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  Home > Genomes > Superfamily assignments for Solanum tuberosum


Solanum tuberosum superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum tuberosum

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Fasta format sequences
Domain assignments

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Assignment statistics

Sequences: 56218 total
27976 (50 %) with assignment
301 average length
42 % amino acid coverage
Domains: 37103 total
940 unique superfamilies
758 unique families
253 average length
39.5 average superfamily size
97 % formed by duplication
Domain combinations: 911 domain pairs
3680 unique architectures

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Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
2116 1935 211 12 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
1999 1981 141 3 SCOP 56112 Protein kinase-like (PK-like)
1469 1169 159 2 SCOP 52058 L domain-like
830 770 91 2 SCOP 57850 RING/U-box
690 677 9 1 SCOP 48264 Cytochrome P450
676 510 65 1 SCOP 54928 RNA-binding domain, RBD
660 649 52 9 SCOP 51735 NAD(P)-binding Rossmann-fold domains
644 644 49 0 SCOP 81383 F-box domain
641 582 97 0 SCOP 52047 RNI-like
608 600 13 7 SCOP 53474 alpha/beta-Hydrolases
584 478 57 1 SCOP 48452 TPR-like
568 532 44 2 SCOP 46689 Homeodomain-like
521 511 10 5 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
480 428 25 12 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
478 456 7 0 SCOP 103473 MFS general substrate transporter
446 403 49 7 SCOP 48371 ARM repeat
397 393 15 3 SCOP 51197 Clavaminate synthase-like
389 362 44 1 SCOP 50978 WD40 repeat-like
383 344 38 5 SCOP 52833 Thioredoxin-like
322 319 32 8 SCOP 51445 (Trans)glycosidases
313 273 16 1 SCOP 54171 DNA-binding domain
288 153 14 3 SCOP 49503 Cupredoxins
285 277 53 3 SCOP 46785 "Winged helix" DNA-binding domain
258 207 27 0 SCOP 57667 beta-beta-alpha zinc fingers
256 252 31 1 SCOP 47473 EF-hand
255 210 53 5 SCOP 50249 Nucleic acid-binding proteins
251 249 34 4 SCOP 53098 Ribonuclease H-like
245 244 32 8 SCOP 56784 HAD-like
245 214 20 2 SCOP 55961 Bet v1-like
241 206 31 5 SCOP 51905 FAD/NAD(P)-binding domain
229 229 8 0 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
226 171 21 1 SCOP 101936 DNA-binding pseudobarrel domain
218 162 41 3 SCOP 54236 Ubiquitin-like
218 142 29 1 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
216 125 23 4 SCOP 53067 Actin-like ATPase domain
212 209 9 3 SCOP 51126 Pectin lyase-like
210 207 11 5 SCOP 53383 PLP-dependent transferases
205 205 21 7 SCOP 54001 Cysteine proteinases
204 202 15 5 SCOP 53448 Nucleotide-diphospho-sugar transferases
200 150 12 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
194 160 30 0 SCOP 57756 Retrovirus zinc finger-like domains
193 188 35 1 SCOP 48403 Ankyrin repeat
189 92 32 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
189 189 3 0 SCOP 55455 SRF-like
183 183 5 1 SCOP 81606 PP2C-like
179 148 22 0 SCOP 81901 HCP-like
172 105 12 1 SCOP 47954 Cyclin-like
169 167 6 1 SCOP 48113 Heme-dependent peroxidases
168 85 25 0 SCOP 90229 CCCH zinc finger
163 161 10 1 SCOP 50630 Acid proteases
159 155 28 0 SCOP 54695 POZ domain
155 106 15 0 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
154 154 27 1 SCOP 46565 Chaperone J-domain
153 130 7 1 SCOP 118290 WRKY DNA-binding domain
149 149 5 2 SCOP 47113 Histone-fold
149 135 16 0 SCOP 51110 alpha-D-mannose-specific plant lectins
145 144 5 1 SCOP 47699 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
144 143 4 1 SCOP 101941 NAC domain
141 135 8 6 SCOP 51182 RmlC-like cupins
138 138 14 3 SCOP 49899 Concanavalin A-like lectins/glucanases
136 126 42 1 SCOP 57903 FYVE/PHD zinc finger
135 135 9 3 SCOP 48576 Terpenoid synthases
134 77 6 2 SCOP 53901 Thiolase-like
124 118 6 1 SCOP 103506 Mitochondrial carrier
120 99 11 3 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
116 94 9 1 SCOP 50129 GroES-like
114 83 21 2 SCOP 49785 Galactose-binding domain-like
114 113 7 1 SCOP 101148 Plant invertase/pectin methylesterase inhibitor
113 113 17 0 SCOP 54277 CAD & PB1 domains
112 69 13 1 SCOP 90123 ABC transporter transmembrane region
111 111 4 1 SCOP 52266 SGNH hydrolase
111 110 14 1 SCOP 52743 Subtilisin-like
108 107 10 1 SCOP 47616 GST C-terminal domain-like
104 99 12 4 SCOP 52096 ClpP/crotonase
104 104 28 0 SCOP 52200 Toll/Interleukin receptor TIR domain
103 102 10 2 SCOP 54495 UBC-like
97 59 29 1 SCOP 55021 ACT-like
96 96 12 4 SCOP 56300 Metallo-dependent phosphatases
94 94 21 3 SCOP 52402 Adenine nucleotide alpha hydrolases-like
94 63 16 1 SCOP 54534 FKBP-like
94 88 14 2 SCOP 56219 DNase I-like
94 94 5 0 SCOP 57959 Leucine zipper domain
90 87 15 1 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
89 89 15 2 SCOP 82199 SET domain
88 83 15 1 SCOP 117281 Kelch motif
85 78 32 8 SCOP 54211 Ribosomal protein S5 domain 2-like
85 72 10 0 SCOP 55008 HMA, heavy metal-associated domain
82 66 15 1 SCOP 49599 TRAF domain-like
80 80 7 3 SCOP 49764 HSP20-like chaperones
80 80 13 4 SCOP 56672 DNA/RNA polymerases
79 79 12 1 SCOP 52087 CRAL/TRIO domain
78 61 21 0 SCOP 54631 CBS-domain pair
77 74 5 2 SCOP 50685 Barwin-like endoglucanases
77 75 14 1 SCOP 52172 CheY-like
76 40 9 0 SCOP 75471 YhbY-like
76 76 9 0 SCOP 50965 Galactose oxidase, central domain
75 75 5 1 SCOP 56801 Acetyl-CoA synthetase-like
71 67 17 2 SCOP 50447 Translation proteins
71 44 10 0 SCOP 54403 Cystatin/monellin
70 70 6 2 SCOP 48208 Six-hairpin glycosidases
69 66 7 2 SCOP 53254 Phosphoglycerate mutase-like
68 68 18 3 SCOP 50729 PH domain-like
67 67 9 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
65 65 3 1 SCOP 81338 Aquaporin-like
65 33 11 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
62 62 6 1 SCOP 55811 Nudix
62 59 4 1 SCOP 103511 Chlorophyll a-b binding protein
62 61 17 1 SCOP 81665 Calcium ATPase, transmembrane domain M
62 37 5 0 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
62 40 18 0 SCOP 57889 Cysteine-rich domain
61 54 23 0 SCOP 46934 UBA-like
60 43 11 6 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
60 56 13 0 SCOP 58038 SNARE fusion complex
60 60 21 3 SCOP 81296 E set domains
59 54 6 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
59 59 8 1 SCOP 54427 NTF2-like
59 59 24 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
59 31 15 0 SCOP 90209 Ran binding protein zinc finger-like
57 56 11 3 SCOP 64356 SNARE-like
57 57 11 1 SCOP 56176 FAD-binding/transporter-associated domain-like
57 57 8 0 SCOP 46938 CRAL/TRIO N-terminal domain
56 48 10 3 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
55 47 11 0 SCOP 81324 Voltage-gated potassium channels
54 49 12 2 SCOP 51695 PLC-like phosphodiesterases
54 47 12 0 SCOP 50985 RCC1/BLIP-II
54 54 11 1 SCOP 51206 cAMP-binding domain-like
53 53 3 1 SCOP 51430 NAD(P)-linked oxidoreductase
53 53 7 2 SCOP 54518 Tubby C-terminal domain-like
52 52 10 4 SCOP 51569 Aldolase
50 50 4 1 SCOP 50182 Sm-like ribonucleoproteins
50 50 13 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
50 31 11 1 SCOP 55785 PYP-like sensor domain (PAS domain)
50 50 6 1 SCOP 74788 Cullin repeat-like
48 48 20 2 SCOP 55681 Class II aaRS and biotin synthetases
48 45 4 1 SCOP 49590 PHL pollen allergen
47 47 4 1 SCOP 51395 FMN-linked oxidoreductases
47 34 6 0 SCOP 82153 FAS1 domain
46 40 15 2 SCOP 52317 Class I glutamine amidotransferase-like
46 40 13 1 SCOP 47095 HMG-box
46 46 11 1 SCOP 50891 Cyclophilin-like
45 45 5 2 SCOP 53613 Ribokinase-like
45 44 4 0 SCOP 117856 AF0104/ALDC/Ptd012-like
45 45 11 1 SCOP 52025 PA domain
44 44 6 2 SCOP 53137 Translational machinery components
44 33 18 0 SCOP 54768 dsRNA-binding domain-like
43 43 5 1 SCOP 53720 ALDH-like
43 32 5 2 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
43 26 12 1 SCOP 56024 Phospholipase D/nuclease
43 43 12 1 SCOP 81653 Calcium ATPase, transduction domain A
42 39 12 4 SCOP 52374 Nucleotidylyl transferase
42 42 6 1 SCOP 47661 t-snare proteins
41 41 11 1 SCOP 53850 Periplasmic binding protein-like II
41 41 13 3 SCOP 53187 Zn-dependent exopeptidases
41 40 10 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
40 37 19 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
