SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > Genomes > Superfamily assignments for Astyanax mexicanus 76


Astyanax mexicanus 76 superfamily assignments

Taxonomy
Taxonomy browser entry

Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Otomorpha; Ostariophysi; Otophysi; Characiphysae; Characiformes; Characoidei; Characidae; Characidae incertae sedis; Astyanax clade; Astyanax; Astyanax mexicanus

Downloads
Fasta format sequences
Domain assignments

Jump to [ Top of page · Domain assignments ]

Assignment statistics

Sequences: 23698 total
17495 (74 %) with assignment
532 average length
44 % amino acid coverage
Domains: 35770 total
1072 unique superfamilies
1203 unique families
318 average length
33.4 average superfamily size
97 % formed by duplication
Domain combinations: 1461 domain pairs
5239 unique architectures

Jump to [ Top of page · Assignment statistics ]

Superfamily assignments

Domains

Proteins

Architectures

Families

SCOP link

Superfamilies
2780 539 180 1 SCOP 57667 beta-beta-alpha zinc fingers
1924 735 229 2 SCOP 48726 Immunoglobulin
1444 1212 258 13 SCOP 52540 P-loop containing nucleoside triphosphate hydrolases
989 138 50 1 SCOP 49313 Cadherin-like
838 321 169 1 SCOP 49265 Fibronectin type III
787 768 199 4 SCOP 56112 Protein kinase-like (PK-like)
752 239 194 0 SCOP 57196 EGF/Laminin
661 563 252 11 SCOP 50729 PH domain-like
616 598 32 1 SCOP 81321 Family A G protein-coupled receptor-like
546 416 149 8 SCOP 49899 Concanavalin A-like lectins/glucanases
447 385 57 5 SCOP 46689 Homeodomain-like
441 397 131 4 SCOP 57850 RING/U-box
427 365 100 15 SCOP 48371 ARM repeat
426 281 70 3 SCOP 54928 RNA-binding domain, RBD
398 58 51 1 SCOP 46966 Spectrin repeat
385 225 109 1 SCOP 50156 PDZ domain-like
384 221 61 2 SCOP 57716 Glucocorticoid receptor-like (DNA-binding domain)
369 283 134 1 SCOP 50044 SH3-domain
360 323 95 7 SCOP 47473 EF-hand
339 281 85 4 SCOP 52058 L domain-like
337 303 78 1 SCOP 50978 WD40 repeat-like
337 157 45 5 SCOP 56436 C-type lectin-like
320 208 88 2 SCOP 49562 C2 domain (Calcium/lipid-binding domain, CaLB)
318 277 114 1 SCOP 48403 Ankyrin repeat
301 202 34 0 SCOP 81324 Voltage-gated potassium channels
298 88 57 1 SCOP 82895 TSP-1 type 1 repeat
297 150 63 11 SCOP 81296 E set domains
293 73 59 0 SCOP 57424 LDL receptor-like module
289 195 75 2 SCOP 48452 TPR-like
284 174 117 1 SCOP 57184 Growth factor receptor domain
274 73 55 0 SCOP 57535 Complement control module/SCR domain
272 225 47 3 SCOP 52047 RNI-like
255 245 69 17 SCOP 46785 "Winged helix" DNA-binding domain
233 221 57 2 SCOP 54695 POZ domain
229 214 106 6 SCOP 54236 Ubiquitin-like
215 213 46 9 SCOP 51735 NAD(P)-binding Rossmann-fold domains
209 197 14 1 SCOP 103473 MFS general substrate transporter
200 158 77 3 SCOP 57903 FYVE/PHD zinc finger
193 129 70 4 SCOP 53300 vWA-like
184 71 56 1 SCOP 49854 Spermadhesin, CUB domain
174 148 62 3 SCOP 47769 SAM/Pointed domain
173 146 56 3 SCOP 52799 (Phosphotyrosine protein) phosphatases II
172 123 32 11 SCOP 52833 Thioredoxin-like
170 170 44 9 SCOP 54001 Cysteine proteinases
152 82 50 4 SCOP 63748 Tudor/PWWP/MBT
150 140 65 1 SCOP 55550 SH2 domain
146 140 24 17 SCOP 53335 S-adenosyl-L-methionine-dependent methyltransferases
145 141 16 13 SCOP 53474 alpha/beta-Hydrolases
140 140 14 1 SCOP 47459 HLH, helix-loop-helix DNA-binding domain
137 135 28 1 SCOP 57845 B-box zinc-binding domain
137 47 29 1 SCOP 56487 SRCR-like
132 71 18 5 SCOP 53067 Actin-like ATPase domain
130 52 27 1 SCOP 54791 Eukaryotic type KH-domain (KH-domain type I)
129 123 48 2 SCOP 50494 Trypsin-like serine proteases
126 126 73 2 SCOP 48350 GTPase activation domain, GAP
123 119 39 8 SCOP 55486 Metalloproteases ("zincins"), catalytic domain
122 99 60 11 SCOP 49785 Galactose-binding domain-like
115 58 19 1 SCOP 64593 Intermediate filament protein, coiled coil region
114 113 21 1 SCOP 53822 Periplasmic binding protein-like I
106 104 9 9 SCOP 53448 Nucleotide-diphospho-sugar transferases
106 105 31 4 SCOP 103657 BAR/IMD domain-like
105 77 42 5 SCOP 50249 Nucleic acid-binding proteins
105 101 58 1 SCOP 48065 DBL homology domain (DH-domain)
105 46 31 1 SCOP 57603 FnI-like domain
103 103 48 1 SCOP 47576 Calponin-homology domain, CH-domain
100 27 21 1 SCOP 90257 Myosin rod fragments
100 79 49 1 SCOP 57889 Cysteine-rich domain
97 85 18 1 SCOP 117281 Kelch motif
94 93 22 12 SCOP 56784 HAD-like
92 49 19 1 SCOP 47923 Ypt/Rab-GAP domain of gyp1p
89 83 40 3 SCOP 47986 DEATH domain
87 31 14 2 SCOP 55753 Actin depolymerizing proteins
86 55 42 0 SCOP 51045 WW domain
85 85 6 5 SCOP 57501 Cystine-knot cytokines
83 54 16 3 SCOP 55785 PYP-like sensor domain (PAS domain)
83 49 14 3 SCOP 47954 Cyclin-like
81 80 37 4 SCOP 53098 Ribonuclease H-like
81 80 5 1 SCOP 48264 Cytochrome P450
80 66 18 1 SCOP 47095 HMG-box
78 76 5 1 SCOP 49842 TNF-like
77 70 26 9 SCOP 51445 (Trans)glycosidases
75 74 7 1 SCOP 48508 Nuclear receptor ligand-binding domain
73 56 21 1 SCOP 51206 cAMP-binding domain-like
72 72 10 1 SCOP 57959 Leucine zipper domain
71 63 27 4 SCOP 51905 FAD/NAD(P)-binding domain
71 25 12 1 SCOP 141072 CalX-like
71 51 29 1 SCOP 47370 Bromodomain
70 68 34 1 SCOP 47031 Second domain of FERM
67 66 7 1 SCOP 90112 Neurotransmitter-gated ion-channel transmembrane pore
67 65 6 0 SCOP 63712 Nicotinic receptor ligand binding domain-like
66 66 7 1 SCOP 103506 Mitochondrial carrier
66 64 15 3 SCOP 54495 UBC-like
66 60 35 1 SCOP 46934 UBA-like
64 64 29 1 SCOP 64268 PX domain
64 64 27 2 SCOP 49879 SMAD/FHA domain
62 32 29 1 SCOP 63825 YWTD domain
62 61 17 6 SCOP 49417 p53-like transcription factors
62 47 28 1 SCOP 100895 Kazal-type serine protease inhibitors
61 61 26 1 SCOP 81383 F-box domain
61 34 21 2 SCOP 54768 dsRNA-binding domain-like
60 56 30 0 SCOP 103575 Plexin repeat
60 35 26 2 SCOP 57440 Kringle-like
59 59 26 1 SCOP 46565 Chaperone J-domain
59 56 24 1 SCOP 48097 Regulator of G-protein signaling, RGS
59 32 21 1 SCOP 69179 Integrin domains
58 53 20 6 SCOP 53187 Zn-dependent exopeptidases
58 42 10 1 SCOP 49695 gamma-Crystallin-like
57 57 33 1 SCOP 82199 SET domain
57 57 29 1 SCOP 101912 Sema domain
56 38 22 1 SCOP 90229 CCCH zinc finger
56 15 15 0 SCOP 57567 Serine protease inhibitors
55 25 8 2 SCOP 49503 Cupredoxins
55 38 11 0 SCOP 90123 ABC transporter transmembrane region
54 54 15 1 SCOP 81665 Calcium ATPase, transmembrane domain M
52 51 18 3 SCOP 51197 Clavaminate synthase-like
51 46 13 3 SCOP 55729 Acyl-CoA N-acyltransferases (Nat)
50 20 10 1 SCOP 49723 Lipase/lipooxygenase domain (PLAT/LH2 domain)
49 46 13 2 SCOP 47113 Histone-fold
49 24 9 0 SCOP 57586 TNF receptor-like
48 44 23 1 SCOP 56399 ADP-ribosylation
48 36 15 1 SCOP 55073 Nucleotide cyclase
48 47 14 1 SCOP 56496 Fibrinogen C-terminal domain-like
48 35 20 2 SCOP 54160 Chromo domain-like
48 30 20 0 SCOP 57362 BPTI-like
47 47 6 1 SCOP 54452 MHC antigen-recognition domain
46 43 14 2 SCOP 53850 Periplasmic binding protein-like II
46 44 6 1 SCOP 53756 UDP-Glycosyltransferase/glycogen phosphorylase
46 46 3 0 SCOP 48652 Tetraspanin
46 32 25 2 SCOP 49599 TRAF domain-like
45 44 6 6 SCOP 53383 PLP-dependent transferases
45 45 3 1 SCOP 161070 SNF-like
44 40 17 1 SCOP 57997 Tropomyosin
43 35 10 1 SCOP 56801 Acetyl-CoA synthetase-like
42 42 14 2 SCOP 51695 PLC-like phosphodiesterases
42 41 8 4 SCOP 56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
42 40 6 2 SCOP 53649 Alkaline phosphatase-like
42 42 21 1 SCOP 56204 Hect, E3 ligase catalytic domain
41 40 11 5 SCOP 56300 Metallo-dependent phosphatases
41 33 11 2 SCOP 47413 lambda repressor-like DNA-binding domains
41 41 11 2 SCOP 56219 DNase I-like
40 40 19 1 SCOP 48366 Ras GEF
