SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > Genomes > Superfamily assignments for Ciona savignyi 76_2.0


Ciona savignyi 76_2.0 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona savignyi

Downloads
Fasta format sequences
Domain assignments

Jump to [ Top of page · Domain assignments ]

Assignment statistics

Sequences: 20155 total
13419 (67 %) with assignment
481 average length
53 % amino acid coverage
Domains: 30631 total
912 unique superfamilies
858 unique families
383 average length
33.6 average superfamily size
97 % formed by duplication
Domain combinations: 1126 domain pairs
3872 unique architectures

Jump to [ Top of page · Assignment statistics ]

Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
1881 1247 209 12 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
1671 332 261 0 SCOP 57196 EGF/Laminin
1494 215 68 0 SCOP 57667 beta-beta-alpha zinc fingers
820 276 201 1 SCOP 57184 Growth factor receptor domain
781 156 91 1 SCOP 48726 Immunoglobulin
771 174 100 1 SCOP 49265 Fibronectin type III
702 114 74 0 SCOP 57535 Complement control module/SCR domain
701 690 144 3 SCOP 56112 Protein kinase-like (PK-like)
520 410 80 16 SCOP 48371 ARM repeat
454 80 56 0 SCOP 57424 LDL receptor-like module
408 366 67 1 SCOP 50978 WD40 repeat-like
407 115 69 0 SCOP 82895 TSP-1 type 1 repeat
384 342 140 10 SCOP 50729 PH domain-like
372 32 24 0 SCOP 49313 Cadherin-like
359 169 70 2 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
333 108 47 8 SCOP 81296 E set domains
329 209 46 1 SCOP 54928 RNA-binding domain, RBD
324 129 34 0 SCOP 81324 Voltage-gated potassium channels
321 304 11 1 SCOP 103473 MFS general substrate transporter
271 247 69 5 SCOP 47473 EF-hand
270 175 44 2 SCOP 48452 TPR-like
225 190 66 1 SCOP 50044 SH3-domain
218 170 74 1 SCOP 48403 Ankyrin repeat
218 92 46 1 SCOP 50156 PDZ domain-like
213 113 11 0 SCOP 90123 ABC transporter transmembrane region
210 205 39 9 SCOP 51735 NAD(P)-binding Rossmann-fold domains
203 66 40 0 SCOP 49854 Spermadhesin, CUB domain
201 177 65 3 SCOP 57850 RING/U-box
200 139 53 4 SCOP 54236 Ubiquitin-like
198 151 62 5 SCOP 49899 Concanavalin A-like lectins/glucanases
198 187 4 1 SCOP 161070 SNF-like
186 100 15 5 SCOP 53067 Actin-like ATPase domain
184 171 61 3 SCOP 53300 vWA-like
180 28 20 1 SCOP 46966 Spectrin repeat
178 50 20 1 SCOP 90257 Myosin rod fragments
172 172 3 1 SCOP 48264 Cytochrome P450
168 155 40 9 SCOP 46785 "Winged helix" DNA-binding domain
161 154 38 7 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
161 107 36 3 SCOP 52058 L domain-like
157 113 34 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
156 105 21 5 SCOP 52833 Thioredoxin-like
154 132 27 4 SCOP 46689 Homeodomain-like
153 129 35 9 SCOP 51445 (Trans)glycosidases
149 146 17 1 SCOP 81321 Family A G protein-coupled receptor-like
146 117 33 4 SCOP 51905 FAD/NAD(P)-binding domain
142 142 9 13 SCOP 53474 alpha/beta-Hydrolases
139 135 28 9 SCOP 56784 HAD-like
138 138 35 8 SCOP 54001 Cysteine proteinases
136 79 31 1 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
117 110 9 6 SCOP 53383 PLP-dependent transferases
117 45 27 0 SCOP 57603 FnI-like domain
116 35 13 2 SCOP 55753 Actin depolymerizing proteins
115 110 11 13 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
115 84 35 1 SCOP 57903 FYVE/PHD zinc finger
112 107 11 8 SCOP 53448 Nucleotide-diphospho-sugar transferases
112 106 10 1 SCOP 56496 Fibrinogen C-terminal domain-like
110 101 24 5 SCOP 53098 Ribonuclease H-like
107 94 34 1 SCOP 55550 SH2 domain
105 101 48 7 SCOP 49785 Galactose-binding domain-like
104 98 36 2 SCOP 50494 Trypsin-like serine proteases
100 74 28 0 SCOP 47769 SAM/Pointed domain
99 69 21 3 SCOP 56436 C-type lectin-like
98 98 19 3 SCOP 51197 Clavaminate synthase-like
98 96 31 2 SCOP 54695 POZ domain
97 93 5 1 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
96 78 28 5 SCOP 50249 Nucleic acid-binding proteins
96 66 32 0 SCOP 57889 Cysteine-rich domain
91 37 30 1 SCOP 63825 YWTD domain
91 88 22 1 SCOP 81665 Calcium ATPase, transmembrane domain M
91 34 17 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
91 87 13 0 SCOP 100895 Kazal-type serine protease inhibitors
85 70 21 1 SCOP 117281 Kelch motif
84 80 25 3 SCOP 52374 Nucleotidylyl transferase
83 83 33 6 SCOP 54211 Ribosomal protein S5 domain 2-like
83 83 18 1 SCOP 81653 Calcium ATPase, transduction domain A
80 79 14 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
75 42 18 1 SCOP 51206 cAMP-binding domain-like
74 41 30 0 SCOP 51045 WW domain
72 70 20 3 SCOP 103657 BAR/IMD domain-like
71 26 10 2 SCOP 49503 Cupredoxins
71 36 11 1 SCOP 54980 EF-G C-terminal domain-like
69 68 27 2 SCOP 50447 Translation proteins
68 68 25 2 SCOP 48350 GTPase activation domain, GAP
67 61 8 1 SCOP 56801 Acetyl-CoA synthetase-like
67 57 25 1 SCOP 47031 Second domain of FERM
65 40 14 0 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
65 14 7 1 SCOP 50911 Mannose 6-phosphate receptor domain
65 30 20 0 SCOP 57567 Serine protease inhibitors
64 10 10 0 SCOP 57581 TB module/8-cys domain
63 46 12 1 SCOP 55073 Nucleotide cyclase
63 58 19 1 SCOP 51011 Glycosyl hydrolase domain
62 62 7 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
62 25 7 1 SCOP 141072 CalX-like
60 59 19 2 SCOP 49879 SMAD/FHA domain
59 43 19 1 SCOP 47370 Bromodomain
58 52 5 2 SCOP 53649 Alkaline phosphatase-like
56 56 18 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
55 55 22 2 SCOP 55681 Class II aaRS and biotin synthetases
55 52 7 3 SCOP 48208 Six-hairpin glycosidases
55 16 3 1 SCOP 53738 Phosphoglucomutase, first 3 domains
52 30 6 4 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
52 37 10 3 SCOP 52096 ClpP/crotonase
52 51 12 5 SCOP 53187 Zn-dependent exopeptidases
52 11 10 0 SCOP 55008 HMA, heavy metal-associated domain
51 51 27 1 SCOP 47576 Calponin-homology domain, CH-domain
51 51 16 5 SCOP 49417 p53-like transcription factors
50 50 16 2 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
49 44 14 1 SCOP 57997 Tropomyosin
49 34 9 2 SCOP 52777 CoA-dependent acyltransferases
49 49 10 1 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
49 49 30 1 SCOP 48065 DBL homology domain (DH-domain)
49 39 21 2 SCOP 63748 Tudor/PWWP/MBT
48 48 11 1 SCOP 48113 Heme-dependent peroxidases
48 48 15 2 SCOP 63380 Riboflavin synthase domain-like
47 46 5 1 SCOP 52490 Tubulin nucleotide-binding domain-like
46 46 9 3 SCOP 56300 Metallo-dependent phosphatases
46 40 13 2 SCOP 74650 Galactose mutarotase-like
46 46 24 1 SCOP 46565 Chaperone J-domain
46 12 9 0 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