40 40 7 3 SCOP 55120 Pseudouridine synthase
40 36 12 3 SCOP 51161 Trimeric LpxA-like enzymes
40 40 4 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
40 40 9 2 SCOP 74650 Galactose mutarotase-like
40 40 18 1 SCOP 53300 vWA-like
40 16 12 0 SCOP 47762 PAH2 domain
39 39 15 3 SCOP 88697 PUA domain-like
39 38 9 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
39 38 10 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
39 39 4 1 SCOP 81382 Skp1 dimerisation domain-like
38 38 11 6 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
38 38 7 0 SCOP 53822 Periplasmic binding protein-like I
38 38 12 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
38 37 5 1 SCOP 49870 Osmotin, thaumatin-like protein
37 23 8 2 SCOP 55753 Actin depolymerizing proteins
37 37 3 1 SCOP 48484 Lipoxigenase
37 37 2 1 SCOP 141562 At5g01610-like
36 36 8 1 SCOP 50104 Translation proteins SH3-like domain
36 36 8 2 SCOP 55315 L30e-like
36 36 15 2 SCOP 52029 GroEL apical domain-like
36 36 7 2 SCOP 54373 FAD-linked reductases, C-terminal domain
36 36 2 1 SCOP 50386 STI-like
35 35 5 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
35 20 8 0 SCOP 88659 Sigma3 and sigma4 domains of RNA polymerase sigma factors
35 35 14 1 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
35 24 7 1 SCOP 51101 Mannose-binding lectins
35 26 12 0 SCOP 52113 BRCT domain
35 35 6 1 SCOP 48464 ENTH/VHS domain
34 33 8 1 SCOP 52490 Tubulin nucleotide-binding domain-like
34 33 15 3 SCOP 63380 Riboflavin synthase domain-like
33 33 5 0 SCOP 57829 Zn-binding ribosomal proteins
33 33 18 3 SCOP 81301 Nucleotidyltransferase
33 33 10 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
32 32 7 3 SCOP 100950 NagB/RpiA/CoA transferase-like
32 32 11 2 SCOP 109604 HD-domain/PDEase-like
32 32 7 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
32 31 12 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
32 31 14 0 SCOP 50156 PDZ domain-like
32 32 9 1 SCOP 51011 Glycosyl hydrolase domain
32 32 5 1 SCOP 55307 Tubulin C-terminal domain-like
32 23 8 0 SCOP 57016 Plant lectins/antimicrobial peptides
32 32 5 1 SCOP 103612 SBT domain
31 31 6 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
31 31 4 1 SCOP 52279 Beta-D-glucan exohydrolase, C-terminal domain
31 31 3 0 SCOP 47370 Bromodomain
30 29 6 3 SCOP 48150 DNA-glycosylase
30 29 6 0 SCOP 63829 Calcium-dependent phosphotriesterase
30 28 8 0 SCOP 57997 Tropomyosin
30 30 6 2 SCOP 52151 FabD/lysophospholipase-like
30 27 10 1 SCOP 50494 Trypsin-like serine proteases
30 30 8 1 SCOP 52777 CoA-dependent acyltransferases
30 30 3 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
29 29 6 5 SCOP 51556 Metallo-dependent hydrolases
29 29 6 1 SCOP 54292 2Fe-2S ferredoxin-like
29 29 2 1 SCOP 56655 Carbohydrate phosphatase
29 21 8 1 SCOP 55781 GAF domain-like
29 26 6 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
29 28 3 1 SCOP 55724 Mog1p/PsbP-like
29 14 8 1 SCOP 63411 LuxS/MPP-like metallohydrolase
29 25 12 1 SCOP 47592 SWIB/MDM2 domain
29 29 9 3 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
29 29 9 0 SCOP 57863 ArfGap/RecO-like zinc finger
29 29 5 1 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
29 26 10 0 SCOP 54849 GroEL-intermediate domain like
28 28 4 1 SCOP 75304 Amidase signature (AS) enzymes
28 28 10 1 SCOP 55920 Creatinase/aminopeptidase
28 28 1 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
28 28 9 1 SCOP 56399 ADP-ribosylation
28 28 10 1 SCOP 48592 GroEL equatorial domain-like
28 28 6 0 SCOP 49354 PapD-like
27 27 3 0 SCOP 117892 Band 7/SPFH domain
27 21 5 1 SCOP 100897 Plant proteinase inhibitors
27 14 3 1 SCOP 54416 Amine oxidase N-terminal region
26 26 4 5 SCOP 51366 Ribulose-phoshate binding barrel
26 23 9 2 SCOP 53633 Carbamate kinase-like
26 26 4 1 SCOP 64005 Undecaprenyl diphosphate synthase
26 26 9 1 SCOP 47576 Calponin-homology domain, CH-domain
26 26 3 1 SCOP 55797 PR-1-like
26 24 3 1 SCOP 117070 LEA14-like
26 26 4 1 SCOP 55895 Ribonuclease Rh-like
26 26 7 1 SCOP 140990 FtsH protease domain-like
26 26 6 1 SCOP 49363 Purple acid phosphatase, N-terminal domain
26 24 8 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
26 25 5 1 SCOP 56204 Hect, E3 ligase catalytic domain
25 24 8 3 SCOP 52821 Rhodanese/Cell cycle control phosphatase
25 22 8 0 SCOP 118310 AN1-like Zinc finger
24 22 7 2 SCOP 53271 PRTase-like
24 24 8 0 SCOP 103657 BAR/IMD domain-like
24 24 12 2 SCOP 56104 SAICAR synthase-like
24 23 8 0 SCOP 57783 Zinc beta-ribbon
24 20 11 0 SCOP 69065 RNase III domain-like
24 23 6 1 SCOP 75005 Arabinanase/levansucrase/invertase
24 16 9 0 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
24 24 10 0 SCOP 63748 Tudor/PWWP/MBT
23 23 9 4 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
23 23 6 0 SCOP 161111 Cation efflux protein transmembrane domain-like
23 23 10 0 SCOP 47384 Homodimeric domain of signal transducing histidine kinase
22 22 9 2 SCOP 52218 Flavoproteins
22 22 6 0 SCOP 144091 Rhomboid-like
22 22 9 1 SCOP 49879 SMAD/FHA domain
22 22 13 0 SCOP 82171 DPP6 N-terminal domain-like
22 12 6 1 SCOP 54980 EF-G C-terminal domain-like
22 16 4 0 SCOP 50405 Actin-crosslinking proteins
22 19 10 0 SCOP 54160 Chromo domain-like
21 19 4 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
21 21 7 1 SCOP 51230 Single hybrid motif
21 20 5 1 SCOP 53955 Lysozyme-like
21 21 3 1 SCOP 82704 AlbA-like
21 21 4 1 SCOP 55031 Bacterial exopeptidase dimerisation domain
20 20 3 2 SCOP 47240 Ferritin-like
20 19 3 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
20 20 6 1 SCOP 56317 Carbon-nitrogen hydrolase
20 14 6 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
20 15 7 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
20 20 9 1 SCOP 81631 PAP/OAS1 substrate-binding domain
20 20 7 0 SCOP 57196 EGF/Laminin
20 20 3 0 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
20 20 4 0 SCOP 89009 GAT-like domain
19 18 6 2 SCOP 53927 Cytidine deaminase-like
19 18 6 1 SCOP 75217 alpha/beta knot
19 18 7 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
19 19 8 0 SCOP 81923 Double Clp-N motif
19 18 6 0 SCOP 54106 LysM domain
19 19 5 0 SCOP 144074 E2F-DP heterodimerization region
18 18 3 1 SCOP 53784 Phosphofructokinase
18 18 5 1 SCOP 50475 FMN-binding split barrel
18 16 5 1 SCOP 53590 Nucleoside hydrolase
18 18 3 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
18 18 11 1 SCOP 52954 Class II aaRS ABD-related
18 18 3 0 SCOP 52091 SpoIIaa-like
18 18 4 2 SCOP 52922 TK C-terminal domain-like
18 6 1 1 SCOP 55973 S-adenosylmethionine synthetase
18 18 8 1 SCOP 55060 GHMP Kinase, C-terminal domain
18 18 7 1 SCOP 101690 PAZ domain
18 18 1 0 SCOP 57095 Scorpion toxin-like
17 16 5 0 SCOP 88946 Sigma2 domain of RNA polymerase sigma factors
17 16 3 0 SCOP 54654 CI-2 family of serine protease inhibitors
17 17 1 1 SCOP 56327 LDH C-terminal domain-like
17 6 5 0 SCOP 53738 Phosphoglucomutase, first 3 domains
17 17 2 1 SCOP 48445 14-3-3 protein
17 17 4 0 SCOP 47769 SAM/Pointed domain
17 12 4 0 SCOP 109905 Surp module (SWAP domain)
17 13 6 0 SCOP 55666 Ribonuclease PH domain 2-like
17 17 3 1 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
16 14 4 2 SCOP 54197 HIT-like
16 16 3 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
16 16 3 0 SCOP 53649 Alkaline phosphatase-like
16 16 3 1 SCOP 102405 MCP/YpsA-like
16 14 7 0 SCOP 47781 RuvA domain 2-like
16 16 5 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
16 16 3 1 SCOP 49998 Amine oxidase catalytic domain
16 16 3 0 SCOP 160219 AMPKBI-like
15 15 3 1 SCOP 50193 Ribosomal protein L14
15 15 2 2 SCOP 51316 Mss4-like
15 15 4 2 SCOP 102114 Radical SAM enzymes
15 14 6 2 SCOP 51419 PLP-binding barrel
15 15 7 0 SCOP 88723 PIN domain-like
15 15 4 0 SCOP 144000 Oxysterol-binding protein-like
15 15 2 1 SCOP 143113 NAP-like
15 15 6 2 SCOP 55931 Glutamine synthetase/guanido kinase
15 15 7 1 SCOP 50022 ISP domain
15 15 6 1 SCOP 81340 Clc chloride channel
15 15 5 0 SCOP 50800 PK beta-barrel domain-like
15 15 4 1 SCOP 53732 Aconitase iron-sulfur domain
15 15 8 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
15 15 4 1 SCOP 55103 FAD-linked oxidases, C-terminal domain
15 15 6 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
