like
SCOP superfamily "Helical backbone" metal receptor
SCOP superfamily Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
SCOP superfamily LigB-like
SCOP superfamily Type II 3-dehydroquinate dehydratase
SCOP superfamily MurCD N-terminal domain
SCOP superfamily Cobalamin (vitamin B12)-dependent enzymes
SCOP superfamily Tlp20, baculovirus telokin-like protein
SCOP superfamily alpha-D-mannose-specific plant lectins
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily Outer surface protein
SCOP superfamily Carbohydrate binding domain
SCOP superfamily Thermostable phytase (3-phytase)
SCOP superfamily Soluble quinoprotein glucose dehydrogenase
SCOP superfamily Sialidases
SCOP superfamily beta-Barrel protease inhibitors
SCOP superfamily Bacterial enterotoxins
SCOP superfamily SacY-like RNA-binding domain
SCOP superfamily C-terminal domain of transcriptional repressors
SCOP superfamily EV matrix protein
SCOP superfamily Baculovirus p35 protein
SCOP superfamily Virus attachment protein globular domain
SCOP superfamily Periplasmic chaperone C-domain
SCOP superfamily Transthyretin (synonym: prealbumin)
SCOP superfamily Cytochrome f, large domain
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily Multiheme cytochromes
SCOP superfamily Serum albumin-like
SCOP superfamily Tetracyclin repressor-like, C-terminal domain
SCOP superfamily gene 59 helicase assembly protein
SCOP superfamily Bacterial muramidases
SCOP superfamily A virus capsid protein alpha-helical domain
SCOP superfamily Aldehyde ferredoxin oxidoreductase, C-terminal domains
SCOP superfamily Chondroitin AC/alginate lyase
SCOP superfamily An anticodon-binding domain of class I aminoacyl-tRNA synthetases
SCOP superfamily GntR ligand-binding domain-like
SCOP superfamily Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
SCOP superfamily Retroviral matrix proteins
SCOP superfamily Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
SCOP superfamily Chemotaxis receptor methyltransferase CheR, N-terminal domain
SCOP superfamily N-terminal domain of cbl (N-cbl)
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Apolipoprotein
SCOP superfamily HSC20 (HSCB), C-terminal oligomerisation domain
SCOP superfamily Ribosomal protein S20
SCOP superfamily C-terminal effector domain of the bipartite response regulators
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily tRNA-binding arm
SCOP superfamily GreA transcript cleavage protein, N-terminal domain
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily YfgJ-like
SCOP superfamily Photosystem II antenna protein-like
SCOP superfamily Cytochrome b559 subunits
SCOP superfamily Photosystem II reaction center protein M, PsbM
SCOP superfamily Photosystem II 10 kDa phosphoprotein PsbH
SCOP superfamily SSO1389-like
SCOP superfamily AF1531-like
SCOP superfamily MalF N-terminal region-like
SCOP superfamily Rv2827c C-terminal domain-like
SCOP superfamily YqaI-like
SCOP superfamily YehR-like
SCOP superfamily MbtH-like
SCOP superfamily NMB0513-like
SCOP superfamily BLRF2-like
SCOP superfamily YdfO-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily AMPKBI-like
SCOP superfamily NMB0488-like
SCOP superfamily MM3350-like
SCOP superfamily YerB-like
SCOP superfamily Cgl1923-like
SCOP superfamily YkvR-like
SCOP superfamily HIN-2000 domain-like
SCOP superfamily BC4932-like
SCOP superfamily YopX-like
SCOP superfamily WSSV envelope protein-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily Bacillus cereus metalloprotein-like
SCOP superfamily HP0062-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily Heterotrimerisation domain of extracellular hemoglobin linker subunits
SCOP superfamily MPN010-like
SCOP superfamily Vanabin-like
SCOP superfamily ORC1-binding domain
SCOP superfamily GK1464-like
SCOP superfamily MK0786-like
SCOP superfamily TM1622-like
SCOP superfamily TTP0101/SSO1404-like
SCOP superfamily Ns1 effector domain-like
SCOP superfamily YktB/PF0168-like
SCOP superfamily CAC2185-like
SCOP superfamily AF0625-like
SCOP superfamily CofD-like
SCOP superfamily Kinase-associated protein B-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily GUN4-like
SCOP superfamily Pseudo ankyrin repeat-like
SCOP superfamily YidB-like
SCOP superfamily YozE-like
SCOP superfamily TM0693-like
SCOP superfamily FHV B2 protein-like
SCOP superfamily HP1531-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily Rabenosyn-5 Rab-binding domain-like
SCOP superfamily Synuclein
SCOP superfamily Viral ssDNA binding protein
SCOP superfamily YbjQ-like
SCOP superfamily TM1631-like
SCOP superfamily Hypothetical protein PA1324
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily EspA/CesA-like
SCOP superfamily YugE-like
SCOP superfamily XseB-like
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily OmpH-like
SCOP superfamily VP4 membrane interaction domain
SCOP superfamily HlyD-like secretion proteins
SCOP superfamily Tsx-like channel
SCOP superfamily Recombination protein RecR
SCOP superfamily Bacillus phage protein
SCOP superfamily Hypothetical protein yfbM
SCOP superfamily 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
SCOP superfamily Toprim domain
SCOP superfamily Her-1
SCOP superfamily Hypothetical protein MG354
SCOP superfamily Triger factor/SurA peptide-binding domain-like
SCOP superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
SCOP superfamily Hypothetical protein At3g22680
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily Domain from hypothetical 2610208m17rik protein
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily PhoU-like
SCOP superfamily Alpha-hemoglobin stabilizing protein AHSP
SCOP superfamily KRAB domain (Kruppel-associated box)
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily G protein-binding domain
SCOP superfamily Sec-C motif
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
SCOP superfamily Virulence-associated V antigen
SCOP superfamily Sensory domain-like
SCOP superfamily Ta1353-like
SCOP superfamily OmpA-like
SCOP superfamily Hypothetical protein YwqG
SCOP superfamily Cell division protein ZapA-like
SCOP superfamily Obg GTP-binding protein C-terminal domain
SCOP superfamily (2r)-phospho-3-sulfolactate synthase ComA
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily Hypothetical protein YgiW
SCOP superfamily Smp-1-like
SCOP superfamily Eukaryotic initiation factor 4f subunit eIF4g, eIF4e-binding domain
SCOP superfamily Superantigen MAM
SCOP superfamily YutG-like
SCOP superfamily GRIP domain
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like
SCOP superfamily Plant invertase/pectin methylesterase inhibitor
SCOP superfamily Typo IV secretion system protein TraC

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.