46 35 14 0 SCOP 69179 Integrin domains
45 45 5 1 SCOP 103506 Mitochondrial carrier
45 39 11 1 SCOP 48097 Regulator of G-protein signaling, RGS
44 39 5 2 SCOP 47113 Histone-fold
44 43 4 1 SCOP 55307 Tubulin C-terminal domain-like
44 27 12 3 SCOP 47954 Cyclin-like
44 44 21 1 SCOP 56204 Hect, E3 ligase catalytic domain
43 42 12 1 SCOP 51230 Single hybrid motif
43 19 15 0 SCOP 52113 BRCT domain
42 40 11 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
42 24 4 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
42 32 13 1 SCOP 54160 Chromo domain-like
42 23 8 1 SCOP 57924 Inhibitor of apoptosis (IAP) repeat
40 36 17 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
40 15 5 1 SCOP 63411 LuxS/MPP-like metallohydrolase
40 40 10 1 SCOP 47616 GST C-terminal domain-like
40 38 5 0 SCOP 63712 Nicotinic receptor ligand binding domain-like
39 39 12 0 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
39 39 4 1 SCOP 90112 Neurotransmitter-gated ion-channel transmembrane pore
37 37 4 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
36 36 10 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
36 34 13 3 SCOP 52047 RNI-like
36 36 18 1 SCOP 64268 PX domain
36 32 14 0 SCOP 57492 Trefoil
36 19 8 1 SCOP 82109 MIR domain
35 33 4 1 SCOP 53720 ALDH-like
35 35 7 2 SCOP 54495 UBC-like
35 35 9 3 SCOP 56672 DNA/RNA polymerases
35 33 20 0 SCOP 46934 UBA-like
34 34 6 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
34 33 15 3 SCOP 54373 FAD-linked reductases, C-terminal domain
34 34 5 1 SCOP 63501 Frizzled cysteine-rich domain
33 33 10 2 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
33 27 9 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
33 24 8 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
33 33 6 1 SCOP 74788 Cullin repeat-like
33 21 14 0 SCOP 57756 Retrovirus zinc finger-like domains
32 22 9 2 SCOP 53850 Periplasmic binding protein-like II
32 9 8 1 SCOP 47220 alpha-catenin/vinculin-like
31 20 9 1 SCOP 54534 FKBP-like
31 28 7 2 SCOP 55931 Glutamine synthetase/guanido kinase
31 31 10 1 SCOP 82199 SET domain
31 31 6 1 SCOP 56176 FAD-binding/transporter-associated domain-like
31 22 14 1 SCOP 54768 dsRNA-binding domain-like
31 31 17 0 SCOP 57302 Snake toxin-like
31 19 13 0 SCOP 90229 CCCH zinc finger
30 24 6 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
30 30 9 3 SCOP 52440 PreATP-grasp domain
30 23 12 2 SCOP 49599 TRAF domain-like
30 30 7 0 SCOP 75553 Smc hinge domain
29 29 6 1 SCOP 54292 2Fe-2S ferredoxin-like
29 29 9 1 SCOP 50891 Cyclophilin-like
29 10 8 1 SCOP 103647 TSP type-3 repeat
29 16 14 0 SCOP 57440 Kringle-like
28 28 11 5 SCOP 51556 Metallo-dependent hydrolases
28 28 9 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
27 25 11 2 SCOP 51695 PLC-like phosphodiesterases
27 25 7 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
27 27 8 2 SCOP 56219 DNase I-like
27 27 7 1 SCOP 51246 Rudiment single hybrid motif
27 9 1 1 SCOP 55973 S-adenosylmethionine synthetase
27 27 6 3 SCOP 49348 Clathrin adaptor appendage domain
27 27 9 1 SCOP 48508 Nuclear receptor ligand-binding domain
26 22 9 1 SCOP 47095 HMG-box
26 23 11 1 SCOP 54631 CBS-domain pair
26 15 9 0 SCOP 55785 PYP-like sensor domain (PAS domain)
26 26 12 1 SCOP 81383 F-box domain
25 16 8 0 SCOP 51126 Pectin lyase-like
25 24 8 2 SCOP 52151 FabD/lysophospholipase-like
25 24 3 1 SCOP 55804 Phoshotransferase/anion transport protein
25 14 6 1 SCOP 53901 Thiolase-like
25 18 5 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
25 24 9 0 SCOP 47986 DEATH domain
25 24 4 1 SCOP 75632 Cullin homology domain
25 9 4 1 SCOP 47762 PAH2 domain
25 10 10 0 SCOP 90193 Notch domain
24 24 6 2 SCOP 109604 HD-domain/PDEase-like
24 24 10 1 SCOP 56399 ADP-ribosylation
24 24 13 0 SCOP 52954 Class II aaRS ABD-related
24 24 7 4 SCOP 52467 DHS-like NAD/FAD-binding domain
24 24 4 1 SCOP 56003 Molybdenum cofactor-binding domain
24 15 8 1 SCOP 159034 Mib/herc2 domain-like
24 23 6 2 SCOP 52029 GroEL apical domain-like
24 24 4 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
24 24 5 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
23 22 14 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
23 22 11 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
23 23 8 1 SCOP 69318 Integrin alpha N-terminal domain
23 23 3 1 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
23 23 3 1 SCOP 47741 CO dehydrogenase ISP C-domain like
23 23 3 0 SCOP 48652 Tetraspanin
23 23 9 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
23 10 9 0 SCOP 56487 SRCR-like
22 22 11 1 SCOP 52218 Flavoproteins
22 21 12 1 SCOP 58038 SNARE fusion complex
22 22 7 1 SCOP 82171 DPP6 N-terminal domain-like
22 22 11 1 SCOP 57863 ArfGap/RecO-like zinc finger
22 22 3 1 SCOP 56366 SMAD MH1 domain
22 22 1 2 SCOP 57501 Cystine-knot cytokines
22 12 8 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
21 10 2 1 SCOP 53784 Phosphofructokinase
21 17 4 1 SCOP 50129 GroES-like
21 14 6 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
21 21 6 2 SCOP 55961 Bet v1-like
21 20 3 2 SCOP 48592 GroEL equatorial domain-like
21 21 9 3 SCOP 48464 ENTH/VHS domain
21 15 5 1 SCOP 109905 Surp module (SWAP domain)
20 17 5 2 SCOP 53271 PRTase-like
20 20 7 3 SCOP 53254 Phosphoglycerate mutase-like
20 20 6 1 SCOP 51395 FMN-linked oxidoreductases
20 20 11 2 SCOP 88697 PUA domain-like
20 20 6 1 SCOP 48366 Ras GEF
20 20 7 1 SCOP 50923 Hemopexin-like domain
20 20 8 1 SCOP 52087 CRAL/TRIO domain
20 20 6 0 SCOP 57959 Leucine zipper domain
20 8 6 1 SCOP 109885 I/LWEQ domain
20 9 6 0 SCOP 47862 Saposin
20 20 3 2 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
19 19 9 1 SCOP 55920 Creatinase/aminopeptidase
19 19 7 3 SCOP 56104 SAICAR synthase-like
19 19 7 4 SCOP 64356 SNARE-like
19 19 4 1 SCOP 52129 Caspase-like
19 19 7 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
19 11 8 0 SCOP 57625 Invertebrate chitin-binding proteins
19 19 5 1 SCOP 52025 PA domain
19 11 5 1 SCOP 64593 Intermediate filament protein, coiled coil region
19 19 2 0 SCOP 54849 GroEL-intermediate domain like
19 12 6 1 SCOP 75399 Plakin repeat
18 18 5 1 SCOP 52266 SGNH hydrolase
18 18 2 1 SCOP 111352 Ammonium transporter
18 17 13 0 SCOP 50242 TIMP-like
18 9 5 1 SCOP 56024 Phospholipase D/nuclease
18 18 7 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
18 18 6 0 SCOP 47090 PGBD-like
18 18 2 1 SCOP 47895 Transducin (alpha subunit), insertion domain
18 17 9 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
17 16 8 2 SCOP 52317 Class I glutamine amidotransferase-like