15 15 6 0 SCOP 46774 ARID-like
15 15 6 0 SCOP 47895 Transducin (alpha subunit), insertion domain
15 12 5 0 SCOP 51045 WW domain
15 15 4 0 SCOP 140111 Endosomal sorting complex assembly domain
15 15 7 0 SCOP 159042 Plus3-like
14 14 9 0 SCOP 54862 4Fe-4S ferredoxins
14 12 3 1 SCOP 56815 Sec1/munc18-like (SM) proteins
14 14 6 0 SCOP 161219 CHY zinc finger-like
14 14 4 1 SCOP 52768 Arginase/deacetylase
14 12 5 1 SCOP 50814 Lipocalins
14 12 3 0 SCOP 55136 Probable bacterial effector-binding domain
14 14 3 1 SCOP 56003 Molybdenum cofactor-binding domain
14 12 9 2 SCOP 52440 PreATP-grasp domain
14 14 10 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
14 14 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
14 14 6 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
13 10 3 0 SCOP 54843 Ribosomal protein L22
13 13 7 1 SCOP 55174 Alpha-L RNA-binding motif
13 7 2 0 SCOP 81333 F1F0 ATP synthase subunit C
13 13 4 2 SCOP 48557 L-aspartase-like
13 13 2 0 SCOP 46579 Prefoldin
13 13 3 0 SCOP 51306 LexA/Signal peptidase
13 13 1 2 SCOP 52972 ITPase-like
13 13 3 0 SCOP 47072 Cysteine alpha-hairpin motif
13 13 5 1 SCOP 55159 eIF1-like
13 13 3 1 SCOP 64167 SurE-like
13 13 6 3 SCOP 52467 DHS-like NAD/FAD-binding domain
13 13 6 0 SCOP 49452 Starch-binding domain-like
13 13 3 1 SCOP 48225 Seven-hairpin glycosidases
13 12 7 0 SCOP 68906 SAP domain
13 13 3 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
13 13 5 0 SCOP 63491 BAG domain
13 13 6 0 SCOP 110942 HSP90 C-terminal domain
13 13 5 0 SCOP 109715 DEK C-terminal domain
13 13 5 0 SCOP 161245 Zinc hairpin stack
12 12 3 0 SCOP 47336 ACP-like
12 11 2 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
12 12 2 1 SCOP 50324 Inorganic pyrophosphatase
12 7 4 1 SCOP 55298 YjgF-like
12 12 5 1 SCOP 52949 Macro domain-like
12 12 3 1 SCOP 48256 Citrate synthase
12 12 1 1 SCOP 49777 PEBP-like
12 12 4 1 SCOP 101112 Oxygen-evolving enhancer protein 3,
12 12 3 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
12 12 5 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
12 12 5 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
12 12 4 1 SCOP 51604 Enolase C-terminal domain-like
12 12 3 0 SCOP 160443 SMR domain-like
12 12 3 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
12 12 8 0 SCOP 144232 HIT/MYND zinc finger-like
12 12 4 1 SCOP 75632 Cullin homology domain
12 12 3 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
12 12 4 0 SCOP 55277 GYF domain
12 12 2 0 SCOP 140383 BSD domain-like
11 10 4 1 SCOP 56047 Ribosomal protein S8
11 11 3 0 SCOP 46946 S13-like H2TH domain
11 11 6 2 SCOP 55821 YrdC/RibB
11 11 3 1 SCOP 55205 EPT/RTPC-like
11 11 2 1 SCOP 47226 Histidine-containing phosphotransfer domain, HPT domain
11 7 3 1 SCOP 69645 Arp2/3 complex subunits
11 11 2 1 SCOP 81483 Bacterial photosystem II reaction centre, L and M subunits
11 11 2 1 SCOP 55239 RuBisCO, small subunit
11 10 3 1 SCOP 111352 Ammonium transporter
11 11 5 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
11 11 2 1 SCOP 56574 Serpins
11 11 5 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
11 11 8 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
11 11 3 0 SCOP 52935 PK C-terminal domain-like
11 11 9 0 SCOP 81995 beta-sandwich domain of Sec23/24
11 11 3 0 SCOP 52129 Caspase-like
11 11 7 1 SCOP 81271 TGS-like
11 11 4 0 SCOP 48350 GTPase activation domain, GAP
11 11 1 1 SCOP 47874 Annexin
11 10 3 1 SCOP 47862 Saposin
11 11 1 1 SCOP 116768 DNA-binding domain of EIN3-like
10 10 4 1 SCOP 56808 Ribosomal protein L1
10 10 6 2 SCOP 53697 SIS domain
10 10 2 1 SCOP 52161 Ribosomal protein L13
10 10 3 1 SCOP 54648 DLC
10 8 2 1 SCOP 54909 Dimeric alpha+beta barrel
10 10 5 1 SCOP 52016 LeuD/IlvD-like
10 10 2 0 SCOP 110857 Gamma-glutamyl cyclotransferase-like
10 10 3 0 SCOP 54736 ClpS-like
10 10 3 1 SCOP 89124 Nop domain
10 10 5 0 SCOP 101898 NHL repeat
10 10 3 1 SCOP 48056 Di-copper centre-containing domain
10 10 3 1 SCOP 54826 Enolase N-terminal domain-like
10 10 2 0 SCOP 52075 Outer arm dynein light chain 1
10 6 5 1 SCOP 56042 PurM C-terminal domain-like
10 10 4 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
10 7 6 1 SCOP 55326 PurM N-terminal domain-like
10 10 4 0 SCOP 144083 Magnesium transport protein CorA, transmembrane region
10 8 6 1 SCOP 158702 Sec63 N-terminal domain-like
10 10 4 0 SCOP 57277 Granulin repeat
10 10 6 0 SCOP 57933 TAZ domain
10 10 6 0 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
10 10 8 0 SCOP 82919 Zn-finger domain of Sec23/24
9 9 4 1 SCOP 53790 Tetrapyrrole methylase
9 9 5 0 SCOP 110324 Ribosomal L27 protein-like
9 7 3 2 SCOP 51726 UROD/MetE-like
9 9 6 1 SCOP 53328 Formyltransferase
9 9 3 1 SCOP 56019 The spindle assembly checkpoint protein mad2
9 9 2 1 SCOP 55770 Profilin (actin-binding protein)
9 7 4 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
9 8 5 0 SCOP 141571 Pentapeptide repeat-like
9 9 4 0 SCOP 103256 Hypothetical protein TM0160
9 9 5 1 SCOP 103025 Folate-binding domain
9 9 2 1 SCOP 102645 CoaB-like
9 9 4 1 SCOP 48019 post-AAA+ oligomerization domain-like
9 8 4 1 SCOP 51971 Nucleotide-binding domain
9 9 4 0 SCOP 55658 L9 N-domain-like
9 9 3 1 SCOP 52210 Succinyl-CoA synthetase domains
9 5 3 1 SCOP 56053 Ribosomal protein L6
9 9 3 0 SCOP 102735 Trigger factor ribosome-binding domain
9 9 3 0 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
9 9 6 1 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
9 9 2 0 SCOP 54529 Mitochondrial glycoprotein MAM33-like
9 9 5 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
9 9 7 1 SCOP 81811 Helical domain of Sec23/24
8 8 2 0 SCOP 53167 Purine and uridine phosphorylases
8 8 6 1 SCOP 82649 SufE/NifU
8 8 3 1 SCOP 52980 Restriction endonuclease-like
8 7 3 1 SCOP 55068 Peptide methionine sulfoxide reductase
8 8 3 1 SCOP 51730 FAD-linked oxidoreductase
8 8 3 0 SCOP 89360 HesB-like domain
8 8 4 1 SCOP 50715 Ribosomal protein L25-like
8 8 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
8 8 5 1 SCOP 142695 RibA-like
8 8 2 0 SCOP 144122 Tim10-like
8 8 2 1 SCOP 53056 beta-carbonic anhydrase, cab
8 7 3 1 SCOP 51069 Carbonic anhydrase
8 8 2 1 SCOP 50692 ADC-like
8 8 6 0 SCOP 69322 Tricorn protease domain 2
8 8 3 0 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
8 7 3 1 SCOP 111321 AF1104-like
8 8 1 1 SCOP 142535 AF0625-like
8 7 6 0 SCOP 69304 Tricorn protease N-terminal domain
8 5 3 1 SCOP 56014 Nitrite and sulphite reductase 4Fe-4S domain-like
8 8 2 0 SCOP 47090 PGBD-like
8 8 3 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
8 8 3 0 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
8 8 2 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
8 8 2 1 SCOP 101152 Mob1/phocein
8 8 1 1 SCOP 118359 Expressed protein At2g23090/F21P24.15
8 8 1 0 SCOP 110004 Glycolipid transfer protein, GLTP
8 8 1 0 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
8 8 5 0 SCOP 54368 Glutamine synthetase, N-terminal domain
8 8 2 0 SCOP 111388 Pollen allergen ole e 6
8 8 2 1 SCOP 109920 Hypothetical protein At3g22680
8 8 2 1 SCOP 54585 Cdc48 domain 2-like
7 7 3 2 SCOP 54686 Ribosomal protein L16p/L10e
7 7 3 1 SCOP 52080 Ribosomal proteins L15p and L18e
7 7 3 0 SCOP 143800 L28p-like
7 7 3 0 SCOP 47060 S15/NS1 RNA-binding domain
7 7 3 0 SCOP 101908 Putative isomerase YbhE
7 7 2 0 SCOP 55129 Ribosomal protein L30p/L7e
7 7 3 0 SCOP 46561 Ribosomal protein L29 (L29p)
7 7 3 2 SCOP 46626 Cytochrome c
7 7 3 1 SCOP 56322 ADC synthase
7 7 1 1 SCOP 57798 Casein kinase II beta subunit
7 7 5 0 SCOP 47027 Acyl-CoA binding protein
7 7 5 0 SCOP 54897 Protease propeptides/inhibitors
7 7 4 1 SCOP 47819 HRDC-like
7 7 3 1 SCOP 48439 Protein prenylyltransferase
7 7 2 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
7 7 4 0 SCOP 55257 RBP11-like subunits of RNA polymerase
7 7 5 0 SCOP 58113 Apolipoprotein A-I
7 7 4 0 SCOP 64268 PX domain
7 7 1 0 SCOP 102712 JAB1/MPN domain
7 7 3 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
7 7 2 0 SCOP 54626 Chalcone isomerase
7 7 2 0 SCOP 102198 Putative cyclase
7 6 3 0 SCOP 89372 Fucose-specific lectin
7 7 1 0 SCOP 158745 LanC-like
7 7 4 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
7 7 4 0 SCOP 82708 R3H domain
