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  Home > Genomes > Superfamily assignments for Caenorhabditis elegans 76_235


Caenorhabditis elegans 76_235 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 30250 total
16476 (54 %) with assignment
448 average length
40 % amino acid coverage
Domains: 29666 total
944 unique superfamilies
788 unique families
326 average length
31.4 average superfamily size
97 % formed by duplication
Domain combinations: 979 domain pairs
3358 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
1705 181 91 1 SCOP 48726 Immunoglobulin
1160 1154 10 1 SCOP 81321 Family A G protein-coupled receptor-like
1011 849 153 12 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
914 893 130 3 SCOP 56112 Protein kinase-like (PK-like)
610 503 43 1 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
528 152 77 0 SCOP 57196 EGF/Laminin
510 78 40 0 SCOP 57362 BPTI-like
502 104 67 1 SCOP 49265 Fibronectin type III
485 114 39 6 SCOP 81296 E set domains
467 319 48 1 SCOP 54928 RNA-binding domain, RBD
438 438 13 1 SCOP 48508 Nuclear receptor ligand-binding domain
417 319 39 3 SCOP 56436 C-type lectin-like
379 324 66 14 SCOP 48371 ARM repeat
365 225 27 0 SCOP 81324 Voltage-gated potassium channels
352 190 34 0 SCOP 57667 beta-beta-alpha zinc fingers
328 33 23 1 SCOP 46966 Spectrin repeat
327 304 115 6 SCOP 50729 PH domain-like
326 175 58 1 SCOP 50156 PDZ domain-like
323 263 60 3 SCOP 57850 RING/U-box
317 314 8 0 SCOP 103473 MFS general substrate transporter
291 277 13 10 SCOP 53474 alpha/beta-Hydrolases
290 172 40 1 SCOP 52058 L domain-like
284 260 42 1 SCOP 50978 WD40 repeat-like
258 201 20 3 SCOP 52833 Thioredoxin-like
250 244 29 2 SCOP 54695 POZ domain
245 132 47 3 SCOP 49899 Concanavalin A-like lectins/glucanases
234 192 33 4 SCOP 46689 Homeodomain-like
231 31 22 0 SCOP 49313 Cadherin-like
230 226 33 8 SCOP 51735 NAD(P)-binding Rossmann-fold domains
225 191 52 3 SCOP 47473 EF-hand
218 167 56 1 SCOP 48403 Ankyrin repeat
214 128 27 2 SCOP 49599 TRAF domain-like
209 163 52 4 SCOP 54236 Ubiquitin-like
209 177 31 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
206 153 72 1 SCOP 50044 SH3-domain
204 156 37 2 SCOP 48452 TPR-like
198 54 27 0 SCOP 82895 TSP-1 type 1 repeat
191 172 11 13 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
183 173 38 8 SCOP 46785 "Winged helix" DNA-binding domain
177 44 31 0 SCOP 57424 LDL receptor-like module
160 113 47 2 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
159 155 30 9 SCOP 54001 Cysteine proteinases
147 143 27 7 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
143 86 28 0 SCOP 49854 Spermadhesin, CUB domain
141 78 14 5 SCOP 53067 Actin-like ATPase domain
141 67 23 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
139 139 7 0 SCOP 63712 Nicotinic receptor ligand binding domain-like
133 131 22 9 SCOP 56784 HAD-like
131 105 36 3 SCOP 53300 vWA-like
127 122 24 4 SCOP 53098 Ribonuclease H-like
127 127 7 1 SCOP 90112 Neurotransmitter-gated ion-channel transmembrane pore
126 125 5 2 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
126 19 12 0 SCOP 57535 Complement control module/SCR domain
122 104 42 1 SCOP 57903 FYVE/PHD zinc finger
120 120 6 1 SCOP 49354 PapD-like
120 56 37 1 SCOP 57184 Growth factor receptor domain
116 116 14 0 SCOP 81383 F-box domain
113 80 42 0 SCOP 57889 Cysteine-rich domain
109 107 7 6 SCOP 53383 PLP-dependent transferases
109 103 24 9 SCOP 51445 (Trans)glycosidases
108 108 7 1 SCOP 103506 Mitochondrial carrier
106 106 8 7 SCOP 53448 Nucleotide-diphospho-sugar transferases
101 96 32 1 SCOP 55550 SH2 domain
100 100 5 1 SCOP 47113 Histone-fold
99 85 33 6 SCOP 50249 Nucleic acid-binding proteins
99 77 26 4 SCOP 51905 FAD/NAD(P)-binding domain
99 76 30 4 SCOP 49785 Galactose-binding domain-like
94 94 10 3 SCOP 56300 Metallo-dependent phosphatases
94 37 16 0 SCOP 57567 Serine protease inhibitors
93 66 13 2 SCOP 47954 Cyclin-like
90 57 5 0 SCOP 90123 ABC transporter transmembrane region
87 87 9 1 SCOP 47616 GST C-terminal domain-like
87 73 27 0 SCOP 47769 SAM/Pointed domain
86 81 12 2 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
86 85 4 1 SCOP 48264 Cytochrome P450
84 79 31 1 SCOP 47576 Calponin-homology domain, CH-domain
81 74 18 2 SCOP 52047 RNI-like
81 81 33 2 SCOP 48350 GTPase activation domain, GAP
80 41 14 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
79 43 5 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
77 53 14 1 SCOP 51206 cAMP-binding domain-like
72 70 28 7 SCOP 54211 Ribosomal protein S5 domain 2-like
72 72 11 1 SCOP 81665 Calcium ATPase, transmembrane domain M
71 55 6 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
71 71 10 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
69 32 14 0 SCOP 57414 Hairpin loop containing domain-like
68 68 7 1 SCOP 81653 Calcium ATPase, transduction domain A
64 22 10 0 SCOP 57625 Invertebrate chitin-binding proteins
61 21 8 1 SCOP 90257 Myosin rod fragments
60 18 6 0 SCOP 63829 Calcium-dependent phosphotriesterase
60 57 8 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
60 58 28 1 SCOP 48065 DBL homology domain (DH-domain)
60 39 8 0 SCOP 90229 CCCH zinc finger
59 58 19 1 SCOP 53822 Periplasmic binding protein-like I
58 58 17 2 SCOP 103657 BAR/IMD domain-like
57 56 6 0 SCOP 57959 Leucine zipper domain
56 33 25 0 SCOP 51045 WW domain
55 51 14 1 SCOP 55073 Nucleotide cyclase
55 55 18 1 SCOP 46565 Chaperone J-domain
55 54 21 1 SCOP 47031 Second domain of FERM
54 50 19 3 SCOP 52374 Nucleotidylyl transferase
54 54 5 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
54 37 15 0 SCOP 52113 BRCT domain
54 15 8 1 SCOP 47220 alpha-catenin/vinculin-like
53 53 13 4 SCOP 53187 Zn-dependent exopeptidases
53 53 9 2 SCOP 54427 NTF2-like
53 52 16 2 SCOP 50447 Translation proteins
53 17 5 1 SCOP 63411 LuxS/MPP-like metallohydrolase
53 51 17 0 SCOP 46934 UBA-like
52 51 5 1 SCOP 46458 Globin-like
52 3 2 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
49 49 8 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
49 5 3 0 SCOP 75399 Plakin repeat
48 45 8 1 SCOP 56801 Acetyl-CoA synthetase-like
48 25 9 0 SCOP 64593 Intermediate filament protein, coiled coil region
47 47 19 2 SCOP 55681 Class II aaRS and biotin synthetases
47 47 14 0 SCOP 82199 SET domain
46 34 15 1 SCOP 47370 Bromodomain
46 41 16 1 SCOP 48097 Regulator of G-protein signaling, RGS
46 10 6 0 SCOP 81698 FF domain
45 45 5 2 SCOP 53254 Phosphoglycerate mutase-like
45 45 11 3 SCOP 54495 UBC-like
45 42 6 0 SCOP 55797 PR-1-like
44 44 5 1 SCOP 53720 ALDH-like
44 34 11 3 SCOP 52096 ClpP/crotonase
44 19 9 0 SCOP 58113 Apolipoprotein A-I
42 36 8 1 SCOP 47095 HMG-box
41 23 8 0 SCOP 63748 Tudor/PWWP/MBT
40 40 5 2 SCOP 53649 Alkaline phosphatase-like
40 34 10 1 SCOP 57997 Tropomyosin
40 40 11 1 SCOP 49879 SMAD/FHA domain
40 28 13 0 SCOP 54160 Chromo domain-like
40 40 8 4 SCOP 49417 p53-like transcription factors
40 34 10 0 SCOP 47862 Saposin
39 20 8 2 SCOP 52777 CoA-dependent acyltransferases
39 39 9 1 SCOP 101690 PAZ domain