17 17 5 1 SCOP 50104 Translation proteins SH3-like domain
17 17 4 0 SCOP 50370 Ricin B-like lectins
17 17 11 0 SCOP 144232 HIT/MYND zinc finger-like
17 17 2 1 SCOP 117892 Band 7/SPFH domain
17 17 8 1 SCOP 140741 RUN domain-like
17 17 5 0 SCOP 103575 Plexin repeat
17 17 4 2 SCOP 103243 KA1-like
17 15 8 1 SCOP 49758 Calpain large subunit, middle domain (domain III)
16 16 10 2 SCOP 52821 Rhodanese/Cell cycle control phosphatase
16 16 2 1 SCOP 144000 Oxysterol-binding protein-like
16 16 2 0 SCOP 52091 SpoIIaa-like
16 16 7 1 SCOP 53822 Periplasmic binding protein-like I
16 16 7 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
16 11 7 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
16 16 3 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
16 16 8 0 SCOP 57845 B-box zinc-binding domain
15 15 4 2 SCOP 53613 Ribokinase-like
15 13 3 2 SCOP 53697 SIS domain
15 15 5 1 SCOP 55120 Pseudouridine synthase
15 14 5 4 SCOP 100950 NagB/RpiA/CoA transferase-like
15 13 6 1 SCOP 50985 RCC1/BLIP-II
15 15 6 2 SCOP 55315 L30e-like
15 14 5 0 SCOP 54897 Protease propeptides/inhibitors
15 8 4 1 SCOP 55781 GAF domain-like
15 15 7 1 SCOP 88713 Glycoside hydrolase/deacetylase
15 15 2 2 SCOP 52768 Arginase/deacetylase
15 8 4 2 SCOP 53218 Molybdenum cofactor biosynthesis proteins
15 10 8 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
15 15 8 0 SCOP 49464 Carboxypeptidase regulatory domain-like
15 15 5 0 SCOP 48056 Di-copper centre-containing domain
15 15 8 0 SCOP 48334 DNA repair protein MutS, domain III
15 10 9 0 SCOP 57610 Thyroglobulin type-1 domain
15 10 6 1 SCOP 158702 Sec63 N-terminal domain-like
15 15 10 1 SCOP 81837 BEACH domain
15 15 6 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
15 15 3 1 SCOP 47672 Transferrin receptor-like dimerisation domain
15 13 6 1 SCOP 143791 DUSP-like
14 14 2 3 SCOP 51569 Aldolase
14 14 4 1 SCOP 50715 Ribosomal protein L25-like
14 14 6 1 SCOP 49764 HSP20-like chaperones
14 14 4 2 SCOP 50182 Sm-like ribonucleoproteins
14 14 4 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
14 13 10 0 SCOP 57783 Zinc beta-ribbon
14 12 3 1 SCOP 118215 Proton glutamate symport protein
14 14 8 1 SCOP 55186 ThrRS/AlaRS common domain
14 14 7 1 SCOP 52743 Subtilisin-like
14 14 4 0 SCOP 46938 CRAL/TRIO N-terminal domain
14 14 4 1 SCOP 81271 TGS-like
14 14 6 1 SCOP 88688 Families 57/38 glycoside transferase middle domain
14 14 7 0 SCOP 110942 HSP90 C-terminal domain
14 12 4 1 SCOP 48034 Guanido kinase N-terminal domain
14 9 2 1 SCOP 82615 Polo-box domain
14 7 2 1 SCOP 100909 IP3 receptor type 1 binding core, domain 2
14 14 6 1 SCOP 81811 Helical domain of Sec23/24
13 13 3 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
13 13 5 1 SCOP 102114 Radical SAM enzymes
13 13 6 2 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
13 12 4 1 SCOP 52016 LeuD/IlvD-like
13 13 5 0 SCOP 81995 beta-sandwich domain of Sec23/24
13 13 1 1 SCOP 48445 14-3-3 protein
13 13 6 1 SCOP 63570 PABC (PABP) domain
12 8 6 0 SCOP 47060 S15/NS1 RNA-binding domain
12 12 6 2 SCOP 54862 4Fe-4S ferredoxins
12 12 5 1 SCOP 55811 Nudix
12 12 3 1 SCOP 56281 Metallo-hydrolase/oxidoreductase
12 12 5 1 SCOP 52949 Macro domain-like
12 12 6 1 SCOP 63829 Calcium-dependent phosphotriesterase
12 12 6 1 SCOP 88723 PIN domain-like
12 12 5 1 SCOP 55797 PR-1-like
12 12 4 1 SCOP 53732 Aconitase iron-sulfur domain
12 2 2 0 SCOP 82153 FAS1 domain
12 12 6 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
12 12 6 2 SCOP 51971 Nucleotide-binding domain
12 12 5 3 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
12 11 6 1 SCOP 111347 Rap/Ran-GAP
12 12 5 1 SCOP 48425 Sec7 domain
12 12 2 0 SCOP 57552 Blood coagulation inhibitor (disintegrin)
12 6 5 1 SCOP 81698 FF domain
12 12 4 0 SCOP 82919 Zn-finger domain of Sec23/24
11 10 6 3 SCOP 54197 HIT-like
11 11 4 2 SCOP 51419 PLP-binding barrel
11 11 4 1 SCOP 82282 Homocysteine S-methyltransferase
11 10 2 1 SCOP 51069 Carbonic anhydrase
11 8 5 2 SCOP 46955 Putative DNA-binding domain
11 10 9 3 SCOP 81301 Nucleotidyltransferase
11 11 7 1 SCOP 81340 Clc chloride channel
11 10 4 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
11 11 3 0 SCOP 52075 Outer arm dynein light chain 1
11 11 6 0 SCOP 54277 CAD & PB1 domains
11 11 5 1 SCOP 46774 ARID-like
11 11 7 1 SCOP 101690 PAZ domain
11 8 6 0 SCOP 101288 L27 domain
11 7 6 0 SCOP 90188 Somatomedin B domain
11 11 3 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
10 10 2 3 SCOP 51366 Ribulose-phoshate binding barrel
10 10 5 1 SCOP 53137 Translational machinery components
10 10 2 2 SCOP 47240 Ferritin-like
10 10 3 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
10 7 3 1 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
10 6 5 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
10 10 6 1 SCOP 103025 Folate-binding domain
10 10 4 2 SCOP 46548 alpha-helical ferredoxin
10 10 8 0 SCOP 52200 Toll/Interleukin receptor TIR domain
10 9 3 1 SCOP 56719 Type II DNA topoisomerase
10 10 4 1 SCOP 52210 Succinyl-CoA synthetase domains
10 9 7 0 SCOP 141673 MOSC N-terminal domain-like
10 5 1 1 SCOP 56053 Ribosomal protein L6
10 10 4 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
10 10 6 0 SCOP 47391 Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
10 6 6 1 SCOP 116846 MIT domain
10 10 3 1 SCOP 50989 Clathrin heavy-chain terminal domain
10 10 2 1 SCOP 68993 FAT domain of focal adhesion kinase
10 10 3 0 SCOP 103652 G protein-binding domain
9 9 4 1 SCOP 81606 PP2C-like
9 9 2 1 SCOP 51430 NAD(P)-linked oxidoreductase
9 9 4 0 SCOP 144091 Rhomboid-like
9 9 6 0 SCOP 161111 Cation efflux protein transmembrane domain-like
9 9 6 0 SCOP 69322 Tricorn protease domain 2
9 6 3 0 SCOP 47781 RuvA domain 2-like
9 9 4 2 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
9 9 4 1 SCOP 47661 t-snare proteins
9 8 2 0 SCOP 49842 TNF-like
9 5 5 0 SCOP 57362 BPTI-like
9 9 5 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
9 5 3 0 SCOP 49309 Transglutaminase, two C-terminal domains
9 9 5 0 SCOP 158235 SOCS box-like
8 8 2 1 SCOP 53167 Purine and uridine phosphorylases
8 8 3 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
8 8 7 0 SCOP 51161 Trimeric LpxA-like enzymes
8 8 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
8 8 4 5 SCOP 51182 RmlC-like cupins
8 8 3 1 SCOP 143113 NAP-like
8 8 2 1 SCOP 53795 PEP carboxykinase-like
8 8 6 2 SCOP 47413 lambda repressor-like DNA-binding domains
8 5 5 0 SCOP 81901 HCP-like
8 5 4 0 SCOP 69065 RNase III domain-like
8 6 4 0 SCOP 49452 Starch-binding domain-like
8 8 5 0 SCOP 53092 Creatinase/prolidase N-terminal domain