7 7 5 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
7 7 2 0 SCOP 50916 Rap30/74 interaction domains
7 7 4 0 SCOP 143503 PUG domain-like
6 6 2 0 SCOP 48013 NusB-like
6 6 2 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
6 6 2 1 SCOP 52166 Ribosomal protein L4
6 6 2 1 SCOP 55282 RL5-like
6 6 2 1 SCOP 75620 Release factor
6 6 4 1 SCOP 51351 Triosephosphate isomerase (TIM)
6 6 2 1 SCOP 51713 tRNA-guanine transglycosylase
6 6 4 1 SCOP 52313 Ribosomal protein S2
6 6 4 1 SCOP 48613 Heme oxygenase-like
6 6 1 0 SCOP 52499 Isochorismatase-like hydrolases
6 6 3 1 SCOP 55144 LigT-like
6 5 2 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
6 6 4 1 SCOP 49329 Cu,Zn superoxide dismutase-like
6 6 1 0 SCOP 50044 SH3-domain
6 6 2 0 SCOP 47694 Cytochrome c oxidase subunit h
6 6 2 1 SCOP 56529 FAH
6 6 3 1 SCOP 64153 YjeF N-terminal domain-like
6 6 1 2 SCOP 55909 Pentein
6 6 4 0 SCOP 141734 HisI-like
6 6 2 0 SCOP 47413 lambda repressor-like DNA-binding domains
6 6 3 1 SCOP 51338 Composite domain of metallo-dependent hydrolases
6 6 3 1 SCOP 101386 all-alpha NTP pyrophosphatases
6 6 4 0 SCOP 57802 Rubredoxin-like
6 6 2 0 SCOP 48695 Multiheme cytochromes
6 6 2 1 SCOP 55287 RPB5-like RNA polymerase subunit
6 6 1 0 SCOP 116820 Rps17e-like
6 6 2 0 SCOP 160374 RplX-like
6 6 2 1 SCOP 102462 Peptidyl-tRNA hydrolase II
6 6 3 0 SCOP 53092 Creatinase/prolidase N-terminal domain
6 2 2 0 SCOP 50199 Staphylococcal nuclease
6 6 5 1 SCOP 51246 Rudiment single hybrid motif
6 6 4 0 SCOP 50370 Ricin B-like lectins
6 6 2 1 SCOP 82114 Riboflavin kinase-like
6 6 3 0 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
6 6 3 0 SCOP 141673 MOSC N-terminal domain-like
6 6 4 1 SCOP 50621 Alanine racemase C-terminal domain-like
6 6 2 0 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
6 6 3 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
6 6 2 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
6 6 4 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
6 6 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
6 6 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
6 6 2 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
6 3 2 1 SCOP 55124 Nitrite/Sulfite reductase N-terminal domain-like
6 6 4 1 SCOP 47446 Signal peptide-binding domain
6 6 3 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
6 6 2 0 SCOP 57845 B-box zinc-binding domain
6 4 2 0 SCOP 55394 Bactericidal permeability-increasing protein, BPI
6 6 3 0 SCOP 158639 ENT-like
6 6 4 1 SCOP 48425 Sec7 domain
6 6 2 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
6 6 4 0 SCOP 140996 Hermes dimerisation domain
6 6 1 1 SCOP 63887 P-domain of calnexin/calreticulin
6 6 3 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
6 6 2 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
6 6 2 0 SCOP 160996 HI0933 insert domain-like
5 5 2 0 SCOP 56731 DNA primase core
5 5 2 0 SCOP 46911 Ribosomal protein S18
5 5 2 0 SCOP 54570 Ribosomal protein S19
5 5 2 1 SCOP 103491 Preprotein translocase SecY subunit
5 5 2 0 SCOP 160369 Ribosomal protein L10-like
5 5 3 0 SCOP 54995 Ribosomal protein S6
5 5 1 1 SCOP 54506 Diaminopimelate epimerase-like
5 5 1 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
5 5 1 1 SCOP 55418 eIF4e-like
5 4 3 1 SCOP 161077 Photosystem II antenna protein-like
5 5 2 1 SCOP 53795 PEP carboxykinase-like
5 5 2 0 SCOP 158615 RbcX-like
5 5 3 0 SCOP 55154 CYTH-like phosphatases
5 5 1 1 SCOP 56762 HydB/Nqo4-like
5 5 3 1 SCOP 50993 Peptidase/esterase 'gauge' domain
5 5 3 0 SCOP 55200 Translation initiation factor IF3, C-terminal domain
5 5 3 1 SCOP 51391 Thiamin phosphate synthase
5 5 4 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
5 5 3 0 SCOP 50486 FMT C-terminal domain-like
5 5 2 0 SCOP 69786 YggU-like
5 4 2 1 SCOP 89562 RraA-like
5 4 3 1 SCOP 56726 DNA topoisomerase IV, alpha subunit
5 5 1 0 SCOP 143437 THUMP domain-like
5 4 3 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
5 4 3 1 SCOP 55979 DNA clamp
5 5 3 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
5 5 1 0 SCOP 82093 Heme chaperone CcmE
5 5 3 0 SCOP 69318 Integrin alpha N-terminal domain
5 5 1 0 SCOP 48619 Phospholipase A2, PLA2
5 5 2 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
5 5 1 0 SCOP 141255 YccV-like
5 5 4 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
5 5 3 0 SCOP 48334 DNA repair protein MutS, domain III
5 5 2 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
5 5 2 0 SCOP 90002 Hypothetical protein YjiA, C-terminal domain
5 5 2 0 SCOP 69075 Glutamyl tRNA-reductase dimerization domain
5 5 4 0 SCOP 57184 Growth factor receptor domain
5 5 3 1 SCOP 69000 FAD-dependent thiol oxidase
5 5 4 0 SCOP 158573 GINS helical bundle-like
5 5 5 0 SCOP 63570 PABC (PABP) domain
5 5 3 0 SCOP 116846 MIT domain
5 5 2 0 SCOP 57414 Hairpin loop containing domain-like
5 5 3 1 SCOP 101233 PWI domain
5 5 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
5 5 2 0 SCOP 69742 Glutamyl tRNA-reductase catalytic, N-terminal domain
5 5 2 0 SCOP 46942 Elongation factor TFIIS domain 2
5 5 3 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
5 5 3 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
5 5 3 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
4 4 1 1 SCOP 47973 Ribosomal protein S7
4 4 1 1 SCOP 56420 Peptide deformylase
4 4 2 1 SCOP 54999 Ribosomal protein S10
4 4 2 0 SCOP 56214 4'-phosphopantetheinyl transferase
4 4 3 1 SCOP 53748 Phosphoglycerate kinase
4 4 1 1 SCOP 55194 Ribosome recycling factor, RRF
4 4 1 1 SCOP 51283 dUTPase-like
4 4 3 0 SCOP 82657 BolA-like
4 4 2 0 SCOP 48140 Ribosomal protein L19 (L19e)
4 4 2 0 SCOP 52042 Ribosomal protein L32e
4 4 2 1 SCOP 56634 Heme-dependent catalase-like
4 4 2 0 SCOP 140718 Mediator hinge subcomplex-like
4 4 1 0 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
4 4 1 0 SCOP 159468 AtpF-like
4 4 2 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
4 4 1 0 SCOP 51645 Malate synthase G
4 4 2 0 SCOP 82282 Homocysteine S-methyltransferase
4 4 2 1 SCOP 53800 Chelatase
4 4 2 1 SCOP 101960 Stabilizer of iron transporter SufD
4 4 2 1 SCOP 81558 Photosystem I subunits PsaA/PsaB
4 4 2 1 SCOP 101546 ASF1-like
4 4 1 0 SCOP 143243 Nqo5-like
4 4 1 0 SCOP 55331 Tautomerase/MIF
4 4 1 0 SCOP 101744 Rof/RNase P subunit-like
4 4 2 0 SCOP 54975 Acylphosphatase/BLUF domain-like
4 4 2 0 SCOP 143456 VC0467-like
4 4 2 0 SCOP 49472 Transthyretin (synonym: prealbumin)
4 4 1 0 SCOP 102588 LmbE-like
4 4 1 0 SCOP 50939 Sialidases
4 4 1 0 SCOP 74784 Translin
4 4 2 1 SCOP 54984 eEF-1beta-like
4 4 3 0 SCOP 46589 tRNA-binding arm
4 4 3 0 SCOP 160059 PriA/YqbF domain
4 4 2 1 SCOP 68923 PEP carboxykinase N-terminal domain
4 2 1 0 SCOP 53681 Aspartate/glutamate racemase
4 4 1 1 SCOP 110019 ERO1-like
4 4 4 0 SCOP 81891 Poly A polymerase C-terminal region-like
4 4 3 0 SCOP 143548 Serine metabolism enzymes domain
4 4 3 0 SCOP 54752 RecA protein, C-terminal domain
4 4 2 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
4 4 3 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
4 4 1 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
4 4 1 0 SCOP 161065 ATP synthase D chain-like
4 4 2 0 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
4 4 2 0 SCOP 50911 Mannose 6-phosphate receptor domain
4 4 2 0 SCOP 143791 DUSP-like
4 2 2 1 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
4 4 2 0 SCOP 103243 KA1-like
4 4 1 0 SCOP 160527 V-type ATPase subunit E-like
4 4 2 0 SCOP 54556 Chitinase insertion domain
4 4 1 0 SCOP 140427 VPS28 C-terminal domain-like
4 4 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
4 4 2 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
4 4 3 0 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
4 4 3 0 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
4 4 2 0 SCOP 101238 XPC-binding domain
4 4 2 0 SCOP 158230 PRP4-like
3 3 2 1 SCOP 52141 Uracil-DNA glycosylase-like
3 3 1 0 SCOP 57840 Ribosomal protein L36
3 3 2 1 SCOP 64263 Prokaryotic ribosomal protein L17
3 3 1 0 SCOP 143034 L35p-like
3 3 3 2 SCOP 53597 Dihydrofolate reductase-like
3 3 2 1 SCOP 75625 YebC-like
3 3 2 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
3 3 2 1 SCOP 103263 Chorismate synthase, AroC