40 40 15 1 SCOP 101447 Formin homology 2 domain (FH2 domain)
40 10 10 1 SCOP 75399 Plakin repeat
39 38 21 6 SCOP 54211 Ribosomal protein S5 domain 2-like
39 26 23 2 SCOP 52113 BRCT domain
39 31 17 0 SCOP 57756 Retrovirus zinc finger-like domains
38 38 24 3 SCOP 52374 Nucleotidylyl transferase
38 32 14 1 SCOP 58038 SNARE fusion complex
38 38 10 2 SCOP 109604 HD-domain/PDEase-like
38 19 13 1 SCOP 49299 PKD domain
38 33 11 1 SCOP 57302 Snake toxin-like
38 38 13 0 SCOP 158235 SOCS box-like
38 9 8 1 SCOP 57581 TB module/8-cys domain
37 35 18 4 SCOP 56059 Glutathione synthetase ATP-binding domain-like
37 37 9 1 SCOP 81660 Metal cation-transporting ATPase, ATP-binding domain N
37 37 11 3 SCOP 48464 ENTH/VHS domain
37 37 11 1 SCOP 81653 Calcium ATPase, transduction domain A
37 8 7 1 SCOP 103637 CCHHC domain
36 35 16 2 SCOP 50447 Translation proteins
36 33 24 0 SCOP 50998 Quinoprotein alcohol dehydrogenase-like
36 31 7 0 SCOP 103481 Multidrug resistance efflux transporter EmrE
36 32 14 1 SCOP 50923 Hemopexin-like domain
36 12 10 2 SCOP 47220 alpha-catenin/vinculin-like
35 33 10 3 SCOP 49764 HSP20-like chaperones
35 28 14 1 SCOP 50985 RCC1/BLIP-II
35 35 13 1 SCOP 47616 GST C-terminal domain-like
34 26 11 4 SCOP 52096 ClpP/crotonase
34 34 17 4 SCOP 56672 DNA/RNA polymerases
34 24 9 1 SCOP 56024 Phospholipase D/nuclease
34 34 20 1 SCOP 57863 ArfGap/RecO-like zinc finger
33 33 16 3 SCOP 50242 TIMP-like
33 20 8 2 SCOP 52777 CoA-dependent acyltransferases
33 33 4 1 SCOP 50353 Cytokine
32 22 11 1 SCOP 54534 FKBP-like
32 32 11 3 SCOP 55961 Bet v1-like
32 27 11 1 SCOP 54631 CBS-domain pair
32 32 4 2 SCOP 50814 Lipocalins
32 21 12 0 SCOP 57610 Thyroglobulin type-1 domain
31 26 8 1 SCOP 50129 GroES-like
31 25 19 1 SCOP 117839 WWE domain
30 30 9 4 SCOP 64356 SNARE-like
30 28 15 3 SCOP 55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
30 29 10 1 SCOP 68906 SAP domain
30 30 4 1 SCOP 47266 4-helical cytokines
29 29 9 6 SCOP 51556 Metallo-dependent hydrolases
29 29 18 1 SCOP 69318 Integrin alpha N-terminal domain
29 29 9 2 SCOP 50370 Ricin B-like lectins
28 28 2 0 SCOP 48317 Acid phosphatase/Vanadium-dependent haloperoxidase
28 21 15 0 SCOP 90209 Ran binding protein zinc finger-like
28 27 8 1 SCOP 111418 Hormone receptor domain
28 27 7 1 SCOP 63501 Frizzled cysteine-rich domain
27 27 8 1 SCOP 81606 PP2C-like
27 27 17 1 SCOP 52200 Toll/Interleukin receptor TIR domain
27 15 9 1 SCOP 82185 Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
27 27 6 1 SCOP 47661 t-snare proteins
27 5 4 0 SCOP 57277 Granulin repeat
26 26 7 1 SCOP 55811 Nudix
26 26 7 3 SCOP 53254 Phosphoglycerate mutase-like
26 5 4 0 SCOP 82153 FAS1 domain
26 11 5 1 SCOP 63411 LuxS/MPP-like metallohydrolase
26 26 4 1 SCOP 56574 Serpins
26 25 5 1 SCOP 52490 Tubulin nucleotide-binding domain-like
26 14 3 0 SCOP 82866 Multidrug efflux transporter AcrB transmembrane domain
26 26 6 0 SCOP 47454 A DNA-binding domain in eukaryotic transcription factors
25 15 8 5 SCOP 52518 Thiamin diphosphate-binding fold (THDP-binding)
25 25 18 2 SCOP 55681 Class II aaRS and biotin synthetases
25 25 7 2 SCOP 54060 His-Me finger endonucleases
25 17 13 1 SCOP 81901 HCP-like
25 25 15 0 SCOP 144232 HIT/MYND zinc finger-like
25 15 11 1 SCOP 74924 Cap-Gly domain
25 10 6 1 SCOP 50911 Mannose 6-phosphate receptor domain
25 13 6 0 SCOP 49493 HSP40/DnaJ peptide-binding domain
24 20 6 2 SCOP 53271 PRTase-like
24 22 9 3 SCOP 52821 Rhodanese/Cell cycle control phosphatase
24 14 12 2 SCOP 52949 Macro domain-like
24 24 9 1 SCOP 52129 Caspase-like
24 24 4 1 SCOP 55307 Tubulin C-terminal domain-like
24 24 18 1 SCOP 52087 CRAL/TRIO domain
24 23 3 1 SCOP 47895 Transducin (alpha subunit), insertion domain
23 22 7 3 SCOP 56104 SAICAR synthase-like
23 22 3 1 SCOP 46458 Globin-like
23 8 7 1 SCOP 103647 TSP type-3 repeat
23 23 13 1 SCOP 54277 CAD & PB1 domains
23 18 11 1 SCOP 101288 L27 domain
22 22 3 1 SCOP 81338 Aquaporin-like
22 22 13 0 SCOP 111331 NAD kinase/diacylglycerol kinase-like
22 21 4 1 SCOP 51430 NAD(P)-linked oxidoreductase
22 20 13 3 SCOP 48239 Terpenoid cyclases/Protein prenyltransferases
22 16 4 1 SCOP 54403 Cystatin/monellin
22 18 16 0 SCOP 49464 Carboxypeptidase regulatory domain-like
22 16 11 1 SCOP 82109 MIR domain
22 20 16 0 SCOP 82671 SEA domain
22 20 13 1 SCOP 140741 RUN domain-like
21 20 11 2 SCOP 52317 Class I glutamine amidotransferase-like
21 21 7 2 SCOP 55315 L30e-like
21 20 7 1 SCOP 144000 Oxysterol-binding protein-like
21 21 12 2 SCOP 52151 FabD/lysophospholipase-like
21 19 9 1 SCOP 51069 Carbonic anhydrase
21 21 6 1 SCOP 47090 PGBD-like
21 21 10 1 SCOP 46774 ARID-like
21 21 9 1 SCOP 48425 Sec7 domain
21 21 2 0 SCOP 57552 Blood coagulation inhibitor (disintegrin)
20 20 5 0 SCOP 69593 Glycerol-3-phosphate (1)-acyltransferase
20 20 4 2 SCOP 56281 Metallo-hydrolase/oxidoreductase
20 20 4 2 SCOP 50182 Sm-like ribonucleoproteins
20 19 9 1 SCOP 50630 Acid proteases
20 13 7 1 SCOP 53901 Thiolase-like
19 17 6 4 SCOP 100950 NagB/RpiA/CoA transferase-like
19 18 5 1 SCOP 53720 ALDH-like
19 19 9 1 SCOP 50891 Cyclophilin-like
19 19 14 3 SCOP 88697 PUA domain-like
19 16 7 2 SCOP 48179 6-phosphogluconate dehydrogenase C-terminal domain-like
19 17 17 1 SCOP 101898 NHL repeat
19 19 9 3 SCOP 54373 FAD-linked reductases, C-terminal domain
19 19 3 1 SCOP 56854 Bcl-2 inhibitors of programmed cell death
19 18 9 1 SCOP 49758 Calpain large subunit, middle domain (domain III)
18 18 9 3 SCOP 54427 NTF2-like
18 10 5 1 SCOP 55781 GAF domain-like
18 17 5 2 SCOP 52768 Arginase/deacetylase
18 6 1 1 SCOP 55973 S-adenosylmethionine synthetase
18 18 2 2 SCOP 90250 Troponin coil-coiled subunits
18 18 10 0 SCOP 57630 GLA-domain
18 13 9 0 SCOP 90188 Somatomedin B domain
18 10 4 1 SCOP 49309 Transglutaminase, two C-terminal domains
17 17 3 4 SCOP 51569 Aldolase
17 16 11 3 SCOP 81301 Nucleotidyltransferase
17 17 2 1 SCOP 55804 Phoshotransferase/anion transport protein
17 17 11 2 SCOP 52343 Ferredoxin reductase-like, C-terminal NADP-linked domain
17 17 3 1 SCOP 117892 Band 7/SPFH domain
17 17 3 1 SCOP 48670 Transducin (heterotrimeric G protein), gamma chain
17 10 7 1 SCOP 89837 Doublecortin (DC)
17 10 7 1 SCOP 56968 Lipovitellin-phosvitin complex; beta-sheet shell regions
16 8 6 0 SCOP 47060 S15/NS1 RNA-binding domain
16 15 7 2 SCOP 55931 Glutamine synthetase/guanido kinase
16 15 10 2 SCOP 57783 Zinc beta-ribbon
16 11 6 0 SCOP 51338 Composite domain of metallo-dependent hydrolases
16 12 7 2 SCOP 47203 Acyl-CoA dehydrogenase C-terminal domain-like
16 8 4 1 SCOP 54980 EF-G C-terminal domain-like
16 14 10 3 SCOP 52440 PreATP-grasp domain
16 16 9 1 SCOP 51011 Glycosyl hydrolase domain
16 16 10 2 SCOP 63380 Riboflavin synthase domain-like
16 7 5 1 SCOP 53738 Phosphoglucomutase, first 3 domains
16 15 3 1 SCOP 47874 Annexin
16 16 6 1 SCOP 111347 Rap/Ran-GAP
16 14 9 1 SCOP 116846 MIT domain
16 16 6 1 SCOP 49447 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
16 6 5 1 SCOP 109885 I/LWEQ domain
16 8 5 1 SCOP 46585 HR1 repeat
15 15 5 2 SCOP 50104 Translation proteins SH3-like domain
15 6 4 1 SCOP 53784 Phosphofructokinase
15 15 7 1 SCOP 88723 PIN domain-like
15 15 7 0 SCOP 46579 Prefoldin
15 7 5 1 SCOP 55008 HMA, heavy metal-associated domain
15 13 4 0 SCOP 58113 Apolipoprotein A-I
15 15 8 1 SCOP 52954 Class II aaRS ABD-related
15 14 9 1 SCOP 51230 Single hybrid motif
15 13 6 1 SCOP 55797 PR-1-like
15 15 7 4 SCOP 52467 DHS-like NAD/FAD-binding domain
15 14 8 2 SCOP 56645 Acyl-CoA dehydrogenase NM domain-like
15 15 4 1 SCOP 50465 EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
15 15 5 4 SCOP 55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
15 15 7 1 SCOP 63737 Leukotriene A4 hydrolase N-terminal domain