38 36 11 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
38 38 6 0 SCOP 57302 Snake toxin-like
37 36 18 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
37 37 11 1 SCOP 51197 Clavaminate synthase-like
37 34 7 1 SCOP 50814 Lipocalins
36 21 5 1 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
36 14 3 1 SCOP 55973 S-adenosylmethionine synthetase
35 34 6 1 SCOP 50630 Acid proteases
35 26 17 0 SCOP 57756 Retrovirus zinc finger-like domains
34 21 5 5 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
34 27 8 1 SCOP 54631 CBS-domain pair
34 34 17 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
34 22 5 1 SCOP 111347 Rap/Ran-GAP
33 33 7 0 SCOP 54897 Protease propeptides/inhibitors
33 31 5 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
33 11 6 0 SCOP 100895 Kazal-type serine protease inhibitors
32 32 6 2 SCOP 109604 HD-domain/PDEase-like
32 25 13 1 SCOP 117281 Kelch motif
31 22 5 1 SCOP 50129 GroES-like
31 8 5 0 SCOP 57603 FnI-like domain
30 21 8 0 SCOP 52821 Rhodanese/Cell cycle control phosphatase
30 30 4 1 SCOP 49764 HSP20-like chaperones
30 30 2 1 SCOP 47895 Transducin (alpha subunit), insertion domain
30 30 9 3 SCOP 48464 ENTH/VHS domain
29 29 8 2 SCOP 81301 Nucleotidyltransferase
29 27 4 0 SCOP 56994 Insulin-like
29 29 4 1 SCOP 57501 Cystine-knot cytokines
29 17 8 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
28 28 12 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
28 26 7 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
28 28 4 2 SCOP 50182 Sm-like ribonucleoproteins
28 27 14 1 SCOP 64268 PX domain
28 23 7 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
28 27 6 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
27 27 3 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
27 13 6 2 SCOP 55753 Actin depolymerizing proteins
27 17 7 0 SCOP 55785 PYP-like sensor domain (PAS domain)
27 14 5 1 SCOP 53901 Thiolase-like
27 14 5 1 SCOP 54980 EF-G C-terminal domain-like
27 26 7 1 SCOP 81631 PAP/OAS1 substrate-binding domain
27 27 5 1 SCOP 109993 VPS9 domain
27 27 2 1 SCOP 81382 Skp1 dimerisation domain-like
26 26 10 6 SCOP 51556 Metallo-dependent hydrolases
26 22 8 1 SCOP 58038 SNARE fusion complex
26 26 8 1 SCOP 50891 Cyclophilin-like
26 26 6 1 SCOP 48208 Six-hairpin glycosidases
26 18 13 0 SCOP 54768 dsRNA-binding domain-like
26 26 12 2 SCOP 54373 FAD-linked reductases, C-terminal domain
26 26 4 0 SCOP 117892 Band 7/SPFH domain
26 26 6 2 SCOP 103243 KA1-like
25 25 5 1 SCOP 50104 Translation proteins SH3-like domain
25 25 14 1 SCOP 51695 PLC-like phosphodiesterases
25 24 9 0 SCOP 52151 FabD/lysophospholipase-like
25 25 6 2 SCOP 55931 Glutamine synthetase/guanido kinase
25 25 10 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
25 25 10 1 SCOP 82171 DPP6 N-terminal domain-like
25 25 4 1 SCOP 48592 GroEL equatorial domain-like
25 11 9 1 SCOP 63825 YWTD domain
25 25 8 0 SCOP 74853 Lamin A/C globular tail domain
25 25 4 2 SCOP 52029 GroEL apical domain-like
25 25 10 1 SCOP 48366 Ras GEF
25 25 14 1 SCOP 52087 CRAL/TRIO domain
24 22 6 2 SCOP 53271 PRTase-like
24 24 3 1 SCOP 81338 Aquaporin-like
24 22 4 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
24 16 9 1 SCOP 54534 FKBP-like
24 18 6 0 SCOP 57610 Thyroglobulin type-1 domain
24 24 8 0 SCOP 144232 HIT/MYND zinc finger-like
24 24 8 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
24 24 2 1 SCOP 51092 Vitelline membrane outer protein-I (VMO-I)
23 16 4 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
23 23 5 1 SCOP 56601 beta-lactamase/transpeptidase-like
23 22 6 0 SCOP 50494 Trypsin-like serine proteases
23 23 8 2 SCOP 56219 DNase I-like
23 12 6 1 SCOP 56024 Phospholipase D/nuclease
23 23 2 1 SCOP 55307 Tubulin C-terminal domain-like
23 23 7 0 SCOP 57845 B-box zinc-binding domain
23 23 2 0 SCOP 48652 Tetraspanin
22 22 4 1 SCOP 75304 Amidase signature (AS) enzymes
22 22 10 3 SCOP 56672 DNA/RNA polymerases
22 22 3 1 SCOP 56574 Serpins
22 22 1 1 SCOP 52490 Tubulin nucleotide-binding domain-like
22 22 4 0 SCOP 50370 Ricin B-like lectins
22 22 9 0 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
21 21 10 1 SCOP 55920 Creatinase/aminopeptidase
21 21 7 0 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
21 21 8 2 SCOP 55961 Bet v1-like
21 21 9 0 SCOP 52954 Class II aaRS ABD-related
21 21 3 1 SCOP 53795 PEP carboxykinase-like
21 21 5 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
21 21 7 1 SCOP 52743 Subtilisin-like
21 21 11 1 SCOP 47986 DEATH domain
21 11 3 1 SCOP 82109 MIR domain
20 20 12 1 SCOP 53850 Periplasmic binding protein-like II
20 20 2 1 SCOP 68923 PEP carboxykinase N-terminal domain
20 20 2 0 SCOP 90250 Troponin coil-coiled subunits
19 19 5 1 SCOP 81606 PP2C-like
19 15 5 4 SCOP 100950 NagB/RpiA/CoA transferase-like
19 19 6 1 SCOP 51395 FMN-linked oxidoreductases
19 19 7 3 SCOP 64356 SNARE-like
19 19 12 1 SCOP 51230 Single hybrid motif
19 19 6 0 SCOP 161111 Cation efflux protein transmembrane domain-like
19 19 10 1 SCOP 101898 NHL repeat
19 19 6 0 SCOP 51011 Glycosyl hydrolase domain
19 19 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
19 19 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
19 19 4 1 SCOP 63570 PABC (PABP) domain
19 16 7 0 SCOP 82927 Cysteine-rich DNA binding domain, (DM domain)
19 19 2 0 SCOP 54849 GroEL-intermediate domain like
19 11 3 1 SCOP 141739 MFPT repeat-like
18 8 7 0 SCOP 47060 S15/NS1 RNA-binding domain
18 18 7 2 SCOP 55315 L30e-like
18 15 6 2 SCOP 52768 Arginase/deacetylase
18 18 4 1 SCOP 161070 SNF-like
18 16 3 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
18 18 8 1 SCOP 56204 Hect, E3 ligase catalytic domain
18 15 6 1 SCOP 57933 TAZ domain
17 17 3 1 SCOP 51430 NAD(P)-linked oxidoreductase
17 14 5 1 SCOP 48113 Heme-dependent peroxidases
17 15 4 2 SCOP 47413 lambda repressor-like DNA-binding domains
17 8 4 0 SCOP 54106 LysM domain
17 16 11 1 SCOP 52440 PreATP-grasp domain
17 9 2 0 SCOP 56968 Lipovitellin-phosvitin complex; beta-sheet shell regions
17 17 5 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
17 17 1 1 SCOP 81327 Small-conductance potassium channel
16 16 3 2 SCOP 51569 Aldolase
16 7 5 0 SCOP 47336 ACP-like
16 10 3 0 SCOP 81333 F1F0 ATP synthase subunit C
16 16 5 3 SCOP 56104 SAICAR synthase-like
16 16 4 2 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
16 16 5 4 SCOP 52467 DHS-like NAD/FAD-binding domain
16 12 7 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
16 16 5 0 SCOP 100939 SPOC domain-like
16 16 5 1 SCOP 56176 FAD-binding/transporter-associated domain-like
16 8 2 0 SCOP 161093 MgtE membrane domain-like
16 15 8 0 SCOP 90209 Ran binding protein zinc finger-like
16 10 2 1 SCOP 100909 IP3 receptor type 1 binding core, domain 2
15 15 4 1 SCOP 55811 Nudix
15 15 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
15 15 3 5 SCOP 51182 RmlC-like cupins
15 14 7 0 SCOP 57783 Zinc beta-ribbon
15 11 5 0 SCOP 143990 YbiA-like
15 15 9 2 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
15 15 9 2 SCOP 63380 Riboflavin synthase domain-like
15 15 4 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