8 8 6 0 SCOP 101898 NHL repeat
8 8 5 0 SCOP 50965 Galactose oxidase, central domain
8 8 2 1 SCOP 68923 PEP carboxykinase N-terminal domain
8 8 2 1 SCOP 50621 Alanine racemase C-terminal domain-like
8 8 5 1 SCOP 56042 PurM C-terminal domain-like
8 5 3 0 SCOP 54810 GMP synthetase C-terminal dimerisation domain
8 7 6 1 SCOP 81631 PAP/OAS1 substrate-binding domain
8 8 1 1 SCOP 56327 LDH C-terminal domain-like
8 6 5 1 SCOP 49742 PHM/PNGase F
8 8 3 1 SCOP 47874 Annexin
8 8 4 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
8 5 3 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
8 8 3 0 SCOP 47050 VHP, Villin headpiece domain
8 8 1 1 SCOP 48678 Moesin tail domain
8 8 3 0 SCOP 53150 DNA repair protein MutS, domain II
7 7 2 1 SCOP 81338 Aquaporin-like
7 7 3 2 SCOP 53927 Cytidine deaminase-like
7 7 4 0 SCOP 47336 ACP-like
7 7 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
7 7 3 1 SCOP 51730 FAD-linked oxidoreductase
7 7 3 1 SCOP 48256 Citrate synthase
7 7 6 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
7 7 4 1 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
7 7 6 1 SCOP 50022 ISP domain
7 7 4 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
7 7 1 0 SCOP 55136 Probable bacterial effector-binding domain
7 7 4 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
7 7 3 1 SCOP 89124 Nop domain
7 3 3 0 SCOP 50199 Staphylococcal nuclease
7 7 3 0 SCOP 160481 BRK domain-like
7 7 4 1 SCOP 55326 PurM N-terminal domain-like
7 7 3 1 SCOP 63882 MoeA N-terminal region -like
7 7 2 1 SCOP 90250 Troponin coil-coiled subunits
7 5 4 1 SCOP 118310 AN1-like Zinc finger
7 5 5 1 SCOP 74924 Cap-Gly domain
7 7 5 0 SCOP 49410 Alpha-macroglobulin receptor domain
7 7 3 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
7 7 2 0 SCOP 116907 Hook domain
7 7 2 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
7 3 3 0 SCOP 57262 Leech antihemostatic proteins
7 6 3 1 SCOP 110217 DNA-binding protein LAG-1 (CSL)
6 5 2 1 SCOP 103491 Preprotein translocase SecY subunit
6 6 4 1 SCOP 53328 Formyltransferase
6 6 3 1 SCOP 50630 Acid proteases
6 6 4 0 SCOP 47027 Acyl-CoA binding protein
6 6 3 0 SCOP 51717 Dihydropteroate synthetase-like
6 6 3 1 SCOP 55718 SCP-like
6 6 4 0 SCOP 102712 JAB1/MPN domain
6 4 3 0 SCOP 54909 Dimeric alpha+beta barrel
6 6 2 1 SCOP 48484 Lipoxigenase
6 6 5 1 SCOP 55166 Hedgehog/DD-peptidase
6 6 1 1 SCOP 50814 Lipocalins
6 6 3 1 SCOP 56507 Methionine synthase activation domain-like
6 6 3 1 SCOP 56534 Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
6 6 2 1 SCOP 160920 PSTPO5379-like
6 6 2 1 SCOP 63867 MoeA C-terminal domain-like
6 3 1 0 SCOP 161093 MgtE membrane domain-like
6 6 3 1 SCOP 48225 Seven-hairpin glycosidases
6 6 5 0 SCOP 68906 SAP domain
6 4 2 1 SCOP 55945 TATA-box binding protein-like
6 6 4 0 SCOP 48092 Transcription factor STAT-4 N-domain
6 6 4 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
6 5 4 1 SCOP 89837 Doublecortin (DC)
6 6 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
6 6 1 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
6 6 3 0 SCOP 63451 LEM domain
6 6 2 1 SCOP 55666 Ribonuclease PH domain 2-like
6 6 2 0 SCOP 47912 Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
6 6 3 0 SCOP 46942 Elongation factor TFIIS domain 2
6 3 3 0 SCOP 103637 CCHHC domain
6 6 4 0 SCOP 47655 STAT
6 5 4 0 SCOP 69848 LCCL domain
6 6 5 0 SCOP 64586 C-terminal domain of ProRS
6 6 3 1 SCOP 47644 Methionine synthase domain
6 6 4 1 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
5 5 2 2 SCOP 52141 Uracil-DNA glycosylase-like
5 5 2 1 SCOP 75304 Amidase signature (AS) enzymes
5 5 1 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
5 5 4 1 SCOP 75217 alpha/beta knot
5 5 2 0 SCOP 52980 Restriction endonuclease-like
5 5 4 2 SCOP 48150 DNA-glycosylase
5 5 2 1 SCOP 56655 Carbohydrate phosphatase
5 5 3 0 SCOP 54060 His-Me finger endonucleases
5 3 3 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
5 5 2 1 SCOP 56815 Sec1/munc18-like (SM) proteins
5 5 4 2 SCOP 54427 NTF2-like
5 4 2 0 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
5 5 4 1 SCOP 55159 eIF1-like
5 5 3 0 SCOP 58113 Apolipoprotein A-I
5 5 1 0 SCOP 46458 Globin-like
5 5 4 0 SCOP 141571 Pentapeptide repeat-like
5 5 1 0 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
5 5 2 1 SCOP 50692 ADC-like
5 5 2 1 SCOP 54518 Tubby C-terminal domain-like
5 5 3 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
5 5 1 1 SCOP 56574 Serpins
5 5 3 1 SCOP 56512 Nitric oxide (NO) synthase oxygenase domain
5 5 1 1 SCOP 52922 TK C-terminal domain-like
5 5 1 1 SCOP 53920 Fe-only hydrogenase
5 5 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
5 5 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
5 5 2 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
5 5 2 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
5 5 5 0 SCOP 82708 R3H domain
5 5 2 1 SCOP 101152 Mob1/phocein
5 5 4 1 SCOP 50353 Cytokine
5 5 3 0 SCOP 101912 Sema domain
5 4 3 0 SCOP 117839 WWE domain
5 5 4 0 SCOP 47454 A DNA-binding domain in eukaryotic transcription factors
5 3 3 0 SCOP 57277 Granulin repeat
5 5 3 1 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
5 5 1 0 SCOP 89000 post-HMGL domain-like
5 5 2 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
5 3 2 1 SCOP 140383 BSD domain-like
5 5 2 1 SCOP 54585 Cdc48 domain 2-like
5 5 2 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
5 5 2 0 SCOP 90234 Zinc finger domain of DNA polymerase-alpha
4 4 2 0 SCOP 57829 Zn-binding ribosomal proteins
4 4 3 0 SCOP 56808 Ribosomal protein L1
4 4 2 1 SCOP 47973 Ribosomal protein S7
4 4 2 1 SCOP 52166 Ribosomal protein L4
4 4 2 0 SCOP 55174 Alpha-L RNA-binding motif
4 4 2 0 SCOP 160369 Ribosomal protein L10-like
4 3 2 2 SCOP 48557 L-aspartase-like
4 4 3 1 SCOP 52313 Ribosomal protein S2
4 4 2 0 SCOP 101908 Putative isomerase YbhE
4 4 2 1 SCOP 48576 Terpenoid synthases
4 4 2 0 SCOP 55129 Ribosomal protein L30p/L7e
4 4 1 1 SCOP 56634 Heme-dependent catalase-like
4 4 2 2 SCOP 46626 Cytochrome c
4 4 2 1 SCOP 48439 Protein prenylyltransferase
4 4 2 1 SCOP 49329 Cu,Zn superoxide dismutase-like
4 4 1 0 SCOP 103486 V-type ATP synthase subunit C
4 4 1 1 SCOP 161084 MAPEG domain-like
4 4 1 1 SCOP 51998 PFL-like glycyl radical enzymes
4 4 1 1 SCOP 56349 DNA breaking-rejoining enzymes
4 4 2 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
4 4 3 0 SCOP 47592 SWIB/MDM2 domain
4 4 1 0 SCOP 160374 RplX-like
4 3 2 0 SCOP 55979 DNA clamp
4 4 2 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
4 4 2 0 SCOP 141255 YccV-like