15 12 5 1 SCOP 100934 Heat shock protein 70kD (HSP70), C-terminal subdomain
15 14 4 0 SCOP 54117 Interleukin 8-like chemokines
15 15 8 1 SCOP 47391 Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
15 15 6 1 SCOP 52025 PA domain
14 14 9 1 SCOP 55920 Creatinase/aminopeptidase
14 14 3 2 SCOP 47240 Ferritin-like
14 10 7 3 SCOP 54637 Thioesterase/thiol ester dehydrase-isomerase
14 12 5 2 SCOP 69572 Activating enzymes of the ubiquitin-like proteins
14 14 8 2 SCOP 54897 Protease propeptides/inhibitors
14 13 6 3 SCOP 48208 Six-hairpin glycosidases
14 13 5 1 SCOP 52266 SGNH hydrolase
14 14 8 0 SCOP 144091 Rhomboid-like
14 13 6 2 SCOP 46955 Putative DNA-binding domain
14 13 3 1 SCOP 81340 Clc chloride channel
14 13 3 1 SCOP 54518 Tubby C-terminal domain-like
14 14 3 1 SCOP 118215 Proton glutamate symport protein
14 14 6 1 SCOP 82171 DPP6 N-terminal domain-like
14 14 11 1 SCOP 52743 Subtilisin-like
14 12 9 0 SCOP 81995 beta-sandwich domain of Sec23/24
14 14 6 1 SCOP 74788 Cullin repeat-like
14 14 11 1 SCOP 109993 VPS9 domain
14 10 8 0 SCOP 63451 LEM domain
14 6 6 0 SCOP 47862 Saposin
14 6 3 1 SCOP 47762 PAH2 domain
14 10 8 1 SCOP 100909 IP3 receptor type 1 binding core, domain 2
14 6 6 0 SCOP 90193 Notch domain
14 14 3 1 SCOP 158457 Orange domain-like
13 13 4 2 SCOP 53613 Ribokinase-like
13 11 7 3 SCOP 54197 HIT-like
13 13 4 1 SCOP 55120 Pseudouridine synthase
13 6 5 0 SCOP 51126 Pectin lyase-like
13 13 7 2 SCOP 52283 Formate/glycerate dehydrogenase catalytic domain-like
13 11 10 0 SCOP 47781 RuvA domain 2-like
13 13 10 1 SCOP 47323 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
13 13 7 1 SCOP 54171 DNA-binding domain
13 12 8 0 SCOP 52075 Outer arm dynein light chain 1
13 11 5 1 SCOP 118310 AN1-like Zinc finger
13 13 8 0 SCOP 49410 Alpha-macroglobulin receptor domain
13 9 7 0 SCOP 57256 Elafin-like
13 13 5 2 SCOP 63763 SAND domain-like
13 13 3 2 SCOP 89009 GAT-like domain
12 12 11 2 SCOP 52402 Adenine nucleotide alpha hydrolases-like
12 8 7 1 SCOP 54919 Nucleoside diphosphate kinase, NDK
12 12 9 0 SCOP 161111 Cation efflux protein transmembrane domain-like
12 11 5 1 SCOP 48173 Cryptochrome/photolyase FAD-binding domain
12 12 6 1 SCOP 48592 GroEL equatorial domain-like
12 4 3 1 SCOP 50405 Actin-crosslinking proteins
12 12 5 1 SCOP 100920 Heat shock protein 70kD (HSP70), peptide-binding domain
12 11 7 1 SCOP 81631 PAP/OAS1 substrate-binding domain
12 12 8 1 SCOP 46938 CRAL/TRIO N-terminal domain
12 12 6 1 SCOP 101576 Supernatant protein factor (SPF), C-terminal domain
12 12 6 3 SCOP 49348 Clathrin adaptor appendage domain
12 12 4 1 SCOP 56366 SMAD MH1 domain
12 12 1 1 SCOP 48445 14-3-3 protein
12 12 9 1 SCOP 82754 C-terminal, gelsolin-like domain of Sec23/24
12 4 3 1 SCOP 81698 FF domain
12 12 9 0 SCOP 140996 Hermes dimerisation domain
11 11 5 1 SCOP 52425 Cryptochrome/photolyase, N-terminal domain
11 11 9 0 SCOP 50969 YVTN repeat-like/Quinoprotein amine dehydrogenase
11 11 9 0 SCOP 69322 Tricorn protease domain 2
11 10 9 0 SCOP 50965 Galactose oxidase, central domain
11 11 5 2 SCOP 52029 GroEL apical domain-like
11 11 8 1 SCOP 82708 R3H domain
11 11 1 1 SCOP 101152 Mob1/phocein
11 6 6 1 SCOP 57924 Inhibitor of apoptosis (IAP) repeat
11 5 4 1 SCOP 63491 BAG domain
11 11 8 1 SCOP 47050 VHP, Villin headpiece domain
11 9 7 1 SCOP 69848 LCCL domain
10 9 4 2 SCOP 53927 Cytidine deaminase-like
10 10 5 0 SCOP 57829 Zn-binding ribosomal proteins
10 10 8 2 SCOP 52218 Flavoproteins
10 9 8 0 SCOP 110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
10 10 9 2 SCOP 74650 Galactose mutarotase-like
10 10 5 1 SCOP 55856 Cytochrome b5-like heme/steroid binding domain
10 10 2 0 SCOP 52091 SpoIIaa-like
10 6 3 0 SCOP 54909 Dimeric alpha+beta barrel
10 8 4 0 SCOP 55021 ACT-like
10 10 4 1 SCOP 69989 C-terminal domain of PLC-beta
10 5 2 0 SCOP 161093 MgtE membrane domain-like
10 10 10 1 SCOP 81837 BEACH domain
10 10 1 1 SCOP 160696 BTG domain-like
10 10 5 1 SCOP 47676 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
10 10 4 2 SCOP 144074 E2F-DP heterodimerization region
10 10 6 1 SCOP 75632 Cullin homology domain
10 8 6 1 SCOP 143791 DUSP-like
10 10 7 1 SCOP 69687 Integrin beta tail domain
9 9 6 2 SCOP 54292 2Fe-2S ferredoxin-like
9 9 6 1 SCOP 102114 Radical SAM enzymes
9 9 2 1 SCOP 56655 Carbohydrate phosphatase
9 9 8 0 SCOP 101908 Putative isomerase YbhE
9 9 2 1 SCOP 56815 Sec1/munc18-like (SM) proteins
9 9 6 1 SCOP 47027 Acyl-CoA binding protein
9 8 4 5 SCOP 51182 RmlC-like cupins
9 9 6 1 SCOP 48113 Heme-dependent peroxidases
9 9 2 2 SCOP 53955 Lysozyme-like
9 6 6 0 SCOP 49452 Starch-binding domain-like
9 9 3 1 SCOP 55136 Probable bacterial effector-binding domain
9 9 6 3 SCOP 53223 Aminoacid dehydrogenase-like, N-terminal domain
9 7 7 1 SCOP 160481 BRK domain-like
9 9 5 1 SCOP 48225 Seven-hairpin glycosidases
9 9 6 1 SCOP 48431 Lipovitellin-phosvitin complex, superhelical domain
9 5 4 1 SCOP 49742 PHM/PNGase F
9 9 3 1 SCOP 56994 Insulin-like
9 4 2 1 SCOP 55394 Bactericidal permeability-increasing protein, BPI
9 6 5 1 SCOP 109905 Surp module (SWAP domain)
9 9 3 2 SCOP 103243 KA1-like
9 9 3 0 SCOP 54849 GroEL-intermediate domain like
9 9 2 1 SCOP 48034 Guanido kinase N-terminal domain
9 8 3 1 SCOP 110035 GDNF receptor-like
8 8 4 2 SCOP 53137 Translational machinery components
8 5 3 0 SCOP 81333 F1F0 ATP synthase subunit C
8 8 2 2 SCOP 64484 beta and beta-prime subunits of DNA dependent RNA-polymerase
8 8 5 1 SCOP 51395 FMN-linked oxidoreductases
8 7 3 2 SCOP 48576 Terpenoid synthases
8 6 2 1 SCOP 69645 Arp2/3 complex subunits
8 8 3 1 SCOP 111126 Ligand-binding domain in the NO signalling and Golgi transport
8 8 3 1 SCOP 143113 NAP-like
8 8 2 1 SCOP 161084 MAPEG domain-like
8 8 5 1 SCOP 56601 beta-lactamase/transpeptidase-like
8 8 5 0 SCOP 102712 JAB1/MPN domain
8 8 2 2 SCOP 54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
8 8 2 1 SCOP 48484 Lipoxigenase
8 7 7 1 SCOP 56176 FAD-binding/transporter-associated domain-like
8 8 3 1 SCOP 48619 Phospholipase A2, PLA2
8 8 5 1 SCOP 48019 post-AAA+ oligomerization domain-like
8 8 2 1 SCOP 56327 LDH C-terminal domain-like
8 6 6 1 SCOP 158702 Sec63 N-terminal domain-like
8 8 1 1 SCOP 101494 Stathmin
8 8 4 1 SCOP 48092 Transcription factor STAT-4 N-domain
8 8 3 1 SCOP 101690 PAZ domain
8 8 4 1 SCOP 48340 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
8 8 3 1 SCOP 144292 occludin/ELL-like
8 8 6 1 SCOP 143575 GAS2 domain-like
8 8 4 1 SCOP 47655 STAT
8 8 4 1 SCOP 158553 TAFH domain-like
8 5 4 1 SCOP 82615 Polo-box domain
7 7 2 3 SCOP 51316 Mss4-like
7 7 6 1 SCOP 53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes
7 5 3 1 SCOP 51412 Inosine monophosphate dehydrogenase (IMPDH)
7 7 1 2 SCOP 55418 eIF4e-like
7 7 1 0 SCOP 111352 Ammonium transporter
7 7 7 1 SCOP 50022 ISP domain
7 7 3 2 SCOP 51604 Enolase C-terminal domain-like
7 6 2 1 SCOP 50939 Sialidases
7 7 3 1 SCOP 47592 SWIB/MDM2 domain
7 7 7 1 SCOP 55424 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
7 7 5 1 SCOP 51246 Rudiment single hybrid motif
7 7 4 0 SCOP 57938 DnaJ/Hsp40 cysteine-rich domain
7 7 3 1 SCOP 54826 Enolase N-terminal domain-like
7 7 4 3 SCOP 55060 GHMP Kinase, C-terminal domain
7 4 3 2 SCOP 55945 TATA-box binding protein-like
7 7 4 0 SCOP 57492 Trefoil
7 7 3 1 SCOP 69012 alpha-ketoacid dehydrogenase kinase, N-terminal domain
7 7 3 1 SCOP 47672 Transferrin receptor-like dimerisation domain
7 7 1 1 SCOP 116907 Hook domain
7 2 2 0 SCOP 57262 Leech antihemostatic proteins
7 7 5 0 SCOP 47686 Anaphylotoxins (complement system)
7 7 4 0 SCOP 75553 Smc hinge domain
7 6 3 1 SCOP 55666 Ribonuclease PH domain 2-like
7 4 4 1 SCOP 47912 Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