15 8 4 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
14 14 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
14 14 5 2 SCOP 74650 Galactose mutarotase-like
14 14 2 1 SCOP 55418 eIF4e-like
14 14 3 0 SCOP 52266 SGNH hydrolase
14 14 4 1 SCOP 50800 PK beta-barrel domain-like
14 14 3 0 SCOP 51294 Hedgehog/intein (Hint) domain
14 11 8 1 SCOP 158702 Sec63 N-terminal domain-like
14 14 4 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
14 14 5 1 SCOP 74788 Cullin repeat-like
14 14 4 0 SCOP 111418 Hormone receptor domain
14 14 7 1 SCOP 101912 Sema domain
14 14 2 0 SCOP 110942 HSP90 C-terminal domain
13 12 4 2 SCOP 53927 Cytidine deaminase-like
13 13 3 0 SCOP 57829 Zn-binding ribosomal proteins
13 13 2 2 SCOP 53697 SIS domain
13 13 8 1 SCOP 50985 RCC1/BLIP-II
13 13 6 1 SCOP 144000 Oxysterol-binding protein-like
13 13 2 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
13 9 3 1 SCOP 49503 Cupredoxins
13 7 2 1 SCOP 141072 CalX-like
13 13 2 1 SCOP 101152 Mob1/phocein
13 13 6 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
13 13 3 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
13 13 3 1 SCOP 48034 Guanido kinase N-terminal domain
13 12 4 1 SCOP 49758 Calpain large subunit, middle domain (domain III)
12 12 2 0 SCOP 56808 Ribosomal protein L1
12 12 4 2 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
12 12 7 1 SCOP 47027 Acyl-CoA binding protein
12 12 3 1 SCOP 53955 Lysozyme-like
12 12 6 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
12 12 7 1 SCOP 51246 Rudiment single hybrid motif
12 12 4 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
12 12 4 1 SCOP 81837 BEACH domain
12 12 4 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
12 7 4 1 SCOP 109885 I/LWEQ domain
12 11 5 1 SCOP 47040 Kix domain of CBP (creb binding protein)
12 12 3 1 SCOP 63501 Frizzled cysteine-rich domain
12 12 3 1 SCOP 89009 GAT-like domain
11 4 4 0 SCOP 51126 Pectin lyase-like
11 11 2 1 SCOP 81340 Clc chloride channel
11 11 2 1 SCOP 55804 Phoshotransferase/anion transport protein
11 11 3 1 SCOP 47661 t-snare proteins
11 11 6 1 SCOP 52129 Caspase-like
11 11 3 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
11 4 3 1 SCOP 53738 Phosphoglucomutase, first 3 domains
11 11 4 1 SCOP 74924 Cap-Gly domain
11 11 6 0 SCOP 103575 Plexin repeat
11 11 3 1 SCOP 48425 Sec7 domain
11 11 3 1 SCOP 75632 Cullin homology domain
10 9 7 2 SCOP 52317 Class I glutamine amidotransferase-like
10 9 5 3 SCOP 54197 HIT-like
10 10 5 1 SCOP 55120 Pseudouridine synthase
10 10 1 2 SCOP 51316 Mss4-like
10 10 3 1 SCOP 56815 Sec1/munc18-like (SM) proteins
10 10 3 0 SCOP 46579 Prefoldin
10 8 6 0 SCOP 81901 HCP-like
10 10 2 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
10 10 2 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
10 10 3 0 SCOP 48619 Phospholipase A2, PLA2
10 10 3 1 SCOP 48225 Seven-hairpin glycosidases
10 10 6 1 SCOP 55060 GHMP Kinase, C-terminal domain
10 10 6 0 SCOP 57863 ArfGap/RecO-like zinc finger
10 10 2 1 SCOP 56366 SMAD MH1 domain
10 10 3 0 SCOP 48670 Transducin (heterotrimeric G protein), gamma chain
10 5 2 1 SCOP 82615 Polo-box domain
9 9 3 2 SCOP 53613 Ribokinase-like
9 9 1 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
9 9 6 2 SCOP 53137 Translational machinery components
9 9 6 1 SCOP 52218 Flavoproteins
9 9 2 2 SCOP 48557 L-aspartase-like
9 3 1 1 SCOP 51283 dUTPase-like
9 9 5 1 SCOP 54862 4Fe-4S ferredoxins
9 9 5 0 SCOP 54292 2Fe-2S ferredoxin-like
9 9 4 1 SCOP 102114 Radical SAM enzymes
9 9 1 1 SCOP 56655 Carbohydrate phosphatase
9 9 4 2 SCOP 51419 PLP-binding barrel
9 9 6 1 SCOP 88723 PIN domain-like
9 9 3 1 SCOP 54648 DLC
9 9 2 1 SCOP 56019 The spindle assembly checkpoint protein mad2
9 9 3 0 SCOP 53639 AraD/HMP-PK domain-like
9 9 4 1 SCOP 49329 Cu,Zn superoxide dismutase-like
9 9 6 1 SCOP 88713 Glycoside hydrolase/deacetylase
9 9 4 0 SCOP 144091 Rhomboid-like
9 9 2 0 SCOP 52091 SpoIIaa-like
9 9 5 0 SCOP 69322 Tricorn protease domain 2
9 9 4 1 SCOP 55186 ThrRS/AlaRS common domain
9 9 3 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
9 9 2 1 SCOP 52935 PK C-terminal domain-like
9 9 5 0 SCOP 46938 CRAL/TRIO N-terminal domain
9 9 3 1 SCOP 81271 TGS-like
9 9 3 1 SCOP 69000 FAD-dependent thiol oxidase
9 8 4 1 SCOP 89837 Doublecortin (DC)
9 5 3 1 SCOP 109905 Surp module (SWAP domain)
9 9 3 0 SCOP 55277 GYF domain
8 8 1 1 SCOP 103491 Preprotein translocase SecY subunit
8 4 1 1 SCOP 53784 Phosphofructokinase
8 8 2 1 SCOP 50324 Inorganic pyrophosphatase
8 8 3 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
8 8 2 1 SCOP 144122 Tim10-like
8 7 4 1 SCOP 49777 PEBP-like
8 3 3 0 SCOP 55008 HMA, heavy metal-associated domain
8 8 5 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
8 8 3 0 SCOP 55154 CYTH-like phosphatases
8 8 4 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
8 8 2 1 SCOP 51604 Enolase C-terminal domain-like
8 8 4 0 SCOP 49452 Starch-binding domain-like
8 8 2 0 SCOP 58026 Delta-sleep-inducing peptide immunoreactive peptide
8 5 3 0 SCOP 50965 Galactose oxidase, central domain
8 8 2 1 SCOP 54826 Enolase N-terminal domain-like
8 4 2 1 SCOP 55945 TATA-box binding protein-like
8 8 3 1 SCOP 56496 Fibrinogen C-terminal domain-like
8 8 1 0 SCOP 48431 Lipovitellin-phosvitin complex, superhelical domain
8 8 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
8 8 4 2 SCOP 49348 Clathrin adaptor appendage domain
8 4 3 1 SCOP 49742 PHM/PNGase F
8 8 4 0 SCOP 54277 CAD & PB1 domains
8 8 1 1 SCOP 48445 14-3-3 protein
8 7 6 0 SCOP 140741 RUN domain-like
8 8 1 0 SCOP 116907 Hook domain
8 8 2 1 SCOP 47454 A DNA-binding domain in eukaryotic transcription factors
8 7 3 0 SCOP 55666 Ribonuclease PH domain 2-like
8 8 6 0 SCOP 54556 Chitinase insertion domain
8 8 1 0 SCOP 140482 MAST3 pre-PK domain-like
7 7 2 0 SCOP 52080 Ribosomal proteins L15p and L18e
7 7 4 0 SCOP 51161 Trimeric LpxA-like enzymes
7 7 4 1 SCOP 50715 Ribosomal protein L25-like
7 7 1 1 SCOP 56796 Dehydroquinate synthase-like
7 7 3 1 SCOP 51069 Carbonic anhydrase
7 7 2 1 SCOP 111352 Ammonium transporter
7 7 1 0 SCOP 55331 Tautomerase/MIF
7 7 2 1 SCOP 50692 ADC-like
7 7 4 1 SCOP 53218 Molybdenum cofactor biosynthesis proteins
7 7 3 1 SCOP 54518 Tubby C-terminal domain-like
7 4 3 0 SCOP 69065 RNase III domain-like
7 7 2 1 SCOP 118215 Proton glutamate symport protein
7 7 4 1 SCOP 103025 Folate-binding domain
7 7 2 1 SCOP 56534 Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
7 7 5 0 SCOP 52200 Toll/Interleukin receptor TIR domain
7 6 4 1 SCOP 51971 Nucleotide-binding domain
7 5 4 0 SCOP 55658 L9 N-domain-like
7 7 3 1 SCOP 52210 Succinyl-CoA synthetase domains
7 7 2 0 SCOP 49363 Purple acid phosphatase, N-terminal domain
7 7 4 0 SCOP 68906 SAP domain
7 7 3 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
7 7 4 0 SCOP 50923 Hemopexin-like domain
7 7 2 1 SCOP 47874 Annexin
7 4 4 0 SCOP 57256 Elafin-like
7 7 3 1 SCOP 144074 E2F-DP heterodimerization region
7 7 3 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
7 4 4 0 SCOP 69179 Integrin domains