4 2 2 1 SCOP 50405 Actin-crosslinking proteins
4 4 2 1 SCOP 48019 post-AAA+ oligomerization domain-like
4 4 3 1 SCOP 140990 FtsH protease domain-like
4 4 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
4 4 2 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
4 2 1 1 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
4 4 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
4 4 1 0 SCOP 46596 Eukaryotic DNA topoisomerase I, dispensable insert domain
4 3 3 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
4 4 4 1 SCOP 109993 VPS9 domain
4 4 2 1 SCOP 110004 Glycolipid transfer protein, GLTP
4 4 2 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
4 4 2 0 SCOP 140864 TROVE domain-like
4 4 2 1 SCOP 47216 Proteasome activator
4 4 2 0 SCOP 140856 USP8 N-terminal domain-like
4 3 2 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
4 4 4 0 SCOP 54511 GFP-like
4 4 2 1 SCOP 143885 RGC domain-like
4 4 2 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
4 4 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
4 4 2 0 SCOP 140996 Hermes dimerisation domain
4 4 2 0 SCOP 55277 GYF domain
4 4 1 1 SCOP 63887 P-domain of calnexin/calreticulin
4 4 3 0 SCOP 109732 HBS1-like domain
4 4 3 0 SCOP 47719 p53 tetramerization domain
4 4 3 1 SCOP 109880 A middle domain of Talin 1
3 2 2 0 SCOP 54843 Ribosomal protein L22
3 3 1 1 SCOP 54686 Ribosomal protein L16p/L10e
3 3 2 0 SCOP 52080 Ribosomal proteins L15p and L18e
3 3 3 0 SCOP 110324 Ribosomal L27 protein-like
3 2 2 0 SCOP 81333 F1F0 ATP synthase subunit C
3 3 2 1 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
3 3 2 1 SCOP 54648 DLC
3 3 2 0 SCOP 46579 Prefoldin
3 3 2 1 SCOP 52499 Isochorismatase-like hydrolases
3 3 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
3 3 2 1 SCOP 56317 Carbon-nitrogen hydrolase
3 3 3 1 SCOP 47819 HRDC-like
3 2 2 1 SCOP 69645 Arp2/3 complex subunits
3 3 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
3 3 2 1 SCOP 56529 FAH
3 3 1 1 SCOP 55418 eIF4e-like
3 3 2 0 SCOP 69118 AhpD-like
3 3 1 0 SCOP 56601 beta-lactamase/transpeptidase-like
3 3 2 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
3 3 2 1 SCOP 50800 PK beta-barrel domain-like
3 3 2 0 SCOP 110069 ApaG-like
3 3 1 1 SCOP 52335 Methylglyoxal synthase-like
3 3 2 2 SCOP 50486 FMT C-terminal domain-like
3 3 2 2 SCOP 51604 Enolase C-terminal domain-like
3 3 2 0 SCOP 50974 Nitrous oxide reductase, N-terminal domain
3 3 2 1 SCOP 100939 SPOC domain-like
3 3 2 0 SCOP 46589 tRNA-binding arm
3 3 2 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
3 3 2 0 SCOP 50960 TolB, C-terminal domain
3 3 3 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
3 3 2 0 SCOP 48619 Phospholipase A2, PLA2
3 3 2 1 SCOP 142921 WGR domain-like
3 3 3 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
3 3 3 0 SCOP 51294 Hedgehog/intein (Hint) domain
3 3 2 1 SCOP 54826 Enolase N-terminal domain-like
3 3 2 0 SCOP 51989 Glycosyl hydrolases family 6, cellulases
3 3 3 1 SCOP 55060 GHMP Kinase, C-terminal domain
3 2 2 0 SCOP 90209 Ran binding protein zinc finger-like
3 3 2 0 SCOP 49354 PapD-like
3 3 2 1 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
3 3 1 0 SCOP 47794 Rad51 N-terminal domain-like
3 3 3 0 SCOP 55271 DNA repair protein MutS, domain I
3 3 3 3 SCOP 158573 GINS helical bundle-like
3 3 2 1 SCOP 144074 E2F-DP heterodimerization region
3 3 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
3 3 2 0 SCOP 46585 HR1 repeat
3 3 3 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
3 3 1 1 SCOP 50916 Rap30/74 interaction domains
3 3 1 1 SCOP 101391 Hsp90 co-chaperone CDC37
3 3 3 1 SCOP 57933 TAZ domain
3 3 3 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
3 3 2 0 SCOP 144129 Vanabin-like
3 1 1 0 SCOP 47045 RAP domain-like
3 3 3 0 SCOP 69687 Integrin beta tail domain
3 3 3 2 SCOP 63763 SAND domain-like
3 3 2 1 SCOP 160897 Taf5 N-terminal domain-like
3 3 2 0 SCOP 144270 Eferin C-derminal domain-like
3 3 1 0 SCOP 109779 Domain from hypothetical 2610208m17rik protein
3 3 2 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
3 3 3 0 SCOP 158230 PRP4-like
2 2 1 1 SCOP 55282 RL5-like
2 2 1 0 SCOP 46946 S13-like H2TH domain
2 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
2 2 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
2 2 1 2 SCOP 51316 Mss4-like
2 2 2 1 SCOP 55821 YrdC/RibB
2 2 1 1 SCOP 51283 dUTPase-like
2 2 1 0 SCOP 89360 HesB-like domain
2 2 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
2 1 1 0 SCOP 55298 YjgF-like
2 2 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
2 2 1 1 SCOP 144122 Tim10-like
2 2 2 0 SCOP 140718 Mediator hinge subcomplex-like
2 2 2 0 SCOP 63393 RNA polymerase subunits
2 2 1 1 SCOP 54506 Diaminopimelate epimerase-like
2 2 1 1 SCOP 56019 The spindle assembly checkpoint protein mad2
2 2 2 0 SCOP 51306 LexA/Signal peptidase
2 2 1 2 SCOP 52972 ITPase-like
2 2 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
2 2 2 0 SCOP 161219 CHY zinc finger-like
2 2 2 0 SCOP 49777 PEBP-like
2 2 1 2 SCOP 55909 Pentein
2 2 1 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
2 2 1 0 SCOP 49478 Cna protein B-type domain
2 2 2 0 SCOP 143243 Nqo5-like
2 2 2 0 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
2 2 2 0 SCOP 117782 YbjQ-like
2 2 1 1 SCOP 53955 Lysozyme-like
2 2 1 1 SCOP 103365 Hypothetical protein PH1602
2 2 1 1 SCOP 50993 Peptidase/esterase 'gauge' domain
2 2 2 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
2 2 1 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
2 2 1 0 SCOP 101262 Methenyltetrahydrofolate cyclohydrolase-like
2 2 2 1 SCOP 111326 Urocanase
2 2 2 0 SCOP 50939 Sialidases
2 2 2 1 SCOP 54984 eEF-1beta-like
2 2 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
2 2 1 1 SCOP 102645 CoaB-like
2 2 1 0 SCOP 49344 CBD9-like
2 2 2 1 SCOP 142877 EndoU-like
2 2 1 1 SCOP 52935 PK C-terminal domain-like
2 2 1 1 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
2 2 2 0 SCOP 160059 PriA/YqbF domain
2 2 2 0 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
2 2 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
2 2 2 0 SCOP 81585 PsbU/PolX domain-like
2 2 2 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
2 2 1 0 SCOP 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain
2 1 1 0 SCOP 49299 PKD domain
2 2 2 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
2 2 1 0 SCOP 144284 Sec2 N-terminal region
2 2 2 0 SCOP 54991 Anticodon-binding domain of PheRS
2 2 1 0 SCOP 82061 BAH domain
2 2 2 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
2 2 1 0 SCOP 56994 Insulin-like