7 7 1 1 SCOP 118220 Connexin43
7 7 3 0 SCOP 46942 Elongation factor TFIIS domain 2
7 7 4 1 SCOP 63887 P-domain of calnexin/calreticulin
7 7 4 0 SCOP 144270 Eferin C-derminal domain-like
7 7 5 1 SCOP 81811 Helical domain of Sec23/24
7 7 5 0 SCOP 82919 Zn-finger domain of Sec23/24
6 6 1 1 SCOP 53167 Purine and uridine phosphorylases
6 6 4 0 SCOP 47336 ACP-like
6 6 1 1 SCOP 53659 Isocitrate/Isopropylmalate dehydrogenase-like
6 6 4 1 SCOP 75217 alpha/beta knot
6 6 2 2 SCOP 48557 L-aspartase-like
6 6 5 2 SCOP 54862 4Fe-4S ferredoxins
6 6 4 1 SCOP 56317 Carbon-nitrogen hydrolase
6 6 4 0 SCOP 53639 AraD/HMP-PK domain-like
6 6 6 1 SCOP 88713 Glycoside hydrolase/deacetylase
6 6 3 0 SCOP 141571 Pentapeptide repeat-like
6 6 5 1 SCOP 55718 SCP-like
6 6 2 1 SCOP 56534 Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
6 6 3 3 SCOP 100939 SPOC domain-like
6 6 2 1 SCOP 50346 PRC-barrel domain
6 5 3 1 SCOP 55979 DNA clamp
6 4 4 0 SCOP 159034 Mib/herc2 domain-like
6 6 2 0 SCOP 56973 Aerolisin/ETX pore-forming domain
6 6 6 1 SCOP 50677 ValRS/IleRS/LeuRS editing domain
6 3 1 0 SCOP 57288 Midkine
6 6 2 1 SCOP 55455 SRF-like
6 6 2 1 SCOP 81601 Protein serine/threonine phosphatase 2C, C-terminal domain
6 3 1 0 SCOP 57190 Colipase-like
6 6 3 0 SCOP 110942 HSP90 C-terminal domain
6 6 3 0 SCOP 140111 Endosomal sorting complex assembly domain
6 6 3 1 SCOP 54556 Chitinase insertion domain
6 6 1 1 SCOP 48678 Moesin tail domain
6 6 2 1 SCOP 55277 GYF domain
6 6 5 1 SCOP 69125 Nuclear receptor coactivator interlocking domain
5 5 3 2 SCOP 52141 Uracil-DNA glycosylase-like
5 5 3 2 SCOP 53697 SIS domain
5 5 4 1 SCOP 52980 Restriction endonuclease-like
5 5 4 1 SCOP 51419 PLP-binding barrel
5 5 4 1 SCOP 63829 Calcium-dependent phosphotriesterase
5 5 2 1 SCOP 144122 Tim10-like
5 5 4 1 SCOP 55144 LigT-like
5 5 5 2 SCOP 47819 HRDC-like
5 5 3 1 SCOP 49329 Cu,Zn superoxide dismutase-like
5 5 2 0 SCOP 47072 Cysteine alpha-hairpin motif
5 5 2 3 SCOP 55909 Pentein
5 4 3 2 SCOP 55620 Tetrahydrobiopterin biosynthesis enzymes-like
5 5 3 1 SCOP 50692 ADC-like
5 5 1 1 SCOP 55166 Hedgehog/DD-peptidase
5 5 3 1 SCOP 110857 Gamma-glutamyl cyclotransferase-like
5 3 2 2 SCOP 53218 Molybdenum cofactor biosynthesis proteins
5 5 3 1 SCOP 50800 PK beta-barrel domain-like
5 5 3 1 SCOP 103025 Folate-binding domain
5 5 5 1 SCOP 56091 DNA ligase/mRNA capping enzyme, catalytic domain
5 2 2 0 SCOP 50199 Staphylococcal nuclease
5 5 1 1 SCOP 58026 Delta-sleep-inducing peptide immunoreactive peptide
5 5 3 1 SCOP 52922 TK C-terminal domain-like
5 5 2 0 SCOP 48056 Di-copper centre-containing domain
5 5 5 0 SCOP 48334 DNA repair protein MutS, domain III
5 5 2 1 SCOP 140990 FtsH protease domain-like
5 5 1 0 SCOP 51294 Hedgehog/intein (Hint) domain
5 4 3 1 SCOP 56042 PurM C-terminal domain-like
5 4 3 1 SCOP 55326 PurM N-terminal domain-like
5 5 2 1 SCOP 49354 PapD-like
5 5 2 0 SCOP 57625 Invertebrate chitin-binding proteins
5 5 3 1 SCOP 81271 TGS-like
5 5 3 0 SCOP 55048 Probable ACP-binding domain of malonyl-CoA ACP transacylase
5 5 1 1 SCOP 51092 Vitelline membrane outer protein-I (VMO-I)
5 2 2 1 SCOP 48552 Serum albumin-like
5 5 5 0 SCOP 47353 Retrovirus capsid dimerization domain-like
5 5 3 1 SCOP 110004 Glycolipid transfer protein, GLTP
5 5 5 1 SCOP 88688 Families 57/38 glycoside transferase middle domain
5 5 1 0 SCOP 63724 Cytolysin/lectin
5 5 4 0 SCOP 82927 Cysteine-rich DNA binding domain, (DM domain)
5 5 1 0 SCOP 118370 Vasodilator-stimulated phosphoprotein, VASP, tetramerisation domain
5 5 5 1 SCOP 143503 PUG domain-like
5 5 3 1 SCOP 102031 AXH domain
5 5 3 1 SCOP 89811 Amyloid beta a4 protein copper binding domain (domain 2)
5 5 2 2 SCOP 55711 Subdomain of clathrin and coatomer appendage domain
5 5 3 1 SCOP 54585 Cdc48 domain 2-like
5 5 3 1 SCOP 56491 A heparin-binding domain
5 5 3 1 SCOP 109843 CAPPD, an extracellular domain of amyloid beta A4 protein
5 5 4 1 SCOP 47802 DNA polymerase beta, N-terminal domain-like
5 1 1 0 SCOP 117773 GTF2I-like repeat
5 5 5 0 SCOP 58006 Assembly domain of cartilage oligomeric matrix protein
5 5 4 1 SCOP 103652 G protein-binding domain
5 5 1 1 SCOP 140482 MAST3 pre-PK domain-like
4 4 3 0 SCOP 56808 Ribosomal protein L1
4 4 2 1 SCOP 75304 Amidase signature (AS) enzymes
4 4 1 1 SCOP 54189 Ribosomal proteins S24e, L23 and L15e
4 4 3 1 SCOP 46946 S13-like H2TH domain
4 4 3 0 SCOP 110324 Ribosomal L27 protein-like
4 4 3 0 SCOP 55174 Alpha-L RNA-binding motif
4 4 2 1 SCOP 51730 FAD-linked oxidoreductase
4 4 4 2 SCOP 48150 DNA-glycosylase
4 4 2 1 SCOP 51621 Phosphoenolpyruvate/pyruvate domain
4 4 2 1 SCOP 48613 Heme oxygenase-like
4 4 3 1 SCOP 53328 Formyltransferase
4 4 1 1 SCOP 54648 DLC
4 4 1 1 SCOP 69103 Arp2/3 complex 16 kDa subunit ARPC5
4 4 2 1 SCOP 56019 The spindle assembly checkpoint protein mad2
4 4 4 1 SCOP 48439 Protein prenylyltransferase
4 4 2 1 SCOP 49777 PEBP-like
4 4 2 0 SCOP 55257 RBP11-like subunits of RNA polymerase
4 4 2 1 SCOP 64153 YjeF N-terminal domain-like
4 4 1 0 SCOP 101478 ADP-ribosylglycohydrolase
4 4 2 1 SCOP 52016 LeuD/IlvD-like
4 4 2 1 SCOP 117916 Fe-S cluster assembly (FSCA) domain-like
4 4 2 1 SCOP 53732 Aconitase iron-sulfur domain
4 4 2 1 SCOP 50993 Peptidase/esterase 'gauge' domain
4 3 3 0 SCOP 69065 RNase III domain-like
4 4 3 0 SCOP 50952 Soluble quinoprotein glucose dehydrogenase
4 4 1 1 SCOP 103196 Roadblock/LC7 domain
4 4 3 1 SCOP 55186 ThrRS/AlaRS common domain
4 4 4 0 SCOP 53092 Creatinase/prolidase N-terminal domain
4 3 3 1 SCOP 56003 Molybdenum cofactor-binding domain
4 4 3 1 SCOP 51690 Nicotinate/Quinolinate PRTase C-terminal domain-like
4 4 1 0 SCOP 54106 LysM domain
4 4 4 0 SCOP 58104 Methyl-accepting chemotaxis protein (MCP) signaling domain
4 4 2 1 SCOP 142877 EndoU-like
4 4 3 2 SCOP 51971 Nucleotide-binding domain
4 4 3 1 SCOP 52210 Succinyl-CoA synthetase domains
4 3 3 1 SCOP 53671 Aspartate/ornithine carbamoyltransferase
4 4 4 1 SCOP 74853 Lamin A/C globular tail domain
4 4 3 0 SCOP 81585 PsbU/PolX domain-like
4 4 4 0 SCOP 160240 Cation efflux protein cytoplasmic domain-like
4 4 3 1 SCOP 100879 Lesion bypass DNA polymerase (Y-family), little finger domain
4 4 2 0 SCOP 75689 Zinc-binding domain of translation initiation factor 2 beta
4 4 2 0 SCOP 100966 Translation initiation factor 2 beta, aIF2beta, N-terminal domain
4 4 3 1 SCOP 55957 Phosphoglucomutase, C-terminal domain
4 4 1 0 SCOP 55031 Bacterial exopeptidase dimerisation domain
4 4 3 1 SCOP 50615 N-terminal domain of alpha and beta subunits of F1 ATP synthase
4 4 2 1 SCOP 81790 Myosin phosphatase inhibitor 17kDa protein, CPI-17
4 4 2 1 SCOP 63570 PABC (PABP) domain
4 4 2 1 SCOP 118375 Synuclein
4 4 2 1 SCOP 47216 Proteasome activator
4 4 2 0 SCOP 103107 Hypothetical protein c14orf129, hspc210
4 4 2 0 SCOP 57414 Hairpin loop containing domain-like
4 4 3 0 SCOP 54368 Glutamine synthetase, N-terminal domain
4 4 2 1 SCOP 49606 Neurophysin II
4 4 4 1 SCOP 54511 GFP-like
4 4 3 1 SCOP 47917 C-terminal domain of alpha and beta subunits of F1 ATP synthase
4 2 2 0 SCOP 54416 Amine oxidase N-terminal region
4 3 3 1 SCOP 57933 TAZ domain
4 4 2 1 SCOP 110217 DNA-binding protein LAG-1 (CSL)
4 4 4 1 SCOP 69340 C-terminal domain of adenylylcyclase associated protein
4 4 2 1 SCOP 68993 FAT domain of focal adhesion kinase
4 4 2 1 SCOP 81327 Small-conductance potassium channel
4 3 2 1 SCOP 140383 BSD domain-like
4 4 2 0 SCOP 47005 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
4 4 4 0 SCOP 58002 Chicken cartilage matrix protein
4 4 2 0 SCOP 101790 Aminomethyltransferase beta-barrel domain
4 4 4 0 SCOP 53150 DNA repair protein MutS, domain II
4 4 2 0 SCOP 47719 p53 tetramerization domain