7 7 1 0 SCOP 54368 Glutamine synthetase, N-terminal domain
7 7 5 0 SCOP 75553 Smc hinge domain
7 7 3 1 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
7 7 2 1 SCOP 54585 Cdc48 domain 2-like
6 6 1 1 SCOP 53167 Purine and uridine phosphorylases
6 6 2 2 SCOP 47240 Ferritin-like
6 6 1 0 SCOP 52042 Ribosomal protein L32e
6 6 1 0 SCOP 54575 Ribosomal protein L31e
6 6 4 1 SCOP 56317 Carbon-nitrogen hydrolase
6 6 1 1 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
6 6 2 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
6 6 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
6 6 1 1 SCOP 55909 Pentein
6 5 5 1 SCOP 46955 Putative DNA-binding domain
6 3 2 0 SCOP 54909 Dimeric alpha+beta barrel
6 6 3 0 SCOP 50242 TIMP-like
6 6 6 2 SCOP 88697 PUA domain-like
6 6 2 0 SCOP 102462 Peptidyl-tRNA hydrolase II
6 2 2 0 SCOP 50199 Staphylococcal nuclease
6 4 2 1 SCOP 55979 DNA clamp
6 6 2 0 SCOP 160443 SMR domain-like
6 6 1 0 SCOP 48056 Di-copper centre-containing domain
6 6 1 1 SCOP 49870 Osmotin, thaumatin-like protein
6 3 2 0 SCOP 54810 GMP synthetase C-terminal dimerisation domain
6 6 1 0 SCOP 56973 Aerolisin/ETX pore-forming domain
6 6 2 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
6 5 5 0 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
6 6 2 0 SCOP 49410 Alpha-macroglobulin receptor domain
6 6 3 1 SCOP 46774 ARID-like
6 6 2 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
6 5 4 0 SCOP 117839 WWE domain
6 6 5 0 SCOP 57440 Kringle-like
6 6 3 1 SCOP 52025 PA domain
6 6 3 0 SCOP 63707 Ganglioside M2 (gm2) activator
6 6 2 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
6 2 2 0 SCOP 90193 Notch domain
5 5 2 2 SCOP 51366 Ribulose-phoshate binding barrel
5 5 2 0 SCOP 54999 Ribosomal protein S10
5 5 2 1 SCOP 50193 Ribosomal protein L14
5 5 1 1 SCOP 56047 Ribosomal protein S8
5 5 4 0 SCOP 52980 Restriction endonuclease-like
5 5 1 1 SCOP 56634 Heme-dependent catalase-like
5 5 2 2 SCOP 46626 Cytochrome c
5 5 2 1 SCOP 52499 Isochorismatase-like hydrolases
5 5 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
5 5 1 1 SCOP 54506 Diaminopimelate epimerase-like
5 5 5 1 SCOP 47819 HRDC-like
5 5 2 0 SCOP 47694 Cytochrome c oxidase subunit h
5 4 3 1 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
5 5 1 1 SCOP 52016 LeuD/IlvD-like
5 5 1 1 SCOP 53732 Aconitase iron-sulfur domain
5 2 2 0 SCOP 82153 FAS1 domain
5 5 1 0 SCOP 49472 Transthyretin (synonym: prealbumin)
5 5 1 1 SCOP 103196 Roadblock/LC7 domain
5 4 3 0 SCOP 47781 RuvA domain 2-like
5 5 4 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
5 5 2 0 SCOP 82704 AlbA-like
5 5 2 1 SCOP 54984 eEF-1beta-like
5 5 3 2 SCOP 46548 alpha-helical ferredoxin
5 5 2 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
5 5 2 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
5 5 3 0 SCOP 54403 Cystatin/monellin
5 5 2 0 SCOP 50405 Actin-crosslinking proteins
5 5 2 0 SCOP 49344 CBD9-like
5 5 3 3 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
5 5 4 1 SCOP 56719 Type II DNA topoisomerase
5 3 2 1 SCOP 142877 EndoU-like
5 5 2 0 SCOP 49464 Carboxypeptidase regulatory domain-like
5 5 3 0 SCOP 160059 PriA/YqbF domain
5 5 3 1 SCOP 140990 FtsH protease domain-like
5 5 2 0 SCOP 141673 MOSC N-terminal domain-like
5 5 2 1 SCOP 50621 Alanine racemase C-terminal domain-like
5 5 3 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
5 5 2 1 SCOP 56327 LDH C-terminal domain-like
5 5 2 1 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
5 4 3 0 SCOP 118310 AN1-like Zinc finger
5 5 2 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
5 5 2 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
5 5 3 1 SCOP 82708 R3H domain
5 5 4 0 SCOP 158573 GINS helical bundle-like
5 4 3 0 SCOP 57924 Inhibitor of apoptosis (IAP) repeat
5 5 2 0 SCOP 110004 Glycolipid transfer protein, GLTP
5 5 2 0 SCOP 63451 LEM domain
5 4 2 0 SCOP 50911 Mannose 6-phosphate receptor domain
5 5 3 0 SCOP 55149 Pepsin inhibitor-3
5 5 1 0 SCOP 161060 ATP synthase B chain-like
5 5 2 1 SCOP 89942 eEF1-gamma domain
5 5 1 0 SCOP 109775 Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
5 5 2 0 SCOP 48678 Moesin tail domain
5 5 2 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
5 5 5 0 SCOP 143575 GAS2 domain-like
5 5 2 0 SCOP 63763 SAND domain-like
5 5 1 0 SCOP 144270 Eferin C-derminal domain-like
5 5 3 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
5 5 3 0 SCOP 101238 XPC-binding domain
4 4 2 0 SCOP 46911 Ribosomal protein S18
4 4 2 1 SCOP 54686 Ribosomal protein L16p/L10e
4 2 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
4 4 4 1 SCOP 75217 alpha/beta knot
4 4 3 0 SCOP 48150 DNA-glycosylase
4 3 3 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
4 4 2 1 SCOP 52313 Ribosomal protein S2
4 4 1 1 SCOP 48140 Ribosomal protein L19 (L19e)
4 4 1 1 SCOP 57798 Casein kinase II beta subunit
4 4 1 1 SCOP 53774 Glutaminase/Asparaginase
4 4 2 0 SCOP 51306 LexA/Signal peptidase
4 4 2 1 SCOP 82282 Homocysteine S-methyltransferase
4 4 3 0 SCOP 53056 beta-carbonic anhydrase, cab
4 4 2 1 SCOP 56529 FAH
4 4 3 1 SCOP 56399 ADP-ribosylation
4 4 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
4 4 3 0 SCOP 55718 SCP-like
4 4 2 0 SCOP 102712 JAB1/MPN domain
4 4 1 0 SCOP 75712 Rad50 coiled-coil Zn hook
4 4 2 1 SCOP 110857 Gamma-glutamyl cyclotransferase-like
4 4 4 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
4 4 1 1 SCOP 47592 SWIB/MDM2 domain
4 4 1 1 SCOP 89124 Nop domain
4 4 3 0 SCOP 53092 Creatinase/prolidase N-terminal domain
4 4 2 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
4 4 1 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
4 4 3 1 SCOP 142921 WGR domain-like
4 4 2 0 SCOP 48019 post-AAA+ oligomerization domain-like
4 4 2 1 SCOP 52922 TK C-terminal domain-like
4 4 3 0 SCOP 81995 beta-sandwich domain of Sec23/24
4 4 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
4 4 3 0 SCOP 47090 PGBD-like
4 4 3 0 SCOP 48334 DNA repair protein MutS, domain III
4 4 2 1 SCOP 110019 ERO1-like
4 4 2 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
4 3 3 1 SCOP 56042 PurM C-terminal domain-like
4 3 3 1 SCOP 55326 PurM N-terminal domain-like
4 4 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
4 4 1 0 SCOP 57492 Trefoil
4 4 3 0 SCOP 47391 Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
4 4 4 1 SCOP 116846 MIT domain
4 4 1 0 SCOP 47672 Transferrin receptor-like dimerisation domain
4 4 2 0 SCOP 64602 F1 ATPase inhibitor, IF1, C-terminal domain
4 4 2 1 SCOP 88688 Families 57/38 glycoside transferase middle domain
4 2 2 0 SCOP 56487 SRCR-like
4 4 3 1 SCOP 101233 PWI domain
4 2 1 0 SCOP 46585 HR1 repeat
4 4 2 0 SCOP 81778 Crustacean CHH/MIH/GIH neurohormone
4 4 1 0 SCOP 57552 Blood coagulation inhibitor (disintegrin)
4 2 1 0 SCOP 57277 Granulin repeat
4 4 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
4 4 2 1 SCOP 101391 Hsp90 co-chaperone CDC37
4 4 1 0 SCOP 143503 PUG domain-like
4 2 1 0 SCOP 103637 CCHHC domain
4 4 1 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
4 3 2 0 SCOP 140383 BSD domain-like