2 2 2 0 SCOP 56854 Bcl-2 inhibitors of programmed cell death
2 2 2 1 SCOP 55455 SRF-like
2 2 2 0 SCOP 50084 Myosin S1 fragment, N-terminal domain
2 2 1 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
2 2 1 1 SCOP 140102 ISY1 domain-like
2 2 2 0 SCOP 57414 Hairpin loop containing domain-like
2 2 2 1 SCOP 101233 PWI domain
2 2 1 1 SCOP 109925 Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
2 2 1 0 SCOP 160527 V-type ATPase subunit E-like
2 2 2 0 SCOP 109775 Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
2 2 2 0 SCOP 143503 PUG domain-like
2 2 2 0 SCOP 143575 GAS2 domain-like
2 2 2 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
2 2 1 1 SCOP 81327 Small-conductance potassium channel
2 2 2 2 SCOP 89009 GAT-like domain
2 2 1 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
2 2 1 0 SCOP 158457 Orange domain-like
2 2 1 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
2 2 2 1 SCOP 140482 MAST3 pre-PK domain-like
2 2 2 0 SCOP 158548 FLJ32549 domain-like
1 1 1 1 SCOP 53790 Tetrapyrrole methylase
1 1 1 0 SCOP 46911 Ribosomal protein S18
1 1 1 0 SCOP 54999 Ribosomal protein S10
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 50193 Ribosomal protein L14
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 0 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 64182 DHH phosphoesterases
1 1 1 0 SCOP 143034 L35p-like
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 0 SCOP 141091 L21p-like
1 1 1 1 SCOP 51658 Xylose isomerase-like
1 1 1 0 SCOP 143800 L28p-like
1 1 1 1 SCOP 75620 Release factor
1 1 1 0 SCOP 75625 YebC-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 50324 Inorganic pyrophosphatase
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 1 SCOP 52161 Ribosomal protein L13
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 51713 tRNA-guanine transglycosylase
1 1 1 1 SCOP 64005 Undecaprenyl diphosphate synthase
1 1 1 1 SCOP 55205 EPT/RTPC-like
1 1 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
1 1 1 1 SCOP 56796 Dehydroquinate synthase-like
1 1 1 0 SCOP 48140 Ribosomal protein L19 (L19e)
1 1 1 0 SCOP 52042 Ribosomal protein L32e
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 54575 Ribosomal protein L31e
1 1 1 1 SCOP 69500 DTD-like
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 1 SCOP 51726 UROD/MetE-like
1 1 1 0 SCOP 103456 Preprotein translocase SecE subunit
1 1 1 1 SCOP 53590 Nucleoside hydrolase
1 1 1 1 SCOP 57798 Casein kinase II beta subunit
1 1 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 55144 LigT-like
1 1 1 1 SCOP 55248 PCD-like
1 1 1 0 SCOP 144210 Nop10-like SnoRNP
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
1 1 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 0 SCOP 53639 AraD/HMP-PK domain-like
1 1 1 0 SCOP 110849 ParB/Sulfiredoxin
1 1 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
1 1 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
1 1 1 0 SCOP 81427 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
1 1 1 0 SCOP 64153 YjeF N-terminal domain-like
1 1 1 0 SCOP 55770 Profilin (actin-binding protein)
1 1 1 1 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 0 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
1 1 1 1 SCOP 81342 Transmembrane di-heme cytochromes
1 1 1 1 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 101546 ASF1-like
1 1 1 0 SCOP 101478 ADP-ribosylglycohydrolase
1 1 1 0 SCOP 52172 CheY-like
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 0 SCOP 55331 Tautomerase/MIF
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 54447 ssDNA-binding transcriptional regulator domain
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
1 1 1 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
1 1 1 0 SCOP 55154 CYTH-like phosphatases
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 56762 HydB/Nqo4-like
1 1 1 0 SCOP 111304 Recombination protein RecR
1 1 1 1 SCOP 117856 AF0104/ALDC/Ptd012-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 1 SCOP 89028 Cobalamin adenosyltransferase-like
1 1 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 1 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 0 SCOP 55826 YbaK/ProRS associated domain
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 1 SCOP 160909 ATP12-like
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 0 SCOP 140931 Fic-like
1 1 1 0 SCOP 55021 ACT-like
1 1 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
1 1 1 1 SCOP 51703 Cobalamin (vitamin B12)-dependent enzymes
1 1 1 0 SCOP 159659 Cgl1923-like
1 1 1 1 SCOP 103196 Roadblock/LC7 domain
1 1 1 0 SCOP 117070 LEA14-like
1 1 1 0 SCOP 52309 N-(deoxy)ribosyltransferase-like
1 1 1 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
1 1 1 0 SCOP 160631 SMI1/KNR4-like
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 1 SCOP 74784 Translin
1 1 1 1 SCOP 50346 PRC-barrel domain
1 1 1 0 SCOP 111321 AF1104-like
1 1 1 0 SCOP 160350 Rnp2-like
1 1 1 1 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 1 SCOP 55895 Ribonuclease Rh-like
1 1 1 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
1 1 1 0 SCOP 158832 Tex N-terminal region-like
1 1 1 0 SCOP 54403 Cystatin/monellin
1 1 1 1 SCOP 82114 Riboflavin kinase-like
1 1 1 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
1 1 1 0 SCOP 48230 Chondroitin AC/alginate lyase
1 1 1 0 SCOP 69989 C-terminal domain of PLC-beta
1 1 1 0 SCOP 58026 Delta-sleep-inducing peptide immunoreactive peptide
1 1 1 0 SCOP 54106 LysM domain
1 1 1 0 SCOP 103190 Sensory domain-like
1 1 1 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
1 1 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 49384 Carbohydrate-binding domain
1 1 1 0 SCOP 55658 L9 N-domain-like
1 1 1 1 SCOP 144206 NOB1 zinc finger-like
1 1 1 0 SCOP 158745 LanC-like
1 1 1 1 SCOP 103359 Suppressor of Fused, N-terminal domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 0 SCOP 51120 beta-Roll
1 1 1 1 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 0 SCOP 143548 Serine metabolism enzymes domain
1 1 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 0 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 110836 Hypothetical protein SAV1430
1 1 1 0 SCOP 117289 Nucleoporin domain
1 1 1 1 SCOP 101887 Apyrase
1 1 1 1 SCOP 55637 Cell cycle regulatory proteins
1 1 1 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
1 1 1 0 SCOP 48431 Lipovitellin-phosvitin complex, superhelical domain
1 1 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
1 1 1 0 SCOP 101494 Stathmin
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 0 SCOP 111357 Mitochondrial ATP synthase coupling factor 6