3 3 2 2 SCOP 51366 Ribulose-phoshate binding barrel
3 3 2 0 SCOP 54999 Ribosomal protein S10
3 3 2 1 SCOP 52166 Ribosomal protein L4
3 3 2 0 SCOP 52080 Ribosomal proteins L15p and L18e
3 3 1 3 SCOP 51658 Xylose isomerase-like
3 3 2 1 SCOP 75620 Release factor
3 3 2 0 SCOP 160369 Ribosomal protein L10-like
3 3 1 0 SCOP 51161 Trimeric LpxA-like enzymes
3 3 2 1 SCOP 55821 YrdC/RibB
3 3 2 1 SCOP 50715 Ribosomal protein L25-like
3 2 2 1 SCOP 55205 EPT/RTPC-like
3 2 2 1 SCOP 55298 YjgF-like
3 3 2 0 SCOP 55129 Ribosomal protein L30p/L7e
3 3 3 1 SCOP 48256 Citrate synthase
3 3 3 1 SCOP 69500 DTD-like
3 3 2 0 SCOP 140718 Mediator hinge subcomplex-like
3 3 2 1 SCOP 81406 Mitochondrial cytochrome c oxidase subunit IV
3 3 2 2 SCOP 54506 Diaminopimelate epimerase-like
3 3 3 1 SCOP 53774 Glutaminase/Asparaginase
3 3 1 2 SCOP 90096 Subunits of heterodimeric actin filament capping protein Capz
3 3 1 0 SCOP 51306 LexA/Signal peptidase
3 3 3 2 SCOP 52972 ITPase-like
3 3 1 1 SCOP 140959 Indolic compounds 2,3-dioxygenase-like
3 3 1 1 SCOP 118203 Vacuolar ATP synthase subunit C
3 3 2 1 SCOP 82282 Homocysteine S-methyltransferase
3 3 3 1 SCOP 56529 FAH
3 3 2 1 SCOP 55159 eIF1-like
3 3 1 1 SCOP 55770 Profilin (actin-binding protein)
3 3 2 0 SCOP 69118 AhpD-like
3 3 1 1 SCOP 53795 PEP carboxykinase-like
3 3 3 1 SCOP 56349 DNA breaking-rejoining enzymes
3 3 1 1 SCOP 54913 GlnB-like
3 3 2 0 SCOP 54736 ClpS-like
3 3 1 1 SCOP 49472 Transthyretin (synonym: prealbumin)
3 3 2 0 SCOP 110069 ApaG-like
3 3 3 1 SCOP 52335 Methylglyoxal synthase-like
3 3 2 2 SCOP 50486 FMT C-terminal domain-like
3 3 3 0 SCOP 75011 3-carboxy-cis,cis-mucoante lactonizing enzyme
3 3 2 1 SCOP 52309 N-(deoxy)ribosyltransferase-like
3 3 3 0 SCOP 82704 AlbA-like
3 3 1 1 SCOP 89124 Nop domain
3 3 2 1 SCOP 143437 THUMP domain-like
3 3 3 0 SCOP 46589 tRNA-binding arm
3 3 3 1 SCOP 56512 Nitric oxide (NO) synthase oxygenase domain
3 3 3 0 SCOP 55103 FAD-linked oxidases, C-terminal domain
3 3 2 0 SCOP 141255 YccV-like
3 3 3 1 SCOP 142921 WGR domain-like
3 3 3 1 SCOP 56719 Type II DNA topoisomerase
3 3 1 1 SCOP 52935 PK C-terminal domain-like
3 3 1 1 SCOP 68923 PEP carboxykinase N-terminal domain
3 3 2 1 SCOP 50621 Alanine racemase C-terminal domain-like
3 3 2 1 SCOP 110019 ERO1-like
3 3 3 1 SCOP 54665 CO dehydrogenase molybdoprotein N-domain-like
3 3 3 1 SCOP 55447 CO dehydrogenase flavoprotein C-terminal domain-like
3 3 3 0 SCOP 117289 Nucleoporin domain
3 3 1 1 SCOP 55637 Cell cycle regulatory proteins
3 3 3 1 SCOP 47741 CO dehydrogenase ISP C-domain like
3 2 2 1 SCOP 55116 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
3 3 2 1 SCOP 81624 N-terminal domain of MutM-like DNA repair proteins
3 3 2 0 SCOP 47807 5' to 3' exonuclease, C-terminal subdomain
3 3 2 0 SCOP 111357 Mitochondrial ATP synthase coupling factor 6
3 3 2 1 SCOP 69203 Nucleoplasmin-like core domain
3 3 3 1 SCOP 69000 FAD-dependent thiol oxidase
3 3 2 1 SCOP 47396 Transcription factor IIA (TFIIA), alpha-helical domain
3 3 3 3 SCOP 158573 GINS helical bundle-like
3 3 2 0 SCOP 81419 Mitochondrial cytochrome c oxidase subunit VIIa
3 2 2 1 SCOP 49303 beta-Galactosidase/glucuronidase domain
3 3 3 0 SCOP 50084 Myosin S1 fragment, N-terminal domain
3 3 3 1 SCOP 140864 TROVE domain-like
3 3 2 1 SCOP 140856 USP8 N-terminal domain-like
3 3 2 1 SCOP 101233 PWI domain
3 3 1 1 SCOP 109925 Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain
3 3 2 0 SCOP 64546 Satiety factor CART (cocaine and amphetamine regulated transcript)
3 3 3 1 SCOP 58010 Fibrinogen coiled-coil and central regions
3 3 1 0 SCOP 57055 Agouti-related protein
3 3 3 1 SCOP 117018 ATP-dependent DNA ligase DNA-binding domain
3 3 3 1 SCOP 143885 RGC domain-like
3 3 3 1 SCOP 102848 NSFL1 (p97 ATPase) cofactor p47, SEP domain
3 3 1 0 SCOP 160527 V-type ATPase subunit E-like
3 3 3 1 SCOP 109715 DEK C-terminal domain
3 3 3 1 SCOP 50989 Clathrin heavy-chain terminal domain
3 3 2 1 SCOP 50916 Rap30/74 interaction domains
3 3 3 1 SCOP 56741 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
3 1 1 1 SCOP 47045 RAP domain-like
3 3 2 0 SCOP 140612 EB1 dimerisation domain-like
3 3 2 1 SCOP 160219 AMPKBI-like
3 3 2 0 SCOP 161256 RILP dimerisation region
3 3 3 1 SCOP 47587 Domain of poly(ADP-ribose) polymerase
3 3 3 1 SCOP 101238 XPC-binding domain
3 3 2 0 SCOP 100957 Dimerization cofactor of HNF-1 alpha
3 3 3 1 SCOP 109880 A middle domain of Talin 1
3 3 2 0 SCOP 57953 Trimerization domain of TRAF
2 2 1 1 SCOP 47973 Ribosomal protein S7
2 2 2 0 SCOP 46911 Ribosomal protein S18
2 2 2 0 SCOP 54843 Ribosomal protein L22
2 2 2 1 SCOP 54686 Ribosomal protein L16p/L10e
2 2 1 1 SCOP 50193 Ribosomal protein L14
2 2 1 1 SCOP 103491 Preprotein translocase SecY subunit
2 1 1 0 SCOP 56214 4'-phosphopantetheinyl transferase
2 2 2 1 SCOP 50324 Inorganic pyrophosphatase
2 2 1 1 SCOP 52161 Ribosomal protein L13
2 2 1 1 SCOP 51351 Triosephosphate isomerase (TIM)
2 2 2 0 SCOP 53633 Carbamate kinase-like
2 2 2 0 SCOP 89360 HesB-like domain
2 2 2 1 SCOP 51713 tRNA-guanine transglycosylase
2 2 2 1 SCOP 52313 Ribosomal protein S2
2 2 2 1 SCOP 64005 Undecaprenyl diphosphate synthase
2 2 1 0 SCOP 82657 BolA-like
2 2 1 1 SCOP 56796 Dehydroquinate synthase-like
2 2 1 0 SCOP 48140 Ribosomal protein L19 (L19e)
2 2 2 0 SCOP 144217 CSL zinc finger
2 2 2 1 SCOP 50475 FMN-binding split barrel
2 2 1 1 SCOP 54762 Signal recognition particle alu RNA binding heterodimer, SRP9/14
2 2 1 1 SCOP 53590 Nucleoside hydrolase
2 2 2 2 SCOP 46626 Cytochrome c
2 2 2 1 SCOP 52499 Isochorismatase-like hydrolases
2 2 1 1 SCOP 81411 Mitochondrial cytochrome c oxidase subunit VIa
2 2 1 0 SCOP 63393 RNA polymerase subunits
2 2 2 1 SCOP 55248 PCD-like
2 2 2 1 SCOP 56752 D-aminoacid aminotransferase-like PLP-dependent enzymes
2 2 1 1 SCOP 47694 Cytochrome c oxidase subunit h
2 2 1 0 SCOP 53032 tRNA-intron endonuclease catalytic domain-like
2 2 1 0 SCOP 103111 Activator of Hsp90 ATPase, Aha1
2 2 1 0 SCOP 103378 2-methylcitrate dehydratase PrpD
2 1 1 1 SCOP 53800 Chelatase
2 2 1 1 SCOP 55331 Tautomerase/MIF
2 2 1 1 SCOP 54447 ssDNA-binding transcriptional regulator domain
2 2 1 1 SCOP 55154 CYTH-like phosphatases
2 2 1 1 SCOP 56762 HydB/Nqo4-like
2 2 1 1 SCOP 117856 AF0104/ALDC/Ptd012-like
2 2 1 1 SCOP 54975 Acylphosphatase/BLUF domain-like
2 2 1 1 SCOP 89028 Cobalamin adenosyltransferase-like
2 2 2 1 SCOP 89796 CoA-transferase family III (CaiB/BaiF)
2 2 1 1 SCOP 57802 Rubredoxin-like
2 2 2 1 SCOP 52242 Cobalamin (vitamin B12)-binding domain
2 2 2 1 SCOP 64076 MTH938-like
2 2 1 0 SCOP 117070 LEA14-like
2 2 2 0 SCOP 48695 Multiheme cytochromes
2 2 2 0 SCOP 160631 SMI1/KNR4-like
2 2 1 1 SCOP 46950 Double-stranded DNA-binding domain
2 2 1 1 SCOP 74784 Translin
2 2 2 1 SCOP 111321 AF1104-like
2 2 2 1 SCOP 46548 alpha-helical ferredoxin
2 2 1 0 SCOP 116820 Rps17e-like
2 2 2 1 SCOP 102462 Peptidyl-tRNA hydrolase II
2 2 1 1 SCOP 63867 MoeA C-terminal domain-like
2 2 2 1 SCOP 55895 Ribonuclease Rh-like
2 2 2 1 SCOP 158832 Tex N-terminal region-like
2 2 2 1 SCOP 56712 Prokaryotic type I DNA topoisomerase
2 2 1 0 SCOP 53706 Formate dehydrogenase/DMSO reductase, domains 1-3
2 2 2 0 SCOP 46906 Ribosomal protein L11, C-terminal domain
2 2 1 1 SCOP 160443 SMR domain-like
2 2 2 1 SCOP 49468 VHL
2 2 1 0 SCOP 118116 DNA mismatch repair protein MutL
2 2 2 0 SCOP 55658 L9 N-domain-like
2 2 1 0 SCOP 158745 LanC-like
2 2 2 2 SCOP 160059 PriA/YqbF domain
2 2 1 1 SCOP 103359 Suppressor of Fused, N-terminal domain
2 2 2 0 SCOP 49373 Invasin/intimin cell-adhesion fragments
2 2 2 0 SCOP 58014 Coiled-coil domain of nucleotide exchange factor GrpE
2 2 2 0 SCOP 141673 MOSC N-terminal domain-like
2 2 2 0 SCOP 142984 Nqo1 middle domain-like