4 4 2 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
4 4 1 0 SCOP 161256 RILP dimerisation region
4 4 3 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
3 3 3 0 SCOP 54843 Ribosomal protein L22
3 3 3 0 SCOP 110324 Ribosomal L27 protein-like
3 3 1 1 SCOP 75620 Release factor
3 3 1 0 SCOP 55174 Alpha-L RNA-binding motif
3 3 3 0 SCOP 160369 Ribosomal protein L10-like
3 3 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
3 3 1 0 SCOP 52161 Ribosomal protein L13
3 3 3 1 SCOP 51730 FAD-linked oxidoreductase
3 3 1 1 SCOP 55821 YrdC/RibB
3 3 1 0 SCOP 89360 HesB-like domain
3 3 1 1 SCOP 56770 HydA/Nqo6-like
3 3 2 1 SCOP 64005 Undecaprenyl diphosphate synthase
3 3 2 1 SCOP 55298 YjgF-like
3 3 1 0 SCOP 82657 BolA-like
3 3 3 0 SCOP 54060 His-Me finger endonucleases
3 3 2 1 SCOP 48576 Terpenoid synthases
3 3 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
3 3 2 1 SCOP 52949 Macro domain-like
3 3 2 1 SCOP 48256 Citrate synthase
3 3 2 0 SCOP 140718 Mediator hinge subcomplex-like
3 3 2 1 SCOP 53590 Nucleoside hydrolase
3 3 2 1 SCOP 48439 Protein prenylyltransferase
3 3 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
3 2 2 1 SCOP 69645 Arp2/3 complex subunits
3 3 2 1 SCOP 55781 GAF domain-like
3 3 1 0 SCOP 103486 V-type ATP synthase subunit C
3 3 3 1 SCOP 55159 eIF1-like
3 3 2 1 SCOP 143113 NAP-like
3 3 1 0 SCOP 55770 Profilin (actin-binding protein)
3 3 1 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
3 3 3 1 SCOP 50022 ISP domain
3 3 1 1 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
3 3 2 0 SCOP 50993 Peptidase/esterase 'gauge' domain
3 3 1 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
3 3 1 0 SCOP 160909 ATP12-like
3 3 2 0 SCOP 56747 Prim-pol domain
3 3 2 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
3 3 1 0 SCOP 57802 Rubredoxin-like
3 3 2 0 SCOP 55021 ACT-like
3 3 2 0 SCOP 64076 MTH938-like
3 3 2 0 SCOP 55136 Probable bacterial effector-binding domain
3 3 2 1 SCOP 50346 PRC-barrel domain
3 3 1 1 SCOP 69695 SRP19
3 3 2 1 SCOP 56003 Molybdenum cofactor-binding domain
3 3 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
3 3 3 1 SCOP 69318 Integrin alpha N-terminal domain
3 3 2 0 SCOP 69989 C-terminal domain of PLC-beta
3 3 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
3 3 3 0 SCOP 52075 Outer arm dynein light chain 1
3 3 2 0 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
3 3 1 1 SCOP 81891 Poly A polymerase C-terminal region-like
3 3 2 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
3 3 3 0 SCOP 117289 Nucleoporin domain
3 3 1 1 SCOP 101887 Apyrase
3 3 1 0 SCOP 47794 Rad51 N-terminal domain-like
3 3 2 1 SCOP 47741 CO dehydrogenase ISP C-domain like
3 3 2 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
3 3 3 0 SCOP 144284 Sec2 N-terminal region
3 3 2 0 SCOP 54991 Anticodon-binding domain of PheRS
3 3 1 0 SCOP 111357 Mitochondrial ATP synthase coupling factor 6
3 3 2 1 SCOP 50353 Cytokine
3 3 1 0 SCOP 81415 Mitochondrial cytochrome c oxidase subunit VIc
3 3 1 0 SCOP 118359 Expressed protein At2g23090/F21P24.15
3 3 3 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
3 3 3 0 SCOP 82671 SEA domain
3 3 1 1 SCOP 140984 PTPA-like
3 3 2 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
3 3 2 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
3 3 2 1 SCOP 47668 N-terminal domain of cbl (N-cbl)
3 3 1 0 SCOP 140102 ISY1 domain-like
3 3 2 1 SCOP 101288 L27 domain
3 3 1 1 SCOP 143875 ERH-like
3 3 3 0 SCOP 47050 VHP, Villin headpiece domain
3 3 2 0 SCOP 143791 DUSP-like
3 2 2 0 SCOP 57262 Leech antihemostatic proteins
3 3 2 1 SCOP 54511 GFP-like
3 3 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
3 3 3 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
3 3 1 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
3 3 2 0 SCOP 89000 post-HMGL domain-like
3 1 1 0 SCOP 110035 GDNF receptor-like
3 3 2 0 SCOP 47655 STAT
3 1 1 0 SCOP 47045 RAP domain-like
3 3 2 0 SCOP 140612 EB1 dimerisation domain-like
3 3 2 1 SCOP 63887 P-domain of calnexin/calreticulin
3 3 1 0 SCOP 160897 Taf5 N-terminal domain-like
3 3 1 1 SCOP 160219 AMPKBI-like
3 3 3 0 SCOP 158235 SOCS box-like
3 3 2 1 SCOP 81811 Helical domain of Sec23/24
3 3 2 0 SCOP 82919 Zn-finger domain of Sec23/24
2 2 1 1 SCOP 47973 Ribosomal protein S7
2 2 2 1 SCOP 52141 Uracil-DNA glycosylase-like
2 2 2 0 SCOP 89919 Ribosome-binding factor A, RbfA
2 2 2 1 SCOP 52166 Ribosomal protein L4
2 2 1 0 SCOP 54570 Ribosomal protein S19
2 2 1 1 SCOP 55282 RL5-like
2 2 2 2 SCOP 51658 Xylose isomerase-like
2 2 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
2 2 1 0 SCOP 53633 Carbamate kinase-like
2 2 1 0 SCOP 55194 Ribosome recycling factor, RRF
2 2 2 1 SCOP 51713 tRNA-guanine transglycosylase
2 2 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
2 2 1 0 SCOP 54285 MoaD/ThiS
2 2 1 1 SCOP 81452 Cytochrome c oxidase subunit III-like
2 2 1 0 SCOP 55129 Ribosomal protein L30p/L7e
2 2 1 1 SCOP 144217 CSL zinc finger
2 2 1 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
2 2 2 1 SCOP 53328 Formyltransferase
2 2 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 1 0 SCOP 159468 AtpF-like
2 2 2 0 SCOP 63393 RNA polymerase subunits
2 2 2 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 2 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
2 2 1 1 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
2 2 1 0 SCOP 51645 Malate synthase G
2 2 1 2 SCOP 52972 ITPase-like
2 2 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
2 2 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
2 2 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 1 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
2 2 1 0 SCOP 53800 Chelatase
2 2 1 1 SCOP 101546 ASF1-like
2 2 1 0 SCOP 69118 AhpD-like
2 2 2 0 SCOP 143243 Nqo5-like
2 2 1 1 SCOP 51998 PFL-like glycyl radical enzymes
2 2 2 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
2 2 1 1 SCOP 56349 DNA breaking-rejoining enzymes
2 2 2 0 SCOP 89550 PHP domain-like
2 2 2 1 SCOP 89733 L-sulfolactate dehydrogenase-like
2 2 1 1 SCOP 56762 HydB/Nqo4-like
2 2 2 0 SCOP 54736 ClpS-like
2 2 1 0 SCOP 109910 YgfY-like
2 2 2 1 SCOP 52335 Methylglyoxal synthase-like
2 2 2 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
2 2 1 1 SCOP 111326 Urocanase
2 2 1 0 SCOP 48695 Multiheme cytochromes
2 2 2 1 SCOP 111321 AF1104-like
2 2 1 0 SCOP 46589 tRNA-binding arm
2 2 2 0 SCOP 158832 Tex N-terminal region-like
2 2 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
2 2 2 0 SCOP 141255 YccV-like
2 1 1 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
2 2 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
2 2 2 0 SCOP 160481 BRK domain-like
2 2 1 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
2 2 2 1 SCOP 110111 Ctag/Cox11
2 2 2 0 SCOP 54171 DNA-binding domain
2 2 2 1 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
2 2 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
2 2 2 1 SCOP 63882 MoeA N-terminal region -like
2 2 1 1 SCOP 55637 Cell cycle regulatory proteins
2 2 1 0 SCOP 69979 Eea1 homodimerisation domain