3 3 2 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
3 3 1 1 SCOP 52121 Lumazine synthase
3 3 1 0 SCOP 54575 Ribosomal protein L31e
3 3 1 0 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
3 3 1 1 SCOP 69500 DTD-like
3 3 1 0 SCOP 63393 RNA polymerase subunits
3 3 1 0 SCOP 144210 Nop10-like SnoRNP
3 2 2 0 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
3 3 1 0 SCOP 48662 Ribosomal protein L39e
3 3 1 0 SCOP 143870 PF0523-like
3 3 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
3 3 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
3 3 1 1 SCOP 46458 Globin-like
3 3 1 0 SCOP 50090 Electron transport accessory proteins
3 3 1 1 SCOP 81536 Subunit III of photosystem I reaction centre, PsaF
3 3 3 1 SCOP 51717 Dihydropteroate synthetase-like
3 3 1 0 SCOP 56601 beta-lactamase/transpeptidase-like
3 3 2 0 SCOP 82697 PurS-like
3 3 2 0 SCOP 103441 PetM subunit of the cytochrome b6f complex
3 3 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
3 3 2 2 SCOP 54913 GlnB-like
3 3 2 0 SCOP 53218 Molybdenum cofactor biosynthesis proteins
3 3 2 0 SCOP 158997 Trm112p-like
3 3 3 1 SCOP 48600 Chorismate mutase II
3 3 3 1 SCOP 110069 ApaG-like
3 3 3 1 SCOP 52335 Methylglyoxal synthase-like
3 3 1 1 SCOP 110581 Indigoidine synthase A-like
3 3 1 0 SCOP 53182 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
3 3 1 1 SCOP 46548 alpha-helical ferredoxin
3 3 2 0 SCOP 143865 CorA soluble domain-like
3 3 1 0 SCOP 55608 Homing endonucleases
3 3 3 0 SCOP 142921 WGR domain-like
3 3 1 1 SCOP 56719 Type II DNA topoisomerase
3 3 2 1 SCOP 52009 Phosphohistidine domain
3 3 2 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
3 3 1 0 SCOP 90257 Myosin rod fragments
3 3 1 0 SCOP 69055 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
3 3 2 0 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
3 3 1 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
3 3 1 0 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
3 3 2 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
3 3 2 0 SCOP 51984 MurCD N-terminal domain
3 3 1 0 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
3 3 1 0 SCOP 47741 CO dehydrogenase ISP C-domain like
3 3 1 0 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
3 3 2 0 SCOP 55550 SH2 domain
3 3 2 0 SCOP 74924 Cap-Gly domain
3 3 3 1 SCOP 49348 Clathrin adaptor appendage domain
3 3 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
3 3 3 0 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
3 3 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
3 1 1 0 SCOP 49303 beta-Galactosidase/glucuronidase domain
3 3 2 0 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
3 3 1 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
3 3 3 0 SCOP 75553 Smc hinge domain
3 3 2 0 SCOP 47040 Kix domain of CBP (creb binding protein)
3 3 3 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
3 3 3 0 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
3 3 3 1 SCOP 81886 Helical scaffold and wing domains of SecA
3 3 1 0 SCOP 57424 LDL receptor-like module
3 3 1 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
3 3 2 0 SCOP 49758 Calpain large subunit, middle domain (domain III)
3 3 2 0 SCOP 140612 EB1 dimerisation domain-like
3 3 2 0 SCOP 64586 C-terminal domain of ProRS
3 3 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
3 3 2 0 SCOP 109736 FGAM synthase PurL, linker domain
3 3 3 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
2 2 1 0 SCOP 82607 YbaB-like
2 2 1 0 SCOP 89919 Ribosome-binding factor A, RbfA
2 2 2 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
2 2 1 0 SCOP 141091 L21p-like
2 2 2 0 SCOP 109998 Triger factor/SurA peptide-binding domain-like
2 2 1 1 SCOP 56770 HydA/Nqo6-like
2 2 1 1 SCOP 54285 MoaD/ThiS
2 2 1 0 SCOP 144217 CSL zinc finger
2 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
2 2 1 0 SCOP 81321 Family A G protein-coupled receptor-like
2 2 1 0 SCOP 142897 TFB5-like
2 2 1 0 SCOP 103456 Preprotein translocase SecE subunit
2 2 1 0 SCOP 55248 PCD-like
2 2 1 0 SCOP 89895 FYSH domain
2 2 1 0 SCOP 110849 ParB/Sulfiredoxin
2 2 2 1 SCOP 88713 Glycoside hydrolase/deacetylase
2 2 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
2 2 1 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
2 2 1 1 SCOP 46924 RNA polymerase subunit RPB10
2 2 1 1 SCOP 63562 RPB6/omega subunit-like
2 2 2 1 SCOP 81342 Transmembrane di-heme cytochromes
2 2 1 1 SCOP 81568 Photosystem I reaction center subunit XI, PsaL
2 2 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
2 2 2 0 SCOP 103642 Sec-C motif
2 2 1 1 SCOP 51998 PFL-like glycyl radical enzymes
2 2 2 1 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
2 2 1 1 SCOP 56266 DmpA/ArgJ-like
2 2 1 0 SCOP 58100 Bacterial hemolysins
2 2 2 0 SCOP 82771 GIY-YIG endonuclease
2 2 1 0 SCOP 53807 "Helical backbone" metal receptor
2 2 2 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
2 2 2 1 SCOP 56349 DNA breaking-rejoining enzymes
2 2 2 0 SCOP 55083 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
2 2 1 0 SCOP 89550 PHP domain-like
2 2 2 0 SCOP 159501 EreA/ChaN-like
2 2 1 1 SCOP 53213 LigB-like
2 2 1 0 SCOP 89095 GatB/YqeY motif
2 2 1 1 SCOP 158694 UraD-Like
2 2 2 0 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
2 2 2 1 SCOP 55826 YbaK/ProRS associated domain
2 2 2 0 SCOP 56821 Prismane protein-like
2 2 2 0 SCOP 141130 Acetamidase/Formamidase-like
2 2 1 1 SCOP 56925 OMPA-like
2 2 1 0 SCOP 160104 Acetoacetate decarboxylase-like
2 2 2 1 SCOP 100939 SPOC domain-like
2 2 1 0 SCOP 158710 PSPTO4464-like
2 2 2 1 SCOP 55186 ThrRS/AlaRS common domain
2 2 1 0 SCOP 158832 Tex N-terminal region-like
2 2 2 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
2 2 1 0 SCOP 50960 TolB, C-terminal domain
2 2 2 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
2 2 2 0 SCOP 49344 CBD9-like
2 2 2 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
2 2 2 1 SCOP 142877 EndoU-like
2 2 1 0 SCOP 144206 NOB1 zinc finger-like
2 2 1 0 SCOP 56436 C-type lectin-like
2 2 2 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
2 2 2 1 SCOP 53920 Fe-only hydrogenase
2 2 2 0 SCOP 46600 C-terminal UvrC-binding domain of UvrB
2 2 2 0 SCOP 110836 Hypothetical protein SAV1430
2 2 2 0 SCOP 63418 MurE/MurF N-terminal domain
2 2 2 0 SCOP 117289 Nucleoporin domain
2 2 2 0 SCOP 110921 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
2 2 2 0 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
2 2 1 1 SCOP 55637 Cell cycle regulatory proteins
2 2 1 0 SCOP 55545 beta-N-acetylhexosaminidase-like domain
2 2 2 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
2 2 2 0 SCOP 55904 Ornithine decarboxylase C-terminal domain
2 2 2 0 SCOP 54991 Anticodon-binding domain of PheRS
2 2 1 0 SCOP 110221 AbfB domain
2 2 2 1 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
2 2 2 0 SCOP 69203 Nucleoplasmin-like core domain
2 2 2 1 SCOP 89817 Mago nashi protein
2 2 1 1 SCOP 82109 MIR domain
2 2 2 0 SCOP 117839 WWE domain
2 2 2 0 SCOP 82051 Obg GTP-binding protein N-terminal domain
2 2 2 1 SCOP 88688 Families 57/38 glycoside transferase middle domain
2 2 2 0 SCOP 47050 VHP, Villin headpiece domain
2 2 1 0 SCOP 55261 GAD domain-like
2 2 2 0 SCOP 57027 Plant inhibitors of proteinases and amylases
2 2 1 1 SCOP 89942 eEF1-gamma domain
2 2 2 0 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
2 2 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
2 2 2 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
2 2 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
2 2 1 0 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
2 2 2 0 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
2 2 1 0 SCOP 116878 TrmE connector domain
2 2 1 0 SCOP 55653 Ribosomal protein L9 C-domain
2 2 1 1 SCOP 49441 Cytochrome f, large domain
2 2 1 0 SCOP 144256 TSP9-like
2 2 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
2 2 2 0 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 142433 CinA-like
1 1 1 0 SCOP 64182 DHH phosphoesterases
1 1 1 1 SCOP 74731 Ribosomal protein L20
1 1 1 1 SCOP 51658 Xylose isomerase-like
1 1 1 1 SCOP 82549 DAK1/DegV-like
1 1 1 0 SCOP 46992 Ribosomal protein S20
1 1 1 0 SCOP 89623 Ribose/Galactose isomerase RpiB/AlsB