1 1 1 0 SCOP 69203 Nucleoplasmin-like core domain
1 1 1 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
1 1 1 0 SCOP 81415 Mitochondrial cytochrome c oxidase subunit VIc
1 1 1 0 SCOP 57630 GLA-domain
1 1 1 0 SCOP 57256 Elafin-like
1 1 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
1 1 1 0 SCOP 82671 SEA domain
1 1 1 0 SCOP 56968 Lipovitellin-phosvitin complex; beta-sheet shell regions
1 1 1 1 SCOP 158639 ENT-like
1 1 1 1 SCOP 75001 Dipeptidyl peptidase I (cathepsin C), exclusion domain
1 1 1 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
1 1 1 0 SCOP 81601 Protein serine/threonine phosphatase 2C, C-terminal domain
1 1 1 0 SCOP 161065 ATP synthase D chain-like
1 1 1 1 SCOP 47668 N-terminal domain of cbl (N-cbl)
1 1 1 0 SCOP 81730 beta-catenin-interacting protein ICAT
1 1 1 0 SCOP 140106 Calcyclin-binding protein-like
1 1 1 1 SCOP 143875 ERH-like
1 1 1 0 SCOP 140361 MIT domain-like
1 1 1 0 SCOP 63491 BAG domain
1 1 1 0 SCOP 48479 Cytochrome c oxidase subunit E
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 57586 TNF receptor-like
1 1 1 1 SCOP 54529 Mitochondrial glycoprotein MAM33-like
1 1 1 0 SCOP 82927 Cysteine-rich DNA binding domain, (DM domain)
1 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 0 SCOP 161060 ATP synthase B chain-like
1 1 1 0 SCOP 144292 occludin/ELL-like
1 1 1 1 SCOP 47040 Kix domain of CBP (creb binding protein)
1 1 1 1 SCOP 89942 eEF1-gamma domain
1 1 1 0 SCOP 140111 Endosomal sorting complex assembly domain
1 1 1 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
1 1 1 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
1 1 1 0 SCOP 109715 DEK C-terminal domain
1 1 1 0 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
1 1 1 0 SCOP 54556 Chitinase insertion domain
1 1 1 1 SCOP 81382 Skp1 dimerisation domain-like
1 1 1 0 SCOP 140427 VPS28 C-terminal domain-like
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
1 1 1 1 SCOP 102031 AXH domain
1 1 1 1 SCOP 159042 Plus3-like
1 1 1 0 SCOP 110035 GDNF receptor-like
1 1 1 1 SCOP 88802 Pre-PUA domain
1 1 1 0 SCOP 158553 TAFH domain-like
1 1 1 1 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
1 1 1 0 SCOP 161245 Zinc hairpin stack
1 1 1 1 SCOP 102860 mRNA decapping enzyme DcpS N-terminal domain
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 160651 FLJ32549 C-terminal domain-like
1 1 1 1 SCOP 160219 AMPKBI-like
1 1 1 0 SCOP 140586 Dcp2 domain-like
1 1 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
1 1 1 0 SCOP 81502 ISP transmembrane anchor
1 1 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
1 1 1 0 SCOP 111479 Fzo-like conserved region
1 1 1 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
1 1 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 161256 RILP dimerisation region
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 101238 XPC-binding domain
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 52913 RNA 3'-terminal phosphate cyclase, RPTC, insert domain
1 1 1 0 SCOP 140125 Rabenosyn-5 Rab-binding domain-like
1 1 1 0 SCOP 101283 GRIP domain
1 1 1 0 SCOP 111469 Geminin coiled-coil domain
1 1 1 0 SCOP 57953 Trimerization domain of TRAF

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily GCM domain
SCOP superfamily Hypothetical protein YjiA, C-terminal domain
SCOP superfamily Hypothetical protein Yml108w
SCOP superfamily MTH1187/YkoF-like
SCOP superfamily Fucose-specific lectin
SCOP superfamily Hypothetical protein TM1070
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily Antibiotic binding domain of TipA-like multidrug resistance regulators
SCOP superfamily N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors
SCOP superfamily ssDNA viruses
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Tumor suppressor gene product Apc
SCOP superfamily MesJ substrate recognition domain-like
SCOP superfamily YbaB-like
SCOP superfamily BRCA2 tower domain
SCOP superfamily SopE-like GEF domain
SCOP superfamily Nucleotidyltransferase substrate binding subunit/domain
SCOP superfamily Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Bacterial photosystem II reaction centre, L and M subunits
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily Rotavirus NSP2 fragment, N-terminal domain
SCOP superfamily Archaeal IMP cyclohydrolase PurO
SCOP superfamily Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
SCOP superfamily Putative transcriptional regulator TM1602, C-terminal domain
SCOP superfamily Hypothetical protein MTH1880
SCOP superfamily Arabinanase/levansucrase/invertase
SCOP superfamily Lamin A/C globular tail domain
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily Ribosomal protein L20
SCOP superfamily Colicin E3 receptor domain
SCOP superfamily NSP3 homodimer
SCOP superfamily Transcription factor NusA, N-terminal domain
SCOP superfamily SRP19
SCOP superfamily HemD-like
SCOP superfamily Cloacin translocation domain
SCOP superfamily Cell wall binding repeat
SCOP superfamily Phage fibre proteins
SCOP superfamily Tricorn protease N-terminal domain
SCOP superfamily Quinohemoprotein amine dehydrogenase C chain
SCOP superfamily Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain
SCOP superfamily Bcr-Abl oncoprotein oligomerization domain
SCOP superfamily RecG, N-terminal domain
SCOP superfamily FAD-dependent thiol oxidase
SCOP superfamily Phase 1 flagellin
SCOP superfamily Cell-division protein ZipA, C-terminal domain
SCOP superfamily Cytolysin/lectin
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Bacterial hemolysins
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Multimerization domain of the phosphoprotein from sendai virus
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Assembly domain of cartilage oligomeric matrix protein
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Triple coiled coil domain of C-type lectins
SCOP superfamily Rubredoxin-like
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily Methylamine dehydrogenase, L chain
SCOP superfamily PMP inhibitors
SCOP superfamily Plant lectins/antimicrobial peptides
SCOP superfamily Anthrax protective antigen
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily Exotoxin A, middle domain
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Upper collar protein gp10 (connector protein)
SCOP superfamily HydA/Nqo6-like
SCOP superfamily Baseplate structural protein gp11
SCOP superfamily gp120 core
SCOP superfamily Ribosome inactivating proteins (RIP)
SCOP superfamily PheT/TilS domain