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 2 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
2 2 2 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
2 2 1 0 SCOP 46596 Eukaryotic DNA topoisomerase I, dispensable insert domain
2 2 2 0 SCOP 160696 BTG domain-like
2 2 2 1 SCOP 55455 SRF-like
2 2 2 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
2 2 2 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
2 2 1 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
2 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
2 2 1 1 SCOP 110014 Her-1
2 2 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
2 2 2 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
2 2 1 0 SCOP 47762 PAH2 domain
2 2 2 0 SCOP 140111 Endosomal sorting complex assembly domain
2 2 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
2 2 1 0 SCOP 47157 Mitochondrial import receptor subunit Tom20
2 2 2 1 SCOP 50916 Rap30/74 interaction domains
2 2 1 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
2 2 1 1 SCOP 110217 DNA-binding protein LAG-1 (CSL)
2 2 1 0 SCOP 89811 Amyloid beta a4 protein copper binding domain (domain 2)
2 2 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
2 2 2 0 SCOP 68993 FAT domain of focal adhesion kinase
2 2 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
2 2 2 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
2 2 1 0 SCOP 56491 A heparin-binding domain
2 2 2 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
2 2 1 1 SCOP 109843 CAPPD, an extracellular domain of amyloid beta A4 protein
2 2 1 0 SCOP 140586 Dcp2 domain-like
2 2 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
2 2 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
2 2 1 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
2 2 2 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
2 2 2 0 SCOP 109880 A middle domain of Talin 1
2 2 2 0 SCOP 158230 PRP4-like
2 2 2 1 SCOP 158851 Lag-3 N-terminal region
1 1 1 1 SCOP 53790 Tetrapyrrole methylase
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 0 SCOP 46946 S13-like H2TH domain
1 1 1 0 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 74731 Ribosomal protein L20
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 1 SCOP 53597 Dihydrofolate reductase-like
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 143800 L28p-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 82549 DAK1/DegV-like
1 1 1 0 SCOP 75625 YebC-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 0 SCOP 101908 Putative isomerase YbhE
1 1 1 0 SCOP 55205 EPT/RTPC-like
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 1 SCOP 55387 Frataxin/Nqo15-like
1 1 1 1 SCOP 50475 FMN-binding split barrel
1 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 1 SCOP 69500 DTD-like
1 1 1 0 SCOP 103464 Oligosaccharyltransferase subunit ost4p
1 1 1 0 SCOP 142897 TFB5-like
1 1 1 0 SCOP 103456 Preprotein translocase SecE subunit
1 1 1 0 SCOP 81406 Mitochondrial cytochrome c oxidase subunit IV
1 1 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 55248 PCD-like
1 1 1 0 SCOP 144210 Nop10-like SnoRNP
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 0 SCOP 47072 Cysteine alpha-hairpin motif
1 1 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
1 1 1 0 SCOP 81427 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 1 SCOP 64153 YjeF N-terminal domain-like
1 1 1 1 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 0 SCOP 46988 Tubulin chaperone cofactor A
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 1 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
1 1 1 1 SCOP 81342 Transmembrane di-heme cytochromes
1 1 1 0 SCOP 81648 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 0 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 0 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 0 SCOP 82697 PurS-like
1 1 1 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 54447 ssDNA-binding transcriptional regulator domain
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 54913 GlnB-like
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 117856 AF0104/ALDC/Ptd012-like
1 1 1 1 SCOP 103365 Hypothetical protein PH1602
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 1 SCOP 82544 GckA/TtuD-like
1 1 1 0 SCOP 89028 Cobalamin adenosyltransferase-like
1 1 1 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 0 SCOP 110069 ApaG-like
1 1 1 0 SCOP 48295 TrpR-like
1 1 1 1 SCOP 110581 Indigoidine synthase A-like
1 1 1 0 SCOP 140931 Fic-like
1 1 1 1 SCOP 56507 Methionine synthase activation domain-like
1 1 1 1 SCOP 51703 Cobalamin (vitamin B12)-dependent enzymes
1 1 1 1 SCOP 101473 DhaL-like
1 1 1 0 SCOP 50486 FMT C-terminal domain-like
1 1 1 0 SCOP 69786 YggU-like
1 1 1 1 SCOP 110395 CutC-like
1 1 1 0 SCOP 56726 DNA topoisomerase IV, alpha subunit
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 0 SCOP 160350 Rnp2-like
1 1 1 0 SCOP 69819 MTH1598-like
1 1 1 1 SCOP 55287 RPB5-like RNA polymerase subunit
1 1 1 0 SCOP 143437 THUMP domain-like
1 1 1 0 SCOP 116820 Rps17e-like
1 1 1 0 SCOP 160374 RplX-like
1 1 1 0 SCOP 63867 MoeA C-terminal domain-like
1 1 1 1 SCOP 55895 Ribonuclease Rh-like
1 1 1 1 SCOP 82114 Riboflavin kinase-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 159034 Mib/herc2 domain-like
1 1 1 0 SCOP 49468 VHL
1 1 1 0 SCOP 52009 Phosphohistidine domain
1 1 1 0 SCOP 118116 DNA mismatch repair protein MutL
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 0 SCOP 144206 NOB1 zinc finger-like
1 1 1 0 SCOP 49842 TNF-like
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 0 SCOP 81853 Family 10 polysaccharide lyase
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
1 1 1 0 SCOP 81464 Cytochrome c oxidase subunit II-like, transmembrane region
1 1 1 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
1 1 1 1 SCOP 53920 Fe-only hydrogenase
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 1 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
1 1 1 0 SCOP 110836 Hypothetical protein SAV1430
1 1 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 55271 DNA repair protein MutS, domain I
1 1 1 0 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
1 1 1 1 SCOP 69761 GTP cyclohydrolase I feedback regulatory protein, GFRP
1 1 1 0 SCOP 81790 Myosin phosphatase inhibitor 17kDa protein, CPI-17
1 1 1 1 SCOP 89817 Mago nashi protein
1 1 1 1 SCOP 56854 Bcl-2 inhibitors of programmed cell death
1 1 1 0 SCOP 81518 Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 47798 Barrier-to-autointegration factor, BAF
1 1 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
1 1 1 0 SCOP 50723 Core binding factor beta, CBF
1 1 1 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
1 1 1 1 SCOP 143724 PHP14-like
1 1 1 0 SCOP 161065 ATP synthase D chain-like
1 1 1 0 SCOP 81730 beta-catenin-interacting protein ICAT
1 1 1 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 140864 TROVE domain-like
1 1 1 1 SCOP 47216 Proteasome activator
1 1 1 1 SCOP 63491 BAG domain
1 1 1 1 SCOP 48479 Cytochrome c oxidase subunit E