2 2 1 0 SCOP 51110 alpha-D-mannose-specific plant lectins
2 2 2 0 SCOP 101967 Adhesin YadA, collagen-binding domain
2 2 2 1 SCOP 52021 Carbamoyl phosphate synthetase, small subunit N-terminal domain
2 2 1 1 SCOP 53920 Fe-only hydrogenase
2 1 1 0 SCOP 54810 GMP synthetase C-terminal dimerisation domain
2 2 1 0 SCOP 110836 Hypothetical protein SAV1430
2 2 1 1 SCOP 101887 Apyrase
2 2 2 1 SCOP 49998 Amine oxidase catalytic domain
2 2 1 1 SCOP 63882 MoeA N-terminal region -like
2 2 2 1 SCOP 101278 N-terminal domain of adenylylcyclase associated protein, CAP
2 2 1 0 SCOP 47794 Rad51 N-terminal domain-like
2 1 1 1 SCOP 56053 Ribosomal protein L6
2 2 2 1 SCOP 55545 beta-N-acetylhexosaminidase-like domain
2 2 2 0 SCOP 140490 Nqo1C-terminal domain-like
2 2 2 0 SCOP 144284 Sec2 N-terminal region
2 2 1 1 SCOP 56542 Substrate-binding domain of HMG-CoA reductase
2 2 2 0 SCOP 54991 Anticodon-binding domain of PheRS
2 2 2 0 SCOP 55271 DNA repair protein MutS, domain I
2 2 2 0 SCOP 110221 AbfB domain
2 2 2 1 SCOP 46596 Eukaryotic DNA topoisomerase I, dispensable insert domain
2 2 2 0 SCOP 48108 Carbamoyl phosphate synthetase, large subunit connection domain
2 2 2 1 SCOP 63600 Telomeric repeat binding factor (TRF) dimerisation domain
2 2 1 0 SCOP 54098 Prion-like
2 2 1 0 SCOP 118359 Expressed protein At2g23090/F21P24.15
2 2 1 1 SCOP 140984 PTPA-like
2 2 2 1 SCOP 82051 Obg GTP-binding protein N-terminal domain
2 2 1 1 SCOP 55481 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
2 2 1 1 SCOP 143724 PHP14-like
2 2 2 1 SCOP 46984 Smac/diablo
2 2 1 1 SCOP 88798 N-terminal, heterodimerisation domain of RBP7 (RpoE)
2 2 2 1 SCOP 111006 Dystroglycan, domain 2
2 2 1 1 SCOP 161065 ATP synthase D chain-like
2 2 1 1 SCOP 47668 N-terminal domain of cbl (N-cbl)
2 2 2 1 SCOP 81730 beta-catenin-interacting protein ICAT
2 2 1 1 SCOP 81531 Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
2 2 1 1 SCOP 143875 ERH-like
2 2 1 0 SCOP 64602 F1 ATPase inhibitor, IF1, C-terminal domain
2 2 1 1 SCOP 140361 MIT domain-like
2 2 1 1 SCOP 48479 Cytochrome c oxidase subunit E
2 2 2 1 SCOP 142019 Nqo1 FMN-binding domain-like
2 2 2 0 SCOP 57774 Microbial and mitochondrial ADK, insert "zinc finger" domain
2 2 1 0 SCOP 51269 AFP III-like domain
2 1 1 0 SCOP 56568 Non-globular alpha+beta subunits of globular proteins
2 2 2 1 SCOP 54747 Ribosomal L11/L12e N-terminal domain
2 2 2 1 SCOP 47040 Kix domain of CBP (creb binding protein)
2 2 2 1 SCOP 89942 eEF1-gamma domain
2 2 1 1 SCOP 47157 Mitochondrial import receptor subunit Tom20
2 2 2 0 SCOP 81822 RuBisCo LSMT C-terminal, substrate-binding domain
2 2 2 1 SCOP 101391 Hsp90 co-chaperone CDC37
2 2 1 1 SCOP 109775 Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
2 2 2 1 SCOP 69099 Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain
2 2 1 0 SCOP 89000 post-HMGL domain-like
2 2 2 0 SCOP 52156 Initiation factor IF2/eIF5b, domain 3
2 2 1 1 SCOP 55003 PAP/Archaeal CCA-adding enzyme, C-terminal domain
2 2 2 0 SCOP 161245 Zinc hairpin stack
2 2 1 1 SCOP 160897 Taf5 N-terminal domain-like
2 2 1 0 SCOP 64586 C-terminal domain of ProRS
2 2 2 0 SCOP 51064 Head domain of nucleotide exchange factor GrpE
2 2 2 0 SCOP 57593 Heparin-binding domain from vascular endothelial growth factor
2 2 1 0 SCOP 58069 Virus ectodomain
2 2 1 1 SCOP 55035 NAD-binding domain of HMG-CoA reductase
2 2 2 1 SCOP 101353 Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
2 2 2 1 SCOP 81502 ISP transmembrane anchor
2 2 1 1 SCOP 56553 Insert subdomain of RNA polymerase alpha subunit
2 2 2 0 SCOP 111479 Fzo-like conserved region
2 2 2 1 SCOP 101224 HAND domain of the nucleosome remodeling ATPase ISWI
2 1 1 0 SCOP 140125 Rabenosyn-5 Rab-binding domain-like
2 2 2 0 SCOP 109805 Phenylalanine zipper
2 2 2 1 SCOP 158230 PRP4-like
1 1 1 0 SCOP 161098 MetI-like
1 1 1 1 SCOP 53790 Tetrapyrrole methylase
1 1 1 1 SCOP 53178 Peptidyl-tRNA hydrolase-like
1 1 1 0 SCOP 56420 Peptide deformylase
1 1 1 1 SCOP 89919 Ribosome-binding factor A, RbfA
1 1 1 0 SCOP 54570 Ribosomal protein S19
1 1 1 1 SCOP 55282 RL5-like
1 1 1 1 SCOP 56047 Ribosomal protein S8
1 1 1 0 SCOP 57840 Ribosomal protein L36
1 1 1 1 SCOP 64263 Prokaryotic ribosomal protein L17
1 1 1 0 SCOP 64182 DHH phosphoesterases
1 1 1 0 SCOP 143034 L35p-like
1 1 1 0 SCOP 74731 Ribosomal protein L20
1 1 1 1 SCOP 55831 Thymidylate synthase/dCMP hydroxymethylase
1 1 1 1 SCOP 53597 Dihydrofolate reductase-like
1 1 1 0 SCOP 141091 L21p-like
1 1 1 0 SCOP 143800 L28p-like
1 1 1 1 SCOP 53748 Phosphoglycerate kinase
1 1 1 1 SCOP 82549 DAK1/DegV-like
1 1 1 1 SCOP 75625 YebC-like
1 1 1 1 SCOP 82649 SufE/NifU
1 1 1 1 SCOP 52943 ATP synthase (F1-ATPase), gamma subunit
1 1 1 1 SCOP 55068 Peptide methionine sulfoxide reductase
1 1 1 0 SCOP 55194 Ribosome recycling factor, RRF
1 1 1 0 SCOP 54565 Ribosomal protein S16
1 1 1 1 SCOP 51283 dUTPase-like
1 1 1 1 SCOP 56770 HydA/Nqo6-like
1 1 1 1 SCOP 56276 S-adenosylmethionine decarboxylase
1 1 1 0 SCOP 102705 NIF3 (NGG1p interacting factor 3)-like
1 1 1 0 SCOP 46561 Ribosomal protein L29 (L29p)
1 1 1 0 SCOP 54995 Ribosomal protein S6
1 1 1 0 SCOP 52042 Ribosomal protein L32e
1 1 1 0 SCOP 55469 FMN-dependent nitroreductase-like
1 1 1 0 SCOP 141678 MAL13P1.257-like
1 1 1 0 SCOP 54575 Ribosomal protein L31e
1 1 1 0 SCOP 103464 Oligosaccharyltransferase subunit ost4p
1 1 1 1 SCOP 102886 Coproporphyrinogen III oxidase
1 1 1 1 SCOP 51726 UROD/MetE-like
1 1 1 1 SCOP 142897 TFB5-like
1 1 1 0 SCOP 103456 Preprotein translocase SecE subunit
1 1 1 1 SCOP 56634 Heme-dependent catalase-like
1 1 1 1 SCOP 81524 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 57798 Casein kinase II beta subunit
1 1 1 0 SCOP 111278 SSo0622-like
1 1 1 0 SCOP 159468 AtpF-like
1 1 1 0 SCOP 81514 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 1 SCOP 57868 Metallothionein
1 1 1 0 SCOP 89895 FYSH domain
1 1 1 1 SCOP 81508 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
1 1 1 0 SCOP 48662 Ribosomal protein L39e
1 1 1 1 SCOP 110849 ParB/Sulfiredoxin
1 1 1 0 SCOP 81343 Fumarate reductase respiratory complex transmembrane subunits
1 1 1 1 SCOP 69060 Arp2/3 complex 21 kDa subunit ARPC3
1 1 1 0 SCOP 103486 V-type ATP synthase subunit C
1 1 1 0 SCOP 143870 PF0523-like
1 1 1 1 SCOP 46924 RNA polymerase subunit RPB10
1 1 1 1 SCOP 46988 Tubulin chaperone cofactor A
1 1 1 1 SCOP 69618 HemD-like
1 1 1 0 SCOP 143447 AMMECR1-like
1 1 1 0 SCOP 48690 Epsilon subunit of mitochondrial F1F0-ATP synthase
1 1 1 1 SCOP 52788 Phosphotyrosine protein phosphatases I
1 1 1 1 SCOP 63562 RPB6/omega subunit-like
1 1 1 1 SCOP 101546 ASF1-like
1 1 1 1 SCOP 55040 Molybdenum cofactor biosynthesis protein C, MoaC
1 1 1 0 SCOP 143243 Nqo5-like
1 1 1 0 SCOP 51717 Dihydropteroate synthetase-like
1 1 1 1 SCOP 51998 PFL-like glycyl radical enzymes
1 1 1 0 SCOP 55724 Mog1p/PsbP-like
1 1 1 0 SCOP 64438 CNF1/YfiH-like putative cysteine hydrolases
1 1 1 0 SCOP 52255 N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
1 1 1 0 SCOP 82771 GIY-YIG endonuclease
1 1 1 0 SCOP 82697 PurS-like
1 1 1 1 SCOP 56524 Oxidoreductase molybdopterin-binding domain
1 1 1 1 SCOP 46767 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1 1 1 0 SCOP 101744 Rof/RNase P subunit-like
1 1 1 0 SCOP 89550 PHP domain-like
1 1 1 1 SCOP 89733 L-sulfolactate dehydrogenase-like
1 1 1 1 SCOP 52507 Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
1 1 1 0 SCOP 54690 Molybdopterin synthase subunit MoaE
1 1 1 0 SCOP 141000 Glu-tRNAGln amidotransferase C subunit
1 1 1 1 SCOP 103365 Hypothetical protein PH1602
1 1 1 0 SCOP 143081 BB1717-like
1 1 1 0 SCOP 158997 Trm112p-like
1 1 1 1 SCOP 82544 GckA/TtuD-like