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 69765 IpsF-like
1 1 1 1 SCOP 56796 Dehydroquinate synthase-like
1 1 1 1 SCOP 55387 Frataxin/Nqo15-like
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 0 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 53639 AraD/HMP-PK domain-like
1 1 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 46988 Tubulin chaperone cofactor A
1 1 1 0 SCOP 69618 HemD-like
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 1 SCOP 81442 Cytochrome c oxidase subunit I-like
1 1 1 1 SCOP 64234 Photosystem I subunit PsaD
1 1 1 0 SCOP 81563 Photosystem I reaction center subunit X, PsaK
1 1 1 1 SCOP 161045 Cytochrome b559 subunits
1 1 1 0 SCOP 161084 MAPEG domain-like
1 1 1 0 SCOP 111038 YjbQ-like
1 1 1 0 SCOP 55718 SCP-like
1 1 1 1 SCOP 118196 YaeB-like
1 1 1 0 SCOP 142754 NadA-like
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 0 SCOP 140663 TTHA0068-like
1 1 1 0 SCOP 116734 DNA methylase specificity domain
1 1 1 1 SCOP 54111 Urease, gamma-subunit
1 1 1 1 SCOP 51278 Urease, beta-subunit
1 1 1 0 SCOP 51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 1 SCOP 160909 ATP12-like
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 1 SCOP 101473 DhaL-like
1 1 1 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
1 1 1 0 SCOP 159659 Cgl1923-like
1 1 1 0 SCOP 69754 Ribosome binding protein Y (YfiA homologue)
1 1 1 0 SCOP 160631 SMI1/KNR4-like
1 1 1 0 SCOP 46950 Double-stranded DNA-binding domain
1 1 1 0 SCOP 50346 PRC-barrel domain
1 1 1 0 SCOP 160350 Rnp2-like
1 1 1 0 SCOP 69695 SRP19
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 1 SCOP 69336 Alpha subunit of glutamate synthase, C-terminal domain
1 1 1 0 SCOP 63825 YWTD domain
1 1 1 0 SCOP 102110 (2r)-phospho-3-sulfolactate synthase ComA
1 1 1 1 SCOP 48537 Phospholipase C/P1 nuclease
1 1 1 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
1 1 1 0 SCOP 55234 Cyanase C-terminal domain
1 1 1 0 SCOP 81336 F1F0 ATP synthase subunit A
1 1 1 0 SCOP 49384 Carbohydrate-binding domain
1 1 1 0 SCOP 49265 Fibronectin type III
1 1 1 0 SCOP 82679 N-utilization substance G protein NusG, N-terminal domain
1 1 1 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
1 1 1 0 SCOP 142984 Nqo1 middle domain-like
1 1 1 0 SCOP 46966 Spectrin repeat
1 1 1 0 SCOP 68912 Rho N-terminal domain-like
1 1 1 1 SCOP 54810 GMP synthetase C-terminal dimerisation domain
1 1 1 1 SCOP 140869 GUN4-like
1 1 1 0 SCOP 161270 PspA lactotransferrin-binding region
1 1 1 0 SCOP 48674 Fe-only hydrogenase smaller subunit
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 55945 TATA-box binding protein-like
1 1 1 0 SCOP 47794 Rad51 N-terminal domain-like
1 1 1 0 SCOP 140860 Pseudo ankyrin repeat-like
1 1 1 0 SCOP 75420 YhbC-like, N-terminal domain
1 1 1 0 SCOP 47933 ERP29 C domain-like
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 140490 Nqo1C-terminal domain-like
1 1 1 1 SCOP 141493 Allene oxide cyclase-like
1 1 1 1 SCOP 143975 IlvD/EDD N-terminal domain-like
1 1 1 0 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
1 1 1 1 SCOP 109993 VPS9 domain
1 1 1 1 SCOP 140984 PTPA-like
1 1 1 0 SCOP 48097 Regulator of G-protein signaling, RGS
1 1 1 1 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 47672 Transferrin receptor-like dimerisation domain
1 1 1 0 SCOP 140106 Calcyclin-binding protein-like
1 1 1 1 SCOP 143875 ERH-like
1 1 1 1 SCOP 142019 Nqo1 FMN-binding domain-like
1 1 1 0 SCOP 50809 XRCC4, N-terminal domain
1 1 1 1 SCOP 64158 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
1 1 1 1 SCOP 51649 RuBisCo, C-terminal domain
1 1 1 0 SCOP 54966 RuBisCO, large subunit, small (N-terminal) domain
1 1 1 0 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
1 1 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
1 1 1 0 SCOP 56194 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
1 1 1 0 SCOP 47031 Second domain of FERM
1 1 1 1 SCOP 88802 Pre-PUA domain
1 1 1 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
1 1 1 0 SCOP 101420 C-terminal domain of Ku80
1 1 1 0 SCOP 143517 TRCF domain-like
1 1 1 0 SCOP 81502 ISP transmembrane anchor
1 1 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 53150 DNA repair protein MutS, domain II
1 1 1 0 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain

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The following superfamilies have one or more weak hits:

SCOP superfamily Troponin coil-coiled subunits
SCOP superfamily Somatomedin B domain
SCOP superfamily Neurotransmitter-gated ion-channel transmembrane pore
SCOP superfamily Hypothetical protein Yml108w
SCOP superfamily YajQ-like
SCOP superfamily Hypothetical protein VC0424
SCOP superfamily DNA-binding protein Tfx
SCOP superfamily Doublecortin (DC)
SCOP superfamily Amyloid beta a4 protein copper binding domain (domain 2)
SCOP superfamily CoA-transferase family III (CaiB/BaiF)
SCOP superfamily Hypothetical protein YojF
SCOP superfamily Baseplate structural protein gp8
SCOP superfamily Prokaryotic lipoproteins and lipoprotein localization factors
SCOP superfamily Collagen-binding domain
SCOP superfamily Hypothetical protein TM1070
SCOP superfamily TorD-like
SCOP superfamily Cobalamin adenosyltransferase-like
SCOP superfamily post-HMGL domain-like
SCOP superfamily Satellite viruses
SCOP superfamily Group I dsDNA viruses
SCOP superfamily ssDNA viruses
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Apolipoprotein A-II
SCOP superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region
SCOP superfamily MesJ substrate recognition domain-like
SCOP superfamily OsmC-like
SCOP superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
SCOP superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain
SCOP superfamily Probable GTPase Der, C-terminal domain
SCOP superfamily BAH domain
SCOP superfamily Viral chemokine binding protein m3
SCOP superfamily Orange carotenoid protein, N-terminal domain
SCOP superfamily BRCA2 helical domain
SCOP superfamily BEACH domain
SCOP superfamily Crustacean CHH/MIH/GIH neurohormone
SCOP superfamily FF domain
SCOP superfamily a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Cytochrome c oxidase subunit II-like, transmembrane region
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
SCOP superfamily Mitochondrial cytochrome c oxidase subunit IV
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily Small-conductance potassium channel
SCOP superfamily Adenylylcyclase toxin (the edema factor)
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily Mitotic arrest deficient-like 1, Mad1
SCOP superfamily Putative transcriptional regulator TM1602, C-terminal domain
SCOP superfamily VSV matrix protein
SCOP superfamily Plakin repeat
SCOP superfamily Hypothetical protein MTH777 (MT0777)
SCOP superfamily YhbC-like, C-terminal domain
SCOP superfamily V-region of surface antigen I/II (SA I/II, PAC)
SCOP superfamily Major surface antigen p30, SAG1
SCOP superfamily Aconitase B, N-terminal domain
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily TolA/TonB C-terminal domain
SCOP superfamily C-terminal domain of PLC-beta
SCOP superfamily Colicin E3 receptor domain
SCOP superfamily Eea1 homodimerisation domain
SCOP superfamily OMPT-like
SCOP superfamily LCCL domain
SCOP superfamily Urease metallochaperone UreE, C-terminal domain
SCOP superfamily DsrC, the gamma subunit of dissimilatory sulfite reductase
SCOP superfamily Transcription factor NusA, N-terminal domain
SCOP superfamily Cloacin translocation domain
SCOP superfamily Cell wall binding repeat
SCOP superfamily Urease metallochaperone UreE, N-terminal domain
SCOP superfamily Quinohemoprotein amine dehydrogenase C chain
SCOP superfamily Hypothetical protein YjbJ
SCOP superfamily Bcr-Abl oncoprotein oligomerization domain
SCOP superfamily RecG, N-terminal domain
SCOP superfamily Hemolysin expression modulating protein HHA
SCOP superfamily F1 ATPase inhibitor, IF1, C-terminal domain
SCOP superfamily Intermediate filament protein, coiled coil region
SCOP superfamily Phase 1 flagellin
SCOP superfamily Hsp33 domain
SCOP superfamily YlxR-like
SCOP superfamily SirA-like
SCOP superfamily Head-to-tail joining protein W, gpW