1 1 1 0 SCOP 90188 Somatomedin B domain
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 109925 Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
1 1 1 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
1 1 1 0 SCOP 57095 Scorpion toxin-like
1 1 1 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
1 1 1 0 SCOP 144292 occludin/ELL-like
1 1 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 0 SCOP 143885 RGC domain-like
1 1 1 0 SCOP 160527 V-type ATPase subunit E-like
1 1 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
1 1 1 0 SCOP 54416 Amine oxidase N-terminal region
1 1 1 1 SCOP 50989 Clathrin heavy-chain terminal domain
1 1 1 0 SCOP 46942 Elongation factor TFIIS domain 2
1 1 1 0 SCOP 140427 VPS28 C-terminal domain-like
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
1 1 1 1 SCOP 102031 AXH domain
1 1 1 1 SCOP 159042 Plus3-like
1 1 1 1 SCOP 88802 Pre-PUA domain
1 1 1 0 SCOP 140996 Hermes dimerisation domain
1 1 1 0 SCOP 69687 Integrin beta tail domain
1 1 1 0 SCOP 158553 TAFH domain-like
1 1 1 0 SCOP 161245 Zinc hairpin stack
1 1 1 0 SCOP 102860 mRNA decapping enzyme DcpS N-terminal domain
1 1 1 0 SCOP 64586 C-terminal domain of ProRS
1 1 1 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
1 1 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
1 1 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
1 1 1 0 SCOP 81502 ISP transmembrane anchor
1 1 1 0 SCOP 111479 Fzo-like conserved region
1 1 1 1 SCOP 47644 Methionine synthase domain
1 1 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 47802 DNA polymerase beta, N-terminal domain-like
1 1 1 1 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 140125 Rabenosyn-5 Rab-binding domain-like
1 1 1 0 SCOP 101283 GRIP domain
1 1 1 0 SCOP 111469 Geminin coiled-coil domain

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Zinc finger domain of DNA polymerase-alpha
SCOP superfamily Mollusk pheromone
SCOP superfamily DPY module
SCOP superfamily Inhibitor of vertebrate lysozyme, Ivy
SCOP superfamily RraA-like
SCOP superfamily Fucose-specific lectin
SCOP superfamily Gametocyte protein Pfg27
SCOP superfamily Soluble domain of poliovirus core protein 3a
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily Receptor-binding domain of short tail fibre protein gp12
SCOP superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors
SCOP superfamily Group I dsDNA viruses
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Apolipoprotein A-II
SCOP superfamily Replication modulator SeqA, C-terminal DNA-binding domain
SCOP superfamily GIY-YIG endonuclease
SCOP superfamily YbaB-like
SCOP superfamily Nuclease A inhibitor (NuiA)
SCOP superfamily Swiveling domain of dehydratase reactivase alpha subunit
SCOP superfamily Viral chemokine binding protein m3
SCOP superfamily BRCA2 tower domain
SCOP superfamily BRCA2 helical domain
SCOP superfamily RuBisCo LSMT C-terminal, substrate-binding domain
SCOP superfamily X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain
SCOP superfamily Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor
SCOP superfamily Nucleotidyltransferase substrate binding subunit/domain
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Photosystem I reaction center subunit XI, PsaL
SCOP superfamily Photosystem I subunits PsaA/PsaB
SCOP superfamily Bacterial photosystem II reaction centre, L and M subunits
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIa
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily Siroheme synthase middle domains-like
SCOP superfamily Rotavirus NSP2 fragment, N-terminal domain
SCOP superfamily YhbY-like
SCOP superfamily HprK N-terminal domain-like
SCOP superfamily Translin
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily TolA/TonB C-terminal domain
SCOP superfamily Colicin E3 receptor domain
SCOP superfamily Head and neck region of the ectodomain of NDV fusion glycoprotein
SCOP superfamily NSP3 homodimer
SCOP superfamily Thymidylate synthase-complementing protein Thy1
SCOP superfamily DNA-binding C-terminal domain of the transcription factor MotA
SCOP superfamily Cell wall binding repeat
SCOP superfamily Phage fibre proteins
SCOP superfamily Phage tail proteins
SCOP superfamily Glutamyl tRNA-reductase dimerization domain
SCOP superfamily 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
SCOP superfamily Hypothetical protein MTH865
SCOP superfamily RecG, N-terminal domain
SCOP superfamily Protein-L-isoaspartyl O-methyltransferase, C-terminal domain
SCOP superfamily Cellulose docking domain, dockering
SCOP superfamily Satiety factor CART (cocaine and amphetamine regulated transcript)
SCOP superfamily Phase 1 flagellin
SCOP superfamily DNA-binding domain of intron-encoded endonucleases
SCOP superfamily Cell-division protein ZipA, C-terminal domain
SCOP superfamily SirA-like
SCOP superfamily SurE-like
SCOP superfamily Cell-division inhibitor MinC, N-terminal domain
SCOP superfamily Precorrin-8X methylmutase CbiC/CobH
SCOP superfamily PTS-regulatory domain, PRD
SCOP superfamily MurE/MurF N-terminal domain
SCOP superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain
SCOP superfamily Bacterial hemolysins
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Virus ectodomain
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Multimerization domain of the phosphoprotein from sendai virus
SCOP superfamily Rotavirus nonstructural proteins
SCOP superfamily XRCC4, C-terminal oligomerization domain
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Trimerization domain of TRAF
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Hypothetical protein MTH1184
SCOP superfamily Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
SCOP superfamily HIV-1 VPU cytoplasmic domain
SCOP superfamily Heparin-binding domain from vascular endothelial growth factor
SCOP superfamily TNF receptor-like
SCOP superfamily Crisp domain-like
SCOP superfamily Bowman-Birk inhibitor, BBI
SCOP superfamily Plant lectins/antimicrobial peptides
SCOP superfamily Heat-stable enterotoxin B
SCOP superfamily Perfringolysin
SCOP superfamily Leukocidin-like
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Colicin
SCOP superfamily Upper collar protein gp10 (connector protein)
SCOP superfamily DNA primase core
SCOP superfamily Replication terminator protein (Tus)
SCOP superfamily Major capsid protein gp5
SCOP superfamily Baseplate structural protein gp11
SCOP superfamily Penicillin binding protein dimerisation domain
SCOP superfamily gp120 core
SCOP superfamily Peptide deformylase
SCOP superfamily Ribosome inactivating proteins (RIP)
SCOP superfamily N-acetylmuramoyl-L-alanine amidase-like
SCOP superfamily YbaK/ProRS associated domain
SCOP superfamily CytB endotoxin-like
SCOP superfamily Homing endonucleases
SCOP superfamily Subtilisin inhibitor
SCOP superfamily Copper amine oxidase, domain N
SCOP superfamily LigT-like
SCOP superfamily Nitrite/Sulfite reductase N-terminal domain-like
SCOP superfamily Formiminotransferase domain of formiminotransferase-cyclodeaminase.