1 1 1 0 SCOP 89095 GatB/YqeY motif
1 1 1 0 SCOP 109910 YgfY-like
1 1 1 1 SCOP 158694 UraD-Like
1 1 1 1 SCOP 110916 Peptidyl-tRNA hydrolase domain-like
1 1 1 0 SCOP 55826 YbaK/ProRS associated domain
1 1 1 0 SCOP 102588 LmbE-like
1 1 1 1 SCOP 160909 ATP12-like
1 1 1 1 SCOP 101386 all-alpha NTP pyrophosphatases
1 1 1 0 SCOP 56747 Prim-pol domain
1 1 1 1 SCOP 110581 Indigoidine synthase A-like
1 1 1 1 SCOP 54814 Prokaryotic type KH domain (KH-domain type II)
1 1 1 0 SCOP 140931 Fic-like
1 1 1 0 SCOP 101262 Methenyltetrahydrofolate cyclohydrolase-like
1 1 1 1 SCOP 56507 Methionine synthase activation domain-like
1 1 1 1 SCOP 51703 Cobalamin (vitamin B12)-dependent enzymes
1 1 1 1 SCOP 101473 DhaL-like
1 1 1 1 SCOP 111326 Urocanase
1 1 1 0 SCOP 159659 Cgl1923-like
1 1 1 0 SCOP 69786 YggU-like
1 1 1 0 SCOP 81593 Nucleotidyltransferase substrate binding subunit/domain
1 1 1 1 SCOP 110395 CutC-like
1 1 1 1 SCOP 160920 PSTPO5379-like
1 1 1 0 SCOP 102546 RbsD-like
1 1 1 0 SCOP 160350 Rnp2-like
1 1 1 1 SCOP 54984 eEF-1beta-like
1 1 1 0 SCOP 69819 MTH1598-like
1 1 1 0 SCOP 160374 RplX-like
1 1 1 1 SCOP 69695 SRP19
1 1 1 1 SCOP 69864 Argininosuccinate synthetase, C-terminal domain
1 1 1 0 SCOP 53244 MurD-like peptide ligases, peptide-binding domain
1 1 1 0 SCOP 50960 TolB, C-terminal domain
1 1 1 1 SCOP 82114 Riboflavin kinase-like
1 1 1 1 SCOP 102645 CoaB-like
1 1 1 0 SCOP 48230 Chondroitin AC/alginate lyase
1 1 1 0 SCOP 49344 CBD9-like
1 1 1 0 SCOP 103190 Sensory domain-like
1 1 1 0 SCOP 54821 Ribosomal protein S3 C-terminal domain
1 1 1 0 SCOP 58064 Influenza hemagglutinin (stalk)
1 1 1 0 SCOP 47789 C-terminal domain of RNA polymerase alpha subunit
1 1 1 1 SCOP 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain
1 1 1 1 SCOP 144206 NOB1 zinc finger-like
1 1 1 1 SCOP 55816 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
1 1 1 0 SCOP 55190 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
1 1 1 0 SCOP 56037 PheT/TilS domain
1 1 1 1 SCOP 52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
1 1 1 0 SCOP 75704 Mitotic arrest deficient-like 1, Mad1
1 1 1 1 SCOP 63999 Thiamin pyrophosphokinase, catalytic domain
1 1 1 0 SCOP 58022 XRCC4, C-terminal oligomerization domain
1 1 1 1 SCOP 54719 Fe,Mn superoxide dismutase (SOD), C-terminal domain
1 1 1 0 SCOP 48163 An anticodon-binding domain of class I aminoacyl-tRNA synthetases
1 1 1 1 SCOP 110111 Ctag/Cox11
1 1 1 0 SCOP 49363 Purple acid phosphatase, N-terminal domain
1 1 1 1 SCOP 53623 MurD-like peptide ligases, catalytic domain
1 1 1 1 SCOP 81891 Poly A polymerase C-terminal region-like
1 1 1 1 SCOP 56425 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
1 1 1 0 SCOP 143548 Serine metabolism enzymes domain
1 1 1 0 SCOP 46977 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
1 1 1 0 SCOP 47364 Domain of the SRP/SRP receptor G-proteins
1 1 1 0 SCOP 48300 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
1 1 1 0 SCOP 47144 HSC20 (HSCB), C-terminal oligomerisation domain
1 1 1 0 SCOP 47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
1 1 1 0 SCOP 46604 Epsilon subunit of F1F0-ATP synthase C-terminal domain
1 1 1 0 SCOP 53155 Methylated DNA-protein cysteine methyltransferase domain
1 1 1 1 SCOP 69979 Eea1 homodimerisation domain
1 1 1 0 SCOP 52413 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
1 1 1 0 SCOP 54782 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
1 1 1 0 SCOP 54680 Pyrimidine nucleoside phosphorylase C-terminal domain
1 1 1 0 SCOP 54675 Nicotinate/Quinolinate PRTase N-terminal domain-like
1 1 1 1 SCOP 47446 Signal peptide-binding domain
1 1 1 1 SCOP 116742 eIF2alpha middle domain-like
1 1 1 0 SCOP 47928 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1 1 1 1 SCOP 69761 GTP cyclohydrolase I feedback regulatory protein, GFRP
1 1 1 1 SCOP 89817 Mago nashi protein
1 1 1 1 SCOP 47798 Barrier-to-autointegration factor, BAF
1 1 1 0 SCOP 81415 Mitochondrial cytochrome c oxidase subunit VIc
1 1 1 0 SCOP 81423 Mitochondrial cytochrome c oxidase subunit VIIb
1 1 1 0 SCOP 47938 Functional domain of the splicing factor Prp18
1 1 1 1 SCOP 50723 Core binding factor beta, CBF
1 1 1 0 SCOP 55044 TRADD, N-terminal domain
1 1 1 1 SCOP 158639 ENT-like
1 1 1 1 SCOP 75001 Dipeptidyl peptidase I (cathepsin C), exclusion domain
1 1 1 1 SCOP 63707 Ganglioside M2 (gm2) activator
1 1 1 1 SCOP 140102 ISY1 domain-like
1 1 1 0 SCOP 89890 Proguanylin
1 1 1 0 SCOP 140106 Calcyclin-binding protein-like
1 1 1 0 SCOP 54076 RNase A-like
1 1 1 1 SCOP 63697 Olfactory marker protein
1 1 1 0 SCOP 55261 GAD domain-like
1 1 1 1 SCOP 110083 Peptidylarginine deiminase Pad4, middle domain
1 1 1 1 SCOP 54529 Mitochondrial glycoprotein MAM33-like
1 1 1 0 SCOP 54713 Elongation factor Ts (EF-Ts), dimerisation domain
1 1 1 0 SCOP 57283 PMP inhibitors
1 1 1 1 SCOP 46609 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1 1 1 1 SCOP 110993 eIF-2-alpha, C-terminal domain
1 1 1 0 SCOP 48168 R1 subunit of ribonucleotide reductase, N-terminal domain
1 1 1 1 SCOP 82215 C-terminal autoproteolytic domain of nucleoporin nup98
1 1 1 1 SCOP 50784 Transcription factor IIA (TFIIA), beta-barrel domain
1 1 1 0 SCOP 53036 Eukaryotic RPB5 N-terminal domain
1 1 1 1 SCOP 47212 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
1 1 1 1 SCOP 90073 GCM domain
1 1 1 1 SCOP 81382 Skp1 dimerisation domain-like
1 1 1 1 SCOP 82931 Tumor suppressor gene product Apc
1 1 1 0 SCOP 140427 VPS28 C-terminal domain-like
1 1 1 1 SCOP 81872 BRCA2 helical domain
1 1 1 0 SCOP 159065 Dom34/Pelota N-terminal domain-like
1 1 1 0 SCOP 101931 Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain
1 1 1 1 SCOP 159042 Plus3-like
1 1 1 1 SCOP 88802 Pre-PUA domain
1 1 1 1 SCOP 63862 Thiamin pyrophosphokinase, substrate-binding domain
1 1 1 1 SCOP 102860 mRNA decapping enzyme DcpS N-terminal domain
1 1 1 1 SCOP 101420 C-terminal domain of Ku80
1 1 1 0 SCOP 116878 TrmE connector domain
1 1 1 1 SCOP 160651 FLJ32549 C-terminal domain-like
1 1 1 0 SCOP 140586 Dcp2 domain-like
1 1 1 0 SCOP 57944 Triple coiled coil domain of C-type lectins
1 1 1 0 SCOP 75445 D-ribose-5-phosphate isomerase (RpiA), lid domain
1 1 1 1 SCOP 109779 Domain from hypothetical 2610208m17rik protein
1 1 1 0 SCOP 81496 Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
1 1 1 1 SCOP 63433 Fumarylacetoacetate hydrolase, FAH, N-terminal domain
1 1 1 1 SCOP 47644 Methionine synthase domain
1 1 1 0 SCOP 101821 Aminopeptidase/glucanase lid domain
1 1 1 0 SCOP 54364 Translation initiation factor IF3, N-terminal domain
1 1 1 0 SCOP 81767 Pre-protein crosslinking domain of SecA
1 1 1 0 SCOP 81799 Putative methyltransferase TM0872, insert domain
1 1 1 0 SCOP 58050 N-terminal coiled coil domain from apc
1 1 1 1 SCOP 69036 Bcr-Abl oncoprotein oligomerization domain
1 1 1 0 SCOP 49594 Rab geranylgeranyltransferase alpha-subunit, insert domain
1 1 1 1 SCOP 160088 NRDP1 C-terminal domain-like
1 1 1 0 SCOP 109732 HBS1-like domain
1 1 1 0 SCOP 47055 TAF(II)230 TBP-binding fragment
1 1 1 0 SCOP 109728 Hypothetical protein AF0491, middle domain
1 1 1 1 SCOP 46915 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
1 1 1 0 SCOP 109736 FGAM synthase PurL, linker domain
1 1 1 0 SCOP 57770 Methionyl-tRNA synthetase (MetRS), Zn-domain
1 1 1 0 SCOP 52913 RNA 3'-terminal phosphate cyclase, RPTC, insert domain
1 1 1 1 SCOP 81878 BRCA2 tower domain
1 1 1 0 SCOP 81783 C-terminal domain of DFF45/ICAD (DFF-C domain)
1 1 1 0 SCOP 90234 Zinc finger domain of DNA polymerase-alpha
1 1 1 1 SCOP 101283 GRIP domain
1 1 1 1 SCOP 111469 Geminin coiled-coil domain
1 1 1 1 SCOP 140576 HIV integrase-binding domain
1 1 1 1 SCOP 158548 FLJ32549 domain-like