SCOP superfamily MoeA N-terminal region -like
SCOP superfamily Methuselah ectodomain
SCOP superfamily Ribonuclease domain of colicin E3
SCOP superfamily Sortase
SCOP superfamily SAND domain-like
SCOP superfamily Cytolysin/lectin
SCOP superfamily Nicotinic receptor ligand binding domain-like
SCOP superfamily Ganglioside M2 (gm2) activator
SCOP superfamily Telomeric repeat binding factor (TRF) dimerisation domain
SCOP superfamily Frizzled cysteine-rich domain
SCOP superfamily LEM domain
SCOP superfamily Colicin Ia, N-terminal domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Virus ectodomain
SCOP superfamily Influenza hemagglutinin (stalk)
SCOP superfamily N-terminal coiled coil domain from apc
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Delta-sleep-inducing peptide immunoreactive peptide
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Fibrinogen coiled-coil and central regions
SCOP superfamily Chicken cartilage matrix protein
SCOP superfamily Inovirus (filamentous phage) major coat protein
SCOP superfamily Triple coiled coil domain of C-type lectins
SCOP superfamily Inhibitor of apoptosis (IAP) repeat
SCOP superfamily Zn-binding domains of ADDBP
SCOP superfamily Metallothionein
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
SCOP superfamily Hypothetical protein MTH1184
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
SCOP superfamily HIPIP (high potential iron protein)
SCOP superfamily Invertebrate chitin-binding proteins
SCOP superfamily Type X cellulose binding domain, CBDX
SCOP superfamily FnI-like domain
SCOP superfamily Methylamine dehydrogenase, L chain
SCOP superfamily Blood coagulation inhibitor (disintegrin)
SCOP superfamily Crisp domain-like
SCOP superfamily Complement control module/SCR domain
SCOP superfamily Cystine-knot cytokines
SCOP superfamily Kringle-like
SCOP superfamily Snake toxin-like
SCOP superfamily Elafin-like
SCOP superfamily Bowman-Birk inhibitor, BBI
SCOP superfamily Colipase-like
SCOP superfamily Cyclotides
SCOP superfamily Insulin-like
SCOP superfamily Viral glycoprotein, central and dimerisation domains
SCOP superfamily Aerolisin/ETX pore-forming domain
SCOP superfamily Lipovitellin-phosvitin complex; beta-sheet shell regions
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily Light-harvesting complex subunits
SCOP superfamily Bcl-2 inhibitors of programmed cell death
SCOP superfamily delta-Endotoxin (insectocide), N-terminal domain
SCOP superfamily Diphtheria toxin, middle domain
SCOP superfamily Colicin
SCOP superfamily Nitric oxide (NO) synthase oxygenase domain
SCOP superfamily gp120 core
SCOP superfamily SRCR-like
SCOP superfamily Nitrile hydratase alpha chain
SCOP superfamily DNA topoisomerase I domain
SCOP superfamily N-acetylmuramoyl-L-alanine amidase-like
SCOP superfamily 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
SCOP superfamily beta-lactamase-inhibitor protein, BLIP
SCOP superfamily RNA bacteriophage capsid protein
SCOP superfamily Subtilisin inhibitor
SCOP superfamily Copper amine oxidase, domain N
SCOP superfamily DNA repair protein MutS, domain I
SCOP superfamily tRNA-intron endonuclease N-terminal domain-like
SCOP superfamily Yeast killer toxins
SCOP superfamily Pepsin inhibitor-3
SCOP superfamily Nucleotide cyclase
SCOP superfamily Killer toxin KP6 alpha-subunit
SCOP superfamily CheY-binding domain of CheA
SCOP superfamily Heme-binding protein A (HasA)
SCOP superfamily DsbC/DsbG N-terminal domain-like
SCOP superfamily Prion-like
SCOP superfamily RNase A-like
SCOP superfamily His-Me finger endonucleases
SCOP superfamily Microbial ribonucleases
SCOP superfamily Glutaminase/Asparaginase
SCOP superfamily FucI/AraA N-terminal and middle domains
SCOP superfamily Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
SCOP superfamily Nitrogenase accessory factor-like
SCOP superfamily PTS system fructose IIA component-like
SCOP superfamily Resolvase-like
SCOP superfamily B12-dependent dehydatase associated subunit
SCOP superfamily TolB, N-terminal domain
SCOP superfamily RNA 3'-terminal phosphate cyclase, RPTC, insert domain
SCOP superfamily Methylesterase CheB, C-terminal domain
SCOP superfamily PTS IIb component
SCOP superfamily Type II 3-dehydroquinate dehydratase
SCOP superfamily Barstar-related
SCOP superfamily Bacterial luciferase-like
SCOP superfamily Cyanovirin-N
SCOP superfamily Duplicated hybrid motif
SCOP superfamily Fibre shaft of virus attachment proteins
SCOP superfamily TRAP-like
SCOP superfamily An insect antifreeze protein
SCOP superfamily Insect cysteine-rich antifreeze protein
SCOP superfamily Outer surface protein
SCOP superfamily Bacteriochlorophyll A protein
SCOP superfamily Clathrin heavy-chain terminal domain
SCOP superfamily Nitrous oxide reductase, N-terminal domain
SCOP superfamily Thermostable phytase (3-phytase)
SCOP superfamily Hemopexin-like domain
SCOP superfamily Avidin/streptavidin
SCOP superfamily Cytokine
SCOP superfamily TIMP-like
SCOP superfamily DNA-binding domain of retroviral integrase
SCOP superfamily Myosin S1 fragment, N-terminal domain
SCOP superfamily C-terminal domain of transcriptional repressors
SCOP superfamily EV matrix protein
SCOP superfamily Baculovirus p35 protein
SCOP superfamily Spermadhesin, CUB domain
SCOP superfamily Virus attachment protein globular domain
SCOP superfamily ENV polyprotein, receptor-binding domain
SCOP superfamily Viral protein domain
SCOP superfamily PHM/PNGase F
SCOP superfamily Periplasmic chaperone C-domain
SCOP superfamily Cna protein B-type domain
SCOP superfamily Carboxypeptidase regulatory domain-like
SCOP superfamily p53-like transcription factors
SCOP superfamily Bacterial adhesins
SCOP superfamily Diphtheria toxin, C-terminal domain
SCOP superfamily Transglutaminase, two C-terminal domains
SCOP superfamily Immunoglobulin
SCOP superfamily Moesin tail domain
SCOP superfamily FinO-like
SCOP superfamily Tetraspanin
SCOP superfamily Serum albumin-like
SCOP superfamily Nuclear receptor ligand-binding domain
SCOP superfamily Tetracyclin repressor-like, C-terminal domain
SCOP superfamily Bacterial muramidases
SCOP superfamily A virus capsid protein alpha-helical domain
SCOP superfamily Aldehyde ferredoxin oxidoreductase, C-terminal domains
SCOP superfamily Class II MHC-associated invariant chain ectoplasmic trimerization domain
SCOP superfamily TrpR-like
SCOP superfamily An anticodon-binding domain of class I aminoacyl-tRNA synthetases
SCOP superfamily Transcription factor STAT-4 N-domain
SCOP superfamily LigA subunit of an aromatic-ring-opening dioxygenase LigAB
SCOP superfamily DBL homology domain (DH-domain)
SCOP superfamily FliG
SCOP superfamily N-terminal domain of DnaB helicase
SCOP superfamily DEATH domain
SCOP superfamily Iron-dependent repressor protein, dimerization domain
SCOP superfamily Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
SCOP superfamily Bacteriocin AS-48
SCOP superfamily Apolipophorin-III
SCOP superfamily Retroviral matrix proteins
SCOP superfamily lambda integrase-like, N-terminal domain
SCOP superfamily IHF-like DNA-binding proteins
SCOP superfamily Domain of early E2A DNA-binding protein, ADDBP
SCOP superfamily Anaphylotoxins (complement system)
SCOP superfamily N-terminal domain of cbl (N-cbl)
SCOP superfamily STAT
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
SCOP superfamily ROP protein
SCOP superfamily Retrovirus capsid dimerization domain-like
SCOP superfamily Colicin E immunity proteins
SCOP superfamily 4-helical cytokines
SCOP superfamily Bacterial GAP domain
SCOP superfamily alpha-catenin/vinculin-like
SCOP superfamily Proteasome activator
SCOP superfamily TMV-like viral coat proteins
SCOP superfamily Hemerythrin-like
SCOP superfamily Cytochromes
SCOP superfamily Apolipoprotein
SCOP superfamily Mitochondrial import receptor subunit Tom20
SCOP superfamily Diol dehydratase, gamma subunit
SCOP superfamily Fertilization protein
SCOP superfamily RAP domain-like
SCOP superfamily Bacterial immunoglobulin/albumin-binding domains
SCOP superfamily Smac/diablo
SCOP superfamily Enzyme IIa from lactose specific PTS, IIa-lac
SCOP superfamily Putative DNA-binding domain