SCOP superfamily CheY-binding domain of CheA
SCOP superfamily TRADD, N-terminal domain
SCOP superfamily Acylphosphatase/BLUF domain-like
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
SCOP superfamily RecA protein, C-terminal domain
SCOP superfamily Heme-binding protein A (HasA)
SCOP superfamily DNA-binding domain of Mlu1-box binding protein MBP1
SCOP superfamily Pili subunits
SCOP superfamily MHC antigen-recognition domain
SCOP superfamily Interleukin 8-like chemokines
SCOP superfamily Urease, gamma-subunit
SCOP superfamily RNase A-like
SCOP superfamily FucI/AraA N-terminal and middle domains
SCOP superfamily Methylated DNA-protein cysteine methyltransferase domain
SCOP superfamily DNA repair protein MutS, domain II
SCOP superfamily Resolvase-like
SCOP superfamily Cryptochrome/photolyase, N-terminal domain
SCOP superfamily E2 regulatory, transactivation domain
SCOP superfamily An insect antifreeze protein
SCOP superfamily Insect cysteine-rich antifreeze protein
SCOP superfamily beta-Roll
SCOP superfamily alpha-D-mannose-specific plant lectins
SCOP superfamily delta-Endotoxin (insectocide), middle domain
SCOP superfamily C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
SCOP superfamily Nitrous oxide reductase, N-terminal domain
SCOP superfamily TolB, C-terminal domain
SCOP superfamily Sialidases
SCOP superfamily Myosin S1 fragment, N-terminal domain
SCOP superfamily Baculovirus p35 protein
SCOP superfamily Virus attachment protein globular domain
SCOP superfamily Viral protein domain
SCOP superfamily Neurophysin II
SCOP superfamily Cna protein B-type domain
SCOP superfamily Bacterial adhesins
SCOP superfamily Carbohydrate-binding domain
SCOP superfamily Transglutaminase, two C-terminal domains
SCOP superfamily Fungal elicitin
SCOP superfamily Heme oxygenase-like
SCOP superfamily Peridinin-chlorophyll protein
SCOP superfamily Chorismate mutase II
SCOP superfamily Serum albumin-like
SCOP superfamily Phospholipase C/P1 nuclease
SCOP superfamily Tetracyclin repressor-like, C-terminal domain
SCOP superfamily gene 59 helicase assembly protein
SCOP superfamily Lipoxigenase
SCOP superfamily Aldehyde ferredoxin oxidoreductase, C-terminal domains
SCOP superfamily Cryptochrome/photolyase FAD-binding domain
SCOP superfamily Transcription factor STAT-4 N-domain
SCOP superfamily Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
SCOP superfamily Hemocyanin, N-terminal domain
SCOP superfamily Scaffolding protein gpD of bacteriophage procapsid
SCOP superfamily NusB-like
SCOP superfamily Retrovirus capsid protein, N-terminal core domain
SCOP superfamily ERP29 C domain-like
SCOP superfamily Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
SCOP superfamily Apolipophorin-III
SCOP superfamily Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily Retrovirus capsid dimerization domain-like
SCOP superfamily 4-helical cytokines
SCOP superfamily Histidine-containing phosphotransfer domain, HPT domain
SCOP superfamily Aspartate receptor, ligand-binding domain
SCOP superfamily Apolipoprotein
SCOP superfamily Diol dehydratase, gamma subunit
SCOP superfamily Fertilization protein
SCOP superfamily Enzyme IIa from lactose specific PTS, IIa-lac
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily C-terminal UvrC-binding domain of UvrB
SCOP superfamily DNA polymerase III theta subunit-like
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily CHY zinc finger-like
SCOP superfamily YfgJ-like
SCOP superfamily MetI-like
SCOP superfamily MAPEG domain-like
SCOP superfamily Photosystem II antenna protein-like
SCOP superfamily Cytochrome b559 subunits
SCOP superfamily Photosystem II reaction center protein J, PsbJ
SCOP superfamily flu NP-like
SCOP superfamily CV3147-like
SCOP superfamily SSO1389-like
SCOP superfamily PH0156-like
SCOP superfamily Api92-like
SCOP superfamily FlhC-like
SCOP superfamily PSTPO5379-like
SCOP superfamily Lp2179-like
SCOP superfamily YehR-like
SCOP superfamily FLJ32549 C-terminal domain-like
SCOP superfamily BT0923-like
SCOP superfamily NMB0513-like
SCOP superfamily BLRF2-like
SCOP superfamily YdfO-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily NMB0488-like
SCOP superfamily MM3350-like
SCOP superfamily YgaC/TfoX-N like
SCOP superfamily EreA/ChaN-like
SCOP superfamily SO1590-like
SCOP superfamily HIN-2000 domain-like
SCOP superfamily YopX-like
SCOP superfamily WSSV envelope protein-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily AGR C 984p-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily LanC-like
SCOP superfamily PSPTO4464-like
SCOP superfamily Sama2622-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily FLJ32549 domain-like
SCOP superfamily IVS-encoded protein-like
SCOP superfamily Ta0600-like
SCOP superfamily HP0062-like
SCOP superfamily TM1646-like
SCOP superfamily AF1782-like
SCOP superfamily Heterotrimerisation domain of extracellular hemoglobin linker subunits
SCOP superfamily MPN010-like
SCOP superfamily TSP9-like
SCOP superfamily Heme iron utilization protein-like
SCOP superfamily L,D-transpeptidase pre-catalytic domain-like
SCOP superfamily SARS receptor-binding domain-like
SCOP superfamily TM1622-like
SCOP superfamily TTP0101/SSO1404-like
SCOP superfamily Transposase IS200-like
SCOP superfamily Rv2632c-like
SCOP superfamily Coronavirus NSP8-like
SCOP superfamily L35p-like
SCOP superfamily YjbR-like
SCOP superfamily PhtA domain-like
SCOP superfamily YgbK-like
SCOP superfamily NadA-like
SCOP superfamily EAL domain-like
SCOP superfamily FimD N-terminal domain-like
SCOP superfamily Bacteriophage trimeric proteins domain
SCOP superfamily At5g01610-like
SCOP superfamily PTSIIA/GutA-like
SCOP superfamily L,D-transpeptidase catalytic domain-like
SCOP superfamily YdhA-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily Pseudo ankyrin repeat-like
SCOP superfamily USP8 N-terminal domain-like
SCOP superfamily Rhabdovirus nucleoprotein-like
SCOP superfamily YidB-like
SCOP superfamily IpaD-like
SCOP superfamily SP0561-like
SCOP superfamily HIV integrase-binding domain
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily FlgN-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily ChaB-like
SCOP superfamily Calcyclin-binding protein-like
SCOP superfamily Synuclein
SCOP superfamily Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain
SCOP superfamily HSP33 redox switch-like
SCOP superfamily WRKY DNA-binding domain
SCOP superfamily Connexin43
SCOP superfamily Viral ssDNA binding protein
SCOP superfamily Phosphoprotein M1, C-terminal domain
SCOP superfamily YehU-like
SCOP superfamily YbjQ-like
SCOP superfamily TM1631-like
SCOP superfamily Flagellar hook protein flgE
SCOP superfamily Beta-galactosidase LacA, domain 3
SCOP superfamily DNA primase DnaG, C-terminal domain
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily RNA-binding protein She2p
SCOP superfamily EspA/CesA-like
SCOP superfamily Avirulence protein AvrPto
SCOP superfamily XseB-like
SCOP superfamily DNA methylase specificity domain
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Pollen allergen ole e 6
SCOP superfamily OmpH-like
SCOP superfamily VP4 membrane interaction domain
SCOP superfamily Tsx-like channel
SCOP superfamily QueA-like
SCOP superfamily Recombination protein RecR
SCOP superfamily Hemolytic lectin CEL-III, C-terminal domain
SCOP superfamily YggX-like
SCOP superfamily Hut operon positive regulatory protein HutP
SCOP superfamily 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
SCOP superfamily TmoB-like
SCOP superfamily AbfB domain
SCOP superfamily DinB/YfiT-like putative metalloenzymes
SCOP superfamily Domain from hypothetical 2610208m17rik protein
SCOP superfamily PhoU-like
SCOP superfamily Alpha-hemoglobin stabilizing protein AHSP
SCOP superfamily HBS1-like domain
SCOP superfamily DEK C-terminal domain
SCOP superfamily KorB DNA-binding domain-like
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily G protein-binding domain
SCOP superfamily TSP type-3 repeat
SCOP superfamily SBT domain
SCOP superfamily Bubble protein
SCOP superfamily Autotransporter
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
SCOP superfamily Virulence-associated V antigen
SCOP superfamily 2-methylcitrate dehydratase PrpD
SCOP superfamily Chorismate synthase, AroC
SCOP superfamily Holliday junction resolvase RusA
SCOP superfamily Hypothetical protein YwqG
SCOP superfamily Hypothetical protein TT1725
SCOP superfamily Hypothetical protein Ta1206
SCOP superfamily Coproporphyrinogen III oxidase
SCOP superfamily Chromosomal protein MC1
SCOP superfamily Cell division protein ZapA-like
SCOP superfamily NIF3 (NGG1p interacting factor 3)-like
SCOP superfamily Alpha-2,3/8-sialyltransferase CstII
SCOP superfamily Putative cyclase
SCOP superfamily Trimeric adhesin
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily Stabilizer of iron transporter SufD
SCOP superfamily Hypothetical protein YgiW
SCOP superfamily Smp-1-like
SCOP superfamily Dextranase, N-terminal domain
SCOP superfamily Anti-sigma factor FlgM
SCOP superfamily Stathmin
SCOP superfamily ADP-ribosylglycohydrolase
SCOP superfamily C-terminal domain of Ku80
SCOP superfamily Docking domain B of the erythromycin polyketide synthase (DEBS)
SCOP superfamily Flagellar export chaperone FliS
SCOP superfamily Oxygen-evolving enhancer protein 3,
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily Chemosensory protein Csp2

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.