SCOP superfamily Nitrite and sulphite reductase 4Fe-4S domain-like
SCOP superfamily Sporulation response regulatory protein Spo0B
SCOP superfamily Mog1p/PsbP-like
SCOP superfamily FMN-dependent nitroreductase-like
SCOP superfamily Origin of replication-binding domain, RBD-like
SCOP superfamily Ribosome recycling factor, RRF
SCOP superfamily Acylphosphatase/BLUF domain-like
SCOP superfamily DNA damage-inducible protein DinI
SCOP superfamily Interleukin 8-like chemokines
SCOP superfamily RNase A-like
SCOP superfamily "Helical backbone" metal receptor
SCOP superfamily Carbamate kinase-like
SCOP superfamily B12-dependent dehydatase associated subunit
SCOP superfamily Cryptochrome/photolyase, N-terminal domain
SCOP superfamily Type II 3-dehydroquinate dehydratase
SCOP superfamily Fibre shaft of virus attachment proteins
SCOP superfamily An insect antifreeze protein
SCOP superfamily Thermostable phytase (3-phytase)
SCOP superfamily XRCC4, N-terminal domain
SCOP superfamily Herpes virus serine proteinase, assemblin
SCOP superfamily Barwin-like endoglucanases
SCOP superfamily mu transposase, C-terminal domain
SCOP superfamily Agglutinin
SCOP superfamily Osmotin, thaumatin-like protein
SCOP superfamily Virus attachment protein globular domain
SCOP superfamily Viral protein domain
SCOP superfamily Neurophysin II
SCOP superfamily Rab geranylgeranyltransferase alpha-subunit, insert domain
SCOP superfamily PHL pollen allergen
SCOP superfamily Invasin/intimin cell-adhesion fragments
SCOP superfamily Multiheme cytochromes
SCOP superfamily Fungal elicitin
SCOP superfamily Serum albumin-like
SCOP superfamily Aldehyde ferredoxin oxidoreductase, C-terminal domains
SCOP superfamily TrpR-like
SCOP superfamily Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
SCOP superfamily FliG
SCOP superfamily ERP29 C domain-like
SCOP superfamily Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
SCOP superfamily C-terminal domain of RNA polymerase alpha subunit
SCOP superfamily IHF-like DNA-binding proteins
SCOP superfamily Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
SCOP superfamily Anaphylotoxins (complement system)
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily Retrovirus capsid dimerization domain-like
SCOP superfamily 4-helical cytokines
SCOP superfamily Bacterial GAP domain
SCOP superfamily Histidine-containing phosphotransfer domain, HPT domain
SCOP superfamily Cytochromes
SCOP superfamily Apolipoprotein
SCOP superfamily Methane monooxygenase hydrolase, gamma subunit
SCOP superfamily T4 endonuclease V
SCOP superfamily Cysteine alpha-hairpin motif
SCOP superfamily Tubulin chaperone cofactor A
SCOP superfamily Methylated DNA-protein cysteine methyltransferase, C-terminal domain
SCOP superfamily GreA transcript cleavage protein, N-terminal domain
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily MetI-like
SCOP superfamily Photosystem II reaction center protein M, PsbM
SCOP superfamily Photosystem II reaction center protein L, PsbL
SCOP superfamily FlhC-like
SCOP superfamily Jann2411-like
SCOP superfamily BLRF2-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily FlaG-like
SCOP superfamily NMB0488-like
SCOP superfamily BC4932-like
SCOP superfamily Smr-associated domain-like
SCOP superfamily NEAT domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily PSPTO4464-like
SCOP superfamily RPA2825-like
SCOP superfamily YqcC-like
SCOP superfamily Ta0600-like
SCOP superfamily HP0062-like
SCOP superfamily MPN010-like
SCOP superfamily Magnesium transport protein CorA, transmembrane region
SCOP superfamily ImpE-like
SCOP superfamily Thermophilic metalloprotease-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily NE0471 N-terminal domain-like
SCOP superfamily CorA soluble domain-like
SCOP superfamily CcmK-like
SCOP superfamily PhtA domain-like
SCOP superfamily L,D-transpeptidase catalytic domain-like
SCOP superfamily PilZ domain-like
SCOP superfamily CarD-like
SCOP superfamily Acetamidase/Formamidase-like
SCOP superfamily RelB-like
SCOP superfamily DNA terminal protein
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily GUN4-like
SCOP superfamily Phage replication organizer domain
SCOP superfamily IpaD-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily EB1 dimerisation domain-like
SCOP superfamily EF2947-like
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily FlgN-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily EF2458-like
SCOP superfamily Expressed protein At2g23090/F21P24.15
SCOP superfamily WRKY DNA-binding domain
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Connexin43
SCOP superfamily RalF, C-terminal domain
SCOP superfamily TM1631-like
SCOP superfamily Flagellar hook protein flgE
SCOP superfamily Hypothetical protein PA1324
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily RNA-binding protein She2p
SCOP superfamily Avirulence protein AvrPto
SCOP superfamily XseB-like
SCOP superfamily TrkA C-terminal domain-like
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily YAP1 redox domain
SCOP superfamily Resistin
SCOP superfamily Hormone receptor domain
SCOP superfamily OmpH-like
SCOP superfamily Putative modulator of DNA gyrase, PmbA/TldD
SCOP superfamily Sulfolobus fructose-1,6-bisphosphatase-like
SCOP superfamily TmoB-like
SCOP superfamily CutC-like
SCOP superfamily AbfB domain
SCOP superfamily Ctag/Cox11
SCOP superfamily Her-1
SCOP superfamily Hypothetical protein MG354
SCOP superfamily Triger factor/SurA peptide-binding domain-like
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily PhoU-like
SCOP superfamily Transcriptional repressor TraM
SCOP superfamily Sec-C motif
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily 39 kda initiator binding protein, IBP39, C-terminal domains
SCOP superfamily Virulence-associated V antigen
SCOP superfamily Chorismate synthase, AroC
SCOP superfamily MCP/YpsA-like
SCOP superfamily (2r)-phospho-3-sulfolactate synthase ComA
SCOP superfamily Trimeric adhesin
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily Hypothetical protein YfhH
SCOP superfamily DhaL-like
SCOP superfamily P40 nucleoprotein
SCOP superfamily all-alpha NTP pyrophosphatases
SCOP superfamily Superantigen MAM
SCOP superfamily YcfC-like
SCOP superfamily Invasion protein A (SipA) , C-terminal actin binding domain
SCOP superfamily Docking domain B of the erythromycin polyketide synthase (DEBS)
SCOP superfamily Plant invertase/pectin methylesterase inhibitor
SCOP superfamily Typo IV secretion system protein TraC

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.