SCOP superfamily N-terminal Zn binding domain of HIV integrase
SCOP superfamily Epsilon subunit of F1F0-ATP synthase C-terminal domain
SCOP superfamily Eukaryotic DNA topoisomerase I, dispensable insert domain
SCOP superfamily HR1 repeat
SCOP superfamily Gam-like
SCOP superfamily RILP dimerisation region
SCOP superfamily T-antigen specific domain-like
SCOP superfamily E7 C-terminal domain-like
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily YfgJ-like
SCOP superfamily MetI-like
SCOP superfamily MgtE membrane domain-like
SCOP superfamily SNF-like
SCOP superfamily ATP synthase B chain-like
SCOP superfamily Photosystem II reaction center protein L, PsbL
SCOP superfamily CV3147-like
SCOP superfamily SSO1389-like
SCOP superfamily PH0156-like
SCOP superfamily VPA0735-like
SCOP superfamily FlhC-like
SCOP superfamily Taf5 N-terminal domain-like
SCOP superfamily YqaI-like
SCOP superfamily FLJ32549 C-terminal domain-like
SCOP superfamily BT0923-like
SCOP superfamily YueI-like
SCOP superfamily PA1123-like
SCOP superfamily NMB0513-like
SCOP superfamily BLRF2-like
SCOP superfamily PG1857-like
SCOP superfamily BH3703-like
SCOP superfamily SP0830-like
SCOP superfamily Bacterial polysaccharide co-polymerase-like
SCOP superfamily FlaG-like
SCOP superfamily NMB0488-like
SCOP superfamily NRDP1 C-terminal domain-like
SCOP superfamily MM3350-like
SCOP superfamily YgaC/TfoX-N like
SCOP superfamily YdhG-like
SCOP superfamily XkdW-like
SCOP superfamily CdCA1 repeat-like
SCOP superfamily CobE/GbiG C-terminal domain-like
SCOP superfamily YmcC-like
SCOP superfamily AttH-like
SCOP superfamily NifT/FixU-like
SCOP superfamily NEAT domain-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily PMT central region-like
SCOP superfamily AGR C 984p-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily SMc04008-like
SCOP superfamily RPA2825-like
SCOP superfamily YheA/YmcA-like
SCOP superfamily Jann4075-like
SCOP superfamily BH3980-like
SCOP superfamily TAFH domain-like
SCOP superfamily FLJ32549 domain-like
SCOP superfamily YqcC-like
SCOP superfamily IVS-encoded protein-like
SCOP superfamily DsbB-like
SCOP superfamily Ta0600-like
SCOP superfamily Bacillus cereus metalloprotein-like
SCOP superfamily HP0062-like
SCOP superfamily TM1646-like
SCOP superfamily occludin/ELL-like
SCOP superfamily Sec2 N-terminal region
SCOP superfamily MPN010-like
SCOP superfamily Coronavirus NSP10-like
SCOP superfamily Vanabin-like
SCOP superfamily Heme iron utilization protein-like
SCOP superfamily Thermophilic metalloprotease-like
SCOP superfamily FdhE-like
SCOP superfamily Peptidoglycan deacetylase N-terminal noncatalytic region
SCOP superfamily XisI-like
SCOP superfamily ApbE-like
SCOP superfamily STIV B116-like
SCOP superfamily GAS2 domain-like
SCOP superfamily TM1622-like
SCOP superfamily TTP0101/SSO1404-like
SCOP superfamily Rv2632c-like
SCOP superfamily TTHA1013/TTHA0281-like
SCOP superfamily BB1717-like
SCOP superfamily Coronavirus NSP8-like
SCOP superfamily YjbR-like
SCOP superfamily PhtA domain-like
SCOP superfamily ComB-like
SCOP superfamily CofD-like
SCOP superfamily EAL domain-like
SCOP superfamily 'SARS ORF9b-like
SCOP superfamily Extracellular hemoglobin linker subunit, receptor domain
SCOP superfamily TM0957-like
SCOP superfamily CarD-like
SCOP superfamily Atu1913-like
SCOP superfamily Agglutinin HPA-like
SCOP superfamily ICP-like
SCOP superfamily RelB-like
SCOP superfamily Indolic compounds 2,3-dioxygenase-like
SCOP superfamily TROVE domain-like
SCOP superfamily USP8 N-terminal domain-like
SCOP superfamily Rhabdovirus nucleoprotein-like
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily AF0941-like
SCOP superfamily IpaD-like
SCOP superfamily SP0561-like
SCOP superfamily YoaC-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily YozE-like
SCOP superfamily EF2947-like
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily FlgN-like
SCOP superfamily TM0693-like
SCOP superfamily BAS1536-like
SCOP superfamily HP1531-like
SCOP superfamily PA2201 N-terminal domain-like
SCOP superfamily LemA-like
SCOP superfamily PE/PPE dimer-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily MW0975(SA0943)-like
SCOP superfamily YppE-like
SCOP superfamily ChaB-like
SCOP superfamily Coronavirus NSP7-like
SCOP superfamily IscX-like
SCOP superfamily MxiH-like
SCOP superfamily SPy1572-like
SCOP superfamily Synuclein
SCOP superfamily HSP33 redox switch-like
SCOP superfamily Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain
SCOP superfamily Connexin43
SCOP superfamily Proton glutamate symport protein
SCOP superfamily Viral ssDNA binding protein
SCOP superfamily Vacuolar ATP synthase subunit C
SCOP superfamily Phosphoprotein M1, C-terminal domain
SCOP superfamily CRISPR-associated protein
SCOP superfamily Flagellar hook protein flgE
SCOP superfamily CsrA-like
SCOP superfamily DNA primase DnaG, C-terminal domain
SCOP superfamily Hypothetical protein MPN330
SCOP superfamily YfbU-like
SCOP superfamily EspA/CesA-like
SCOP superfamily Hypothetical protein YqbG
SCOP superfamily XseB-like
SCOP superfamily TrkA C-terminal domain-like
SCOP superfamily Fzo-like conserved region
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily Geminin coiled-coil domain
SCOP superfamily Hormone receptor domain
SCOP superfamily OmpH-like
SCOP superfamily VP4 membrane interaction domain
SCOP superfamily HlyD-like secretion proteins
SCOP superfamily Mitochondrial ATP synthase coupling factor 6
SCOP superfamily Urocanase
SCOP superfamily Putative modulator of DNA gyrase, PmbA/TldD
SCOP superfamily Sulfolobus fructose-1,6-bisphosphatase-like
SCOP superfamily Hypothetical protein PF0899
SCOP superfamily Hypothetical protein MTH677
SCOP superfamily TTHA0583/YokD-like
SCOP superfamily Ctag/Cox11
SCOP superfamily Hypothetical protein MG354
SCOP superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
SCOP superfamily I/LWEQ domain
SCOP superfamily CAPPD, an extracellular domain of amyloid beta A4 protein
SCOP superfamily Bacteriocin immunity protein-like
SCOP superfamily Domain from hypothetical 2610208m17rik protein
SCOP superfamily Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
SCOP superfamily PhoU-like
SCOP superfamily KRAB domain (Kruppel-associated box)
SCOP superfamily DnaK suppressor protein DksA, alpha-hairpin domain
SCOP superfamily Proline/betaine transporter ProP, C-terminal cytoplasmic domain
SCOP superfamily G protein-binding domain
SCOP superfamily Plexin repeat
SCOP superfamily Bubble protein
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Antivirulence factor
SCOP superfamily 2-methylcitrate dehydratase PrpD
SCOP superfamily Hypothetical protein PH1602
SCOP superfamily Suppressor of Fused, N-terminal domain
SCOP superfamily Hypothetical protein HI1480
SCOP superfamily TT1751-like
SCOP superfamily MoaD-related protein, C-terminal domain
SCOP superfamily Sensory domain-like
SCOP superfamily OmpA-like
SCOP superfamily Nucleocapsid protein dimerization domain
SCOP superfamily CheC-like
SCOP superfamily Cell division protein ZapA-like
SCOP superfamily NIF3 (NGG1p interacting factor 3)-like
SCOP superfamily F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD)
SCOP superfamily DNA polymerase III psi subunit
SCOP superfamily Trimeric adhesin
SCOP superfamily Adhesin YadA, collagen-binding domain
SCOP superfamily Sema domain
SCOP superfamily Hydrophobin II, HfbII
SCOP superfamily Dextranase, N-terminal domain
SCOP superfamily Anti-sigma factor FlgM
SCOP superfamily Stathmin
SCOP superfamily Hypothetical protein ST1625
SCOP superfamily Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
SCOP superfamily Superantigen MAM
SCOP superfamily L27 domain
SCOP superfamily Methenyltetrahydrofolate cyclohydrolase-like
SCOP superfamily Flavivirus capsid protein C
SCOP superfamily KaiA/RbsU domain
SCOP superfamily Staphylocoagulase
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily B-form DNA mimic Ocr
SCOP superfamily Chemosensory protein Csp2
SCOP superfamily IP3 receptor type 1 binding core, domain 2
SCOP superfamily Kazal-type serine protease inhibitors

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.