Jump to [ Top of page · Assignment statistics ]


The following superfamilies have one or more weak hits:

SCOP superfamily Dimerization motif of sir4
SCOP superfamily Hypothetical protein YjiA, C-terminal domain
SCOP superfamily MTH1187/YkoF-like
SCOP superfamily DNA-binding protein Tfx
SCOP superfamily Dodecin-like
SCOP superfamily RraA-like
SCOP superfamily AbrB/MazE/MraZ-like
SCOP superfamily TorD-like
SCOP superfamily Sigma2 domain of RNA polymerase sigma factors
SCOP superfamily Positive stranded ssRNA viruses
SCOP superfamily Apolipoprotein A-II
SCOP superfamily Apical membrane antigen 1
SCOP superfamily N-utilization substance G protein NusG, N-terminal domain
SCOP superfamily YbaB-like
SCOP superfamily Heme chaperone CcmE
SCOP superfamily BAH domain
SCOP superfamily Double Clp-N motif
SCOP superfamily Family 10 polysaccharide lyase
SCOP superfamily a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
SCOP superfamily F1F0 ATP synthase subunit B, membrane domain
SCOP superfamily Photosystem I reaction center subunit XI, PsaL
SCOP superfamily Bacterial photosystem II reaction centre, L and M subunits
SCOP superfamily Bacterial ba3 type cytochrome c oxidase subunit IIa
SCOP superfamily Cytochrome c oxidase subunit II-like, transmembrane region
SCOP superfamily Cytochrome c oxidase subunit III-like
SCOP superfamily Cytochrome c oxidase subunit I-like
SCOP superfamily ABC transporter involved in vitamin B12 uptake, BtuC
SCOP superfamily Transmembrane di-heme cytochromes
SCOP superfamily Gated mechanosensitive channel
SCOP superfamily C-terminal domain of mollusc hemocyanin
SCOP superfamily Rad50 coiled-coil Zn hook
SCOP superfamily Chemotaxis phosphatase CheZ
SCOP superfamily YhbC-like, N-terminal domain
SCOP superfamily DsrEFH-like
SCOP superfamily Variable surface antigen VlsE
SCOP superfamily Head and neck region of the ectodomain of NDV fusion glycoprotein
SCOP superfamily DsrC, the gamma subunit of dissimilatory sulfite reductase
SCOP superfamily DNA-binding C-terminal domain of the transcription factor MotA
SCOP superfamily Cell wall binding repeat
SCOP superfamily Phage fibre proteins
SCOP superfamily Alpha subunit of glutamate synthase, C-terminal domain
SCOP superfamily Tricorn protease N-terminal domain
SCOP superfamily Quinohemoprotein amine dehydrogenase C chain
SCOP superfamily Glutamyl tRNA-reductase dimerization domain
SCOP superfamily RecG, N-terminal domain
SCOP superfamily Phase 1 flagellin
SCOP superfamily Hsp33 domain
SCOP superfamily Precorrin-8X methylmutase CbiC/CobH
SCOP superfamily PTS-regulatory domain, PRD
SCOP superfamily Outer surface protein C (OspC)
SCOP superfamily Bacterial hemolysins
SCOP superfamily Clostridium neurotoxins, "coiled-coil" domain
SCOP superfamily Variant surface glycoprotein (N-terminal domain)
SCOP superfamily Outer membrane lipoprotein
SCOP superfamily Rotavirus nonstructural proteins
SCOP superfamily Coiled-coil dimerization domain from cortexillin I
SCOP superfamily Ada DNA repair protein, N-terminal domain (N-Ada 10)
SCOP superfamily Zn2/Cys6 DNA-binding domain
SCOP superfamily Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
SCOP superfamily HIPIP (high potential iron protein)
SCOP superfamily Type X cellulose binding domain, CBDX
SCOP superfamily Neurotoxin III (ATX III)
SCOP superfamily Defensin-like
SCOP superfamily Anthrax protective antigen
SCOP superfamily Leukocidin-like
SCOP superfamily Outer membrane efflux proteins (OEP)
SCOP superfamily Porins
SCOP superfamily Reovirus inner layer core protein p3
SCOP superfamily Prismane protein-like
SCOP superfamily DNA primase core
SCOP superfamily Conserved core of transcriptional regulatory protein vp16
SCOP superfamily Nitrile hydratase alpha chain
SCOP superfamily Methenyltetrahydromethanopterin cyclohydrolase
SCOP superfamily beta-lactamase-inhibitor protein, BLIP
SCOP superfamily Homing endonucleases
SCOP superfamily Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
SCOP superfamily YcfA/nrd intein domain
SCOP superfamily RecA protein, C-terminal domain
SCOP superfamily Chalcone isomerase
SCOP superfamily Superantigen toxins, C-terminal domain
SCOP superfamily MoaD/ThiS
SCOP superfamily "Helical backbone" metal receptor
SCOP superfamily Resolvase-like
SCOP superfamily Methylesterase CheB, C-terminal domain
SCOP superfamily Barstar-related
SCOP superfamily Malate synthase G
SCOP superfamily Duplicated hybrid motif
SCOP superfamily Mannose-binding lectins
SCOP superfamily C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
SCOP superfamily Oncogene products
SCOP superfamily Avidin/streptavidin
SCOP superfamily Herpes virus serine proteinase, assemblin
SCOP superfamily STI-like
SCOP superfamily Ecotin, trypsin inhibitor
SCOP superfamily alpha-Amylase inhibitor tendamistat
SCOP superfamily Cna protein B-type domain
SCOP superfamily Cytochrome f, large domain
SCOP superfamily Chorismate mutase II
SCOP superfamily Bacterial muramidases
SCOP superfamily TrpR-like
SCOP superfamily Influenza virus matrix protein M1
SCOP superfamily LigA subunit of an aromatic-ring-opening dioxygenase LigAB
SCOP superfamily Hemocyanin, N-terminal domain
SCOP superfamily FliG
SCOP superfamily Apolipophorin-III
SCOP superfamily Hepatitis B viral capsid (hbcag)
SCOP superfamily Retroviral matrix proteins
SCOP superfamily Chemotaxis receptor methyltransferase CheR, N-terminal domain
SCOP superfamily IHF-like DNA-binding proteins
SCOP superfamily Domain of early E2A DNA-binding protein, ADDBP
SCOP superfamily Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
SCOP superfamily Insect pheromone/odorant-binding proteins
SCOP superfamily Ectatomin subunits
SCOP superfamily ROP protein
SCOP superfamily Histidine-containing phosphotransfer domain, HPT domain
SCOP superfamily Hemerythrin-like
SCOP superfamily Cytochromes
SCOP superfamily Apolipoprotein
SCOP superfamily Methane monooxygenase hydrolase, gamma subunit
SCOP superfamily Bacterial immunoglobulin/albumin-binding domains
SCOP superfamily Ribosomal protein S20
SCOP superfamily Enzyme IIa from lactose specific PTS, IIa-lac
SCOP superfamily C-terminal effector domain of the bipartite response regulators
SCOP superfamily PspA lactotransferrin-binding region
SCOP superfamily Gam-like
SCOP superfamily T-antigen specific domain-like
SCOP superfamily E6 C-terminal domain-like
SCOP superfamily CHY zinc finger-like
SCOP superfamily YfgJ-like
SCOP superfamily ATP synthase B chain-like
SCOP superfamily Photosystem II reaction center protein M, PsbM
SCOP superfamily flu NP-like
SCOP superfamily CV3147-like
SCOP superfamily AF1531-like
SCOP superfamily PH0156-like
SCOP superfamily VPA0735-like
SCOP superfamily FlhC-like
SCOP superfamily YonK-like
SCOP superfamily EscU C-terminal domain-like
SCOP superfamily YueI-like
SCOP superfamily BLRF2-like
SCOP superfamily MTH889-like
SCOP superfamily EspE N-terminal domain-like
SCOP superfamily YcgL-like
SCOP superfamily NSP3A-like
SCOP superfamily XkdW-like
SCOP superfamily CdCA1 repeat-like
SCOP superfamily TBP-interacting protein-like
SCOP superfamily Lipase chaperone-like
SCOP superfamily PMT central region-like
SCOP superfamily AGR C 984p-like
SCOP superfamily MgtE N-terminal domain-like
SCOP superfamily Sama2622-like
SCOP superfamily BH3980-like
SCOP superfamily DsbB-like
SCOP superfamily HP0062-like
SCOP superfamily MPN010-like
SCOP superfamily Coronavirus NSP10-like
SCOP superfamily Heme iron utilization protein-like
SCOP superfamily FdhE-like
SCOP superfamily YojJ-like
SCOP superfamily VC0467-like
SCOP superfamily TTP0101/SSO1404-like
SCOP superfamily Transposase IS200-like
SCOP superfamily YktB/PF0168-like
SCOP superfamily PhtA domain-like
SCOP superfamily At5g01610-like
SCOP superfamily L,D-transpeptidase catalytic domain-like
SCOP superfamily YdhA-like
SCOP superfamily Extracellular hemoglobin linker subunit, receptor domain
SCOP superfamily TM0957-like
SCOP superfamily Agglutinin HPA-like
SCOP superfamily Topoisomerase V catalytic domain-like
SCOP superfamily Duffy binding domain-like
SCOP superfamily PriB N-terminal domain-like
SCOP superfamily Pseudo ankyrin repeat-like
SCOP superfamily SipA N-terminal domain-like
SCOP superfamily AF0941-like
SCOP superfamily IpaD-like
SCOP superfamily Hyaluronidase post-catalytic domain-like
SCOP superfamily EF2947-like
SCOP superfamily MukF C-terminal domain-like
SCOP superfamily FlgN-like
SCOP superfamily FHV B2 protein-like
SCOP superfamily BAS1536-like
SCOP superfamily HP1531-like
SCOP superfamily EsxAB dimer-like
SCOP superfamily EF2458-like
SCOP superfamily Vng1086c-like
SCOP superfamily Coronavirus NSP7-like
SCOP superfamily MxiH-like
SCOP superfamily SPy1572-like
SCOP superfamily YbjQ-like
SCOP superfamily Flagellar hook protein flgE
SCOP superfamily Hypothetical protein PA1324
SCOP superfamily Accessory protein X4 (ORF8, ORF7a)
SCOP superfamily Hypothetical protein YqbG
SCOP superfamily Avirulence protein AvrPto
SCOP superfamily XseB-like
SCOP superfamily DNA-binding domain of EIN3-like
SCOP superfamily Coronavirus S2 glycoprotein
SCOP superfamily OmpH-like
SCOP superfamily VP4 membrane interaction domain
SCOP superfamily HlyD-like secretion proteins
SCOP superfamily Tsx-like channel
SCOP superfamily CbiD-like
SCOP superfamily Recombination protein RecR
SCOP superfamily Putative modulator of DNA gyrase, PmbA/TldD
SCOP superfamily Her-1
SCOP superfamily Triger factor/SurA peptide-binding domain-like
SCOP superfamily PhoU-like
SCOP superfamily KorB DNA-binding domain-like
SCOP superfamily Sec-C motif
SCOP superfamily Chlorophyll a-b binding protein
SCOP superfamily Respiratory nitrate reductase 1 gamma chain
SCOP superfamily Major capsid protein VP5
SCOP superfamily Creatininase
SCOP superfamily NAC domain
SCOP superfamily Hydrophobin II, HfbII
SCOP superfamily Hypothetical protein YfhH
SCOP superfamily Oxygen-evolving enhancer protein 3,
SCOP superfamily Staphylocoagulase
SCOP superfamily Typo IV secretion system protein TraC
SCOP superfamily Chemosensory protein Csp2

Jump to [ Top of page · Assignment statistics ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.